Query 537021.9.peg.218_1
Match_columns 39
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed May 25 16:09:03 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_218.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1p9sa_ b.47.1.4 (A:) Coronavi 4.4 68 0.0049 13.4 -0.4 15 6-20 134-148 (300)
2 d1lvoa_ b.47.1.4 (A:) Coronavi 4.3 69 0.005 13.3 -0.4 15 6-20 134-148 (299)
3 d2duca1 b.47.1.4 (A:2-301) Cor 4.3 70 0.0051 13.3 -0.4 15 6-20 134-148 (300)
4 d1dfca2 b.42.5.1 (A:1141-1259) 2.5 1.7E+02 0.013 11.3 0.2 11 25-35 6-16 (119)
5 d1q9ha_ b.29.1.10 (A:) Cellobi 1.8 2.6E+02 0.019 10.4 2.1 13 21-33 297-309 (435)
6 d1yl7a1 c.2.1.3 (A:2-105,A:215 1.8 1.3E+02 0.0092 12.0 -1.5 10 13-22 8-17 (135)
7 d1eg1a_ b.29.1.10 (A:) Cellobi 1.7 2.8E+02 0.02 10.3 2.1 17 17-33 259-275 (371)
8 d1mkya2 c.37.1.8 (A:173-358) P 1.6 2.3E+02 0.016 10.8 -0.5 23 7-29 5-27 (186)
9 d2v3ia1 b.29.1.10 (A:1-434) Ce 1.5 3E+02 0.022 10.1 1.4 7 27-33 300-306 (434)
10 d2fyui1 d.184.1.3 (I:1-57) Ubi 1.5 3.1E+02 0.022 10.1 0.6 8 16-23 1-8 (57)
No 1
>d1p9sa_ b.47.1.4 (A:) Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) {Human coronavirus 229E [TaxId: 11137]}
Probab=4.41 E-value=68 Score=13.37 Aligned_cols=15 Identities=47% Similarity=0.718 Sum_probs=11.9
Q ss_pred EEECCEEEECCCCCC
Q ss_conf 973103531135421
Q 537021.9.peg.2 6 TIEDSFLYGKMGSTA 20 (39)
Q Consensus 6 tiedsflygkmgsta 20 (39)
||..|||-|.-||..
T Consensus 134 TIkgSFl~GaCGSvG 148 (300)
T d1p9sa_ 134 TIRGSFINGACGSPG 148 (300)
T ss_dssp CBCCCCCTTCTTCEE
T ss_pred EEEEEEECCCCCCCC
T ss_conf 078888746578883
No 2
>d1lvoa_ b.47.1.4 (A:) Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) {Transmissible gastroenteritis virus [TaxId: 11149]}
Probab=4.33 E-value=69 Score=13.32 Aligned_cols=15 Identities=47% Similarity=0.727 Sum_probs=11.9
Q ss_pred EEECCEEEECCCCCC
Q ss_conf 973103531135421
Q 537021.9.peg.2 6 TIEDSFLYGKMGSTA 20 (39)
Q Consensus 6 tiedsflygkmgsta 20 (39)
||..|||-|.-||..
T Consensus 134 TIrgSFl~GaCGSvG 148 (299)
T d1lvoa_ 134 TIKGSFIAGTCGSVG 148 (299)
T ss_dssp CBCCCCCTTCTTCEE
T ss_pred CEEEEEECCCCCCCC
T ss_conf 088888746578983
No 3
>d2duca1 b.47.1.4 (A:2-301) Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) {SARS coronavirus [TaxId: 227859]}
Probab=4.28 E-value=70 Score=13.29 Aligned_cols=15 Identities=53% Similarity=0.771 Sum_probs=12.0
Q ss_pred EEECCEEEECCCCCC
Q ss_conf 973103531135421
Q 537021.9.peg.2 6 TIEDSFLYGKMGSTA 20 (39)
Q Consensus 6 tiedsflygkmgsta 20 (39)
||..|||-|.-||..
T Consensus 134 TIkgSFl~GaCGSvG 148 (300)
T d2duca1 134 TIKGSFLNGSCGSVG 148 (300)
T ss_dssp CBCCCCCTTCTTCEE
T ss_pred CEEEEEECCCCCCCC
T ss_conf 078888746578883
No 4
>d1dfca2 b.42.5.1 (A:1141-1259) Fascin {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.54 E-value=1.7e+02 Score=11.33 Aligned_cols=11 Identities=45% Similarity=0.812 Sum_probs=4.1
Q ss_pred EEEEEEEEEEE
Q ss_conf 01223689999
Q 537021.9.peg.2 25 SVINRRYVQIS 35 (39)
Q Consensus 25 svinrryvqis 35 (39)
||..+||+..|
T Consensus 6 Sv~rkrYahls 16 (119)
T d1dfca2 6 SVTRKRYAHLS 16 (119)
T ss_dssp ETTTCCEEEEC
T ss_pred CCCCEEEEEEC
T ss_conf 15620679957
No 5
>d1q9ha_ b.29.1.10 (A:) Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) {Talaromyces emersonii [TaxId: 68825]}
Probab=1.82 E-value=2.6e+02 Score=10.43 Aligned_cols=13 Identities=38% Similarity=0.514 Sum_probs=9.1
Q ss_pred CCCCEEEEEEEEE
Q ss_conf 1210012236899
Q 537021.9.peg.2 21 ARSTSVINRRYVQ 33 (39)
Q Consensus 21 arstsvinrryvq 33 (39)
.-.-+-|.|.|||
T Consensus 297 ~G~LteIrR~YVQ 309 (435)
T d1q9ha_ 297 TGTLSEIKRFYIQ 309 (435)
T ss_dssp TSCEEEEEEEEEE
T ss_pred CCCEEEEEEEEEE
T ss_conf 5213058899988
No 6
>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=1.78 E-value=1.3e+02 Score=12.03 Aligned_cols=10 Identities=50% Similarity=0.787 Sum_probs=0.0
Q ss_pred EECCCCCCCC
Q ss_conf 3113542112
Q 537021.9.peg.2 13 YGKMGSTAAR 22 (39)
Q Consensus 13 ygkmgstaar 22 (39)
+||||+..++
T Consensus 8 ~GrMG~~i~~ 17 (135)
T d1yl7a1 8 KGKVGATMVR 17 (135)
T ss_dssp TSHHHHHHHH
T ss_pred CCHHHHHHHH
T ss_conf 9877999999
No 7
>d1eg1a_ b.29.1.10 (A:) Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) {Trichoderma reesei, Endoglucanase I [TaxId: 51453]}
Probab=1.68 E-value=2.8e+02 Score=10.30 Aligned_cols=17 Identities=24% Similarity=0.417 Sum_probs=0.0
Q ss_pred CCCCCCCCEEEEEEEEE
Q ss_conf 54211210012236899
Q 537021.9.peg.2 17 GSTAARSTSVINRRYVQ 33 (39)
Q Consensus 17 gstaarstsvinrryvq 33 (39)
+.+..-.-+-|.|.|||
T Consensus 259 ~~t~~G~LtEIrR~YVQ 275 (371)
T d1eg1a_ 259 NGSPSGNLVSITRKYQQ 275 (371)
T ss_dssp TSSTTSCEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEEE
T ss_conf 98664434477579997
No 8
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=1.57 E-value=2.3e+02 Score=10.77 Aligned_cols=23 Identities=17% Similarity=0.319 Sum_probs=0.0
Q ss_pred EECCEEEECCCCCCCCCCEEEEE
Q ss_conf 73103531135421121001223
Q 537021.9.peg.2 7 IEDSFLYGKMGSTAARSTSVINR 29 (39)
Q Consensus 7 iedsflygkmgstaarstsvinr 29 (39)
|.|+|--+-+|.+.+--+|.+|+
T Consensus 5 ~~~~~kV~iiG~~~~GKSTLin~ 27 (186)
T d1mkya2 5 ITDAIKVAIVGRPNVGKSTLFNA 27 (186)
T ss_dssp CCSCEEEEEECSTTSSHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHH
T ss_conf 78888899999999999999999
No 9
>d2v3ia1 b.29.1.10 (A:1-434) Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) {Trichoderma reesei, Cel7A [TaxId: 51453]}
Probab=1.53 E-value=3e+02 Score=10.13 Aligned_cols=7 Identities=86% Similarity=1.170 Sum_probs=0.0
Q ss_pred EEEEEEE
Q ss_conf 2236899
Q 537021.9.peg.2 27 INRRYVQ 33 (39)
Q Consensus 27 inrryvq 33 (39)
|.|.|||
T Consensus 300 IrR~YVQ 306 (434)
T d2v3ia1 300 INRYYVQ 306 (434)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
T ss_conf 8899986
No 10
>d2fyui1 d.184.1.3 (I:1-57) Ubiquinol-cytochrome c reductase 8 kDa protein {Cow (Bos taurus) [TaxId: 9913]}
Probab=1.49 E-value=3.1e+02 Score=10.08 Aligned_cols=8 Identities=75% Similarity=0.576 Sum_probs=0.0
Q ss_pred CCCCCCCC
Q ss_conf 35421121
Q 537021.9.peg.2 16 MGSTAARS 23 (39)
Q Consensus 16 mgstaars 23 (39)
|-|-||||
T Consensus 1 MlSvAARs 8 (57)
T d2fyui1 1 MLSVAARS 8 (57)
T ss_dssp CCCSGGGS
T ss_pred CCCHHHCC
T ss_conf 94411014
Done!