Query 537021.9.peg.252_1
Match_columns 45
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed May 25 16:10:04 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_252.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1dmua_ c.52.1.4 (A:) Restrict 2.7 1.7E+02 0.012 12.6 0.3 20 17-36 218-237 (299)
2 d1rm6b2 d.145.1.3 (B:1-216) 4- 2.3 2.3E+02 0.016 12.1 0.5 15 6-20 99-113 (216)
3 d2vxfa1 b.38.1.5 (A:6-85) LSM1 1.7 1.5E+02 0.011 12.8 -1.2 15 3-17 26-40 (80)
4 d1xn8a_ a.229.1.1 (A:) Hypothe 1.6 3.2E+02 0.024 11.4 0.3 12 3-15 9-20 (131)
5 d1ffvc2 d.145.1.3 (C:1-177) Ca 1.5 3.7E+02 0.027 11.1 0.8 21 6-29 99-119 (177)
6 d1vcva1 c.1.10.1 (A:1-226) Deo 1.5 3E+02 0.022 11.5 0.0 12 2-13 3-14 (226)
7 d1jroa4 d.145.1.3 (A:179-345) 1.5 3.9E+02 0.028 11.0 0.7 21 6-29 90-110 (167)
8 d1rutx3 g.39.1.3 (X:83-113) LI 1.4 4E+02 0.029 11.0 1.1 15 25-39 6-20 (31)
9 d1u3em1 d.4.1.3 (M:1-105) Intr 1.4 2.4E+02 0.017 12.0 -0.8 27 1-27 1-29 (105)
10 d1pvza_ g.3.7.2 (A:) K+ toxin- 1.4 3.3E+02 0.024 11.3 -0.0 11 19-29 5-15 (31)
No 1
>d1dmua_ c.52.1.4 (A:) Restriction endonuclease BglI {Bacillus subtilis [TaxId: 1423]}
Probab=2.68 E-value=1.7e+02 Score=12.64 Aligned_cols=20 Identities=35% Similarity=0.499 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHEEHHHEE
Q ss_conf 01111000024300010115
Q 537021.9.peg.2 17 GKMRSLTDNRCSRTISRIQL 36 (45)
Q Consensus 17 gkmrsltdnrcsrtisriql 36 (45)
-.|+|||.+--...+++|.+
T Consensus 218 Y~m~slt~~d~gqpl~~i~~ 237 (299)
T d1dmua_ 218 YAMRSLTKGDTGQSLYKIKL 237 (299)
T ss_dssp EEEGGGSTTCCCEEEEEEEE
T ss_pred HHHHHCCCCCCCCEEEEEEE
T ss_conf 33331025778835567899
No 2
>d1rm6b2 d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain {Thauera aromatica [TaxId: 59405]}
Probab=2.31 E-value=2.3e+02 Score=12.08 Aligned_cols=15 Identities=20% Similarity=0.330 Sum_probs=11.5
Q ss_pred CCCCCHHHHHHHHHH
Q ss_conf 011486562020111
Q 537021.9.peg.2 6 STVFSPEVRNMGKMR 20 (45)
Q Consensus 6 stvfspevrnmgkmr 20 (45)
+.+-||.+||||.+-
T Consensus 99 ~~~as~qIRN~aTiG 113 (216)
T d1rm6b2 99 ESVAGPTHRAAATLG 113 (216)
T ss_dssp HHSSCHHHHHHCBHH
T ss_pred HHHCCHHHHCCEECC
T ss_conf 987799996872224
No 3
>d2vxfa1 b.38.1.5 (A:6-85) LSM14 homolog A (Lsm14a) {Zebrafish (Danio rerio) [TaxId: 7955]}
Probab=1.67 E-value=1.5e+02 Score=12.83 Aligned_cols=15 Identities=40% Similarity=0.439 Sum_probs=12.3
Q ss_pred CHHCCCCCHHHHHHH
Q ss_conf 001011486562020
Q 537021.9.peg.2 3 FIDSTVFSPEVRNMG 17 (45)
Q Consensus 3 fidstvfspevrnmg 17 (45)
..+||+.--.||.+|
T Consensus 26 ~~~sTi~L~nVrsfG 40 (80)
T d2vxfa1 26 TENSTVALAKVRSFG 40 (80)
T ss_dssp TTTTEEEEEEEEECC
T ss_pred CCCCEEEEEEEEEEE
T ss_conf 634789914315862
No 4
>d1xn8a_ a.229.1.1 (A:) Hypothetical protein YqbG {Bacillus subtilis [TaxId: 1423]}
Probab=1.58 E-value=3.2e+02 Score=11.39 Aligned_cols=12 Identities=25% Similarity=0.465 Sum_probs=4.6
Q ss_pred CHHCCCCCHHHHH
Q ss_conf 0010114865620
Q 537021.9.peg.2 3 FIDSTVFSPEVRN 15 (45)
Q Consensus 3 fidstvfspevrn 15 (45)
.|+-||| |||+|
T Consensus 9 li~Ytv~-~~VK~ 20 (131)
T d1xn8a_ 9 LKSYSVF-ESVKT 20 (131)
T ss_dssp HHHHCCC-HHHHH
T ss_pred HHHHHHH-HHHHC
T ss_conf 8876627-98863
No 5
>d1ffvc2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Hydrogenophaga pseudoflava [TaxId: 47421]}
Probab=1.53 E-value=3.7e+02 Score=11.10 Aligned_cols=21 Identities=24% Similarity=0.428 Sum_probs=12.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 011486562020111100002430
Q 537021.9.peg.2 6 STVFSPEVRNMGKMRSLTDNRCSR 29 (45)
Q Consensus 6 stvfspevrnmgkmrsltdnrcsr 29 (45)
+.+-||.+||+|.. -.|-|..
T Consensus 99 ~~~as~qIRn~aTi---GGni~~~ 119 (177)
T d1ffvc2 99 KLIADPQVRNRGTI---GGDIAHG 119 (177)
T ss_dssp GGSSCTTGGGTCBH---HHHHHTC
T ss_pred HCCCCHHHEEEEEE---CCCEEEC
T ss_conf 53589215689985---3636651
No 6
>d1vcva1 c.1.10.1 (A:1-226) Deoxyribose-phosphate aldolase DeoC {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=1.51 E-value=3e+02 Score=11.54 Aligned_cols=12 Identities=17% Similarity=0.542 Sum_probs=6.3
Q ss_pred CCHHCCCCCHHH
Q ss_conf 400101148656
Q 537021.9.peg.2 2 EFIDSTVFSPEV 13 (45)
Q Consensus 2 efidstvfspev 13 (45)
.|||.|...|+.
T Consensus 3 ~~ID~TlL~p~~ 14 (226)
T d1vcva1 3 HLVDYALLKPYL 14 (226)
T ss_dssp GGEEEECCCTTC
T ss_pred CHHCCCCCCCCC
T ss_conf 501105899999
No 7
>d1jroa4 d.145.1.3 (A:179-345) Xanthine dehydrogenase chain A, domain 3 {Rhodobacter capsulatus [TaxId: 1061]}
Probab=1.48 E-value=3.9e+02 Score=11.04 Aligned_cols=21 Identities=19% Similarity=0.246 Sum_probs=12.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 011486562020111100002430
Q 537021.9.peg.2 6 STVFSPEVRNMGKMRSLTDNRCSR 29 (45)
Q Consensus 6 stvfspevrnmgkmrsltdnrcsr 29 (45)
..+-+|.+||||. +-.|-|..
T Consensus 90 ~~ia~~qIRn~aT---iGGNl~~a 110 (167)
T d1jroa4 90 RRFASEQVRQVAT---IGGNIANG 110 (167)
T ss_dssp HTSSCHHHHTTCB---HHHHHHHC
T ss_pred HHHCCHHHHEEEE---ECCCEEEC
T ss_conf 8634875622557---52522333
No 8
>d1rutx3 g.39.1.3 (X:83-113) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=1.41 E-value=4e+02 Score=10.97 Aligned_cols=15 Identities=27% Similarity=0.612 Sum_probs=10.9
Q ss_pred HHHHHEEHHHEEEEE
Q ss_conf 024300010115556
Q 537021.9.peg.2 25 NRCSRTISRIQLDLR 39 (45)
Q Consensus 25 nrcsrtisriqldlr 39 (45)
.+|.+.|+.-++-.|
T Consensus 6 a~C~~~I~~~e~VmR 20 (31)
T d1rutx3 6 SACGQSIPASELVMR 20 (31)
T ss_dssp TTTCCEECTTSEEEE
T ss_pred CCCCCCCCHHHHHEE
T ss_conf 000586786685200
No 9
>d1u3em1 d.4.1.3 (M:1-105) Intron-encoded homing endonuclease I-HmuI {Bacteriophage SP01 [TaxId: 10685]}
Probab=1.37 E-value=2.4e+02 Score=11.98 Aligned_cols=27 Identities=26% Similarity=0.436 Sum_probs=17.4
Q ss_pred CCCHHCCCCC--HHHHHHHHHHHHHHHHH
Q ss_conf 9400101148--65620201111000024
Q 537021.9.peg.2 1 MEFIDSTVFS--PEVRNMGKMRSLTDNRC 27 (45)
Q Consensus 1 mefidstvfs--pevrnmgkmrsltdnrc 27 (45)
||+-+-.-|. -+|-++|..+|...++.
T Consensus 1 meWk~i~~~~~~Y~vS~~Grv~~~~~~~~ 29 (105)
T d1u3em1 1 MEWKDIKGYEGHYQVSNTGEVYSIKSGKT 29 (105)
T ss_dssp CCEEECTTSTTTEEEETTSCEEESSSCSE
T ss_pred CCCEECCCCCCEEEECCCCCEEECCCCEE
T ss_conf 98719899777058869977897639979
No 10
>d1pvza_ g.3.7.2 (A:) K+ toxin-like peptide Bmp07 (BmKK2) {Chinese scorpion (Buthus martensi karsch) [TaxId: 34649]}
Probab=1.37 E-value=3.3e+02 Score=11.35 Aligned_cols=11 Identities=45% Similarity=0.881 Sum_probs=0.0
Q ss_pred HHHHHHHHHHH
Q ss_conf 11100002430
Q 537021.9.peg.2 19 MRSLTDNRCSR 29 (45)
Q Consensus 19 mrsltdnrcsr 29 (45)
.|-.||..|+|
T Consensus 5 vrc~td~dc~r 15 (31)
T d1pvza_ 5 IKCATDADCSR 15 (31)
T ss_dssp EECSSHHHHHH
T ss_pred EEEECCHHHHH
T ss_conf 88603420554
Done!