Query 537021.9.peg.33_1
Match_columns 100
No_of_seqs 109 out of 961
Neff 6.6
Searched_HMMs 23785
Date Sun May 22 14:43:45 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_33.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygy_A PGDH, D-3-phosphoglycer 100.0 4.6E-34 1.9E-38 199.3 13.5 98 1-98 431-529 (529)
2 3k5p_A D-3-phosphoglycerate de 99.6 1.7E-16 7.2E-21 106.7 5.2 87 7-95 327-415 (416)
3 1sc6_A PGDH, D-3-phosphoglycer 99.5 1.6E-14 6.9E-19 96.3 7.5 73 21-95 329-403 (404)
4 1y7p_A Hypothetical protein AF 98.9 6.1E-09 2.6E-13 66.9 9.3 73 24-96 5-80 (223)
5 2ko1_A CTR148A, GTP pyrophosph 98.8 1.1E-08 4.6E-13 65.6 7.4 70 25-96 7-79 (88)
6 2fgc_A Acetolactate synthase, 98.2 1E-05 4.2E-10 49.9 9.2 76 20-95 26-103 (193)
7 2pc6_A Probable acetolactate s 98.1 8.2E-06 3.5E-10 50.4 7.6 72 24-95 5-78 (165)
8 2f1f_A Acetolactate synthase i 98.1 7.3E-06 3E-10 50.7 7.2 74 22-95 2-77 (164)
9 3n0v_A Formyltetrahydrofolate 97.9 8.1E-05 3.4E-09 45.1 8.9 59 17-75 2-60 (286)
10 1zpv_A ACT domain protein; str 97.8 0.00012 4.9E-09 44.3 8.1 63 24-86 6-69 (91)
11 3o1l_A Formyltetrahydrofolate 97.6 9.4E-05 4E-09 44.8 6.2 54 22-75 21-74 (302)
12 3lou_A Formyltetrahydrofolate 97.6 0.00012 5.2E-09 44.2 6.4 60 16-75 3-62 (292)
13 2nyi_A Unknown protein; protei 97.6 0.00034 1.4E-08 41.9 8.1 63 24-86 94-162 (195)
14 3mtj_A Homoserine dehydrogenas 97.4 0.00022 9E-09 42.9 5.9 73 24-97 360-438 (444)
15 3nrb_A Formyltetrahydrofolate 97.4 0.00051 2.1E-08 40.9 7.8 55 22-76 6-60 (287)
16 3obi_A Formyltetrahydrofolate 97.4 0.0002 8.4E-09 43.1 5.7 53 22-74 5-57 (288)
17 2nyi_A Unknown protein; protei 97.2 0.00067 2.8E-08 40.3 6.0 64 23-86 5-68 (195)
18 2f06_A Conserved hypothetical 97.2 0.0037 1.6E-07 36.4 9.6 30 29-58 12-41 (144)
19 1u8s_A Glycine cleavage system 97.0 0.00073 3.1E-08 40.1 4.9 36 24-59 94-129 (192)
20 1u8s_A Glycine cleavage system 97.0 0.0058 2.4E-07 35.4 9.2 47 24-72 7-53 (192)
21 2f06_A Conserved hypothetical 96.8 0.0055 2.3E-07 35.5 8.0 57 25-85 74-130 (144)
22 2qmx_A Prephenate dehydratase; 96.8 0.013 5.5E-07 33.5 9.6 71 22-95 199-275 (283)
23 2qmw_A PDT, prephenate dehydra 96.4 0.017 7.3E-07 32.8 8.4 67 26-95 192-263 (267)
24 3luy_A Probable chorismate mut 96.4 0.016 6.6E-07 33.1 8.1 64 24-88 209-278 (329)
25 3p96_A Phosphoserine phosphata 96.0 0.0092 3.9E-07 34.3 5.2 59 25-84 14-75 (415)
26 3mwb_A Prephenate dehydratase; 95.7 0.025 1.1E-06 32.0 6.2 61 25-86 203-270 (313)
27 3p96_A Phosphoserine phosphata 94.9 0.1 4.3E-06 28.8 7.3 76 7-84 85-163 (415)
28 2dtj_A Aspartokinase; protein- 92.1 0.37 1.6E-05 25.8 6.2 66 22-87 14-81 (178)
29 2re1_A Aspartokinase, alpha an 91.1 0.24 1E-05 26.8 4.5 57 30-87 33-89 (167)
30 3l76_A Aspartokinase; alloster 86.0 1.1 4.7E-05 23.3 5.0 27 30-56 278-304 (600)
31 3mah_A Aspartokinase; aspartat 85.6 1.7 7.1E-05 22.4 5.7 55 31-90 29-83 (157)
32 1phz_A Protein (phenylalanine 84.8 2.1 8.9E-05 21.9 7.4 63 23-85 34-100 (429)
33 1vr9_A CBS domain protein/ACT 84.1 0.16 6.9E-06 27.7 0.0 63 22-85 137-199 (213)
34 2dt9_A Aspartokinase; protein- 82.9 2.5 0.00011 21.4 5.7 28 30-57 24-51 (167)
35 2jsx_A Protein NAPD; TAT, proo 73.8 3.5 0.00015 20.7 4.1 60 33-96 15-76 (95)
36 1tdj_A Biosynthetic threonine 69.5 5.2 0.00022 19.8 4.2 61 23-86 338-402 (514)
37 2jhe_A Transcription regulator 69.1 6.5 0.00027 19.3 6.7 69 25-95 2-70 (190)
38 3c1m_A Probable aspartokinase; 62.9 8.1 0.00034 18.8 4.1 50 31-84 329-378 (473)
39 3ab4_A Aspartokinase; aspartat 58.9 10 0.00043 18.2 5.2 57 30-86 272-332 (421)
40 2cdq_A Aspartokinase; aspartat 58.0 6.2 0.00026 19.4 2.8 27 31-57 352-378 (510)
41 1v6t_A Hypothetical UPF0271 pr 56.8 5.2 0.00022 19.8 2.3 45 7-54 203-250 (255)
42 2j0w_A Lysine-sensitive aspart 52.2 10 0.00043 18.2 3.2 56 31-90 319-381 (449)
43 2dfa_A Hypothetical UPF0271 pr 51.5 13 0.00054 17.7 3.6 45 7-54 203-250 (250)
44 2cvi_A 75AA long hypothetical 42.6 19 0.00081 16.8 4.4 59 32-94 10-71 (83)
45 1xw8_A UPF0271 protein YBGL; N 39.7 12 0.0005 17.9 1.9 46 7-55 198-246 (252)
46 1zhv_A Hypothetical protein AT 38.0 23 0.00097 16.4 3.4 49 31-86 73-121 (134)
47 2zbc_A 83AA long hypothetical 35.5 25 0.0011 16.1 4.3 58 33-94 11-71 (83)
48 2djw_A Probable transcriptiona 33.7 27 0.0011 16.0 4.1 60 32-95 10-72 (92)
49 1qlm_A Methenyltetrahydrometha 30.9 31 0.0013 15.7 3.3 30 60-89 130-159 (316)
50 1lfp_A Hypothetical protein AQ 30.6 31 0.0013 15.7 3.7 56 33-93 176-235 (249)
51 1zvp_A Hypothetical protein VC 28.8 31 0.0013 15.7 2.6 48 32-86 83-130 (133)
52 2nzc_A Hypothetical protein; s 25.6 38 0.0016 15.2 5.8 65 26-91 10-77 (86)
53 3kz5_E Protein SOPB; partition 24.6 31 0.0013 15.7 2.0 21 66-86 22-43 (52)
54 2bj7_A Nickel responsive regul 24.4 41 0.0017 15.1 7.6 74 22-97 55-131 (138)
55 1gh8_A Translation elongation 23.4 42 0.0018 15.0 3.9 61 37-98 23-86 (89)
56 3cjs_B 50S ribosomal protein L 22.3 26 0.0011 16.1 1.2 17 38-54 21-37 (72)
No 1
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosynthesis, structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=4.6e-34 Score=199.34 Aligned_cols=98 Identities=18% Similarity=0.319 Sum_probs=95.2
Q ss_pred CCCCC-EEEEEEECCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCHHH
Q ss_conf 95587-37899979989976579839999982878668899989973699632277421478981899999478899899
Q 537021.9.peg.3 1 VFSDG-KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79 (100)
Q Consensus 1 vfg~g-~~riv~i~g~~v~~~~~~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i~~~v 79 (100)
+||++ .+||++||||++|+.|++|+|+++|+|+|||||+||++||+++|||++|+++|+.+|+.|+|++++|+++|+++
T Consensus 431 v~g~~~~~riv~i~g~~vd~~~~g~~L~~~~~D~PG~Ig~vg~iLg~~~INIa~m~l~R~~~gg~A~~vl~vD~~v~~~v 510 (529)
T 1ygy_A 431 LYGPQLSQKIVQINGRHFDLRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDVPDDV 510 (529)
T ss_dssp EETTTTEEEEEEETTEEEEEESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSCCCHHH
T ss_pred EECCCCCCEEEEECCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCEECCEEECCCCCCEEEEEEECCCCCCHHH
T ss_conf 97898751179999988996078768999827979828899999864797840277503789985899999689999999
Q ss_pred HHHHHCCCCEEEEEEEEEE
Q ss_conf 9998649882999999974
Q 537021.9.peg.3 80 LEKLSVNVTIRFVKQFEFN 98 (100)
Q Consensus 80 l~~i~~~~~v~~vr~i~~~ 98 (100)
+++|++++++.++++++++
T Consensus 511 l~~i~~~~~i~~v~~v~L~ 529 (529)
T 1ygy_A 511 RTAIAAAVDAYKLEVVDLS 529 (529)
T ss_dssp HHHHHHHHTEEEEEEEECC
T ss_pred HHHHHCCCCCEEEEEEEEC
T ss_conf 9998628795389999709
No 2
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infectious disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.63 E-value=1.7e-16 Score=106.69 Aligned_cols=87 Identities=16% Similarity=0.140 Sum_probs=76.6
Q ss_pred EEEEEECCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEC--CCCCHHHHHHHH
Q ss_conf 789997998997657983999998287866889998997369963227742147898189999947--889989999986
Q 537021.9.peg.3 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID--GSILNSVLEKLS 84 (100)
Q Consensus 7 ~riv~i~g~~v~~~~~~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD--~~i~~~vl~~i~ 84 (100)
..-|+++...++..++.+++++.|+|+|||+|+++++|+++++||++|.. +++|+.||+++++| ++++++++++|+
T Consensus 327 ~~~vN~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ni~~~~~--~~~~~~~y~~~d~~~~~~~~~~~~~~~~ 404 (416)
T 3k5p_A 327 VGAVNFPQVQLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFL--QTDGEVGYLVMEADGVGEASDAVLQEIR 404 (416)
T ss_dssp TTBSSSCCCCCCCCSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEE--EECSSCEEEEEEECCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHC--CCCCCEEEEEEEECCCCCCCHHHHHHHH
T ss_conf 54142877567767888559986036443999999999766998888640--1567467999972467765699999997
Q ss_pred CCCCEEEEEEE
Q ss_conf 49882999999
Q 537021.9.peg.3 85 VNVTIRFVKQF 95 (100)
Q Consensus 85 ~~~~v~~vr~i 95 (100)
+++++.+||++
T Consensus 405 ~~~~v~~~r~~ 415 (416)
T 3k5p_A 405 EIPGTIRARLL 415 (416)
T ss_dssp TSTTEEEEEEE
T ss_pred HCCCEEEEEEE
T ss_conf 18888999974
No 3
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.53 E-value=1.6e-14 Score=96.26 Aligned_cols=73 Identities=18% Similarity=0.243 Sum_probs=65.4
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEE--CCCCCHHHHHHHHCCCCEEEEEEE
Q ss_conf 798399999828786688999899736996322774214789818999994--788998999998649882999999
Q 537021.9.peg.3 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTIRFVKQF 95 (100)
Q Consensus 21 ~~~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~v--D~~i~~~vl~~i~~~~~v~~vr~i 95 (100)
..+++++++|+|+|||+|+|+++|+++++||+.|.. +++++.||.++++ |++++++++++|+++++|.+||++
T Consensus 329 ~~~~r~~~~~~n~pgvl~~i~~~l~~~~~ni~~~~~--~~~~~~~~~~~di~~~~~~~~~~~~~l~~~~~vi~~r~~ 403 (404)
T 1sc6_A 329 HGGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYL--QTSAQMGYVVIDIEADEDVAEKALQAMKAIPGTIRARLL 403 (404)
T ss_dssp CSSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEE--EECSSEEEEEEEEECCHHHHHHHHHHHHTSTTEEEEEEC
T ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHC--CCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEE
T ss_conf 787489998358776689999999876998799753--677545699999844787549999999738988999860
No 4
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=98.92 E-value=6.1e-09 Score=66.86 Aligned_cols=73 Identities=19% Similarity=0.230 Sum_probs=62.7
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCC---CCEEEEEEEECCCCCHHHHHHHHCCCCEEEEEEEE
Q ss_conf 39999982878668899989973699632277421478---98189999947889989999986498829999999
Q 537021.9.peg.3 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS---TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96 (100)
Q Consensus 24 ~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~---g~~A~~ii~vD~~i~~~vl~~i~~~~~v~~vr~i~ 96 (100)
+.|-+...|+||++++|+++++++++||.+++.+.... .+.+.+.++++..--++++++|+++|+|.+|+...
T Consensus 5 ~aL~I~a~DRpGVLadIT~IIAe~giNI~sI~q~i~~~g~~~g~~~I~~EiE~~dle~LI~kLr~L~~V~~Ve~h~ 80 (223)
T 1y7p_A 5 RGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGGDFEKILERVKTFDYIIEIEEEE 80 (223)
T ss_dssp EEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSSCHHHHHHHHHTCTTEEEEEEEC
T ss_pred EEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEC
T ss_conf 8999999568896999999999669996679851346887644999999814578999999997799960899977
No 5
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.81 E-value=1.1e-08 Score=65.56 Aligned_cols=70 Identities=20% Similarity=0.217 Sum_probs=57.1
Q ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEC---CCCCHHHHHHHHCCCCEEEEEEEE
Q ss_conf 999998287866889998997369963227742147898189999947---889989999986498829999999
Q 537021.9.peg.3 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96 (100)
Q Consensus 25 ~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD---~~i~~~vl~~i~~~~~v~~vr~i~ 96 (100)
.|-+...|+||+++.|+++|++.++||.++.... +.+.+.+.+.++ .+--+.++++|+++|+|.+|+.++
T Consensus 7 ~L~I~~~Dr~GlL~dIt~~is~~~inI~~i~~~~--~~~~~~~~i~v~V~d~~~L~~li~~L~~i~~V~~V~Rv~ 79 (88)
T 2ko1_A 7 GIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNA--KDGIFTCNLMIFVKNTDKLTTLMDKLRKVQGVFTVERLS 79 (88)
T ss_dssp EEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEE--CSSEEEEEEEEEESSHHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred EEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEEE--CCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 9999997788879999999987797399999970--499799999999987788999999997799987999973
No 6
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima MSB8} SCOP: d.58.18.6 d.58.18.6
Probab=98.19 E-value=1e-05 Score=49.93 Aligned_cols=76 Identities=16% Similarity=0.283 Sum_probs=63.6
Q ss_pred ECCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEE--CCCCCHHHHHHHHCCCCEEEEEEE
Q ss_conf 5798399999828786688999899736996322774214789818999994--788998999998649882999999
Q 537021.9.peg.3 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTIRFVKQF 95 (100)
Q Consensus 20 ~~~~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~v--D~~i~~~vl~~i~~~~~v~~vr~i 95 (100)
....|+|.+.=+|+||++++|+.+|+..|+||.++.++.....+..=|.+.+ |...-+.+...+.++-+|..|..+
T Consensus 26 ~~~~~~isvlVeN~pGvL~RV~glFsrRg~NIeSLsv~~te~~~iSRmTIv~~~~~~~i~qi~kQl~KLIdVi~V~dl 103 (193)
T 2fgc_A 26 QIREHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGDDKTIEQIEKQAYKLVEVVKVTPI 103 (193)
T ss_dssp -CEEEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEECTTHHHHHHHHHTTSTTEEEEEEC
T ss_pred CCEEEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 210899999997878889999999864896854678502588884899999648989999999998637776899873
No 7
>2pc6_A Probable acetolactate synthase isozyme III (small subunit); regulatory subunit, structural genomics, PSI; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=98.12 E-value=8.2e-06 Score=50.36 Aligned_cols=72 Identities=13% Similarity=0.224 Sum_probs=60.6
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEE--CCCCCHHHHHHHHCCCCEEEEEEE
Q ss_conf 399999828786688999899736996322774214789818999994--788998999998649882999999
Q 537021.9.peg.3 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTIRFVKQF 95 (100)
Q Consensus 24 ~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~v--D~~i~~~vl~~i~~~~~v~~vr~i 95 (100)
|+|-+.=+|+||++++|+.+|+..|+||.+..++.....+..=|.+.+ |+..-+.+...|.++.+|.+|..+
T Consensus 5 ~~isvlveN~pGvL~rv~glFsrRg~NIeSL~v~~te~~~iSR~Tiv~~g~~~~i~qi~kQL~KLidV~~V~dl 78 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGPDEIVEQITKQLNKLIEVVKLIDL 78 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEECHHHHHHHHHHHHHSTTEEEEEEG
T ss_pred EEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 99999998785699999999862674357888732479980799999977889999999999678467999945
No 8
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=98.12 E-value=7.3e-06 Score=50.66 Aligned_cols=74 Identities=15% Similarity=0.230 Sum_probs=61.2
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEE--CCCCCHHHHHHHHCCCCEEEEEEE
Q ss_conf 98399999828786688999899736996322774214789818999994--788998999998649882999999
Q 537021.9.peg.3 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTIRFVKQF 95 (100)
Q Consensus 22 ~~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~v--D~~i~~~vl~~i~~~~~v~~vr~i 95 (100)
+.|++.+.=+|+||++++|+.+|+..|+||.+..++.....+..-|.+.+ |+..-+.+...|.++..|.+|..+
T Consensus 2 ~k~~isvlveN~pGvL~Rv~glFsrRg~NI~SL~v~~te~~~~SR~Tiv~~g~~~~i~qi~kQL~KlidVi~V~~~ 77 (164)
T 2f1f_A 2 ARRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHKLVDVLRVSEL 77 (164)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEG
T ss_pred CEEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 5599999998786799999999851675456788723379991799999989999999999998377358998518
No 9
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.87 E-value=8.1e-05 Score=45.12 Aligned_cols=59 Identities=12% Similarity=0.022 Sum_probs=51.9
Q ss_pred EEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCC
Q ss_conf 97657983999998287866889998997369963227742147898189999947889
Q 537021.9.peg.3 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75 (100)
Q Consensus 17 v~~~~~~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i 75 (100)
+...|+.+.|.+.=.|+||+++.|++.|+++|.||...+-..+...+.-+|-++.+.+-
T Consensus 2 m~~~~~~~IL~i~CpD~~GiVa~vt~~l~~~g~NI~~~~qf~D~~~~~FFmR~~f~~~~ 60 (286)
T 3n0v_A 2 MSRAPDTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD 60 (286)
T ss_dssp -----CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS
T ss_pred CCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEECCC
T ss_conf 98998808999989999865999999999789987466112268888489999997699
No 10
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Streptococcus pneumoniae TIGR4} SCOP: d.58.18.7
Probab=97.76 E-value=0.00012 Score=44.31 Aligned_cols=63 Identities=19% Similarity=0.196 Sum_probs=44.1
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCC-HHHHHHHHCC
Q ss_conf 39999982878668899989973699632277421478981899999478899-8999998649
Q 537021.9.peg.3 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-NSVLEKLSVN 86 (100)
Q Consensus 24 ~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i~-~~vl~~i~~~ 86 (100)
..|.+.-.|+||+++.+++.|+++|+||...+-.....--...+.++.+...+ +++.+++..+
T Consensus 6 ~vitv~g~DrpGIva~vt~~L~~~g~NI~d~~q~~~~~~F~~~~~v~~~~~~~~~~l~~~l~~l 69 (91)
T 1zpv_A 6 AIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSDEKQDFTYLRNEFEAF 69 (91)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 9999990897878999999999879949984508953712899999649999999999999999
No 11
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.64 E-value=9.4e-05 Score=44.78 Aligned_cols=54 Identities=19% Similarity=0.089 Sum_probs=47.0
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCC
Q ss_conf 983999998287866889998997369963227742147898189999947889
Q 537021.9.peg.3 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75 (100)
Q Consensus 22 ~~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i 75 (100)
..+.|++.=.|+||+++.|++.|+++|.||...+-..+...+.-+|-++.+.+.
T Consensus 21 ~~~iL~i~CpD~~GIVa~Vs~~L~~~g~NI~e~~qf~D~~~~~FFmR~~f~~~~ 74 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADT 74 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGG
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEECCC
T ss_conf 269999999999873999999999789988273354489999289999997089
No 12
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.61 E-value=0.00012 Score=44.17 Aligned_cols=60 Identities=7% Similarity=0.024 Sum_probs=50.1
Q ss_pred EEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCC
Q ss_conf 997657983999998287866889998997369963227742147898189999947889
Q 537021.9.peg.3 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75 (100)
Q Consensus 16 ~v~~~~~~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i 75 (100)
.+.-.|..+.|.+.-.|+||+++.|++.|+++|.||...+-.-+...+.-+|-++.+.+.
T Consensus 3 ~~~~~~~~~iL~i~CpD~~GiVa~vs~~l~~~g~nI~~~~qf~D~~~~~FFmR~~f~~~~ 62 (292)
T 3lou_A 3 SVPQRPHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATD 62 (292)
T ss_dssp -----CCEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC
T ss_pred CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEECCC
T ss_conf 999999738999989998864999999999789999787344488888078989997268
No 13
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=97.55 E-value=0.00034 Score=41.87 Aligned_cols=63 Identities=19% Similarity=0.188 Sum_probs=38.3
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCC--CCCEEEEE----EEECCCCCHHHHHHHHCC
Q ss_conf 3999998287866889998997369963227742147--89818999----994788998999998649
Q 537021.9.peg.3 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ--STEHAISF----LCIDGSILNSVLEKLSVN 86 (100)
Q Consensus 24 ~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~--~g~~A~~i----i~vD~~i~~~vl~~i~~~ 86 (100)
+.+-+...|+||.+++++..|+++++||.+++..... ..+..+.. +.+-....+++.++|+++
T Consensus 94 ~vv~v~~~DrpGLL~~it~~La~~~inI~~~~~~~~~~~~~~~~~F~~~~~i~~p~~~~~~l~~~L~~l 162 (195)
T 2nyi_A 94 YELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFPFPLYQEVVTALSRV 162 (195)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEEGGGHHHHHHHHHHH
T ss_pred EEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
T ss_conf 999995068878999999999766951998021266167678852899999967967589999999999
No 14
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.44 E-value=0.00022 Score=42.89 Aligned_cols=73 Identities=16% Similarity=0.190 Sum_probs=47.6
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEE-ECCCCCCEEEEEEEECCCCC----HHHHHHHHCCCCEEE-EEEEEE
Q ss_conf 399999828786688999899736996322774-21478981899999478899----899999864988299-999997
Q 537021.9.peg.3 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHL-GRSQSTEHAISFLCIDGSIL----NSVLEKLSVNVTIRF-VKQFEF 97 (100)
Q Consensus 24 ~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l-~r~~~g~~A~~ii~vD~~i~----~~vl~~i~~~~~v~~-vr~i~~ 97 (100)
+-|-+.-.|+||++++|+++|++++|+|+++.- .+....+.+-.++-+ .+.+ ++++++|++++.+.. ...+++
T Consensus 360 yYlRl~v~D~pGVLa~It~ifa~~~ISIesv~Q~~~~~~~~~~~iVIiT-h~~~e~~l~~al~~L~~l~~V~~~~~~iRI 438 (444)
T 3mtj_A 360 YYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLT-HVTLEKNVNAAIAKIEALDAVAGKVMRIRL 438 (444)
T ss_dssp EEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEE-CSEEHHHHHHHHHHHTTSTTBCSCCEEEEE
T ss_pred EEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEC-CCCCHHHHHHHHHHHHCCCCCCCCCEEEEE
T ss_conf 6999991776277999999998759863333435777788703499993-849899999999998658864678519980
No 15
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.44 E-value=0.00051 Score=40.92 Aligned_cols=55 Identities=16% Similarity=0.195 Sum_probs=48.2
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCC
Q ss_conf 9839999982878668899989973699632277421478981899999478899
Q 537021.9.peg.3 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL 76 (100)
Q Consensus 22 ~~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i~ 76 (100)
..+.|.+.=.|+||+++.|++.|+++|.||...+-..+...+.-+|-++.+.+..
T Consensus 6 ~~~ILt~~CpD~~GIVa~vs~~l~~~g~NI~~~~q~~D~~~~~FFmRi~f~~~~~ 60 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIPVA 60 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCC-
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEECCCC
T ss_conf 7699999899988659999999997899882740534899980899999975889
No 16
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.44 E-value=0.0002 Score=43.06 Aligned_cols=53 Identities=21% Similarity=0.227 Sum_probs=46.6
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCC
Q ss_conf 98399999828786688999899736996322774214789818999994788
Q 537021.9.peg.3 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74 (100)
Q Consensus 22 ~~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~ 74 (100)
..+.|.+.-.|+||+++.|++.|+++|.||-...-..+...+.-+|-++.+.+
T Consensus 5 ~~~IL~i~CpD~~GIVa~Vs~~l~~~g~NI~~~~qf~D~~~~~FFmR~~f~~~ 57 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAA 57 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEES
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEECC
T ss_conf 81899998999885599999999978998827103347888808999999638
No 17
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=97.18 E-value=0.00067 Score=40.30 Aligned_cols=64 Identities=13% Similarity=0.140 Sum_probs=49.3
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHCC
Q ss_conf 8399999828786688999899736996322774214789818999994788998999998649
Q 537021.9.peg.3 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVN 86 (100)
Q Consensus 23 ~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i~~~vl~~i~~~ 86 (100)
...+.+.-.|+||+++.++++|+++|+||...+..+....-...+.+..+..-...+.+.+.+.
T Consensus 5 ~~vitv~g~DrpGlva~vt~~L~~~g~nI~ds~~~~~~~~~~~~~~v~~~~~~~~~l~~~l~~~ 68 (195)
T 2nyi_A 5 SFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLNAKDGKLIQSALESA 68 (195)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSSSSHHHHHHHHHH
T ss_pred EEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHH
T ss_conf 9999999269887899999999987997998585882477289987401343102257789998
No 18
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein structure initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: d.58.18.11 d.58.18.11
Probab=97.16 E-value=0.0037 Score=36.35 Aligned_cols=30 Identities=17% Similarity=0.248 Sum_probs=16.2
Q ss_pred EECCCCCHHHHHHHHHHHCCCCEEEEEEEC
Q ss_conf 982878668899989973699632277421
Q 537021.9.peg.3 29 VNADILGIVVFVGNILGEYGINIAHFHLGR 58 (100)
Q Consensus 29 ~~~D~PG~I~~v~~~L~~~~INIa~m~l~r 58 (100)
.=.|+||+++++.+.|+++||||..+..+.
T Consensus 12 ~v~n~pG~la~v~~~la~~ginId~is~~~ 41 (144)
T 2f06_A 12 FLENKSGRLTEVTEVLAKENINLSALCIAE 41 (144)
T ss_dssp EECSSSSHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEEEEC
T ss_conf 968963399999999998695599999424
No 19
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=97.02 E-value=0.00073 Score=40.10 Aligned_cols=36 Identities=14% Similarity=0.222 Sum_probs=30.4
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECC
Q ss_conf 399999828786688999899736996322774214
Q 537021.9.peg.3 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRS 59 (100)
Q Consensus 24 ~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~ 59 (100)
+.+.+.-.|+||.+++|+..|+++++||..++....
T Consensus 94 ~~v~v~g~DrpGlL~~It~~la~~~inI~~l~~~t~ 129 (192)
T 1u8s_A 94 VEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTI 129 (192)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred EEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf 999999517626899999999867997005899842
No 20
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=96.98 E-value=0.0058 Score=35.36 Aligned_cols=47 Identities=23% Similarity=0.239 Sum_probs=36.0
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEC
Q ss_conf 3999998287866889998997369963227742147898189999947
Q 537021.9.peg.3 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72 (100)
Q Consensus 24 ~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD 72 (100)
-.+.+.-.|+||+++.++.+|+++|+||...+..+.. +...+++-+.
T Consensus 7 lvItv~g~DrpGiva~ia~~l~~~g~ni~ds~~~~~~--~~f~~~~~v~ 53 (192)
T 1u8s_A 7 LVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFG--KEFTLLMLIS 53 (192)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEET--TEEEEEEEEE
T ss_pred EEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEC--CEEEEEEEEE
T ss_conf 9999993599859999999999879969972788999--8489999971
No 21
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein structure initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: d.58.18.11 d.58.18.11
Probab=96.82 E-value=0.0055 Score=35.49 Aligned_cols=57 Identities=16% Similarity=0.139 Sum_probs=43.8
Q ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHC
Q ss_conf 9999982878668899989973699632277421478981899999478899899999864
Q 537021.9.peg.3 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85 (100)
Q Consensus 25 ~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i~~~vl~~i~~ 85 (100)
.+...-+|+||+++++...|++++|||..++.+.. +..+..++..+. ++.+++.|++
T Consensus 74 vvg~~m~~~~G~~a~i~~~L~~~~INI~~i~~~~s--~~~~~~vi~~~D--~~~a~~~L~~ 130 (144)
T 2f06_A 74 VVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFAN--NNVANVVIRPSN--MDKCIEVLKE 130 (144)
T ss_dssp EEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEE--TTEEEEEEEESC--HHHHHHHHHH
T ss_pred EEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECC--CCCEEEEEECCC--HHHHHHHHHH
T ss_conf 77247667850899999999868998798752337--783699997365--9999999998
No 22
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=96.78 E-value=0.013 Score=33.50 Aligned_cols=71 Identities=17% Similarity=0.152 Sum_probs=51.3
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCC--CEEEEEEEECCCCCH----HHHHHHHCCCCEEEEEEE
Q ss_conf 98399999828786688999899736996322774214789--818999994788998----999998649882999999
Q 537021.9.peg.3 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST--EHAISFLCIDGSILN----SVLEKLSVNVTIRFVKQF 95 (100)
Q Consensus 22 ~~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g--~~A~~ii~vD~~i~~----~vl~~i~~~~~v~~vr~i 95 (100)
+...|++.-.|+||.+.++-+.|++++||+....- |-.++ +.-+-.+++++.+.+ ++|++|++.-. ++|.+
T Consensus 199 dKtsl~~~~~~~pGaL~~~L~~Fa~~~INLt~IeS-RP~~~~~~~Y~Ffid~eg~~~d~~v~~aL~~L~~~~~--~~kiL 275 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIES-RPSRKKAFEYLFYADFIGHREDQNVHNALENLREFAT--MVKVL 275 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEE-EECSSSTTEEEEEEEEESCTTSHHHHHHHHHHHTTCS--EEEEE
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEE-EECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCC--CEEEE
T ss_conf 54999999279985699999999987966678983-3578999628999996088698999999999998569--37999
No 23
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureus subsp. aureus MU50, structural genomics; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=96.43 E-value=0.017 Score=32.83 Aligned_cols=67 Identities=19% Similarity=0.184 Sum_probs=47.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCC--EEEEEEEECCCCCHHH---HHHHHCCCCEEEEEEE
Q ss_conf 99998287866889998997369963227742147898--1899999478899899---9998649882999999
Q 537021.9.peg.3 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCIDGSILNSV---LEKLSVNVTIRFVKQF 95 (100)
Q Consensus 26 L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~--~A~~ii~vD~~i~~~v---l~~i~~~~~v~~vr~i 95 (100)
+++.-.|+||.+.++-+.|+.+|||.-..+- |-.+++ .=+-.+++++...+++ +++|++. ..++|.+
T Consensus 192 ~~~~~~d~pGsL~~~L~~f~~~~INLtkIeS-RP~~~~~~~Y~Ffid~eg~~~~~~~~al~~L~~~--~~~vkvL 263 (267)
T 2qmw_A 192 LITPMHDKPGLLASVLNTFALFNINLSWIES-RPLKTQLGMYRFFVQADSAITTDIKKVIAILETL--DFKVEMI 263 (267)
T ss_dssp EEEESSCCTTHHHHHHHHHHTTTCCEEEEEE-EECSSSTTCEEEEEEESCCSCHHHHHHHHHHHHT--TEEEEEE
T ss_pred ECCCCCCCCCHHHHHHHHHHHCCCCEEEEEE-CCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH--CCCEEEE
T ss_conf 2024799876899999999988966689970-0068999748999997568988999999999984--5927998
No 24
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3- phenylpyruvate, PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=96.41 E-value=0.016 Score=33.08 Aligned_cols=64 Identities=13% Similarity=0.183 Sum_probs=47.9
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCC--EEEEEEEECCCCCH----HHHHHHHCCCC
Q ss_conf 3999998287866889998997369963227742147898--18999994788998----99999864988
Q 537021.9.peg.3 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCIDGSILN----SVLEKLSVNVT 88 (100)
Q Consensus 24 ~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~--~A~~ii~vD~~i~~----~vl~~i~~~~~ 88 (100)
.++++...|+||.+.++-+.|++++||.....- |-.+++ .=+-.+++++...+ ++|++|++.-.
T Consensus 209 ~~~~~~~~d~pGaL~~iL~~Fa~~~INLtkIeS-RP~~~~~~~Y~FfiD~eG~~~d~~v~~aL~~L~~~~~ 278 (329)
T 3luy_A 209 VLTLIPLVTGPGVLANLLDVFRDAGLNMTSFIS-RPIKGRTGTYSFIVTLDAAPWEERFRDALVEIAEHGD 278 (329)
T ss_dssp EEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEE-EEETTEEEEEEEEEEESSCTTSHHHHHHHHHHHHTTC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEC-CCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCC
T ss_conf 999998688861599999999987967688872-0078999608999998388798999999999998579
No 25
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=96.01 E-value=0.0092 Score=34.30 Aligned_cols=59 Identities=10% Similarity=0.193 Sum_probs=39.0
Q ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEE-EEEC--CCCCHHHHHHHH
Q ss_conf 99999828786688999899736996322774214789818999-9947--889989999986
Q 537021.9.peg.3 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCID--GSILNSVLEKLS 84 (100)
Q Consensus 25 ~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~i-i~vD--~~i~~~vl~~i~ 84 (100)
.+.+.-.|+||+++.++.+|++++.||..++..+-. |..++++ +.+. ..-.+.+.+.+.
T Consensus 14 lit~~G~DrpGiv~~l~~~l~~~~~ni~d~~~~~l~-g~f~l~ilv~~~~~~~~~~~l~~~L~ 75 (415)
T 3p96_A 14 LITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIR-HRLTLGVLVCCPADVADGPALRHDVE 75 (415)
T ss_dssp EEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEET-TEEEEEEEEEECHHHHTSHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEC-CEEEEEEEEEECCCCCCHHHHHHHHH
T ss_conf 999981898709999999999779988985538997-88889999981487444999999999
No 26
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=95.66 E-value=0.025 Score=32.00 Aligned_cols=61 Identities=16% Similarity=0.221 Sum_probs=44.1
Q ss_pred EEEEE-ECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCC--EEEEEEEECCCCCH----HHHHHHHCC
Q ss_conf 99999-8287866889998997369963227742147898--18999994788998----999998649
Q 537021.9.peg.3 25 MICIV-NADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCIDGSILN----SVLEKLSVN 86 (100)
Q Consensus 25 ~L~i~-~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~--~A~~ii~vD~~i~~----~vl~~i~~~ 86 (100)
++++. -.|+||.+.++-+.|+.++||+....- |-.+++ .=+-.+++++...+ ++|++|++.
T Consensus 203 s~~~~~~~d~pGsL~~iL~~Fa~~~INLtkIeS-RP~~~~~~~Y~F~iD~eg~~~d~~~~~aL~~L~~~ 270 (313)
T 3mwb_A 203 TVVVPLPEDHPGALMEILDQFASRGVNLSRIES-RPTGQYLGHYFFSIDADGHATDSRVADALAGLHRI 270 (313)
T ss_dssp EEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEE-EECSSSTTSEEEEEEEESCTTSHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEC-CCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 689985799865899999999986998277872-10699986199999985687999999999999986
No 27
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=94.87 E-value=0.1 Score=28.77 Aligned_cols=76 Identities=9% Similarity=0.003 Sum_probs=42.5
Q ss_pred EEEEEECCEEEEEECCCCEEEEEECC-CCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEE--CCCCCHHHHHHH
Q ss_conf 78999799899765798399999828-786688999899736996322774214789818999994--788998999998
Q 537021.9.peg.3 7 PRFIKIQEINFDVDIGRLMICIVNAD-ILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKL 83 (100)
Q Consensus 7 ~riv~i~g~~v~~~~~~~~L~i~~~D-~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~v--D~~i~~~vl~~i 83 (100)
+.+...+.......+..+.+.+...| +||.+..++..|+++++||..++- .+........+.+ ...-++.+...|
T Consensus 85 v~~~~~~~~~~~~~~~~~~v~v~g~~~~pgiv~~vt~~la~~~~ni~~i~r--~~~~~~~~ve~~~s~~~~~~~~l~~al 162 (415)
T 3p96_A 85 VSIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRG--VSDYPVIGLELRVSVPPGADEALRTAL 162 (415)
T ss_dssp EEEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEE--EESSSSEEEEEEEECCTTCHHHHHHHH
T ss_pred EEEEECCCCHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCEEEEEECCCCCCHHHHHHHH
T ss_conf 799844642210467607999975889869999999999965975323324--567865149998348878989999999
Q ss_pred H
Q ss_conf 6
Q 537021.9.peg.3 84 S 84 (100)
Q Consensus 84 ~ 84 (100)
.
T Consensus 163 ~ 163 (415)
T 3p96_A 163 N 163 (415)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 28
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=92.06 E-value=0.37 Score=25.82 Aligned_cols=66 Identities=17% Similarity=0.027 Sum_probs=39.5
Q ss_pred CCCEEEEEE-CCCCCHHHHHHHHHHHCCCCEEEEEEECCC-CCCEEEEEEEECCCCCHHHHHHHHCCC
Q ss_conf 983999998-287866889998997369963227742147-898189999947889989999986498
Q 537021.9.peg.3 22 GRLMICIVN-ADILGIVVFVGNILGEYGINIAHFHLGRSQ-STEHAISFLCIDGSILNSVLEKLSVNV 87 (100)
Q Consensus 22 ~~~~L~i~~-~D~PG~I~~v~~~L~~~~INIa~m~l~r~~-~g~~A~~ii~vD~~i~~~vl~~i~~~~ 87 (100)
+..++.+.+ .|+||+++++-+.|++++||+.-+.-+... ...........+..-.+..++.+..+.
T Consensus 14 ~~a~iti~~l~~~~g~~a~iF~~la~~~I~vdmI~q~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (178)
T 2dtj_A 14 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRSDGRRAMEILKKLQ 81 (178)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHHHHHHHHHHHHTTT
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHH
T ss_conf 98999991589985289999999997387579997246545675059999614888999998542012
No 29
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, PSI-2, protein structure initiative; 2.75A {Neisseria meningitidis MC58}
Probab=91.12 E-value=0.24 Score=26.80 Aligned_cols=57 Identities=12% Similarity=0.047 Sum_probs=37.2
Q ss_pred ECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHCCC
Q ss_conf 8287866889998997369963227742147898189999947889989999986498
Q 537021.9.peg.3 30 NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87 (100)
Q Consensus 30 ~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i~~~vl~~i~~~~ 87 (100)
-.+.||+++++-+.|+++|||+.-+.-+... .+.....+.+...-...+.+.+.++.
T Consensus 33 ~~~~~g~~~~iF~~la~~gI~vdmI~q~~~~-~~~~~isf~~~~~d~~~~~~~~~~~~ 89 (167)
T 2re1_A 33 VPDKPGVAYQILGAVADANIEVDMIIQNVGS-EGTTDFSFTVPRGDYKQTLEILSERQ 89 (167)
T ss_dssp EECCTTHHHHHHHHHHTTTCCCCCEEEC-----CEEEEEEEECGGGHHHHHHHHHHSS
T ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEEEECCC-CCEEEEEEEEEHHHHHHHHHHHHHHH
T ss_conf 8998318999999999849987999840478-97689999841888777999998655
No 30
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=85.97 E-value=1.1 Score=23.29 Aligned_cols=27 Identities=11% Similarity=0.043 Sum_probs=15.5
Q ss_pred ECCCCCHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 828786688999899736996322774
Q 537021.9.peg.3 30 NADILGIVVFVGNILGEYGINIAHFHL 56 (100)
Q Consensus 30 ~~D~PG~I~~v~~~L~~~~INIa~m~l 56 (100)
-.++||+.+++-+.|++++|||..+..
T Consensus 278 m~~~~G~~a~if~~l~~~~IsVd~i~q 304 (600)
T 3l76_A 278 VPDRPGVASKLFRDIAQQQVDIDLIIQ 304 (600)
T ss_dssp EECSTTHHHHHHHHHHHTTCCCCCEEB
T ss_pred CCCCCCHHHHHHHHHHHCCCEEEEEEE
T ss_conf 899875078886778862830899996
No 31
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2, protein structure initiative; 2.31A {Porphyromonas gingivalis}
Probab=85.57 E-value=1.7 Score=22.36 Aligned_cols=55 Identities=11% Similarity=-0.010 Sum_probs=40.5
Q ss_pred CCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEE
Q ss_conf 287866889998997369963227742147898189999947889989999986498829
Q 537021.9.peg.3 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90 (100)
Q Consensus 31 ~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i~~~vl~~i~~~~~v~ 90 (100)
.+.||+++++-+.|++++||+..+.. +. ..+++.--+......++++++....+.
T Consensus 29 ~~~~g~~~~if~~l~~~~I~vd~i~~---s~--~~i~i~~~~~~~~~~~~~~l~~~~~v~ 83 (157)
T 3mah_A 29 LLSWHFMRKLFEIFEFYQEPVDMVAT---SE--VGVSLTIDNDKNLPDIVRALSDIGDVT 83 (157)
T ss_dssp SCHHHHHHHHHHHHHHTTCCCSCEEC---CS--SEEEEEESCCTTHHHHHHHHTTTEEEE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEC---CC--CEEEEEECCHHHHHHHHHHHHCCCCEE
T ss_conf 88443999999999981998899965---87--779999365899999999972778379
No 32
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=84.80 E-value=2.1 Score=21.85 Aligned_cols=63 Identities=17% Similarity=0.230 Sum_probs=42.8
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCC-CEEEEEEEECCCCC---HHHHHHHHC
Q ss_conf 8399999828786688999899736996322774214789-81899999478899---899999864
Q 537021.9.peg.3 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST-EHAISFLCIDGSIL---NSVLEKLSV 85 (100)
Q Consensus 23 ~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g-~~A~~ii~vD~~i~---~~vl~~i~~ 85 (100)
...|++.=+|++|.++++..++.+++||+......-.++. +..-..++++..-. .++++.+++
T Consensus 34 ktSiiFSLkd~vGsLaraLkvFe~~~INLtHIESRPSk~~~~~yeffVd~E~~~~~~l~~li~~Lk~ 100 (429)
T 1phz_A 34 AISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLDKRTKPVLGSIIKSLRN 100 (429)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECBCGGGHHHHHHHHHHHHH
T ss_pred EEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 0899999687615899999999986936999636888788886269999826784789999999998
No 33
>1vr9_A CBS domain protein/ACT domain protein; TM0892, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=84.13 E-value=0.16 Score=27.71 Aligned_cols=63 Identities=16% Similarity=0.113 Sum_probs=49.2
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHC
Q ss_conf 9839999982878668899989973699632277421478981899999478899899999864
Q 537021.9.peg.3 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85 (100)
Q Consensus 22 ~~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i~~~vl~~i~~ 85 (100)
.|.++.+.-.|+||.++.++.++.++++||.++.......+ ..-..+.++..-...+.+.+++
T Consensus 137 ~g~~l~~~~~~~~~~l~~i~~~i~~~~~~i~s~~~~~~~~~-~~~i~irv~~~~~~~i~~~le~ 199 (213)
T 1vr9_A 137 PGIRFSVLLEDKPGELRKVVDALALSNINILSVITTRSGDG-KREVLIKVDAVDEGTLIKLFES 199 (213)
T ss_dssp ----------------------------------------------------------------
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEEECCCC-EEEEEEEECCCCHHHHHHHHHH
T ss_conf 97189998279998899999999976981999998715897-6999999826899999999998
No 34
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=82.94 E-value=2.5 Score=21.42 Aligned_cols=28 Identities=32% Similarity=0.305 Sum_probs=24.6
Q ss_pred ECCCCCHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 8287866889998997369963227742
Q 537021.9.peg.3 30 NADILGIVVFVGNILGEYGINIAHFHLG 57 (100)
Q Consensus 30 ~~D~PG~I~~v~~~L~~~~INIa~m~l~ 57 (100)
-.|.||+++++-++|++++|||.-+.-+
T Consensus 24 ~~~~~g~~a~iF~~la~~~I~VdmI~q~ 51 (167)
T 2dt9_A 24 IPDQPGIAAKVFQALAERGIAVDMIIQG 51 (167)
T ss_dssp EECSTTHHHHHHHHHHHHTCCCSCEEBC
T ss_pred CCCCCCHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 8999767999999999829880478712
No 35
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=73.78 E-value=3.5 Score=20.71 Aligned_cols=60 Identities=12% Similarity=0.048 Sum_probs=40.0
Q ss_pred CCCHHHHHHHHHHH-CCCCEEEEEEECCCCCCEEEEEEEECC-CCCHHHHHHHHCCCCEEEEEEEE
Q ss_conf 78668899989973-699632277421478981899999478-89989999986498829999999
Q 537021.9.peg.3 33 ILGIVVFVGNILGE-YGINIAHFHLGRSQSTEHAISFLCIDG-SILNSVLEKLSVNVTIRFVKQFE 96 (100)
Q Consensus 33 ~PG~I~~v~~~L~~-~~INIa~m~l~r~~~g~~A~~ii~vD~-~i~~~vl~~i~~~~~v~~vr~i~ 96 (100)
+|+-+..|...|.+ .|+-|.. .....|..+.+++-++ .-.-+.+++|+++|||.++..+-
T Consensus 15 ~Pe~~~~V~~~l~~~~g~EIh~----~d~~~GKiVVtiE~~~~~~~~~~i~~I~~l~GVlsa~lVY 76 (95)
T 2jsx_A 15 KSERISDISTQLNAFPGCEVAV----SDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVY 76 (95)
T ss_dssp CTTSHHHHHHHHTTSTTEEEEE----EETTTTEEEEEEEESSHHHHHHHHHHHTTSTTEEEEEESS
T ss_pred CHHHHHHHHHHHHCCCCCEEEE----ECCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 8788999999997599978962----0388970999997398679999999987699832786778
No 36
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal phosphate, isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=69.46 E-value=5.2 Score=19.80 Aligned_cols=61 Identities=16% Similarity=0.266 Sum_probs=37.7
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCC----CHHHHHHHHCC
Q ss_conf 83999998287866889998997369963227742147898189999947889----98999998649
Q 537021.9.peg.3 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI----LNSVLEKLSVN 86 (100)
Q Consensus 23 ~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i----~~~vl~~i~~~ 86 (100)
...+.+.-.|+||.+.++.++++.. ||..++. |......|...+.+.-.- -+++++.|++-
T Consensus 338 ~~~~~v~~~~~pG~l~~~~~~i~~~--~i~~~~~-~~~~~~~~~~~~~v~~t~~~~~~~~i~~~l~~~ 402 (514)
T 1tdj_A 338 EALLAVTIPEEKGSFLKFCQLLGGR--SVTEFNY-RFADAKNACIFVGVRLSRGLEERKEILQMLNDG 402 (514)
T ss_dssp EEEEEEECCBSSSCSHHHHHTTSSS--EEEEEEE-ECCCSSBCEEEEEEECSSTHHHHHHHHHHHTSS
T ss_pred EEEEEEEECCCCCHHHHHHHHHCCC--CEEEEEE-EECCCCCCCEEEEEEEECCHHHHHHHHHHHHHC
T ss_conf 4899997088998499999984778--6068888-721665572489999945756699999999967
No 37
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protein, nucleotide-binding, transcription regulation, activator, repressor; HET: PG4; 2.30A {Escherichia coli}
Probab=69.10 E-value=6.5 Score=19.28 Aligned_cols=69 Identities=13% Similarity=0.173 Sum_probs=46.9
Q ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEEEEEE
Q ss_conf 99999828786688999899736996322774214789818999994788998999998649882999999
Q 537021.9.peg.3 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95 (100)
Q Consensus 25 ~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i~~~vl~~i~~~~~v~~vr~i 95 (100)
+|-+...|+.|+...+...|+.+++++..+.... .+.....+-..+..-...+...+..+.++...+..
T Consensus 2 rl~v~~~DR~gl~~eil~~l~~~~i~i~~iei~~--~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~ 70 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDP--IGRIYLNFAELEFESFSSLMAEIRRIAGVTDVRTV 70 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEET--TTEEEEEECCCCHHHHHHHHHHHHHSTTEEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEC--CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0799826411679999999986687379999964--64299996234656789999999986516766544
No 38
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT domain, amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=62.86 E-value=8.1 Score=18.76 Aligned_cols=50 Identities=22% Similarity=0.339 Sum_probs=28.9
Q ss_pred CCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHH
Q ss_conf 287866889998997369963227742147898189999947889989999986
Q 537021.9.peg.3 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84 (100)
Q Consensus 31 ~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i~~~vl~~i~ 84 (100)
.+.||+++++-+.|+++++||..+..+- ....+.+ .++..-.+.+++.|+
T Consensus 329 ~~~~g~~~~if~~l~~~~i~V~~i~~~s---s~~si~~-~v~~~d~~~a~~~L~ 378 (473)
T 3c1m_A 329 VGVSGTAARIFKALGEEEVNVILISQGS---SETNISL-VVSEEDVDKALKALK 378 (473)
T ss_dssp SCHHHHHHHHHHHHHHTTCCEEEEEECC---TTCCEEE-EEEGGGHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCCEEEEEEECC---CCCCEEE-ECCHHHHHHHHHHHH
T ss_conf 7765679999999985697599998558---8774001-056889999999999
No 39
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=58.88 E-value=10 Score=18.21 Aligned_cols=57 Identities=21% Similarity=0.046 Sum_probs=34.3
Q ss_pred ECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCC-CEEEEEEEECCCCCH---HHHHHHHCC
Q ss_conf 828786688999899736996322774214789-818999994788998---999998649
Q 537021.9.peg.3 30 NADILGIVVFVGNILGEYGINIAHFHLGRSQST-EHAISFLCIDGSILN---SVLEKLSVN 86 (100)
Q Consensus 30 ~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g-~~A~~ii~vD~~i~~---~vl~~i~~~ 86 (100)
-.+.||+++++-+.|++++||+..+..+..... ........++....+ +.+++++..
T Consensus 272 ~~~~~g~~~~if~~l~~~~i~v~~i~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 332 (421)
T 3ab4_A 272 ISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRSDGRRAMEILKKLQVQ 332 (421)
T ss_dssp EESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETTTHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHH
T ss_conf 8898456999999999759986898503554556423477740177799999999999863
No 40
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, allostery, S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=58.03 E-value=6.2 Score=19.39 Aligned_cols=27 Identities=22% Similarity=0.293 Sum_probs=23.8
Q ss_pred CCCCCHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 287866889998997369963227742
Q 537021.9.peg.3 31 ADILGIVVFVGNILGEYGINIAHFHLG 57 (100)
Q Consensus 31 ~D~PG~I~~v~~~L~~~~INIa~m~l~ 57 (100)
.+.||+++++-+.|++++||+..+..+
T Consensus 352 ~~~~g~~~~if~~l~~~~I~V~~i~~s 378 (510)
T 2cdq_A 352 LGQVGFLAKVFSIFEELGISVDVVATS 378 (510)
T ss_dssp TTCTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHCCEEEEEECCC
T ss_conf 787458888646876447558874056
No 41
>1v6t_A Hypothetical UPF0271 protein PH0986; TIM-barrel, lactam utilization protein, structural genomics; 1.70A {Pyrococcus horikoshii OT3} SCOP: c.6.2.5
Probab=56.77 E-value=5.2 Score=19.79 Aligned_cols=45 Identities=22% Similarity=0.361 Sum_probs=35.6
Q ss_pred EEEEEECCEEEEEECCCCEEEEEECCCCCHHHH---HHHHHHHCCCCEEEE
Q ss_conf 789997998997657983999998287866889---998997369963227
Q 537021.9.peg.3 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVF---VGNILGEYGINIAHF 54 (100)
Q Consensus 7 ~riv~i~g~~v~~~~~~~~L~i~~~D~PG~I~~---v~~~L~~~~INIa~m 54 (100)
-++..++|-.+.+..+ +|++ |-|.|+.+.. +-..|.++||-|..+
T Consensus 203 g~V~ti~G~~I~i~ad--TICv-HgDtp~Av~~a~~ir~~L~~~gi~I~pl 250 (255)
T 1v6t_A 203 GGIRAINGEWVDLKVD--TICV-HGDNPKAVEITSYIRKVLEEEGVKIVPM 250 (255)
T ss_dssp SEEECTTSCEEECCCS--EEEC-CCSSHHHHHHHHHHHHHHHHTTCEECCG
T ss_pred CCEEECCCCEEECCCC--EEEE-CCCCHHHHHHHHHHHHHHHHCCCEEECH
T ss_conf 9889148988751689--8998-9998789999999999999889999737
No 42
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=52.19 E-value=10 Score=18.23 Aligned_cols=56 Identities=20% Similarity=0.199 Sum_probs=38.0
Q ss_pred CCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEE-------CCCCCHHHHHHHHCCCCEE
Q ss_conf 28786688999899736996322774214789818999994-------7889989999986498829
Q 537021.9.peg.3 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-------DGSILNSVLEKLSVNVTIR 90 (100)
Q Consensus 31 ~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~v-------D~~i~~~vl~~i~~~~~v~ 90 (100)
.+.||+++++-+.|++++|||..+..+. ....+.+ +. |....++++++++....+.
T Consensus 319 ~~~~g~~~~i~~~l~~~~I~id~i~~s~---~~~~~~i-~~~~~~~~~~~~~~~~~~~~l~~~~~i~ 381 (449)
T 2j0w_A 319 LHSRGFLAEVFGILARHNISVDLITTSE---VSVALTL-DTTGSTSTGDTLLTQSLLMELSALCRVE 381 (449)
T ss_dssp SCHHHHHHHHTTTTTTTTCCCSEEEEET---TEEEEEE-CCCCCSSTTCCSSCHHHHHHHHHHSCEE
T ss_pred CCCCCHHHHHHHHHHHCCCCEEEEEECC---CCCCCCC-CCCCHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 7877669999899986598769998244---3133345-5420033677999999999723778489
No 43
>2dfa_A Hypothetical UPF0271 protein TTHB195; lactam utilization protein, structural genomics, NPPSFA; 1.90A {Thermus thermophilus HB8} SCOP: c.6.2.5
Probab=51.52 E-value=13 Score=17.72 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=33.8
Q ss_pred EEEEEECCEEEEEECCCCEEEEEECCCCCHHH---HHHHHHHHCCCCEEEE
Q ss_conf 78999799899765798399999828786688---9998997369963227
Q 537021.9.peg.3 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVV---FVGNILGEYGINIAHF 54 (100)
Q Consensus 7 ~riv~i~g~~v~~~~~~~~L~i~~~D~PG~I~---~v~~~L~~~~INIa~m 54 (100)
-++..++|-.+.+..+ +|++ |-|.|+.+. .+-..|.++||.|..+
T Consensus 203 g~V~t~~G~~i~i~ad--TiCv-HgDtp~Av~~a~~ir~~L~~~gi~I~~f 250 (250)
T 2dfa_A 203 GKVEALDGGEVAVRAD--TLCI-HGDNPNAPEVARAVREALEQAGVEVRAF 250 (250)
T ss_dssp SEEEBTTSSEEECCCS--EEEE-C---CCHHHHHHHHHHHHHTTTCEECCC
T ss_pred CCEEECCCCEEECCCC--EEEE-CCCCHHHHHHHHHHHHHHHHCCCEEECC
T ss_conf 9889168988743578--8998-9998789999999999999887978169
No 44
>2cvi_A 75AA long hypothetical regulatory protein ASNC; structural genomics, unknown function; 1.50A {Pyrococcus horikoshii OT3} PDB: 2z4p_A 2e1a_A
Probab=42.65 E-value=19 Score=16.77 Aligned_cols=59 Identities=14% Similarity=0.001 Sum_probs=32.4
Q ss_pred CCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEE-EEE-CCCCCHH-HHHHHHCCCCEEEEEE
Q ss_conf 8786688999899736996322774214789818999-994-7889989-9999864988299999
Q 537021.9.peg.3 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNS-VLEKLSVNVTIRFVKQ 94 (100)
Q Consensus 32 D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~i-i~v-D~~i~~~-vl~~i~~~~~v~~vr~ 94 (100)
=.||-...+...|++.. .|...+. - .|..-+++ +.+ |.+-=.+ +.+.|.++|||.+.+-
T Consensus 10 ~~~~~~~~v~~~l~~~p-eV~~v~~--v-tG~~Dli~~v~~~d~~~l~~~v~~~l~~~~gV~~t~T 71 (83)
T 2cvi_A 10 TAAGKEREVMEKLLAMP-EVKEAYV--V-YGEYDLIVKVETDTLKDLDQFITEKIRKMPEIQMTST 71 (83)
T ss_dssp ECTTCHHHHHHHHHTST-TEEEEEE--C-BSSCSEEEEEEESSHHHHHHHHHTTGGGCTTEEEEEE
T ss_pred ECCCCHHHHHHHHHCCC-CEEEEEE--E-ECCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 77899999999997799-9799999--2-3898899999989999999999998635999837999
No 45
>1xw8_A UPF0271 protein YBGL; NESG, northeast structural genomics consortium, structural genomics, protein structure initiative, PSI, X-RAY; 2.00A {Escherichia coli} SCOP: c.6.2.5
Probab=39.70 E-value=12 Score=17.90 Aligned_cols=46 Identities=20% Similarity=0.218 Sum_probs=34.9
Q ss_pred EEEEEECCEEEEEECCCCEEEEEECCCCCHHH---HHHHHHHHCCCCEEEEE
Q ss_conf 78999799899765798399999828786688---99989973699632277
Q 537021.9.peg.3 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVV---FVGNILGEYGINIAHFH 55 (100)
Q Consensus 7 ~riv~i~g~~v~~~~~~~~L~i~~~D~PG~I~---~v~~~L~~~~INIa~m~ 55 (100)
-++..++|-.+.+..+ +|++ |-|.|+.+. .+-+.|.++||-|..+.
T Consensus 198 g~V~ti~G~~i~i~ad--TICv-HgDtp~Av~~a~~ir~~L~~~gi~I~~~~ 246 (252)
T 1xw8_A 198 GRVKSITGEWATVAAQ--TVCL-HGDGEHALAFARRLRSAFAEKGIVVAALE 246 (252)
T ss_dssp SEEECTTSCEEECCCC--EEEC-CCCC-CCHHHHHHHHHHC----CCBCCCC
T ss_pred CCEECCCCCEECCCCC--EEEE-CCCCHHHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 9878678998017888--7998-99987899999999999998899897152
No 46
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein structure initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=37.96 E-value=23 Score=16.37 Aligned_cols=49 Identities=22% Similarity=0.101 Sum_probs=30.4
Q ss_pred CCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHCC
Q ss_conf 28786688999899736996322774214789818999994788998999998649
Q 537021.9.peg.3 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVN 86 (100)
Q Consensus 31 ~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i~~~vl~~i~~~ 86 (100)
-+..|+++.+++.|+++||-|-.+.... .=+..+..+ --++.++.|++.
T Consensus 73 ~~~vGila~is~~LA~agIsif~iSty~-----tD~ilV~~~--~~~~A~~~L~~~ 121 (134)
T 1zhv_A 73 FDETGIVLSVISPLSTNGIGIFVVSTFD-----GDHLLVRSN--DLEKTADLLANA 121 (134)
T ss_dssp CSSCCHHHHHHHHHHTTTCCCEEEECSS-----CEEEEEEGG--GHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEEEEEC-----CCEEEEEHH--HHHHHHHHHHHC
T ss_conf 0056569999899987799659987541-----747998878--999999999988
No 47
>2zbc_A 83AA long hypothetical transcriptional regulator ASNC; SARD; 1.90A {Sulfolobus tokodaii str}
Probab=35.49 E-value=25 Score=16.15 Aligned_cols=58 Identities=14% Similarity=-0.056 Sum_probs=31.3
Q ss_pred CCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCC--HH-HHHHHHCCCCEEEEEE
Q ss_conf 78668899989973699632277421478981899999478899--89-9999864988299999
Q 537021.9.peg.3 33 ILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NS-VLEKLSVNVTIRFVKQ 94 (100)
Q Consensus 33 ~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i~--~~-vl~~i~~~~~v~~vr~ 94 (100)
.||-.-.+...|.+. =.|...+ ...|..-+++.-.-...+ .+ +.++|.++|||.+.+.
T Consensus 11 ~~~~~~~v~~~l~~~-peV~~~~---~vtG~~D~~~~v~~~d~~~l~~~v~~~l~~~~gV~~t~T 71 (83)
T 2zbc_A 11 DAGGEDEVFERLKSM-SEVTEVH---VVYGVYDIVVKVEADSMDKLKDFVTNTIRKLPKVRSTLT 71 (83)
T ss_dssp STTCHHHHHHHHTTC-TTEEEEE---ECSSSCSEEEEEECSSHHHHHHHHHHTGGGSTTEEEEEE
T ss_pred CCCCHHHHHHHHHCC-CCEEEEE---ECCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 789999999999769-4734889---811899899999999999999999998606989927999
No 48
>2djw_A Probable transcriptional regulator, ASNC family; structural genomics, NPPSFA; 2.40A {Thermus thermophilus HB8}
Probab=33.74 E-value=27 Score=15.99 Aligned_cols=60 Identities=13% Similarity=0.068 Sum_probs=36.3
Q ss_pred CCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEE--CCCCCHHHH-HHHHCCCCEEEEEEE
Q ss_conf 8786688999899736996322774214789818999994--788998999-998649882999999
Q 537021.9.peg.3 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVL-EKLSVNVTIRFVKQF 95 (100)
Q Consensus 32 D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~v--D~~i~~~vl-~~i~~~~~v~~vr~i 95 (100)
=.|+-+..+...|++.. ++...+. ..|...+++.-. |.+-=++.+ ++|.++|||.+++..
T Consensus 10 v~~~~~~~v~~~l~~~p-eV~~~~~---vtG~~Dli~~v~~~d~~~l~~~l~~~i~~~~gV~~t~T~ 72 (92)
T 2djw_A 10 PRGNRVQALGEAIAELP-QVAEVYS---VTGPYDLVALVRLKDVEELDDVVTQGILSLEGVERTETL 72 (92)
T ss_dssp ECGGGHHHHHHHHTTST-TEEEEEE---ESSSSSEEEEEEESSGGGHHHHCCCCCTTSTTEEEEEEE
T ss_pred ECCCCHHHHHHHHHCCC-CEEEEEE---ECCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 78787999999997498-8856426---238888999999899999999999985159999469999
No 49
>1qlm_A Methenyltetrahydromethanopterin cyclohydrolase; methanogenesis, biological methanogenesis; 2.0A {Methanopyrus kandleri} SCOP: d.147.1.1
Probab=30.93 E-value=31 Score=15.73 Aligned_cols=30 Identities=17% Similarity=0.081 Sum_probs=24.8
Q ss_pred CCCCEEEEEEEECCCCCHHHHHHHHCCCCE
Q ss_conf 789818999994788998999998649882
Q 537021.9.peg.3 60 QSTEHAISFLCIDGSILNSVLEKLSVNVTI 89 (100)
Q Consensus 60 ~~g~~A~~ii~vD~~i~~~vl~~i~~~~~v 89 (100)
.+...|+.++|.|+.+|+++.++|.+--+|
T Consensus 130 D~~~~avlvlE~~~lP~~~v~~~iA~~cgv 159 (316)
T 1qlm_A 130 DDADVAILCLESSELPDEDVAEHVADECGV 159 (316)
T ss_dssp CCCSCEEEEEECSSCCCHHHHHHHHHHHTS
T ss_pred ECCCEEEEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 657708999976999899999999998199
No 50
>1lfp_A Hypothetical protein AQ_1575; NEW fold, thermostability, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 1.72A {Aquifex aeolicus} SCOP: e.39.1.1
Probab=30.64 E-value=31 Score=15.70 Aligned_cols=56 Identities=16% Similarity=0.097 Sum_probs=40.4
Q ss_pred CCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEC-CCCC---HHHHHHHHCCCCEEEEE
Q ss_conf 7866889998997369963227742147898189999947-8899---89999986498829999
Q 537021.9.peg.3 33 ILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID-GSIL---NSVLEKLSVNVTIRFVK 93 (100)
Q Consensus 33 ~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD-~~i~---~~vl~~i~~~~~v~~vr 93 (100)
.|--+..+...|-+.++.+....+..... ..++++ .+.. ..+++.|..+++|++|-
T Consensus 176 ~~~~~~~v~~~Le~~g~~i~~sei~~~P~-----~~v~l~dee~~~~~~kLid~Lee~dDVq~Vy 235 (249)
T 1lfp_A 176 VPEELYEVKENLEKLGVPIEKAQITWKPI-----STVQINDEETAQKVIKLLNALEELDDVQQVI 235 (249)
T ss_dssp CGGGHHHHHHHHHTTTCCCSEEEEEEEES-----SCEECCCHHHHHHHHHHHHHHHTSTTEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCCCCCEEEEEEC-----CCEECCCHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf 79999999999987487612020268507-----8342487999999999999874521701253
No 51
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=28.77 E-value=31 Score=15.69 Aligned_cols=48 Identities=17% Similarity=0.137 Sum_probs=29.8
Q ss_pred CCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHCC
Q ss_conf 8786688999899736996322774214789818999994788998999998649
Q 537021.9.peg.3 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVN 86 (100)
Q Consensus 32 D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~i~~~vl~~i~~~ 86 (100)
+..|+++.+++.|+++||-+-...-.. .+ +..+.. .--++.++.|+++
T Consensus 83 eaVGl~A~is~~La~~~is~~~vst~~---~D--hi~V~~--~~~~~A~~~L~~L 130 (133)
T 1zvp_A 83 EAVGLTAAFATKLAEHGISANVIAGYY---HD--HIFVQK--EKAQQALQALGEF 130 (133)
T ss_dssp CCSCHHHHHHHHHHHTTCCCEEEECSS---CE--EEEEEG--GGHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEEEEE---CC--EEEEEH--HHHHHHHHHHHHH
T ss_conf 124169999899987799759977330---64--799846--6899999999998
No 52
>2nzc_A Hypothetical protein; sturctural genomics, TM1266, structural genomics, PSI-2, protein structure initiative; 1.95A {Thermotoga maritima MSB8} SCOP: d.58.18.14
Probab=25.64 E-value=38 Score=15.21 Aligned_cols=65 Identities=20% Similarity=0.188 Sum_probs=44.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEE-EEEEECCCCCCEEEEEEEECCCCC--HHHHHHHHCCCCEEE
Q ss_conf 999982878668899989973699632-277421478981899999478899--899999864988299
Q 537021.9.peg.3 26 ICIVNADILGIVVFVGNILGEYGINIA-HFHLGRSQSTEHAISFLCIDGSIL--NSVLEKLSVNVTIRF 91 (100)
Q Consensus 26 L~i~~~D~PG~I~~v~~~L~~~~INIa-~m~l~r~~~g~~A~~ii~vD~~i~--~~vl~~i~~~~~v~~ 91 (100)
+-+.-+|+--...+|..+|.+++..|- .|-+.-..+ +.++..+.+|.+-+ .++-.+|.++|+|.-
T Consensus 10 igIivedr~~~a~kVneiL~~yg~~I~gRmGiP~~~~-~i~iIsl~v~g~~d~I~~LtgkLg~i~gV~v 77 (86)
T 2nzc_A 10 LTIVVEDREKAYRQVNELLHNFSEDILLRVGYPVREE-NMAIIFLVLKTDNDTIGALSGKLGQISGVRV 77 (86)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTGGGEEEEEEEEEGGG-TEEEEEEEEEECHHHHHHHHHHHHTSTTEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCC-CCEEEEEEEECCHHHHHHHHHHHCCCCCEEE
T ss_conf 9999968087689999999875787898646880547-9229999998888899998776379998899
No 53
>3kz5_E Protein SOPB; partition, segregation, F plasmid, DNA-binding protein, DNA- DNA binding protein; 1.58A {Escherichia coli}
Probab=24.56 E-value=31 Score=15.68 Aligned_cols=21 Identities=19% Similarity=0.286 Sum_probs=18.0
Q ss_pred EEEEEEC-CCCCHHHHHHHHCC
Q ss_conf 9999947-88998999998649
Q 537021.9.peg.3 66 ISFLCID-GSILNSVLEKLSVN 86 (100)
Q Consensus 66 ~~ii~vD-~~i~~~vl~~i~~~ 86 (100)
-|++++| +.+|.+.+|++.++
T Consensus 22 K~VlnLDrsr~p~~Cie~ieai 43 (52)
T 3kz5_E 22 KMVLNLDRSRVPTECIEKIEAI 43 (52)
T ss_dssp EEEEEEETTTSCHHHHHHHHHH
T ss_pred EEEEECCCCCCCHHHHHHHHHH
T ss_conf 6899623111868999999999
No 54
>2bj7_A Nickel responsive regulator; transcription, repressor, NIKR, DNA- binding, metal-binding, transcription regulation; HET: PG4; 2.1A {Pyrococcus horikoshii} SCOP: a.43.1.3 d.58.18.4 PDB: 2bj1_A 2bj3_A* 2bj8_A* 2bj9_A*
Probab=24.38 E-value=41 Score=15.08 Aligned_cols=74 Identities=15% Similarity=0.170 Sum_probs=53.7
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHCCCCE-EEEEEECCCCCCEEEEEEEECCCCC--HHHHHHHHCCCCEEEEEEEEE
Q ss_conf 983999998287866889998997369963-2277421478981899999478899--899999864988299999997
Q 537021.9.peg.3 22 GRLMICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFLCIDGSIL--NSVLEKLSVNVTIRFVKQFEF 97 (100)
Q Consensus 22 ~~~~L~i~~~D~PG~I~~v~~~L~~~~INI-a~m~l~r~~~g~~A~~ii~vD~~i~--~~vl~~i~~~~~v~~vr~i~~ 97 (100)
.|...++.+..+.+...+++.+--++.-.| +++++.- ..+..+-++-+.++.. .++.++|.++.||..+++.-.
T Consensus 55 ~G~i~vvydh~~~~l~~~L~~iqH~~~~~I~ss~Hvhl--~~~~ClEvi~v~G~~~~I~~l~~~l~~~kGV~~~~l~~~ 131 (138)
T 2bj7_A 55 AGTITIVYNHDEGDVVKALLDLQHEYLDEIISSLHVHM--DEHNCLEVIVVKGEAKKIKMIADKLLSLKGVKHGKLVMT 131 (138)
T ss_dssp EEEEEEEEETTSTTHHHHHHHHHHHTTTTEEEEEEEEC--SSSEEEEEEEEEEEHHHHHHHHHHHHTSTTEEEEEEEEE
T ss_pred EEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEEC--CCCEEEEEEEEEECHHHHHHHHHHHHCCCCEEEEEEEEC
T ss_conf 89999999677322878999987743063999988732--699039999999559999999999865589048999982
No 55
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=23.42 E-value=42 Score=14.97 Aligned_cols=61 Identities=10% Similarity=0.012 Sum_probs=38.4
Q ss_pred HHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEE--C-CCCCHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 88999899736996322774214789818999994--7-88998999998649882999999974
Q 537021.9.peg.3 37 VVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--D-GSILNSVLEKLSVNVTIRFVKQFEFN 98 (100)
Q Consensus 37 I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~v--D-~~i~~~vl~~i~~~~~v~~vr~i~~~ 98 (100)
-..|-+++- .|..+.....---.-|=.++.+..+ | .--.+++-+.|+++++|.++-..+++
T Consensus 23 ~~~Ik~~~~-~g~~~~~~~~ePiaFGLk~L~v~~vv~D~~g~~D~lee~i~~ie~V~svev~~~~ 86 (89)
T 1gh8_A 23 KKEIQERIP-EGTELHKIDEEPIAFGLVALNVMVVVGDAEGGTEAAEESLSGIEGVSNIEVTDVR 86 (89)
T ss_dssp HHHHHHHSC-TTSEECCCCEEECSSSCEEEEEEEEESSSCGGGGHHHHHHTTSCSSEEEEEEEEE
T ss_pred HHHHHHHCC-CCCEEEEEEEEEEECCEEEEEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEEE
T ss_conf 999997564-8745745799877736264999999984885768999998555997589989767
No 56
>3cjs_B 50S ribosomal protein L11, ribosomal protein L11 methyltransferase; S-adenosyl-L-methionine dependent methyltransferase; 1.37A {Thermus thermophilus} SCOP: d.47.1.1 PDB: 3cju_B* 2bcw_A
Probab=22.32 E-value=26 Score=16.10 Aligned_cols=17 Identities=47% Similarity=0.649 Sum_probs=14.4
Q ss_pred HHHHHHHHHCCCCEEEE
Q ss_conf 89998997369963227
Q 537021.9.peg.3 38 VFVGNILGEYGINIAHF 54 (100)
Q Consensus 38 ~~v~~~L~~~~INIa~m 54 (100)
-.+|..||.+||||..+
T Consensus 21 PPvGpaLGq~GiNi~~F 37 (72)
T 3cjs_B 21 PPVGPALGQHGANIMEF 37 (72)
T ss_dssp TTHHHHHHTTTCCHHHH
T ss_pred CCCCCCCCCCCCCHHHH
T ss_conf 99775101258788999
Done!