Query 537021.9.peg.248_1 Match_columns 45 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 13730 Date Wed May 25 16:03:37 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_248.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1f3ka_ g.3.6.1 (A:) Conotoxin 7.2 43 0.0032 14.8 -0.0 19 26-44 8-26 (26) 2 d2p5ma1 d.74.2.1 (A:79-149) C- 5.4 1.1E+02 0.0079 12.8 1.2 22 20-41 26-47 (71) 3 d1zhxa1 d.338.1.1 (A:2-434) Ox 4.8 90 0.0065 13.2 0.4 30 7-37 3-34 (433) 4 d1b4ba_ d.74.2.1 (A:) C-termin 4.5 1.4E+02 0.0099 12.3 1.3 21 21-41 27-47 (71) 5 d2b3ya2 c.83.1.1 (A:2-630) Iro 4.1 1.5E+02 0.011 12.2 1.8 38 5-43 469-506 (629) 6 d2j5la1 g.61.1.1 (A:479-512) A 3.9 63 0.0046 14.0 -0.9 14 20-33 1-14 (34) 7 d1cpza_ d.58.17.1 (A:) Copper 3.9 91 0.0066 13.2 -0.1 7 36-42 8-14 (68) 8 d1qupa2 d.58.17.1 (A:2-73) Cop 3.8 88 0.0064 13.3 -0.2 8 35-42 12-19 (72) 9 d1kvja_ d.58.17.1 (A:) Menkes 3.6 90 0.0065 13.2 -0.4 7 36-42 16-22 (79) 10 d2aw0a_ d.58.17.1 (A:) Menkes 3.3 93 0.0068 13.2 -0.5 7 36-42 11-17 (72) No 1 >d1f3ka_ g.3.6.1 (A:) Conotoxin {Conus textile, Tx VII [TaxId: 6494]} Probab=7.20 E-value=43 Score=14.84 Aligned_cols=19 Identities=37% Similarity=0.899 Sum_probs=14.8 Q ss_pred HHHCCCCEEEEECCCEEEE Q ss_conf 5312663211202221341 Q 537021.9.peg.2 26 LDSLSFPCFIGISCGACIF 44 (45) Q Consensus 26 ldslsfpcfigiscgacif 44 (45) -|..|..|-.||--|.|.+ T Consensus 8 cdvfsldcctgiclgvcmw 26 (26) T d1f3ka_ 8 CDVFSLDCCTGICLGVCMW 26 (26) T ss_dssp CCSSSCCSTTSCCSSSCCC T ss_pred CCEEEEECCCCEEEEEEEC T ss_conf 4677770334237778729 No 2 >d2p5ma1 d.74.2.1 (A:79-149) C-terminal domain of arginine repressor {Bacillus subtilis [TaxId: 1423]} Probab=5.45 E-value=1.1e+02 Score=12.84 Aligned_cols=22 Identities=27% Similarity=0.699 Sum_probs=17.8 Q ss_pred HHHHHHHHHCCCCEEEEECCCE Q ss_conf 7676565312663211202221 Q 537021.9.peg.2 20 IFVGNFLDSLSFPCFIGISCGA 41 (45) Q Consensus 20 ifvgnfldslsfpcfigiscga 41 (45) -.++..+|.+.+|-..|.-+|. T Consensus 26 ~~va~~iD~~~~~~I~GTIAGd 47 (71) T d2p5ma1 26 QAIGALMDNLDWDEMMGTICGD 47 (71) T ss_dssp HHHHHHHHTTTCTTCCEEEECS T ss_pred HHHHHHHHCCCCCCEEEEECCC T ss_conf 9999998628999718997149 No 3 >d1zhxa1 d.338.1.1 (A:2-434) Oxysterol-binding protein homolog 4, KES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=4.78 E-value=90 Score=13.25 Aligned_cols=30 Identities=50% Similarity=0.474 Sum_probs=19.1 Q ss_pred CCCCHHHHHHHHHH--HHHHHHHHCCCCEEEEE Q ss_conf 01213556677887--67656531266321120 Q 537021.9.peg.2 7 QAGSLVATGFLEKI--FVGNFLDSLSFPCFIGI 37 (45) Q Consensus 7 qagslvatgfleki--fvgnfldslsfpcfigi 37 (45) ||.+-.-++||..| |-| =|-++|+|.||-- T Consensus 3 ~~~~s~w~~flk~i~s~~~-DLs~is~P~~i~e 34 (433) T d1zhxa1 3 YASSSSWTSFLKSIASFNG-DLSSLSAPPFILS 34 (433) T ss_dssp HTTSHHHHHHHHTTTTCCS-CGGGSCCCGGGEE T ss_pred CCCCCHHHHHHHHHHHCCC-CCCEEEECCEECC T ss_conf 5542079999998750388-4440222761216 No 4 >d1b4ba_ d.74.2.1 (A:) C-terminal domain of arginine repressor {Bacillus stearothermophilus [TaxId: 1422]} Probab=4.51 E-value=1.4e+02 Score=12.34 Aligned_cols=21 Identities=33% Similarity=0.751 Sum_probs=17.2 Q ss_pred HHHHHHHHCCCCEEEEECCCE Q ss_conf 676565312663211202221 Q 537021.9.peg.2 21 FVGNFLDSLSFPCFIGISCGA 41 (45) Q Consensus 21 fvgnfldslsfpcfigiscga 41 (45) -++..+|.+.+|-..|.-+|. T Consensus 27 ~va~~iD~~~~~~I~GTIAGd 47 (71) T d1b4ba_ 27 AIGVLLDNLDWDEIVGTICGD 47 (71) T ss_dssp HHHHHHHHHCCTTEEEEEECS T ss_pred HHHHHHHCCCCCCEEEEEECC T ss_conf 999998628999808997039 No 5 >d2b3ya2 c.83.1.1 (A:2-630) Iron-responsive element binding protein 1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Probab=4.10 E-value=1.5e+02 Score=12.17 Aligned_cols=38 Identities=37% Similarity=0.580 Sum_probs=27.6 Q ss_pred EECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEE Q ss_conf 110121355667788767656531266321120222134 Q 537021.9.peg.2 5 FLQAGSLVATGFLEKIFVGNFLDSLSFPCFIGISCGACI 43 (45) Q Consensus 5 flqagslvatgflekifvgnfldslsfpcfigiscgaci 43 (45) .+..||-+.+-.+|+-=.-..|+.+.|-- .+-.|+.|| T Consensus 469 ~v~PGS~~V~~~le~~Gl~~~L~~aGf~i-~~~GC~~Ci 506 (629) T d2b3ya2 469 SLSPGSGVVTYYLQESGVMPYLSQLGFDV-VGYGCMTCI 506 (629) T ss_dssp EECCSSHHHHHHHHHTSCHHHHHHTTCCB-CCSSCGGGG T ss_pred EEECCCHHHHHHHHHCCCHHHHHHCEEEE-ECCCCCCCC T ss_conf 88536033237877677155333100589-246430037 No 6 >d2j5la1 g.61.1.1 (A:479-512) Apical membrane antigen 1 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Probab=3.90 E-value=63 Score=14.02 Aligned_cols=14 Identities=50% Similarity=0.937 Sum_probs=0.0 Q ss_pred HHHHHHHHHCCCCE Q ss_conf 76765653126632 Q 537021.9.peg.2 20 IFVGNFLDSLSFPC 33 (45) Q Consensus 20 ifvgnfldslsfpc 33 (45) ||..|--|||.-|| T Consensus 1 IFIS~Dk~slkCPC 14 (34) T d2j5la1 1 IFISDDKDSLKCPC 14 (34) T ss_dssp CCEESSSGGGCCSS T ss_pred CEECCCCCCCCCCC T ss_conf 93427732243998 No 7 >d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Probab=3.89 E-value=91 Score=13.23 Aligned_cols=7 Identities=57% Similarity=1.611 Sum_probs=0.0 Q ss_pred EECCCEE Q ss_conf 2022213 Q 537021.9.peg.2 36 GISCGAC 42 (45) Q Consensus 36 giscgac 42 (45) |++|+.| T Consensus 8 GM~C~~C 14 (68) T d1cpza_ 8 GMSCNHC 14 (68) T ss_dssp CCCSSSH T ss_pred CEECHHH T ss_conf 8675899 No 8 >d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=3.84 E-value=88 Score=13.29 Aligned_cols=8 Identities=38% Similarity=1.107 Sum_probs=0.0 Q ss_pred EEECCCEE Q ss_conf 12022213 Q 537021.9.peg.2 35 IGISCGAC 42 (45) Q Consensus 35 igiscgac 42 (45) ++++|++| T Consensus 12 V~M~C~~C 19 (72) T d1qupa2 12 IPMHCENC 19 (72) T ss_dssp CCCCSTTH T ss_pred ECCCCHHH T ss_conf 95498899 No 9 >d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Probab=3.56 E-value=90 Score=13.25 Aligned_cols=7 Identities=43% Similarity=1.668 Sum_probs=0.0 Q ss_pred EECCCEE Q ss_conf 2022213 Q 537021.9.peg.2 36 GISCGAC 42 (45) Q Consensus 36 giscgac 42 (45) |+.|+.| T Consensus 16 gm~C~~C 22 (79) T d1kvja_ 16 GMTCNSC 22 (79) T ss_dssp SCCSTHH T ss_pred CEECHHH T ss_conf 9454899 No 10 >d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Probab=3.29 E-value=93 Score=13.18 Aligned_cols=7 Identities=43% Similarity=1.668 Sum_probs=0.0 Q ss_pred EECCCEE Q ss_conf 2022213 Q 537021.9.peg.2 36 GISCGAC 42 (45) Q Consensus 36 giscgac 42 (45) |++|+.| T Consensus 11 GM~C~~C 17 (72) T d2aw0a_ 11 GMTCNSC 17 (72) T ss_dssp CCCSHHH T ss_pred CCCCHHH T ss_conf 9016889 Done!