Query 537021.9.peg.21_1
Match_columns 44
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Sun May 22 11:57:12 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_21.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1p94a_ a.43.1.3 (A:) Plasmid 12.9 43 0.0032 13.9 1.7 16 6-21 60-75 (76)
2 d2d32a1 d.128.1.4 (A:1-518) Ga 10.9 35 0.0026 14.3 0.7 14 19-32 343-356 (518)
3 d1tm9a_ a.225.1.1 (A:) Hypothe 8.5 52 0.0038 13.5 0.9 12 22-33 95-106 (137)
4 d1fqia_ a.91.1.1 (A:) RGS9, RG 2.9 1.7E+02 0.012 11.0 2.3 19 1-19 102-120 (138)
5 d1h3ob_ a.22.1.3 (B:) TAF(II)- 2.0 2.3E+02 0.017 10.3 1.5 10 7-16 60-69 (74)
6 d2jm5a1 a.91.1.1 (A:3-134) Reg 1.9 2.4E+02 0.017 10.3 2.4 19 1-19 98-116 (132)
7 d2iu5a2 a.121.1.1 (A:72-180) T 1.9 2.4E+02 0.017 10.2 2.1 18 15-32 12-29 (109)
8 d1cmza_ a.91.1.1 (A:) Galpha i 1.9 2.4E+02 0.018 10.2 2.3 18 1-18 98-115 (128)
9 d1zyma1 a.60.10.1 (A:22-144) E 1.9 2.4E+02 0.018 10.2 0.7 11 11-21 95-105 (123)
10 d1e0ea_ a.4.10.1 (A:) N-termin 1.8 2.5E+02 0.018 10.1 1.4 9 4-12 31-39 (46)
No 1
>d1p94a_ a.43.1.3 (A:) Plasmid partition protein ParG {Salmonella enterica [TaxId: 28901]}
Probab=12.87 E-value=43 Score=13.86 Aligned_cols=16 Identities=44% Similarity=0.814 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999976444345565
Q 537021.9.peg.2 6 AKDILNHMEDNYLKES 21 (44)
Q Consensus 6 akdilnhmednylkes 21 (44)
-+|.+|..-||+|+|.
T Consensus 60 itdVi~~Lvd~WL~EN 75 (76)
T d1p94a_ 60 ITDVVNQLVDNWLKEN 75 (76)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 9999999999988626
No 2
>d2d32a1 d.128.1.4 (A:1-518) Gamma-glutamylcysteine synthetase GshA {Escherichia coli [TaxId: 562]}
Probab=10.87 E-value=35 Score=14.31 Aligned_cols=14 Identities=29% Similarity=0.890 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 56589999998889
Q 537021.9.peg.2 19 KESYIYFFDIFLIY 32 (44)
Q Consensus 19 kesyiyffdifliy 32 (44)
.++-|+|.|+||+|
T Consensus 343 s~~~i~FLdlfLly 356 (518)
T d2d32a1 343 DEQQVRFLDLFMVW 356 (518)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
T ss_conf 88898999999999
No 3
>d1tm9a_ a.225.1.1 (A:) Hypothetical protein MG354 {Mycoplasma genitalium [TaxId: 2097]}
Probab=8.46 E-value=52 Score=13.46 Aligned_cols=12 Identities=42% Similarity=0.891 Sum_probs=4.8
Q ss_pred HHHHHHHHHHHH
Q ss_conf 899999988895
Q 537021.9.peg.2 22 YIYFFDIFLIYH 33 (44)
Q Consensus 22 yiyffdifliyh 33 (44)
-|-|--++..||
T Consensus 95 aiifci~yflyh 106 (137)
T d1tm9a_ 95 AIIFCVIYFLYH 106 (137)
T ss_dssp HHHHHHHHHHHH
T ss_pred EEHHHHHHHHHH
T ss_conf 103559999998
No 4
>d1fqia_ a.91.1.1 (A:) RGS9, RGS domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=2.95 E-value=1.7e+02 Score=10.99 Aligned_cols=19 Identities=11% Similarity=0.120 Sum_probs=13.3
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q ss_conf 9446899999764443455
Q 537021.9.peg.2 1 MFYDVAKDILNHMEDNYLK 19 (44)
Q Consensus 1 mfydvakdilnhmednylk 19 (44)
+|..+-+.|+..|+.+++.
T Consensus 102 ~F~~aq~~V~~~l~~~~~~ 120 (138)
T d1fqia_ 102 VLDAAQTHIYMLMKKDSYA 120 (138)
T ss_dssp TTHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999998775777
No 5
>d1h3ob_ a.22.1.3 (B:) TAF(II)-20, (TAF(II)-15, hTAF12), histone fold domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.03 E-value=2.3e+02 Score=10.35 Aligned_cols=10 Identities=40% Similarity=0.640 Sum_probs=3.4
Q ss_pred HHHHHHHHHH
Q ss_conf 9999764443
Q 537021.9.peg.2 7 KDILNHMEDN 16 (44)
Q Consensus 7 kdilnhmedn 16 (44)
||+.-|.|-|
T Consensus 60 kDvql~LeR~ 69 (74)
T d1h3ob_ 60 KDVQLHLERQ 69 (74)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999833
No 6
>d2jm5a1 a.91.1.1 (A:3-134) Regulator of G-protein signaling 18, RGS18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.93 E-value=2.4e+02 Score=10.27 Aligned_cols=19 Identities=16% Similarity=0.235 Sum_probs=12.0
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q ss_conf 9446899999764443455
Q 537021.9.peg.2 1 MFYDVAKDILNHMEDNYLK 19 (44)
Q Consensus 1 mfydvakdilnhmednylk 19 (44)
+|..+-+.|...|+++++.
T Consensus 98 ~F~~aq~~V~~~l~~~~yp 116 (132)
T d2jm5a1 98 SFDAAQSRVYQLMEQDSYT 116 (132)
T ss_dssp TTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999998766625
No 7
>d2iu5a2 a.121.1.1 (A:72-180) Transcriptional activator DhaS {Lactococcus lactis [TaxId: 1358]}
Probab=1.91 E-value=2.4e+02 Score=10.25 Aligned_cols=18 Identities=39% Similarity=0.694 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 434556589999998889
Q 537021.9.peg.2 15 DNYLKESYIYFFDIFLIY 32 (44)
Q Consensus 15 dnylkesyiyffdifliy 32 (44)
-.||.|.-|++-.||.|-
T Consensus 12 lryldenqifyqkifvid 29 (109)
T d2iu5a2 12 LRYLDENQIFYQKIFVID 29 (109)
T ss_dssp HHHHHHTHHHHHHHHHHC
T ss_pred HHHCCCCCEEHEEEEEEC
T ss_conf 998141202030456870
No 8
>d1cmza_ a.91.1.1 (A:) Galpha interacting protein, GaIP {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.89 E-value=2.4e+02 Score=10.23 Aligned_cols=18 Identities=22% Similarity=0.266 Sum_probs=10.1
Q ss_pred CHHHHHHHHHHHHHHHHH
Q ss_conf 944689999976444345
Q 537021.9.peg.2 1 MFYDVAKDILNHMEDNYL 18 (44)
Q Consensus 1 mfydvakdilnhmednyl 18 (44)
+|..+-+.|...|+.+++
T Consensus 98 ~F~~aq~~V~~~l~~~~~ 115 (128)
T d1cmza_ 98 TFDDAQLQIYTLMHRDSY 115 (128)
T ss_dssp STHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHCCC
T ss_conf 999999999999875731
No 9
>d1zyma1 a.60.10.1 (A:22-144) Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain {Escherichia coli [TaxId: 562]}
Probab=1.87 E-value=2.4e+02 Score=10.21 Aligned_cols=11 Identities=45% Similarity=0.933 Sum_probs=4.7
Q ss_pred HHHHHHHHHHH
Q ss_conf 76444345565
Q 537021.9.peg.2 11 NHMEDNYLKES 21 (44)
Q Consensus 11 nhmednylkes 21 (44)
..|+|.|++|-
T Consensus 95 ~~~~d~YlreR 105 (123)
T d1zyma1 95 EELDDEYLKER 105 (123)
T ss_dssp SSSCCHHHHHH
T ss_pred HHCCCHHHHHH
T ss_conf 87778899988
No 10
>d1e0ea_ a.4.10.1 (A:) N-terminal Zn binding domain of HIV integrase {Human immunodeficiency virus type 2 [TaxId: 11709]}
Probab=1.79 E-value=2.5e+02 Score=10.14 Aligned_cols=9 Identities=44% Similarity=0.549 Sum_probs=0.0
Q ss_pred HHHHHHHHH
Q ss_conf 689999976
Q 537021.9.peg.2 4 DVAKDILNH 12 (44)
Q Consensus 4 dvakdilnh 12 (44)
.|||.|.+.
T Consensus 31 ~vAr~IV~~ 39 (46)
T d1e0ea_ 31 LVARQIVNS 39 (46)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999997
Done!