BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 537021.9.peg.26_1
         (49 letters)

Database: las_proteome 
           1233 sequences; 328,796 total letters

Searching...................................................done



>537021.9.peg.26_1 
          Length = 49

 Score = 97.4 bits (241), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/49 (100%), Positives = 49/49 (100%)

Query: 1  MTNIPIPFPISIPRKYFHILISKKNKNPNASLTKKKRSDSEKGIHTKNN 49
          MTNIPIPFPISIPRKYFHILISKKNKNPNASLTKKKRSDSEKGIHTKNN
Sbjct: 1  MTNIPIPFPISIPRKYFHILISKKNKNPNASLTKKKRSDSEKGIHTKNN 49


>gi|255764499|ref|YP_003064993.2| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 266

 Score = 20.0 bits (40), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 7   PFPISIPRKYFHILISKKNKNPNASLTKKKRSD 39
           P P  IPRK F   + +K ++ + +L  +   D
Sbjct: 210 PIPAGIPRKIFFAELQEKMEHASNNLLLETIRD 242


  Database: las_proteome
    Posted date:  Jun 5, 2011  6:30 PM
  Number of letters in database: 328,796
  Number of sequences in database:  1233
  
Lambda     K      H
   0.313    0.131    0.376 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,316
Number of Sequences: 1233
Number of extensions: 1143
Number of successful extensions: 3
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 49
length of database: 328,796
effective HSP length: 22
effective length of query: 27
effective length of database: 301,670
effective search space:  8145090
effective search space used:  8145090
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.0 bits)
S2: 31 (16.5 bits)