RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= 537021.9.peg.248_1
         (45 letters)



>gnl|CDD|177699 PLN00070, PLN00070, aconitate hydratase.
          Length = 936

 Score = 25.9 bits (57), Expect = 2.3
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 6   LQAGSLVATGFLEKIFVGNFLDSLSFPCFIGISCGACI 43
           L  GS V T +L K  +  +L+   F   +G  C  CI
Sbjct: 513 LAPGSGVVTKYLLKSGLQKYLNQQGFH-IVGYGCTTCI 549


>gnl|CDD|178575 PLN02996, PLN02996, fatty acyl-CoA reductase.
          Length = 491

 Score = 25.8 bits (57), Expect = 2.9
 Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 3/23 (13%)

Query: 3  INFLQAGSLV---ATGFLEKIFV 22
          + FL+  +++   ATGFL KIFV
Sbjct: 6  VQFLENKTILVTGATGFLAKIFV 28


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.337    0.152    0.487 

Gapped
Lambda     K      H
   0.267   0.0725    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 692,694
Number of extensions: 25440
Number of successful extensions: 115
Number of sequences better than 10.0: 1
Number of HSP's gapped: 115
Number of HSP's successfully gapped: 7
Length of query: 45
Length of database: 5,994,473
Length adjustment: 18
Effective length of query: 27
Effective length of database: 5,605,529
Effective search space: 151349283
Effective search space used: 151349283
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 50 (23.0 bits)