HHsearch alignment for GI: peg_33 and conserved domain: cd04873
>cd04873 ACT_UUR-ACR-like ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD. This ACT domain family, ACT_UUR_ACR-like, includes the two C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD; including those enzymes similar to the GlnD found in enteric Escherichia coli and those found in photosynthetic, nitrogen-fixing bacterium Rhodospirillum rubrum. Also included in this CD are the four ACT domains of a novel protein composed almost entirely of ACT domain repeats (the ACR protein) and like proteins. These ACR proteins, found in Arabidopsis and Oryza, are proposed to function as novel regulatory or sensor proteins in plants. This CD also includes the first of the two ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein and related domains, as well as, the N-terminal ACT domain of a yet characterized Arabidopsis/Oryza predicted t
Probab=96.75 E-value=0.014 Score=34.48 Aligned_cols=59 Identities=15% Similarity=0.338 Sum_probs=44.6
Q ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEE----CCCCCHHHHHHHHC
Q ss_conf 99999828786688999899736996322774214789818999994----78899899999864
Q 537021.9.peg.3 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI----DGSILNSVLEKLSV 85 (100)
Q Consensus 25 ~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~v----D~~i~~~vl~~i~~ 85 (100)
T Consensus 2 ~i~i~~~DrpgLl~~i~~~l~~~~l~I~~A~I~T~--~~~~~D~F~V~d~~g~~~~~~~~~~l~~ 64 (70)
T cd04873 2 VVEVYAPDRPGLLADITRVLADLGLNIHDARISTT--GERALDVFYVTDSDGRPLDPERIARLEE 64 (70)
T ss_pred EEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEEC--CCEEEEEEEEECCCCCCCCHHHHHHHHH
T ss_conf 89999689788999999999887950779999964--9989999999889969399999999999