RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= 537021.9.peg.21_1 (44 letters) >2pff_B Fatty acid synthase subunit beta; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 2006 Score = 24.5 bits (53), Expect = 6.1 Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Query: 6 AKDILNHMEDNYLKESYIY-FFDIFL 30 A+D+ N DN+ K++Y + DI + Sbjct: 1642 AQDVWNR-ADNHFKDTYGFSILDIVI 1666 Score = 24.1 bits (52), Expect = 8.4 Identities = 7/22 (31%), Positives = 10/22 (45%) Query: 2 FYDVAKDILNHMEDNYLKESYI 23 F V L E+ YL+ + I Sbjct: 80 FDQVLNLCLTEFENCYLEGNDI 101 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.336 0.155 0.487 Gapped Lambda K H 0.267 0.0561 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 436,113 Number of extensions: 13297 Number of successful extensions: 106 Number of sequences better than 10.0: 1 Number of HSP's gapped: 106 Number of HSP's successfully gapped: 11 Length of query: 44 Length of database: 5,693,230 Length adjustment: 17 Effective length of query: 27 Effective length of database: 5,281,082 Effective search space: 142589214 Effective search space used: 142589214 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.6 bits) S2: 50 (23.4 bits)