Query         537021.9.peg.227_1
Match_columns 37
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 33803
Date          Wed May 25 15:58:23 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_227.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >1ksi_A Copper amine oxidase;   50.8      20 0.00059   18.3   3.7   23    3-25     31-53  (436)
  2 >2oqe_A Peroxisomal copper ami  40.9      25 0.00073   17.8   2.9   24    3-26     21-44  (430)
  3 >3hi7_A Amiloride-sensitive am  38.3      28 0.00084   17.5   2.9   22    3-24     39-60  (469)
  4 >1tu5_A Copper amine oxidase,   38.3      29 0.00085   17.5   2.9   23    3-25     31-53  (460)
  5 >1spu_A Copper amine oxidase;   33.6      38  0.0011   16.8   2.9   24    3-26     46-69  (446)
  6 >1w6g_A Phenylethylamine oxida  33.3      42  0.0013   16.6   3.1   24    3-26     31-54  (437)
  7 >1orv_A Dipeptidyl peptidase I  21.6      59  0.0017   15.9   2.1   21    7-27      6-28  (41)
  8 >2pqr_C WD repeat protein YKR0  17.9      30  0.0009   17.3   0.0   14   12-25      7-20  (64)
  9 >2k0r_A Thiol:disulfide interc  16.0      96  0.0028   14.7   2.2   21    5-25     25-45  (128)
 10 >1w7c_A Lysyl oxidase; AMNE ox  14.5      40  0.0012   16.7  -0.1   20    4-23     38-57  (470)

No 1  
>>1ksi_A Copper amine oxidase; PEA seedling, oxidoreductase; HET: TPQ NAG; 2.20A {Pisum sativum} (A:207-642)
Probab=50.83  E-value=20  Score=18.29  Aligned_cols=23  Identities=26%  Similarity=0.683  Sum_probs=20.8

Q ss_pred             EEEEEEEECCCCEEEEEECCCCC
Q ss_conf             47899997354139998336301
Q 537021.9.peg.2    3 TWGLYVSFSSRKGIFLYQNNFYT   25 (37)
Q Consensus         3 twglyvsfssrkgiflyqnnfyt   25 (37)
                      .|.++++|++|.|+-|++-.|..
T Consensus        31 ~W~f~~~~~~reGlvL~dv~y~d   53 (436)
T 1ksi_A           31 NWKFHIGFDVRAGIVISLASIYD   53 (436)
T ss_dssp             TEEEEEEEETTTEEEEEEEEEEE
T ss_pred             CCEEEEEECCCCCCEEEEEEEEC
T ss_conf             87799973687662578789872


No 2  
>>2oqe_A Peroxisomal copper amine oxidase; protein-derived cofactor, TPQ, XE, xenon complex, oxidoreductase; HET: TPQ; 1.60A {Pichia angusta} (A:231-660)
Probab=40.92  E-value=25  Score=17.81  Aligned_cols=24  Identities=21%  Similarity=0.494  Sum_probs=21.0

Q ss_pred             EEEEEEEECCCCEEEEEECCCCCC
Q ss_conf             478999973541399983363012
Q 537021.9.peg.2    3 TWGLYVSFSSRKGIFLYQNNFYTQ   26 (37)
Q Consensus         3 twglyvsfssrkgiflyqnnfytq   26 (37)
                      .|.++++|..|.|+-|++-.|.-+
T Consensus        21 ~W~f~~g~~~r~Gl~L~dv~y~~~   44 (430)
T 2oqe_A           21 NFKFHIGFNYREGIVLSDVSYNDH   44 (430)
T ss_dssp             TEEEEEEEETTTEEEEEEEEEEET
T ss_pred             CCEEEEECCCCCCEEEEEEEECCC
T ss_conf             967999607875408987798589


No 3  
>>3hi7_A Amiloride-sensitive amine oxidase; oxidoreductase, copper amine oxidase, topaquinone, TPQ, diamine oxidase, DAO, human, alternative splicing; HET: TPQ NAG BMA; 1.80A {Homo sapiens} PDB: 3hig_A* 3hii_A* (A:263-731)
Probab=38.33  E-value=28  Score=17.48  Aligned_cols=22  Identities=18%  Similarity=0.431  Sum_probs=19.5

Q ss_pred             EEEEEEEECCCCEEEEEECCCC
Q ss_conf             4789999735413999833630
Q 537021.9.peg.2    3 TWGLYVSFSSRKGIFLYQNNFY   24 (37)
Q Consensus         3 twglyvsfssrkgiflyqnnfy   24 (37)
                      .|.++++|..|.|+-|++-.|.
T Consensus        39 ~W~f~vgf~~reGlvL~dv~y~   60 (469)
T 3hi7_A           39 GWSFAFRLRSSSGLQVLNVHFG   60 (469)
T ss_dssp             TEEEEEEEETTTEEEEEEEEET
T ss_pred             CCEEEEECCCCCCEEEEEEEEC
T ss_conf             8779983488863499888888


No 4  
>>1tu5_A Copper amine oxidase, liver isozyme; oxidoreductase, quinoenzyme, TPQ; HET: TPQ NAG NDG; 2.37A {Bos taurus} PDB: 2pnc_A* 1us1_A* 1pu4_A* 2c10_A* 2c11_A* (A:287-746)
Probab=38.26  E-value=29  Score=17.47  Aligned_cols=23  Identities=13%  Similarity=0.345  Sum_probs=19.9

Q ss_pred             EEEEEEEECCCCEEEEEECCCCC
Q ss_conf             47899997354139998336301
Q 537021.9.peg.2    3 TWGLYVSFSSRKGIFLYQNNFYT   25 (37)
Q Consensus         3 twglyvsfssrkgiflyqnnfyt   25 (37)
                      .|.++++|..|.|+-|++-.|.-
T Consensus        31 ~W~f~~~f~~r~Gl~L~dv~y~~   53 (460)
T 1tu5_A           31 LWTFSFGLGAFSGPRVFDVRFQG   53 (460)
T ss_dssp             SEEEEEEEETTTEEEEEEEEETT
T ss_pred             CCEEEEEECCCCCCEEEEEEECC
T ss_conf             88799960787786898778899


No 5  
>>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} (A:79-95,A:299-727)
Probab=33.57  E-value=38  Score=16.84  Aligned_cols=24  Identities=21%  Similarity=0.494  Sum_probs=21.6

Q ss_pred             EEEEEEEECCCCEEEEEECCCCCC
Q ss_conf             478999973541399983363012
Q 537021.9.peg.2    3 TWGLYVSFSSRKGIFLYQNNFYTQ   26 (37)
Q Consensus         3 twglyvsfssrkgiflyqnnfytq   26 (37)
                      .|.++++|..|.|+-|++-.|.-+
T Consensus        46 ~W~f~~~f~~r~Glvl~dv~y~g~   69 (446)
T 1spu_A           46 NWDFHLSMNSRVGPMISTVTYNDN   69 (446)
T ss_dssp             TEEEEEEEETTTEEEEEEEEEEET
T ss_pred             CCEEEEEECCCCCCEEEEEEEECC
T ss_conf             977999716876628987799379


No 6  
>>1w6g_A Phenylethylamine oxidase; 3D-structure, copper, copper containing, metal-binding, oxidoreductase, TPQ, quinone, holoenzyme; HET: TPQ GOL; 1.55A {Arthrobacter globiformis} (A:210-646)
Probab=33.32  E-value=42  Score=16.58  Aligned_cols=24  Identities=33%  Similarity=0.632  Sum_probs=21.4

Q ss_pred             EEEEEEEECCCCEEEEEECCCCCC
Q ss_conf             478999973541399983363012
Q 537021.9.peg.2    3 TWGLYVSFSSRKGIFLYQNNFYTQ   26 (37)
Q Consensus         3 twglyvsfssrkgiflyqnnfytq   26 (37)
                      -|.++++|..|.|+-|++-.|.-+
T Consensus        31 ~W~f~~~f~~r~Gl~l~dv~y~g~   54 (437)
T 1w6g_A           31 KWSLDVGFDVREGVVLHNIAFRDG   54 (437)
T ss_dssp             TEEEEEEEETTTEEEEEEEEEEET
T ss_pred             CCEEEEEECCCCCEEEEEEEECCC
T ss_conf             878999607875408987687489


No 7  
>>1orv_A Dipeptidyl peptidase IV; serine protease, mechanism, oxyanion HOLE, substrate channeling, drug design, diabetes mellitus, hydrolase; HET: NAG BMA; 1.80A {Sus scrofa} (A:111-151)
Probab=21.60  E-value=59  Score=15.85  Aligned_cols=21  Identities=19%  Similarity=0.673  Sum_probs=15.7

Q ss_pred             EEEEC--CCCEEEEEECCCCCCC
Q ss_conf             99973--5413999833630123
Q 537021.9.peg.2    7 YVSFS--SRKGIFLYQNNFYTQE   27 (37)
Q Consensus         7 yvsfs--srkgiflyqnnfytqe   27 (37)
                      |.+||  +++=.|.+.||.|-++
T Consensus         6 ~a~wSP~G~~vafV~~nNiYv~~   28 (41)
T 1orv_A            6 WITWSPVGHKLAYVWNNDIYVKN   28 (41)
T ss_dssp             EEEECSSTTCEEEEETTEEEEES
T ss_pred             EEEECCCCCEEEEEECCEEEEEE
T ss_conf             25999999989999898089998


No 8  
>>2pqr_C WD repeat protein YKR036C; TPR domain, protein-protein complex, apoptosis; 1.88A {Saccharomyces cerevisiae} (C:)
Probab=17.90  E-value=30  Score=17.33  Aligned_cols=14  Identities=43%  Similarity=0.809  Sum_probs=10.6

Q ss_pred             CCCEEEEEECCCCC
Q ss_conf             54139998336301
Q 537021.9.peg.2   12 SRKGIFLYQNNFYT   25 (37)
Q Consensus        12 srkgiflyqnnfyt   25 (37)
                      ..-|||-+|||+-.
T Consensus         7 gqvgifsfqnnyad   20 (64)
T 2pqr_C            7 GQVGIFSFQNNYAD   20 (64)
T ss_dssp             --------------
T ss_pred             CEEEEEEEECCCCC
T ss_conf             60679984045543


No 9  
>>2k0r_A Thiol:disulfide interchange protein DSBD; immunoglobulin, mutant, N-terminal domain, disulfide bond reductase; NMR {Neisseria meningitidis serogroup B} PDB: 2k9f_B (A:)
Probab=15.96  E-value=96  Score=14.74  Aligned_cols=21  Identities=29%  Similarity=0.615  Sum_probs=16.3

Q ss_pred             EEEEEECCCCEEEEEECCCCC
Q ss_conf             899997354139998336301
Q 537021.9.peg.2    5 GLYVSFSSRKGIFLYQNNFYT   25 (37)
Q Consensus         5 glyvsfssrkgiflyqnnfyt   25 (37)
                      .+.+.|.-..|.+||+|.|--
T Consensus        25 ~l~i~~~Ia~gyyLY~~~i~~   45 (128)
T 2k0r_A           25 GVNVRFRIADGYYMYQAKIVG   45 (128)
T ss_dssp             EEEEEEEECTTEEEETTTCEE
T ss_pred             EEEEEEEECCCCEEEEEEEEE
T ss_conf             789999978981332124564


No 10 
>>1w7c_A Lysyl oxidase; AMNE oxidase, copper, oxidoreductase, quinoprotein, topaquinone enzyme, TPQ; HET: BMA NAG TPQ IMD; 1.23A {Pichia pastoris} (A:268-737)
Probab=14.51  E-value=40  Score=16.72  Aligned_cols=20  Identities=45%  Similarity=1.022  Sum_probs=0.0

Q ss_pred             EEEEEEECCCCEEEEEECCC
Q ss_conf             78999973541399983363
Q 537021.9.peg.2    4 WGLYVSFSSRKGIFLYQNNF   23 (37)
Q Consensus         4 wglyvsfssrkgiflyqnnf   23 (37)
                      |.++++|++|.|+-|++-.|
T Consensus        38 W~f~~~~~~r~Gl~l~dv~y   57 (470)
T 1w7c_A           38 WGFYTSWSRDTGISFYDITF   57 (470)
T ss_dssp             TTEEEEEEEETTTEEEEEEE
T ss_pred             CCCEEEEECCCCCCEEEEEE
T ss_conf             58479985377766189855


Done!