RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= 537021.9.peg.26_1
         (49 letters)



>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme,
          transferase; HET: 2OS PLP; 1.80A {Synechocystis SP}
          (A:1-37,A:302-420)
          Length = 156

 Score = 24.1 bits (52), Expect = 7.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 1  MTNIPIPFPISIPRKYFHILISKKNKNP 28
          M  + IP   +  R+ F IL  + N +P
Sbjct: 1  MVALQIPSLAATVRQDFPILNQEINGHP 28


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.313    0.131    0.376 

Gapped
Lambda     K      H
   0.267   0.0591    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 334,733
Number of extensions: 9093
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 2
Length of query: 49
Length of database: 4,956,049
Length adjustment: 20
Effective length of query: 29
Effective length of database: 4,279,949
Effective search space: 124118521
Effective search space used: 124118521
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 50 (23.3 bits)