HHsearch alignment of GI: peg_33 and MMDB domain: 1u8s_A_1-86
>1u8s_A (A:1-86) Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae}
Probab=97.71 E-value=4e-05 Score=47.54 Aligned_cols=63 Identities=24% Similarity=0.246 Sum_probs=48.9
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCC--CHHHHHHHHCC
Q ss_conf 983999998287866889998997369963227742147898189999947889--98999998649
Q 537021.9.peg.3 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI--LNSVLEKLSVN 86 (100)
Q Consensus 22 ~~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i--~~~vl~~i~~~ 86 (100)
+...|.+.-.|+||+++.|++.|+++|+||....... .++.-.|.+.++.+. .+++.++++.+
T Consensus 5 ~~~vitv~g~DrpGiva~is~~la~~g~nI~~~~~~~--~~~~f~~~~~~~~~~~~~~~l~~~l~~~ 69 (86)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAM--FGKEFTLLMLISGSPSNITRVETTLPLL 69 (86)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE--ETTEEEEEEEEEECHHHHHHHHHHHHHH
T ss_pred EEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEE--ECCCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 1899999926988599999999998799599858899--8796299998505845667899999998