RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= 537021.9.peg.224_1
         (38 letters)



>2ke0_A Peptidyl-prolyl CIS-trans isomerase; bupsa.00130.A, FK506
          binding protein FKBP, structural genomics; NMR
          {Burkholderia pseudomallei} (A:)
          Length = 117

 Score = 23.8 bits (51), Expect = 8.4
 Identities = 5/21 (23%), Positives = 9/21 (42%)

Query: 5  NKEKIGIKTLEKAIKYETIRA 25
              + + T E  +KYE +  
Sbjct: 1  GPGSMTVVTTESGLKYEDLTE 21


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.319    0.134    0.378 

Gapped
Lambda     K      H
   0.267   0.0604    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 257,798
Number of extensions: 5409
Number of successful extensions: 40
Number of sequences better than 10.0: 1
Number of HSP's gapped: 40
Number of HSP's successfully gapped: 2
Length of query: 38
Length of database: 4,956,049
Length adjustment: 11
Effective length of query: 27
Effective length of database: 4,584,194
Effective search space: 123773238
Effective search space used: 123773238
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.3 bits)