Query         537021.9.peg.191_1
Match_columns 44
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 33803
Date          Tue May 24 18:23:27 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_191.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >1e5r_A Proline oxidase; oxido  13.4      66  0.0019   15.6   0.7   21   11-31     21-41  (97)
  2 >3e7j_A Heparinase II protein;  10.6 1.2E+02  0.0036   14.3   1.4   14   26-39     13-26  (92)
  3 >3dwl_E Actin-related protein    6.6 2.3E+02  0.0068   12.9   2.4   37    2-38     43-81  (174)
  4 >1v54_A Cytochrome C oxidase p   5.3 2.7E+02   0.008   12.5   1.2   15   19-33      7-26  (89)
  5 >1k8k_E P21, ARP2/3 complex 21   5.1 2.9E+02  0.0085   12.4   1.7   37    2-38     41-79  (178)
  6 >3f2b_A DNA-directed DNA polym   4.6 2.6E+02  0.0076   12.7   0.6   19   12-30      9-29  (80)
  7 >3kj0_B BCL-2-like protein 11;   4.5 2.8E+02  0.0084   12.4   0.8   10   29-38      6-15  (27)
  8 >1nvm_A HOA, 4-hydroxy-2-oxova   4.2 3.4E+02    0.01   12.1   2.8   34    5-38     17-50  (72)
  9 >1pyo_B Caspase-2; apoptosis,    3.6 3.4E+02    0.01   12.0   0.6    6   32-37     38-43  (105)
 10 >1nj1_A Proline-tRNA synthetas   3.6 3.9E+02   0.011   11.8   1.1    9   29-37     40-48  (87)

No 1  
>>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} (A:194-290)
Probab=13.38  E-value=66  Score=15.55  Aligned_cols=21  Identities=43%  Similarity=0.716  Sum_probs=17.5

Q ss_pred             HHHHHHHHHHEEEHHHHHHHH
Q ss_conf             999533766423157778888
Q 537021.9.peg.1   11 KLLSFGFVLLSINCRDIIFSI   31 (44)
Q Consensus        11 kllsfgfvllsincrdiifsi   31 (44)
                      .+++++-|.--.|-|||.|-.
T Consensus        21 ~IlalS~visr~NfRdIvf~L   41 (97)
T 1e5r_A           21 RILSLGQVIERENFRDILFLL   41 (97)
T ss_dssp             HHHGGGGTCCTTTHHHHHHHH
T ss_pred             HHHHHHCCCCCCHHHHHHHHH
T ss_conf             998651201233177899998


No 2  
>>3e7j_A Heparinase II protein; alpha and beta lyase, alpha6/alpha6 incomplete toroid, sugar binding protein, lyase; HET: NAG GCU GCD; 2.10A {Pedobacter heparinum} PDB: 3e80_A* 2fut_A* 2fuq_A* (A:229-320)
Probab=10.63  E-value=1.2e+02  Score=14.26  Aligned_cols=14  Identities=29%  Similarity=0.959  Sum_probs=11.7

Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             77888886962010
Q 537021.9.peg.1   26 DIIFSIWYIQEVGA   39 (44)
Q Consensus        26 diifsiwyiqevga   39 (44)
                      .-.|+.|-.|..||
T Consensus        13 nDLF~LWIL~rMGA   26 (92)
T 3e7j_A           13 NDLFALWILDRMGA   26 (92)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHCCC
T ss_conf             99999999986618


No 3  
>>3dwl_E Actin-related protein 2/3 complex subunit 3; propellor, actin-binding, ATP-binding, cytoplasm, cytoskeleton, nucleotide-binding; HET: ATP; 3.78A {Schizosaccharomyces pombe} (E:)
Probab=6.65  E-value=2.3e+02  Score=12.88  Aligned_cols=37  Identities=22%  Similarity=0.366  Sum_probs=22.7

Q ss_pred             CCCHHHHHHHHHHH--HHHHHEEEHHHHHHHHHHHHHHH
Q ss_conf             21011479999953--37664231577788888696201
Q 537021.9.peg.1    2 IVREFSPFLKLLSF--GFVLLSINCRDIIFSIWYIQEVG   38 (44)
Q Consensus         2 ivrefspflkllsf--gfvllsincrdiifsiwyiqevg   38 (44)
                      ||-|---|.|.-+|  .|-.-+-.-|-+|+-+|||.|.=
T Consensus        43 IIDEaL~~FraN~FFrnfeik~~aDR~LIYltlyi~eCL   81 (174)
T 3dwl_E           43 IIDECIGLFRANCFFRNFEIKGPADRTLIYGTLFISECL   81 (174)
T ss_dssp             -CHHHHHHHHHHTTCCCC-----CTHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHH
T ss_conf             799999998764665236458862045523699999999


No 4  
>>1v54_A Cytochrome C oxidase polypeptide I; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} (A:1-89)
Probab=5.32  E-value=2.7e+02  Score=12.53  Aligned_cols=15  Identities=47%  Similarity=0.953  Sum_probs=10.3

Q ss_pred             HHEEEHHHH-----HHHHHH
Q ss_conf             642315777-----888886
Q 537021.9.peg.1   19 LLSINCRDI-----IFSIWY   33 (44)
Q Consensus        19 llsincrdi-----ifsiwy   33 (44)
                      +.|-|-+||     ||.+|-
T Consensus         7 l~STNHKdIGtLY~ifg~ws   26 (89)
T 1v54_A            7 LFSTNHKDIGTLYLLFGAWA   26 (89)
T ss_dssp             TSCCCHHHHHHHHHHHHHHH
T ss_pred             HCCCCHHHHHHHHHHHHHHH
T ss_conf             10277899999999999999


No 5  
>>1k8k_E P21, ARP2/3 complex 21 kDa subunit, P21-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} (E:)
Probab=5.11  E-value=2.9e+02  Score=12.39  Aligned_cols=37  Identities=27%  Similarity=0.355  Sum_probs=20.6

Q ss_pred             CCCHHHHHHHHHHH--HHHHHEEEHHHHHHHHHHHHHHH
Q ss_conf             21011479999953--37664231577788888696201
Q 537021.9.peg.1    2 IVREFSPFLKLLSF--GFVLLSINCRDIIFSIWYIQEVG   38 (44)
Q Consensus         2 ivrefspflkllsf--gfvllsincrdiifsiwyiqevg   38 (44)
                      ||.|---|.|.-+|  .|-.-|-.-|-+|+-+|||.|.=
T Consensus        41 IIDEaL~~FraN~FFrnfeIK~~aDR~LIYltlyi~eCL   79 (178)
T 1k8k_E           41 IVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECL   79 (178)
T ss_dssp             HHHHHHHHHHHHTTCSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHH
T ss_conf             799999998764665136457863145523699999999


No 6  
>>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A* (A:776-855)
Probab=4.55  E-value=2.6e+02  Score=12.65  Aligned_cols=19  Identities=42%  Similarity=0.634  Sum_probs=11.3

Q ss_pred             HHHHHHHHH--EEEHHHHHHH
Q ss_conf             995337664--2315777888
Q 537021.9.peg.1   12 LLSFGFVLL--SINCRDIIFS   30 (44)
Q Consensus        12 llsfgfvll--sincrdiifs   30 (44)
                      |..-|..-|  .|.|||-|..
T Consensus         9 lI~~g~~tl~evI~cRDDIM~   29 (80)
T 3f2b_A            9 LIQNGTCTLSEVIGCRDDIMV   29 (80)
T ss_dssp             HHHTTSSCGGGSCCSHHHHHH
T ss_pred             CCCCCCCCHHHHHCCHHHHHH
T ss_conf             023687668987300748999


No 7  
>>3kj0_B BCL-2-like protein 11; BH3, apoptosis, protein-peptide complex, alternative splicing, cytoplasm, developmental protein, differentiation; 1.70A {Homo sapiens} PDB: 2pqk_B (B:)
Probab=4.49  E-value=2.8e+02  Score=12.43  Aligned_cols=10  Identities=50%  Similarity=0.956  Sum_probs=7.0

Q ss_pred             HHHHHHHHHH
Q ss_conf             8888696201
Q 537021.9.peg.1   29 FSIWYIQEVG   38 (44)
Q Consensus        29 fsiwyiqevg   38 (44)
                      -.||+-||.-
T Consensus         6 peiwiaqelr   15 (27)
T 3kj0_B            6 PEIWYAQELR   15 (27)
T ss_dssp             HHHHHHHHHH
T ss_pred             CCCHHHHHHH
T ss_conf             4027999999


No 8  
>>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling, bifunctional enzyme; HET: NAD; 1.70A {Pseudomonas SP} (A:274-345)
Probab=4.23  E-value=3.4e+02  Score=12.06  Aligned_cols=34  Identities=21%  Similarity=0.306  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHH
Q ss_conf             1147999995337664231577788888696201
Q 537021.9.peg.1    5 EFSPFLKLLSFGFVLLSINCRDIIFSIWYIQEVG   38 (44)
Q Consensus         5 efspflkllsfgfvllsincrdiifsiwyiqevg   38 (44)
                      -||.||+--.-----..++-|||.+..=--+-||
T Consensus        17 VySsFl~ha~raa~~yGVd~rdIl~elGrR~~Vg   50 (72)
T 1nvm_A           17 VYSSFLRHAEIAAAKYNLKTLDILVELGHRRMVG   50 (72)
T ss_dssp             CCTTHHHHHHHHHHHHTCCHHHHHHHHHHHTCCT
T ss_pred             CCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
T ss_conf             4730554899999874998799998608821117


No 9  
>>1pyo_B Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase; 1.65A {Homo sapiens} (B:)
Probab=3.65  E-value=3.4e+02  Score=12.03  Aligned_cols=6  Identities=50%  Similarity=1.636  Sum_probs=0.0

Q ss_pred             HHHHHH
Q ss_conf             869620
Q 537021.9.peg.1   32 WYIQEV   37 (44)
Q Consensus        32 wyiqev   37 (44)
                      ||||+.
T Consensus        38 wfIq~L   43 (105)
T 1pyo_B           38 WYIEAL   43 (105)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
T ss_conf             899999


No 10 
>>1nj1_A Proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase; HET: 5CA; 2.55A {Methanothermobacterthermautotrophicus} (A:1-87)
Probab=3.61  E-value=3.9e+02  Score=11.77  Aligned_cols=9  Identities=33%  Similarity=0.866  Sum_probs=0.0

Q ss_pred             HHHHHHHHH
Q ss_conf             888869620
Q 537021.9.peg.1   29 FSIWYIQEV   37 (44)
Q Consensus        29 fsiwyiqev   37 (44)
                      ||-||.|-+
T Consensus        40 Fs~WY~eVi   48 (87)
T 1nj1_A           40 FSEWFHNIL   48 (87)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
T ss_conf             379999999


Done!