HHsearch alignment for GI: peg_33 and conserved domain: TIGR00719
>TIGR00719 sda_beta L-serine dehydratase, iron-sulfur-dependent, beta subunit; InterPro: IPR004643 L-serine dehydratase, also called serine deaminase, catalyses the conversion of L-serine and water to pyruvate and ammonia during gluconeogenesis from serine. The enzyme forms a heterooctamer of four alpha chains and four beta chains. This family describes the beta chain of an iron-sulphur-dependent L-serine dehydratase of the Firmicutes and Deinococcus radiodurans. A fairly deep split in a UPGMA tree separates members of this family of beta chains from the homologous region of single chain forms such as found in Escherichia coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases.; GO: 0003941 L-serine ammonia-lyase activity, 0006094 gluconeogenesis.
Probab=99.65 E-value=2.2e-16 Score=107.26 Aligned_cols=82 Identities=18% Similarity=0.398 Sum_probs=79.7
Q ss_pred CCCCEEEEEEECCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCHHHHH
Q ss_conf 55873789997998997657983999998287866889998997369963227742147898189999947889989999
Q 537021.9.peg.3 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81 (100)
Q Consensus 2 fg~g~~riv~i~g~~v~~~~~~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i~~~vl~ 81 (100)
T Consensus 127 IGGG~~~I~~~NG~~~~l~G~~~~IL~~~~~~~G~I~~V~~~L~~~~~N~~~l~~~~~~~~~~~~lT~E~D~~~~~~~~~ 206 (208)
T TIGR00719 127 IGGGKIKIVELNGIELRLRGEYSAILLVYNDKFGVIAYVASLLAKFEINVESLEVKKKDLTNLVLLTVEVDKNLDDSLKD 206 (208)
T ss_pred ECCCEEEEEEECCEEEEEECCCCEEEEEECCCCCEEHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCHHHHHH
T ss_conf 26873799851656999707864799986687423001024450351011134544430032899999816881057674
Q ss_pred HH
Q ss_conf 98
Q 537021.9.peg.3 82 KL 83 (100)
Q Consensus 82 ~i 83 (100)
T Consensus 207 ~~ 208 (208)
T TIGR00719 207 EL 208 (208)
T ss_pred CC
T ss_conf 19