HHSEARCH alignment of GI: peg_33 and SCOP domain: d1u8sa1

Alignment
>d1u8sa1 d.58.18.5 (A:2-87) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]}
Probab=97.70  E-value=1.6e-05  Score=47.55  Aligned_cols=50  Identities=26%  Similarity=0.287  Sum_probs=38.5

Q ss_pred             CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCC
Q ss_conf             8399999828786688999899736996322774214789818999994788
Q 537021.9.peg.3   23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS   74 (100)
Q Consensus        23 ~~~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~g~~A~~ii~vD~~   74 (100)
                      ...+.+.-.|+||+++.+++.|+++|+||...+..+.  ++...+++.++.+
T Consensus         5 ~~vitv~G~DrpGiva~vt~~l~~~g~NI~d~~~~~~--~~~~~~~~~v~~~   54 (86)
T d1u8sa1           5 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMF--GKEFTLLMLISGS   54 (86)
T ss_dssp             EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEEC
T ss_pred             EEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEEEE--CCEEEEEEEEECC
T ss_conf             8999999389871999999999987976999674997--8915999999868


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: Glycine cleavage system transcriptional repressor
domain: putative transcriptional repressor VC2159
species: Vibrio cholerae [TaxId: 666]