RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 537021.9.peg.166_1
         (38 letters)



>d1h7na_ c.1.10.3 (A:) 5-aminolaevulinate dehydratase, ALAD
           (porphobilinogen synthase) {Baker's yeast (Saccharomyces
           cerevisiae) [TaxId: 4932]}
          Length = 340

 Score = 22.6 bits (48), Expect = 8.4
 Identities = 6/38 (15%), Positives = 12/38 (31%), Gaps = 1/38 (2%)

Query: 1   MMLRMFMLQIIFSKEFFII-PLLQFLDEILDVKNNFGG 37
           +  R     +    +  I+ P   +LD + D       
Sbjct: 244 LARRALERDMSEGADGIIVKPSTFYLDIMRDASEICKD 281


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.343    0.159    0.465 

Gapped
Lambda     K      H
   0.267   0.0673    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 149,144
Number of extensions: 3966
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 2
Length of query: 38
Length of database: 2,407,596
Length adjustment: 11
Effective length of query: 27
Effective length of database: 2,256,566
Effective search space: 60927282
Effective search space used: 60927282
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (22.0 bits)
S2: 47 (22.0 bits)