HHSEARCH alignment of GI: peg_33 and SCOP domain: d1u8sa2

Alignment

Probab=97.61  E-value=0.00018  Score=42.06  Aligned_cols=62  Identities=11%  Similarity=0.120  Sum_probs=39.9

Q ss_pred             EEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCC------CCEEEEEEEE--CCCCC-HHHHHHHHCC
Q ss_conf             9999982878668899989973699632277421478------9818999994--78899-8999998649
Q 537021.9.peg.3   25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS------TEHAISFLCI--DGSIL-NSVLEKLSVN   86 (100)
Q Consensus        25 ~L~i~~~D~PG~I~~v~~~L~~~~INIa~m~l~r~~~------g~~A~~ii~v--D~~i~-~~vl~~i~~~   86 (100)
                      .+.+.-.|+||+++.|+++|+++++||..++......      .....|-+.+  ....+ +++.+++.++
T Consensus         8 ~v~v~g~DrpGIV~~it~~la~~~~nI~~l~t~~~~a~~~~~~~~~f~~~~~~~~p~~~~~~~l~~~l~~l   78 (93)
T d1u8sa2           8 EVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDSGCNLMQLQEEFDAL   78 (93)
T ss_dssp             EEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECTTSCHHHHHHHHHHH
T ss_pred             EEEEEECCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
T ss_conf             99999799899899999999986998053321232456786667658999999758643589999999999

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: Glycine cleavage system transcriptional repressor
domain: putative transcriptional repressor VC2159
species: Vibrio cholerae [TaxId: 666]