BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= 537021.9.peg.33_1
(100 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
>gi|325063120|gb|ADY66810.1| D-3-phosphoglycerate dehydrogenase [Agrobacterium sp. H13-3]
Length = 531
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 51/100 (51%), Positives = 67/100 (67%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G MI I N D+ G++ F+G LGE G+NIA+F LGR +
Sbjct: 432 VFSDGKPRFIQIKNINMDADVGSHMIYITNTDVPGMIGFMGTTLGEAGVNIANFQLGREK 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + VL+KL N IR V+ FN+D
Sbjct: 492 EGGDAIALLYVDGPVSEDVLDKLRANPAIRQVRPLTFNID 531
>gi|227823299|ref|YP_002827271.1| D-3-phosphoglycerate dehydrogenase [Sinorhizobium fredii NGR234]
gi|227342300|gb|ACP26518.1| phosphoglycerate dehydrogenase [Sinorhizobium fredii NGR234]
Length = 531
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/100 (47%), Positives = 66/100 (66%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G M+ + N D+ G++ F+G LG+ +NIA+F LGR +
Sbjct: 432 VFSDGKPRFIQIKGINLDADVGNHMVYLTNTDVPGMIGFIGTTLGDANVNIANFQLGREK 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + +VL+KL N +R K FNVD
Sbjct: 492 QGGDAIALLYVDGPVSEAVLDKLRANPAVRQAKPLVFNVD 531
>gi|15891242|ref|NP_356914.1| D-3-phosphoglycerate dehydrogenase [Agrobacterium tumefaciens str.
C58]
gi|15159607|gb|AAK89699.1| D-3-phosphoglycerate dehydrogenase [Agrobacterium tumefaciens str.
C58]
Length = 531
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 53/100 (53%), Positives = 67/100 (67%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G MI I N D+ G++ F+G LGE G+NIA+F LGR +
Sbjct: 432 VFSDGKPRFIQIKNINMDADVGSHMIYITNTDVPGMIGFMGTTLGEAGVNIANFQLGREK 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + VL+KL N IR VK FNVD
Sbjct: 492 EAGDAIALLYVDGPVSEEVLDKLRANSAIRQVKPLTFNVD 531
>gi|328542552|ref|YP_004302661.1| Aspartyl/glutamyl tRNA amidotransferase subunit C [Polymorphum
gilvum SL003B-26A1]
gi|326412298|gb|ADZ69361.1| Aspartyl/glutamyl tRNA amidotransferase subunit C [Polymorphum
gilvum SL003B-26A1]
Length = 528
Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 62/97 (63%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DGKPR I+++ IN + ++G M+ I N D G + G +LG+ G+NIA F+LGR++
Sbjct: 432 VFADGKPRIIQVKGINMEAELGPHMLYITNEDKPGFIGKFGTLLGQAGVNIATFNLGRTE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ AI+ + +DG + LE+++ ++ VK +F
Sbjct: 492 AGGDAIALIEVDGDVPARTLEQINALPLVKQVKLLKF 528
>gi|307318345|ref|ZP_07597780.1| D-3-phosphoglycerate dehydrogenase [Sinorhizobium meliloti AK83]
gi|306896027|gb|EFN26778.1| D-3-phosphoglycerate dehydrogenase [Sinorhizobium meliloti AK83]
Length = 531
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 49/100 (49%), Positives = 67/100 (67%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G M+ I N D+ G++ F+G+ LG+ G+NIA+F LGR +
Sbjct: 432 VFSDGKPRFIQIKGINLDADVGNHMVYITNTDVPGMIGFIGSTLGDAGVNIANFQLGREK 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + VL+KL N IR K FN+D
Sbjct: 492 QGGDAIALLYVDGPVSEIVLDKLRANEAIRQAKPLVFNID 531
>gi|307300480|ref|ZP_07580260.1| D-3-phosphoglycerate dehydrogenase [Sinorhizobium meliloti BL225C]
gi|306904646|gb|EFN35230.1| D-3-phosphoglycerate dehydrogenase [Sinorhizobium meliloti BL225C]
Length = 531
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 49/100 (49%), Positives = 67/100 (67%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G M+ I N D+ G++ F+G+ LG+ G+NIA+F LGR +
Sbjct: 432 VFSDGKPRFIQIKGINLDADVGNHMVYITNTDVPGMIGFIGSTLGDAGVNIANFQLGREK 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + VL+KL N IR K FN+D
Sbjct: 492 QGGDAIALLYVDGPVSEIVLDKLRANEAIRQAKPLVFNID 531
>gi|15966483|ref|NP_386836.1| D-3-phosphoglycerate dehydrogenase [Sinorhizobium meliloti 1021]
gi|15075754|emb|CAC47309.1| Putative D-3-phosphoglycerate dehydrogenase [Sinorhizobium meliloti
1021]
Length = 531
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 49/100 (49%), Positives = 67/100 (67%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G M+ I N D+ G++ F+G+ LG+ G+NIA+F LGR +
Sbjct: 432 VFSDGKPRFIQIKGINLDADVGNHMVYITNTDVPGMIGFIGSTLGDAGVNIANFQLGREK 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + VL+KL N IR K FN+D
Sbjct: 492 QGGDAIALLYVDGPVSEIVLDKLRANEAIRQAKPLVFNID 531
>gi|150397816|ref|YP_001328283.1| D-3-phosphoglycerate dehydrogenase [Sinorhizobium medicae WSM419]
gi|150029331|gb|ABR61448.1| D-3-phosphoglycerate dehydrogenase [Sinorhizobium medicae WSM419]
Length = 531
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 47/100 (47%), Positives = 68/100 (68%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G M+ + N D+ G++ F+G+ LG+ G+NIA+F LGR +
Sbjct: 432 VFSDGKPRFIQIKGINLDADVGAHMVYLTNTDVPGMIGFIGSTLGDAGVNIANFQLGREK 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + +VL++L N IR K FN+D
Sbjct: 492 QGGDAIALLYVDGPVSETVLDRLRANEAIRQAKPLVFNID 531
>gi|307944592|ref|ZP_07659932.1| phosphoglycerate dehydrogenase [Roseibium sp. TrichSKD4]
gi|307772341|gb|EFO31562.1| phosphoglycerate dehydrogenase [Roseibium sp. TrichSKD4]
Length = 528
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 58/97 (59%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG+PR I+++ IN + + M+ I N D G + +G LG G+NIA F+LGR+
Sbjct: 432 VFADGRPRIIQVKGINMEAGLSEHMLYITNEDKPGFIGQLGMELGSNGVNIASFNLGRTA 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
E AI + +DG + S++ +LS ++ VK +F
Sbjct: 492 PGEDAICLIEVDGEVPASIMARLSAVPHVKQVKALQF 528
>gi|148261633|ref|YP_001235760.1| D-3-phosphoglycerate dehydrogenase [Acidiphilium cryptum JF-5]
gi|326405123|ref|YP_004285205.1| D-3-phosphoglycerate dehydrogenase [Acidiphilium multivorum AIU301]
gi|146403314|gb|ABQ31841.1| D-3-phosphoglycerate dehydrogenase [Acidiphilium cryptum JF-5]
gi|325051985|dbj|BAJ82323.1| D-3-phosphoglycerate dehydrogenase [Acidiphilium multivorum AIU301]
Length = 528
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 49/97 (50%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F KPR ++++ I + D GR M+ + N D G + IL E GINIA FHLGR++
Sbjct: 432 LFGGAKPRLVEVKGIKVEADFGRHMLYVTNRDKPGFIAQCSAILAEKGINIATFHLGRTE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ + ID ++ + L + + Q F
Sbjct: 492 KGGDAVCLISIDETLPDDALAAIRALPQVMQATQISF 528
>gi|116253700|ref|YP_769538.1| D-3-phosphoglycerate dehydrogenase [Rhizobium leguminosarum bv.
viciae 3841]
gi|115258348|emb|CAK09450.1| putative D-3-phosphoglycerate dehydrogenase [Rhizobium
leguminosarum bv. viciae 3841]
Length = 531
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 47/100 (47%), Positives = 67/100 (67%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G MI I N D+ G++ F+G LG G+NIA+F LGR +
Sbjct: 432 VFSDGKPRFIQIKGINLDADVGSHMIYITNTDVPGMIGFIGTTLGAAGVNIANFQLGRDK 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + ++VL +L+ + +R K FN+D
Sbjct: 492 QGGDAIALLYVDGKVDDAVLAELTAHQAVRQAKPLTFNID 531
>gi|241206175|ref|YP_002977271.1| D-3-phosphoglycerate dehydrogenase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860065|gb|ACS57732.1| D-3-phosphoglycerate dehydrogenase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 531
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 47/100 (47%), Positives = 67/100 (67%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G MI I N D+ G++ F+G LG G+NIA+F LGR +
Sbjct: 432 VFSDGKPRFIQIKGINLDADVGSHMIYITNTDVPGMIGFIGTTLGAAGVNIANFQLGRDK 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + ++VL +L+ + +R K FN+D
Sbjct: 492 QGGDAIALLYVDGKVDDAVLAELTAHQAVRQAKPLTFNID 531
>gi|218663595|ref|ZP_03519525.1| D-3-phosphoglycerate dehydrogenase [Rhizobium etli IE4771]
Length = 535
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/100 (49%), Positives = 67/100 (67%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G MI I N D+ G++ F+G LG G+NIA+F LGR +
Sbjct: 436 VFSDGKPRFIQIKGINLDADVGSHMIYITNTDVPGMIGFIGTTLGGAGVNIANFQLGRDK 495
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + + VLE+L+ + IR K FN+D
Sbjct: 496 QGGDAIALLYVDGEVEDGVLEQLTAHQAIRQAKLLTFNID 535
>gi|190893267|ref|YP_001979809.1| D-3-phosphoglycerate dehydrogenase protein [Rhizobium etli CIAT
652]
gi|190698546|gb|ACE92631.1| D-3-phosphoglycerate dehydrogenase protein [Rhizobium etli CIAT
652]
Length = 531
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/100 (50%), Positives = 67/100 (67%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G MI I N D+ G++ F+G LG G+NIA+F LGR +
Sbjct: 432 VFSDGKPRFIQIKGINLDADVGSHMIYITNTDVPGMIGFIGTTLGAAGVNIANFQLGRDK 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + + VLE+L+ + IR K FNVD
Sbjct: 492 QGGDAIALLYVDGEVEDGVLERLTAHQAIRQAKLLTFNVD 531
>gi|254504693|ref|ZP_05116844.1| D-3-phosphoglycerate dehydrogenase [Labrenzia alexandrii DFL-11]
gi|222440764|gb|EEE47443.1| D-3-phosphoglycerate dehydrogenase [Labrenzia alexandrii DFL-11]
Length = 528
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DGKPR I+++ IN + ++G M+ I N D G + +G LG +NIA F+LGR+
Sbjct: 432 VFADGKPRIIQVKGINMEAELGEHMLYITNEDKPGFIGHLGMELGNNEVNIATFNLGRTA 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
E AI + +D + V+ +L ++ VK F
Sbjct: 492 PGEEAICLVEVDAPVSKEVMARLETVSHVKQVKPLRF 528
>gi|327193458|gb|EGE60354.1| D-3-phosphoglycerate dehydrogenase protein [Rhizobium etli
CNPAF512]
Length = 531
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 49/100 (49%), Positives = 67/100 (67%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G MI I N D+ G++ F+G LG G+NIA+F LGR +
Sbjct: 432 VFSDGKPRFIQIKGINLDADVGSHMIYITNTDVPGMIGFIGTTLGAAGVNIANFQLGRDK 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + + VLE+L+ + IR K FN+D
Sbjct: 492 QGGDAIALLYVDGEVEDGVLEQLTAHQAIRQAKLLTFNID 531
>gi|46201295|ref|ZP_00208046.1| COG0111: Phosphoglycerate dehydrogenase and related dehydrogenases
[Magnetospirillum magnetotacticum MS-1]
Length = 526
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 53/97 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F K R ++I+ I+ + ++G M+ + N D G + +G +LG G+NIA FHLGRS+
Sbjct: 429 LFGGDKARVVEIKGISIEAELGSHMLYVTNQDKPGFIGALGTLLGANGVNIATFHLGRSE 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ AI +D + N +LEK+ + K F
Sbjct: 489 AGGDAILLTQVDQPVSNELLEKVRALPQVVQAKFLTF 525
>gi|304394494|ref|ZP_07376415.1| phosphoglycerate dehydrogenase [Ahrensia sp. R2A130]
gi|303293404|gb|EFL87783.1| phosphoglycerate dehydrogenase [Ahrensia sp. R2A130]
Length = 533
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 43/97 (44%), Positives = 59/97 (60%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN + + G M+ N+D GI+ +G + GE G+NIAHF+LGR+
Sbjct: 435 VFSDGKPRFIQIKGINMEAEAGEHMLYTTNSDAPGIIGKLGTLFGEAGVNIAHFYLGRNH 494
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ AIS + +D + LEKL I K EF
Sbjct: 495 AGGDAISLIQLDHPVPADFLEKLKDTPEIDSAKPLEF 531
>gi|46203185|ref|ZP_00208842.1| COG0111: Phosphoglycerate dehydrogenase and related dehydrogenases
[Magnetospirillum magnetotacticum MS-1]
Length = 534
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF DGKPR I+I+ I+ D M+ + N D G + G++LGE G+N+A F LGR
Sbjct: 438 VFHDGKPRVIEIRGIDIDAAFAPHMLYVRNHDKPGFIGRFGSVLGEAGVNVATFALGREA 497
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+AI+F+ +DG + VL+ + ++ V+ F
Sbjct: 498 EGGNAIAFVAVDGPVPAEVLKTIEAIPQVKRVRPVRF 534
>gi|144897885|emb|CAM74749.1| D-3-phosphoglycerate dehydrogenase [Magnetospirillum
gryphiswaldense MSR-1]
Length = 525
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 54/97 (55%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F KPR + I+ I + ++G M+ + N D G + +G++LG G+NIA FHLGRS+
Sbjct: 429 LFGGDKPRVVAIKGIPIEAELGSHMLYVTNQDKPGFIGALGSLLGARGVNIATFHLGRSE 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ AI +D + +++L+++ + K F
Sbjct: 489 AGGDAILLTQVDQPLTDAILDEVKALPHVVQAKALNF 525
>gi|154252585|ref|YP_001413409.1| D-3-phosphoglycerate dehydrogenase [Parvibaculum lavamentivorans
DS-1]
gi|154156535|gb|ABS63752.1| D-3-phosphoglycerate dehydrogenase [Parvibaculum lavamentivorans
DS-1]
Length = 525
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 56/97 (57%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFS G PR I+I+ +N + +GR M+ + N D G + +G+ LG+ GINIA+F+LGR +
Sbjct: 429 VFSGGLPRLIQIKSVNMEAALGRHMLYVTNLDKPGFIGALGSTLGKAGINIANFNLGREK 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ AI + +D + + L ++ + VK F
Sbjct: 489 AGGDAICLIEVDADVPAATLAEIQALPHVVQVKALSF 525
>gi|218675485|ref|ZP_03525154.1| D-3-phosphoglycerate dehydrogenase [Rhizobium etli GR56]
Length = 531
Score = 120 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 49/100 (49%), Positives = 67/100 (67%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G MI I N D+ G++ F+G LG G+NIA+F LGR +
Sbjct: 432 VFSDGKPRFIQIKGINLDADVGSHMIYITNTDVPGMIGFIGTTLGTAGVNIANFQLGRDK 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + + VLE+L+ + IR K FN+D
Sbjct: 492 QGGDAIALLYVDGEVEDGVLERLTAHQAIRQAKLLTFNID 531
>gi|209550768|ref|YP_002282685.1| D-3-phosphoglycerate dehydrogenase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536524|gb|ACI56459.1| D-3-phosphoglycerate dehydrogenase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 531
Score = 120 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 49/100 (49%), Positives = 67/100 (67%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G MI I N D+ G++ F+G LG G+NIA+F LGR +
Sbjct: 432 VFSDGKPRFIQIKGINLDADVGSHMIYITNTDVPGMIGFIGTTLGTAGVNIANFQLGRDK 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + ++VL +L+ N IR K FN+D
Sbjct: 492 QGGDAIALLYVDGDVDDTVLAQLTANQAIRQAKLLTFNID 531
>gi|298292958|ref|YP_003694897.1| D-3-phosphoglycerate dehydrogenase [Starkeya novella DSM 506]
gi|296929469|gb|ADH90278.1| D-3-phosphoglycerate dehydrogenase [Starkeya novella DSM 506]
Length = 528
Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG+PR ++I+ I D + M+ + N D G V ++LG+ GINIA F LGR +
Sbjct: 432 VFADGRPRIVEIKGIKVDAEFAPSMLYVTNEDRPGFVGRFASLLGDAGINIATFALGRDR 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +DG + +L+K+ +++ K F
Sbjct: 492 QGGDAIALVEVDGKVPAELLDKVQQIPSVKQAKPLVF 528
>gi|118588317|ref|ZP_01545726.1| D-3-phosphoglycerate dehydrogenase [Stappia aggregata IAM 12614]
gi|118439023|gb|EAV45655.1| D-3-phosphoglycerate dehydrogenase [Stappia aggregata IAM 12614]
Length = 528
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 57/97 (58%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DGKPR I+++ IN + ++G M+ I N D G + +G LG G+NIA FHLGR
Sbjct: 432 VFADGKPRIIQVKGINMEAELGPQMLYITNEDKPGFIGHLGMELGNSGVNIATFHLGRLA 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ AI + +DG + VL +L ++ VK +F
Sbjct: 492 PGDDAICLVEVDGDVSPDVLARLEAVSHVKQVKALKF 528
>gi|86359045|ref|YP_470937.1| D-3-phosphoglycerate dehydrogenase [Rhizobium etli CFN 42]
gi|86283147|gb|ABC92210.1| D-3-phosphoglycerate dehydrogenase protein [Rhizobium etli CFN 42]
Length = 531
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 48/100 (48%), Positives = 66/100 (66%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G MI I N D+ G++ F+G LG G+NIA+F LGR +
Sbjct: 432 VFSDGKPRFIQIKGINLDADVGSHMIYITNTDVPGMIGFIGTTLGTAGVNIANFQLGRDK 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + + VL +L+ + IR K FN+D
Sbjct: 492 QGGDAIALLYVDGEVEDGVLTQLTAHQAIRQAKLLTFNID 531
>gi|158422609|ref|YP_001523901.1| D-3-phosphoglycerate dehydrogenase [Azorhizobium caulinodans ORS
571]
gi|158329498|dbj|BAF86983.1| D-3-phosphoglycerate dehydrogenase [Azorhizobium caulinodans ORS
571]
Length = 528
Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 53/97 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG+PR + I+ I D M+ + N D G + ++LG+ G+NIA F LGR
Sbjct: 432 VFADGQPRIVDIKGIKVDAGFAPNMLYVTNEDKPGFIGRFASLLGDAGVNIATFALGRDH 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +DG + VL K+S +R VKQ F
Sbjct: 492 PGGDAIALVEVDGPVPADVLGKVSALPHVRQVKQLRF 528
>gi|255264452|ref|ZP_05343794.1| phosphoglycerate dehydrogenase [Thalassiobium sp. R2A62]
gi|255106787|gb|EET49461.1| phosphoglycerate dehydrogenase [Thalassiobium sp. R2A62]
Length = 530
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 44/99 (44%), Positives = 61/99 (61%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IG+ M+ N D+ GI+ +G +GE G+NIA+F LGR+
Sbjct: 432 VFSDGKPRFIQIKGINIDAEIGQHMLYTTNEDVPGIIGTLGQTMGENGVNIANFTLGRAD 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L ID + V+ KL VK +F+V
Sbjct: 492 RGGEAIALLYIDDPVAADVIAKLEATEMFTQVKPLDFDV 530
>gi|218509868|ref|ZP_03507746.1| D-3-phosphoglycerate dehydrogenase [Rhizobium etli Brasil 5]
Length = 254
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 49/100 (49%), Positives = 67/100 (67%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G MI I N D+ G++ F+G LG G+NIA+F LGR +
Sbjct: 155 VFSDGKPRFIQIKGINLDADVGSHMIYITNTDVPGMIGFIGTTLGAAGVNIANFQLGRDK 214
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + + VLE+L+ + IR K FN+D
Sbjct: 215 QGGDAIALLYVDGEVEDGVLEQLTAHQAIRQAKLLTFNID 254
>gi|46198894|ref|YP_004561.1| D-3-phosphoglycerate dehydrogenase [Thermus thermophilus HB27]
gi|46196518|gb|AAS80934.1| D-3-phosphoglycerate dehydrogenase [Thermus thermophilus HB27]
Length = 521
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 44/97 (45%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V G+PR + I + +V M+ VN D G+V VG +LGE G+NIA LGR
Sbjct: 425 VVIGGRPRLVGIDDYALEVVPEGYMLVCVNYDRPGVVGQVGTLLGEAGVNIAGMQLGRDV 484
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D VLE L + V E
Sbjct: 485 PGGRALFVLTVDQKPSPEVLEALRALPVLERVDLVEL 521
>gi|254473015|ref|ZP_05086413.1| phosphoglycerate dehydrogenase [Pseudovibrio sp. JE062]
gi|211957736|gb|EEA92938.1| phosphoglycerate dehydrogenase [Pseudovibrio sp. JE062]
Length = 532
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF D KPR I+I+ IN + ++G M+ + N D G + +G+ILG+ INIA F+LGR
Sbjct: 432 VFGDQKPRIIQIKGINMEAELGENMLYVTNQDKPGFIGQLGSILGDAKINIATFNLGRKV 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
E AI + IDG I + + +++ + K F
Sbjct: 492 EGEEAICLVEIDGEIAEATVNEIAAIEQVNQAKLLHF 528
>gi|55980921|ref|YP_144218.1| D-3-phosphoglycerate dehydrogenase [Thermus thermophilus HB8]
gi|55772334|dbj|BAD70775.1| D-3-phosphoglycerate dehydrogenase [Thermus thermophilus HB8]
Length = 521
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 44/97 (45%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V G+PR + I + +V M+ VN D G+V VG +LGE G+NIA LGR
Sbjct: 425 VVIGGRPRLVGIDDYALEVVPEGYMLVCVNYDRPGVVGQVGTLLGEAGVNIAGMQLGRDV 484
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D VLE L + V E
Sbjct: 485 PGGRALFVLTVDQKPSPEVLEALRALPVLERVDLVEL 521
>gi|110635490|ref|YP_675698.1| D-3-phosphoglycerate dehydrogenase [Mesorhizobium sp. BNC1]
gi|110286474|gb|ABG64533.1| D-3-phosphoglycerate dehydrogenase [Chelativorans sp. BNC1]
Length = 532
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 61/99 (61%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D ++G M+ N D GI+ +G I G++G+NIA+F LGR++
Sbjct: 432 VFSDGKPRFIQIKGINLDAEVGEHMLYTTNNDTPGIIGQLGTICGKHGVNIANFQLGRNR 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D VLE+L +I K F+V
Sbjct: 492 PGGDAIALLYLDAPFPQPVLEELKSTGSIISAKPLRFDV 530
>gi|299134302|ref|ZP_07027495.1| D-3-phosphoglycerate dehydrogenase [Afipia sp. 1NLS2]
gi|298591049|gb|EFI51251.1| D-3-phosphoglycerate dehydrogenase [Afipia sp. 1NLS2]
Length = 529
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V++DG PR + I+ I D + G+ MI I N D G + ++LG+ +NIA FHLGR+Q
Sbjct: 433 VYADGAPRLVNIKGIRVDAEFGKSMIYITNEDKPGFIGQFASLLGDAKVNIATFHLGRNQ 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +DG + +L K++ ++ K F
Sbjct: 493 QGGDAIALVEVDGPVPAEILAKVAKLPHVKQAKALTF 529
>gi|83312292|ref|YP_422556.1| D-3-phosphoglycerate dehydrogenase [Magnetospirillum magneticum
AMB-1]
gi|82947133|dbj|BAE51997.1| Phosphoglycerate dehydrogenase and related dehydrogenase
[Magnetospirillum magneticum AMB-1]
Length = 526
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F K R ++I+ I+ + ++G+ M+ + N D G + +G++LG G+NIA FHLGRS+
Sbjct: 429 LFGGNKARVVEIKGISIEAELGQNMLYVTNQDKPGFIGALGSLLGANGVNIATFHLGRSE 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ AI +D + N +LEK+ + K F
Sbjct: 489 AGGDAILLTQVDQPVSNDLLEKVRALPQVVQAKFLTF 525
>gi|300709559|ref|YP_003735373.1| D-3-phosphoglycerate dehydrogenase [Halalkalicoccus jeotgali B3]
gi|299123242|gb|ADJ13581.1| D-3-phosphoglycerate dehydrogenase [Halalkalicoccus jeotgali B3]
Length = 537
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 44/98 (44%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+D PR ++I + D M+ N D G + F+G +LGE GINIA R
Sbjct: 431 LFADDDPRIVRIDDYRVDAIPHGHMLVARNYDEPGTIGFIGTVLGENGINIAGMFNAREA 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
AI+ +D + +L +L + I + +
Sbjct: 491 IGGEAITVYDLDEEVGEELLAQLEDDERIIEARYITLD 528
>gi|163758780|ref|ZP_02165867.1| D-3-phosphoglycerate dehydrogenase [Hoeflea phototrophica DFL-43]
gi|162284070|gb|EDQ34354.1| D-3-phosphoglycerate dehydrogenase [Hoeflea phototrophica DFL-43]
Length = 531
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 49/100 (49%), Positives = 68/100 (68%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G+ MI I N D+ G++ F+G+ LG+ G+NIA+FHLGR
Sbjct: 432 VFSDGKPRFIQIKGINMDADVGQHMIYIANTDVPGMIGFMGSTLGDAGVNIANFHLGRET 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
+ AI+ L +D + VL KL+ + I+ K FNVD
Sbjct: 492 ESGDAIALLYVDELVSQDVLAKLTAHHAIKQAKPLVFNVD 531
>gi|170744437|ref|YP_001773092.1| D-3-phosphoglycerate dehydrogenase [Methylobacterium sp. 4-46]
gi|168198711|gb|ACA20658.1| D-3-phosphoglycerate dehydrogenase [Methylobacterium sp. 4-46]
Length = 531
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 51/97 (52%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF DG PR ++I+ I + M+ + NAD G + G +LGE G+N+A FHLGR +
Sbjct: 435 VFQDGVPRIVEIRSIPLEAAFAPHMLYVRNADQPGFIGRFGTLLGEAGVNVATFHLGRDR 494
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI F +D + ++L ++ ++ + F
Sbjct: 495 PGGDAICFAAVDQPVSPALLRQIEAIPQVKRARAVRF 531
>gi|17939923|emb|CAD19520.1| d-3 phosphoglycerate dehydrogenase, L-serine dehydratase [Rhizobium
etli]
Length = 125
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 48/100 (48%), Positives = 66/100 (66%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G MI I N D+ G++ F+G LG G+NIA+F LGR +
Sbjct: 26 VFSDGKPRFIQIKGINLDADVGSHMIYITNTDVPGMIGFIGTTLGTAGVNIANFQLGRDK 85
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + + VL +L+ + IR K FN+D
Sbjct: 86 QGGDAIALLYVDGEVEDGVLTQLTAHQAIRQAKLLTFNID 125
>gi|218295353|ref|ZP_03496166.1| D-3-phosphoglycerate dehydrogenase [Thermus aquaticus Y51MC23]
gi|218243985|gb|EED10511.1| D-3-phosphoglycerate dehydrogenase [Thermus aquaticus Y51MC23]
Length = 521
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 43/92 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V GKPR + I + +V M+ VN D G+V VG +LGE G+NIA LGR
Sbjct: 425 VVIGGKPRLVGIDDYALEVVPEGYMLVCVNYDRPGVVGQVGTLLGEAGVNIAGMQLGRDV 484
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D VLE L + V
Sbjct: 485 PGGRALFVLTVDQKPAPEVLEALRALPVLERV 516
>gi|126738641|ref|ZP_01754346.1| D-3-phosphoglycerate dehydrogenase [Roseobacter sp. SK209-2-6]
gi|126720440|gb|EBA17146.1| D-3-phosphoglycerate dehydrogenase [Roseobacter sp. SK209-2-6]
Length = 531
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D ++G M+ N D+ GI+ +G +GE+G+NIA+F LGRS+
Sbjct: 432 VFSDGKPRFIQIKGINIDAEVGAHMLYTTNNDVPGIIGSLGQTMGEHGVNIANFTLGRSE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + KL+ +K +F+V
Sbjct: 492 AGGEAIALLYVDEPVPAEARAKLAETDLFNQIKPLQFDV 530
>gi|218516339|ref|ZP_03513179.1| D-3-phosphoglycerate dehydrogenase [Rhizobium etli 8C-3]
Length = 231
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 49/100 (49%), Positives = 67/100 (67%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G MI I N D+ G++ F+G LG G+NIA+F LGR +
Sbjct: 132 VFSDGKPRFIQIKGINLDADVGSHMIYITNTDVPGMIGFIGTTLGAAGVNIANFQLGRDK 191
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG + + VLE+L+ + IR K FN+D
Sbjct: 192 QGGDAIALLYVDGEVEDGVLEQLTAHQAIRQAKLLTFNID 231
>gi|222086960|ref|YP_002545494.1| D-3-phosphoglycerate dehydrogenase protein [Agrobacterium
radiobacter K84]
gi|221724408|gb|ACM27564.1| D-3-phosphoglycerate dehydrogenase protein [Agrobacterium
radiobacter K84]
Length = 531
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 49/100 (49%), Positives = 67/100 (67%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G M+ + N D+ G++ F+G+ LG G+NIA+F LGR +
Sbjct: 432 VFSDGKPRFIQIKGINLDADVGNHMVYLANTDVPGMIGFIGSTLGSAGVNIANFQLGRDK 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG I + VL KL+ + IR K FNVD
Sbjct: 492 QGGDAIALLYVDGPINDEVLGKLTAHQAIRQAKPLVFNVD 531
>gi|87200693|ref|YP_497950.1| D-3-phosphoglycerate dehydrogenase [Novosphingobium aromaticivorans
DSM 12444]
gi|87136374|gb|ABD27116.1| D-3-phosphoglycerate dehydrogenase [Novosphingobium aromaticivorans
DSM 12444]
Length = 540
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F +G+PR ++I I + D+ M+ IVN+D G + +G +LG+ INI FHLGR +
Sbjct: 443 LFGNGQPRLVEIFGIGIEADLDGDMLYIVNSDAPGFIGRIGTLLGQNTINIGTFHLGRRE 502
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D + VL++ +R VK +F
Sbjct: 503 AGGEAVLLLSLDNPVSEDVLKEAREIQGVRVVKALKF 539
>gi|326389093|ref|ZP_08210675.1| D-3-phosphoglycerate dehydrogenase [Novosphingobium nitrogenifigens
DSM 19370]
gi|326206693|gb|EGD57528.1| D-3-phosphoglycerate dehydrogenase [Novosphingobium nitrogenifigens
DSM 19370]
Length = 528
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F +G+PR ++I +I + D+ M+ IVN D G + +G +LG+ INI FHLGR Q
Sbjct: 431 LFGNGQPRLVEIFDIAVEADLDGDMLYIVNTDAPGFIGSIGTLLGQSNINIGTFHLGRRQ 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D + + VL K +R VK +F
Sbjct: 491 AGGEAVLLLSVDSPVSDEVLAKAKTLNGVRLVKALKF 527
>gi|209965081|ref|YP_002297996.1| D-3-phosphoglycerate dehydrogenase [Rhodospirillum centenum SW]
gi|209958547|gb|ACI99183.1| D-3-phosphoglycerate dehydrogenase [Rhodospirillum centenum SW]
Length = 525
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 57/97 (58%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F KPR ++I+++ + ++ M+ I N D G + +G LG+ G+NIA FHLGR+
Sbjct: 429 LFGGDKPRLVEIEDVPIEAEVTPNMLFIRNEDKPGFIGKLGTALGDAGVNIATFHLGRTA 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ E AI+ +C+D + + ++E++ ++ K F
Sbjct: 489 AGETAIALVCVDQPLGDDLVERIRALPSVVRAKALTF 525
>gi|258593832|emb|CBE70173.1| D-3-phosphoglycerate dehydrogenase [NC10 bacterium 'Dutch
sediment']
Length = 526
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 51/96 (53%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+FS +PR ++I E + ++ N D+ G++ +G +LG++ +NIA LGR Q
Sbjct: 430 LFSRREPRVVRINEFRLEAIPEGYLLIFSNLDVPGVIGTIGTLLGKHRVNIAGMQLGREQ 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+S + +D + V++++ I FVK +
Sbjct: 490 PGGRAVSVVNVDNPVPAHVIDEIRRLPNIVFVKLVK 525
>gi|85373221|ref|YP_457283.1| D-3-phosphoglycerate dehydrogenase [Erythrobacter litoralis
HTCC2594]
gi|84786304|gb|ABC62486.1| phosphoglycerate dehydrogenase [Erythrobacter litoralis HTCC2594]
Length = 527
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F PR ++I + + + M+ IVN D G + +G +LGE+GINI F+LGR
Sbjct: 431 LFGSDAPRLVEIFGVRIEAQLEGHMLYIVNEDAPGFIGRIGTLLGEHGINIGTFNLGRRS 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D I V++ ++ V F
Sbjct: 491 AGGEAVLLLSVDQPIPQDVVKAACALDGVKTVMPLSF 527
>gi|119383566|ref|YP_914622.1| D-3-phosphoglycerate dehydrogenase [Paracoccus denitrificans
PD1222]
gi|119373333|gb|ABL68926.1| D-3-phosphoglycerate dehydrogenase [Paracoccus denitrificans
PD1222]
Length = 529
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IG M+ N D+ G++ +G LG+ G+NIA+F LGR++
Sbjct: 431 VFSDGKPRFIQIRGINVDAEIGEHMLYTRNRDVPGVIGALGMTLGDLGVNIANFTLGRTK 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ + AI+ L +D + LE L V+ +F V
Sbjct: 491 TGDDAIAILYLDEPLKPEALEALRATGKFLQVRPLQFEV 529
>gi|260891940|ref|YP_003238037.1| D-3-phosphoglycerate dehydrogenase [Ammonifex degensii KC4]
gi|260864081|gb|ACX51187.1| D-3-phosphoglycerate dehydrogenase [Ammonifex degensii KC4]
Length = 527
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 41/92 (44%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+PR ++I D ++ I + D I+ +G ++G + INIA +GR +
Sbjct: 434 GKEPRVVEIDGYRVDAVPEGYVLFIPHLDRPRIIGRIGTLIGAHDINIAAMQVGRKEIGG 493
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
AI L +D + L +++ + VK
Sbjct: 494 KAIMLLSVDSPVPEETLREIAKVENVLDVKML 525
>gi|169830231|ref|YP_001716213.1| D-3-phosphoglycerate dehydrogenase [Candidatus Desulforudis
audaxviator MP104C]
gi|169637075|gb|ACA58581.1| D-3-phosphoglycerate dehydrogenase [Candidatus Desulforudis
audaxviator MP104C]
Length = 526
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 40/97 (41%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F PR + I D M+ I + D I+ VG ++G++ +NIA +GR
Sbjct: 430 LFRGNDPRVVFIDGYRVDAVTEGHMLIIPHIDRPRIIGAVGTLIGQHDVNIAAMQVGRKV 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID + LE + I V+
Sbjct: 490 IGGRAVMVLMIDSPVPPETLEAIRRVDGILDVRMVSL 526
>gi|239832773|ref|ZP_04681102.1| D-3-phosphoglycerate dehydrogenase [Ochrobactrum intermedium LMG
3301]
gi|239825040|gb|EEQ96608.1| D-3-phosphoglycerate dehydrogenase [Ochrobactrum intermedium LMG
3301]
Length = 538
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 61/98 (62%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G M+ + N D+ G++ +G I G++ +NIA+F LGR
Sbjct: 438 FSDGKPRFIQIKGINLDAEVGPHMLYVTNKDVPGMIGLLGTICGKHNVNIANFSLGRDHP 497
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D I + L++L+ I+ EFNV
Sbjct: 498 GGDAIAMLYVDEQIPQAALDELTAQEAIKAATPLEFNV 535
>gi|114763689|ref|ZP_01443083.1| D-3-phosphoglycerate dehydrogenase [Pelagibaca bermudensis
HTCC2601]
gi|114543690|gb|EAU46703.1| D-3-phosphoglycerate dehydrogenase [Roseovarius sp. HTCC2601]
Length = 531
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 63/99 (63%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D ++G M+ N D+ GI+ +G +LGE+ +N+A+F LGRS
Sbjct: 432 VFSDGKPRFIQIKGINIDAEVGEHMLYTTNEDVPGIIGKLGTMLGEHKVNLANFTLGRSA 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ +D ++ SV++ L R VK EF+V
Sbjct: 492 QGGEAIAIAYLDEAMDASVVDALKATGLFRQVKPLEFDV 530
>gi|220926557|ref|YP_002501859.1| D-3-phosphoglycerate dehydrogenase [Methylobacterium nodulans ORS
2060]
gi|219951164|gb|ACL61556.1| D-3-phosphoglycerate dehydrogenase [Methylobacterium nodulans ORS
2060]
Length = 531
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 52/97 (53%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF DG PR ++I+ I + M+ + NAD G + G +LGE G+N+A FHLGR +
Sbjct: 435 VFHDGVPRTVEIRSIPLEAAFAPHMLYVRNADQPGFIGRFGTLLGEAGVNVATFHLGRDR 494
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI F+ +D + ++L ++ ++ + F
Sbjct: 495 PGGDAICFVAVDQPVSPALLRQIEAIPQVKRARAVRF 531
>gi|217977556|ref|YP_002361703.1| D-3-phosphoglycerate dehydrogenase [Methylocella silvestris BL2]
gi|217502932|gb|ACK50341.1| D-3-phosphoglycerate dehydrogenase [Methylocella silvestris BL2]
Length = 528
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 51/97 (52%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DGKPR I I I D +G M+ + N D G + +ILG GINIA F LGR +
Sbjct: 432 VFNDGKPRIIMINGIKVDAAVGPSMVYVTNEDRPGFIGRFASILGNAGINIATFALGRDR 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+I+ + +D ++ VL+ + ++ K F
Sbjct: 492 EGGSSIALVEVDENVPEKVLDAVRRLPGVKEAKALRF 528
>gi|83588894|ref|YP_428903.1| D-3-phosphoglycerate dehydrogenase [Moorella thermoacetica ATCC
39073]
gi|83571808|gb|ABC18360.1| D-3-phosphoglycerate dehydrogenase [Moorella thermoacetica ATCC
39073]
Length = 525
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 42/93 (45%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G+PR + + + D ++ I + D I+ V +G++G+NIA +GR +
Sbjct: 433 GEPRLVNLDGYSVDTIPAGHLLVIPHLDRPRIIGPVALAIGDHGVNIAAMQVGRRERGGQ 492
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ + +D + + L+ + + V+
Sbjct: 493 AVMLISVDSEVPRAALDAIRQVDGVLDVRYISL 525
>gi|295696411|ref|YP_003589649.1| D-3-phosphoglycerate dehydrogenase [Bacillus tusciae DSM 2912]
gi|295412013|gb|ADG06505.1| D-3-phosphoglycerate dehydrogenase [Bacillus tusciae DSM 2912]
Length = 527
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 44/97 (45%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+ PR ++I + DV ++ + D GI+ VG++LG G+NIA +GR +
Sbjct: 431 LFNGLGPRIVQIDGYSVDVAPQGTLLITRHIDQPGIIGQVGSLLGAAGVNIAAMQVGRKE 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + L + I V+
Sbjct: 491 LGGQAVMVLAVDKPVDAETLANIGQVPGILAVRDVSL 527
>gi|260429359|ref|ZP_05783336.1| phosphoserine aminotransferase [Citreicella sp. SE45]
gi|260419982|gb|EEX13235.1| phosphoserine aminotransferase [Citreicella sp. SE45]
Length = 918
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 64/99 (64%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D ++G M+ N D+ GI+ +G +LG++ +N+A+F LGRS
Sbjct: 819 VFSDGKPRFIQIKGINIDAEVGEHMLYTTNEDVPGIIGKLGTLLGDHKVNLANFTLGRSA 878
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ +D ++ +SV++ L R VK EF++
Sbjct: 879 QGAEAIAISYLDEALDDSVVKALKDTGLFRQVKPLEFDL 917
>gi|209886269|ref|YP_002290126.1| phosphoglycerate dehydrogenase [Oligotropha carboxidovorans OM5]
gi|209874465|gb|ACI94261.1| phosphoglycerate dehydrogenase [Oligotropha carboxidovorans OM5]
Length = 529
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V++DG PR + I+ I D + G+ MI I N D G + ++LG+ +NIA FHLGR+Q
Sbjct: 433 VYADGAPRLVNIKGIRVDAEFGKSMIYITNEDKPGFIGKFASLLGDAKVNIATFHLGRNQ 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +DG + +L K++ ++ K F
Sbjct: 493 QGGDAIALVEVDGPVPQEILTKVAALPQVKQAKALAF 529
>gi|149912706|ref|ZP_01901240.1| D-3-phosphoglycerate dehydrogenase [Roseobacter sp. AzwK-3b]
gi|149813112|gb|EDM72938.1| D-3-phosphoglycerate dehydrogenase [Roseobacter sp. AzwK-3b]
Length = 531
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 64/99 (64%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IGR M+ N D GI+ +G +GE G+NIA+F LGRS
Sbjct: 432 VFSDGKPRFIQIKGINIDAEIGRHMLYTTNNDEPGIIGTLGQTMGENGVNIANFTLGRSN 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D I +V++KL + V+ +F+V
Sbjct: 492 AGGEAIALLYVDAPIETAVIKKLEATGKFQQVRALQFDV 530
>gi|83952581|ref|ZP_00961312.1| D-3-phosphoglycerate dehydrogenase [Roseovarius nubinhibens ISM]
gi|83836254|gb|EAP75552.1| D-3-phosphoglycerate dehydrogenase [Roseovarius nubinhibens ISM]
Length = 531
Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 63/99 (63%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IG M+ N D GI+ +G +G+ G+NIA+F LGRSQ
Sbjct: 432 VFSDGKPRFIQIKGINIDAEIGAHMLYTTNEDEPGIIGMLGQTMGQNGVNIANFTLGRSQ 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + V+++L + V+ +F+V
Sbjct: 492 AGGEAIALLYVDAEVPAPVIKQLEDTGMFKQVRPLQFDV 530
>gi|75677149|ref|YP_319570.1| D-3-phosphoglycerate dehydrogenase [Nitrobacter winogradskyi
Nb-255]
gi|74422019|gb|ABA06218.1| D-3-phosphoglycerate dehydrogenase [Nitrobacter winogradskyi
Nb-255]
Length = 529
Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V++DG PR + I+ I D + G+ MI + N D G + ++LG+ G+NIA F+LGR
Sbjct: 433 VYADGHPRLVDIKGIRVDAEFGKSMIYVTNEDRPGFIGKFASLLGDAGVNIATFNLGRHS 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +DGS+ +VL K+ +R K F
Sbjct: 493 QGGDAIALVEVDGSVPENVLAKVQALPQVRQAKALTF 529
>gi|147676347|ref|YP_001210562.1| D-3-phosphoglycerate dehydrogenase [Pelotomaculum thermopropionicum
SI]
gi|146272444|dbj|BAF58193.1| phosphoglycerate dehydrogenase and related dehydrogenases
[Pelotomaculum thermopropionicum SI]
Length = 526
Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 41/97 (42%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F R + I + D M+ I + D I+ VGN++G + INI+ +GR
Sbjct: 430 IFGKVDQRIVSIDGYHVDAVPEGHMLYIPHIDKPRIIGPVGNLIGTHNINISGMQVGRKV 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID + + +++ + VK
Sbjct: 490 IGGKAVMLLNIDSPVPEETMAEIAKIDGVLGVKSVSI 526
>gi|320450108|ref|YP_004202204.1| phosphoglycerate dehydrogenase [Thermus scotoductus SA-01]
gi|320150277|gb|ADW21655.1| phosphoglycerate dehydrogenase [Thermus scotoductus SA-01]
Length = 521
Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 42/88 (47%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
GKPR + I + +V M+ +N D G+V VG +LGE G+NIA LGR
Sbjct: 429 GKPRLVGIDDYALEVVPEGYMLVCINYDRPGVVGQVGTLLGEAGVNIAGMQLGRDVPGGR 488
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D VLE L + V
Sbjct: 489 ALFVLTVDEKPSPEVLEALRALPVLERV 516
>gi|167629222|ref|YP_001679721.1| d-3-phosphoglycerate dehydrogenase [Heliobacterium modesticaldum
Ice1]
gi|167591962|gb|ABZ83710.1| d-3-phosphoglycerate dehydrogenase [Heliobacterium modesticaldum
Ice1]
Length = 526
Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
KPRF+ I + D+ M+ + + D I+ +G I+GE+ +NIA HLGR +
Sbjct: 433 NKPRFVSIDGYDMDMAPEGHMLVVPHTDKPRIIGQLGTIIGEHNVNIAGMHLGRKDFGGN 492
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ L IDG + +VL L+ + VK
Sbjct: 493 AVAILTIDGPVPAAVLTDLAKIDGVADVKYVNL 525
>gi|56698179|ref|YP_168551.1| D-3-phosphoglycerate dehydrogenase [Ruegeria pomeroyi DSS-3]
gi|56679916|gb|AAV96582.1| D-3-phosphoglycerate dehydrogenase [Ruegeria pomeroyi DSS-3]
Length = 531
Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 60/99 (60%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IG M+ N D+ GI+ +G +GE G+NIA+F LGR+
Sbjct: 432 VFSDGKPRFIQIKGINVDAEIGAHMLYTTNEDVPGIIGTLGQTMGENGVNIANFTLGRAA 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + KL+ +K EF+V
Sbjct: 492 AGGEAIALLYVDEPVPAEARAKLAETGLFNQIKPLEFDV 530
>gi|92116697|ref|YP_576426.1| D-3-phosphoglycerate dehydrogenase [Nitrobacter hamburgensis X14]
gi|91799591|gb|ABE61966.1| D-3-phosphoglycerate dehydrogenase [Nitrobacter hamburgensis X14]
Length = 529
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 57/97 (58%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V++DGKPR + I+ I D + G+ MI + N D G + ++LG+ G+NIA F+LGR
Sbjct: 433 VYADGKPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGKFASLLGDAGVNIATFNLGRHG 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +DG++ +VL K+ ++ VK F
Sbjct: 493 QGGDAIALVEVDGNVPENVLAKVQALPQVKQVKALTF 529
>gi|52080816|ref|YP_079607.1| D-3-phosphoglycerate dehydrogenase [Bacillus licheniformis ATCC
14580]
gi|52786187|ref|YP_092016.1| D-3-phosphoglycerate dehydrogenase [Bacillus licheniformis ATCC
14580]
gi|319645226|ref|ZP_07999459.1| SerA protein [Bacillus sp. BT1B_CT2]
gi|52004027|gb|AAU23969.1| phosphoglycerate dehydrogenase SerA [Bacillus licheniformis ATCC
14580]
gi|52348689|gb|AAU41323.1| SerA [Bacillus licheniformis ATCC 14580]
gi|317393035|gb|EFV73829.1| SerA protein [Bacillus sp. BT1B_CT2]
Length = 525
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F R + + + D ++ I + D G + VG ILG++ INIA +GR +
Sbjct: 432 FGG---RIVALNGFDIDFYPAGHLVYIHHQDKPGAIGHVGRILGDHDINIATMQVGRKEK 488
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L D + + +L +L I VK +
Sbjct: 489 GGEAIMMLSFDRHLEDDILAELKNIPDIVSVKAIDL 524
>gi|254700347|ref|ZP_05162175.1| D-3-phosphoglycerate dehydrogenase [Brucella suis bv. 5 str. 513]
gi|261750842|ref|ZP_05994551.1| D-3-phosphoglycerate dehydrogenase [Brucella suis bv. 5 str. 513]
gi|261740595|gb|EEY28521.1| D-3-phosphoglycerate dehydrogenase [Brucella suis bv. 5 str. 513]
Length = 533
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/98 (42%), Positives = 61/98 (62%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G M+ + N D+ G++ +G I G++ +NIA+F LGR Q
Sbjct: 433 FSDGKPRFIQIKGINLDAEVGPHMLYVTNKDVPGMIGLLGTICGKHDVNIANFALGRDQP 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D I + L++L IR EFNV
Sbjct: 493 GGDAIAMLYVDEQIPQAALDELMAQEAIRAATPLEFNV 530
>gi|260432240|ref|ZP_05786211.1| phosphoglycerate dehydrogenase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416068|gb|EEX09327.1| phosphoglycerate dehydrogenase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 531
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D ++G M+ N D+ GI+ +G +GE+G+NIA+F LGR++
Sbjct: 432 VFSDGKPRFIQIKGINIDAEVGAHMLYTTNEDVPGIIGTLGKTMGEHGVNIANFTLGRAE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + KL+ +K EF+V
Sbjct: 492 AGGEAIALLYVDEPVPAEARAKLAETGLFTQIKPLEFDV 530
>gi|225628254|ref|ZP_03786288.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti str. Cudo]
gi|225616100|gb|EEH13148.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti str. Cudo]
Length = 538
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G M+ + N D+ G++ +G I G++ +NIA+F LGR
Sbjct: 438 FSDGKPRFIQIKGINLDAEVGPHMLYVTNKDVPGMIGLLGTICGKHDVNIANFALGRDHP 497
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D I + L++L IR EFNV
Sbjct: 498 GGDAIAMLYVDEQIPQAALDELMAQEAIRAATPLEFNV 535
>gi|149202983|ref|ZP_01879954.1| D-3-phosphoglycerate dehydrogenase [Roseovarius sp. TM1035]
gi|149143529|gb|EDM31565.1| D-3-phosphoglycerate dehydrogenase [Roseovarius sp. TM1035]
Length = 531
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/99 (40%), Positives = 64/99 (64%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IGR M+ N D+ GI+ +G +G++G+NIA+F LGRS
Sbjct: 432 VFSDGKPRFIQIKGINIDAEIGRHMLYTTNEDVPGIIGTLGMTMGDHGVNIANFTLGRSD 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + + ++ L + +++ F+V
Sbjct: 492 AGGEAIALLYVDAPVPEAAIKALHATGKFQQIRELRFDV 530
>gi|254466037|ref|ZP_05079448.1| phosphoglycerate dehydrogenase [Rhodobacterales bacterium Y4I]
gi|206686945|gb|EDZ47427.1| phosphoglycerate dehydrogenase [Rhodobacterales bacterium Y4I]
Length = 531
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN + D+G M+ N D+ GI+ +G LG+ G+NIA+F LGR++
Sbjct: 432 VFSDGKPRFIQIKGINLEADVGAHMLYTTNEDVPGIIGTLGQTLGDNGVNIANFTLGRAE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + + KL+ +K EF+V
Sbjct: 492 AGGEAIALLYVDEPVPAEIRAKLAETGLFNQIKPLEFDV 530
>gi|256160401|ref|ZP_05458090.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti M490/95/1]
gi|265998770|ref|ZP_06111327.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti M490/95/1]
gi|262553459|gb|EEZ09228.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti M490/95/1]
Length = 533
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G M+ + N D+ G++ +G I G++ +NIA+F LGR
Sbjct: 433 FSDGKPRFIQIKGINLDAEVGPHMLYVTNKDVPGMIGLLGTICGKHDVNIANFALGRDHP 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D I + L++L IR EFNV
Sbjct: 493 GGDAIAMLYVDEQIPQAALDELMAQEAIRAATPLEFNV 530
>gi|86139432|ref|ZP_01058001.1| D-3-phosphoglycerate dehydrogenase [Roseobacter sp. MED193]
gi|85823935|gb|EAQ44141.1| D-3-phosphoglycerate dehydrogenase [Roseobacter sp. MED193]
Length = 531
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/99 (40%), Positives = 63/99 (63%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D ++G M+ N D+ GI+ +G +GE+G+NIA+F LGR++
Sbjct: 432 VFSDGKPRFIQIKGINIDAEVGAHMLYTTNNDVPGIIGTLGQTMGEHGVNIANFTLGRAE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D ++ KL+ +K +F+V
Sbjct: 492 AGGEAIALLYVDAAVPAEARAKLAETDLFNQIKPLQFDV 530
>gi|260167901|ref|ZP_05754712.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. F5/99]
gi|261757340|ref|ZP_06001049.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. F5/99]
gi|261737324|gb|EEY25320.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. F5/99]
Length = 533
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G M+ + N D+ G++ +G I G++ +NIA+F LGR
Sbjct: 433 FSDGKPRFIQIKGINLDAEVGPHMLYVTNKDVPGMIGLLGTICGKHDVNIANFALGRDHP 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D I + L++L IR EFNV
Sbjct: 493 GGDAIAMLYVDEQIPQAALDELMAQEAIRAATPLEFNV 530
>gi|254453066|ref|ZP_05066503.1| phosphoglycerate dehydrogenase [Octadecabacter antarcticus 238]
gi|198267472|gb|EDY91742.1| phosphoglycerate dehydrogenase [Octadecabacter antarcticus 238]
Length = 516
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IG MI N D+ GI+ +G +G++ +NIA+F LGRS
Sbjct: 417 VFSDGKPRFIQIKGINIDAEIGAHMIYTTNEDVPGIIGTLGQTMGKHNVNIANFTLGRSA 476
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D ++ + L ++ VK F+V
Sbjct: 477 ANGEAIALLYVDETVPAAALAEIEATGMFTQVKPLTFDV 515
>gi|89070040|ref|ZP_01157371.1| D-3-phosphoglycerate dehydrogenase [Oceanicola granulosus HTCC2516]
gi|89044377|gb|EAR50515.1| D-3-phosphoglycerate dehydrogenase [Oceanicola granulosus HTCC2516]
Length = 530
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 60/99 (60%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IG+ M+ N D+ GI+ +G +G G+NIA+F LGRS
Sbjct: 432 VFSDGKPRFIQIKGINIDAEIGQHMLYTTNEDVPGIIGTLGTTMGSNGVNIANFTLGRSA 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + L+ L R VK +F V
Sbjct: 492 AKGEAIALLYVDEEVPAKALDALKQTGMFRQVKTLQFEV 530
>gi|163845265|ref|YP_001622920.1| D-3-phosphoglycerate dehydrogenase [Brucella suis ATCC 23445]
gi|163675988|gb|ABY40098.1| D-3-phosphoglycerate dehydrogenase [Brucella suis ATCC 23445]
Length = 533
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G M+ + N D+ G++ +G I G++ +NIA+F LGR
Sbjct: 433 FSDGKPRFIQIKGINLDAEVGPHMLYVTNKDVPGMIGLLGTICGKHDVNIANFALGRDHP 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D I + L++L IR EFNV
Sbjct: 493 GGDAIAMLYVDEQIPQAALDELMAQEAIRAATPLEFNV 530
>gi|294850937|ref|ZP_06791613.1| phosphoglycerate dehydrogenase [Brucella sp. NVSL 07-0026]
gi|294821580|gb|EFG38576.1| phosphoglycerate dehydrogenase [Brucella sp. NVSL 07-0026]
Length = 533
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G M+ + N D+ G++ +G I G++ +NIA+F LGR
Sbjct: 433 FSDGKPRFIQIKGINLDAEVGPHMLYVTNKDVPGMIGLLGTICGKHDVNIANFALGRDHP 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D I + L++L IR EFNV
Sbjct: 493 GGDAIAMLYVDEQIPQAALDELMAQEAIRAATPLEFNV 530
>gi|254708700|ref|ZP_05170511.1| D-3-phosphoglycerate dehydrogenase [Brucella pinnipedialis B2/94]
gi|261316192|ref|ZP_05955389.1| D-3-phosphoglycerate dehydrogenase [Brucella pinnipedialis B2/94]
gi|261295415|gb|EEX98911.1| D-3-phosphoglycerate dehydrogenase [Brucella pinnipedialis B2/94]
Length = 533
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G M+ + N D+ G++ +G I G++ +NIA+F LGR
Sbjct: 433 FSDGKPRFIQIKGINLDAEVGPHMLYVTNKDVPGMIGLLGTICGKHDVNIANFALGRDHP 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D I + L++L IR EFNV
Sbjct: 493 GGDAIAMLYVDEQIPQAALDELMAQEAIRAATPLEFNV 530
>gi|23502543|ref|NP_698670.1| D-3-phosphoglycerate dehydrogenase [Brucella suis 1330]
gi|148559678|ref|YP_001259539.1| D-3-phosphoglycerate dehydrogenase [Brucella ovis ATCC 25840]
gi|161619616|ref|YP_001593503.1| D-3-phosphoglycerate dehydrogenase [Brucella canis ATCC 23365]
gi|254703466|ref|ZP_05165294.1| D-3-phosphoglycerate dehydrogenase [Brucella suis bv. 3 str. 686]
gi|254708447|ref|ZP_05170275.1| D-3-phosphoglycerate dehydrogenase [Brucella pinnipedialis
M163/99/10]
gi|254714547|ref|ZP_05176358.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti M644/93/1]
gi|254717444|ref|ZP_05179255.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti M13/05/1]
gi|254719689|ref|ZP_05181500.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. 83/13]
gi|256030226|ref|ZP_05443840.1| D-3-phosphoglycerate dehydrogenase [Brucella pinnipedialis
M292/94/1]
gi|256061723|ref|ZP_05451860.1| D-3-phosphoglycerate dehydrogenase [Brucella neotomae 5K33]
gi|256370095|ref|YP_003107606.1| D-3-phosphoglycerate dehydrogenase [Brucella microti CCM 4915]
gi|260568773|ref|ZP_05839241.1| SerA family protein [Brucella suis bv. 4 str. 40]
gi|261219276|ref|ZP_05933557.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti M13/05/1]
gi|261315946|ref|ZP_05955143.1| D-3-phosphoglycerate dehydrogenase [Brucella pinnipedialis
M163/99/10]
gi|261322337|ref|ZP_05961534.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti M644/93/1]
gi|261325728|ref|ZP_05964925.1| phosphoglycerate dehydrogenase [Brucella neotomae 5K33]
gi|261754095|ref|ZP_05997804.1| D-3-phosphoglycerate dehydrogenase [Brucella suis bv. 3 str. 686]
gi|265984704|ref|ZP_06097439.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. 83/13]
gi|265987255|ref|ZP_06099812.1| D-3-phosphoglycerate dehydrogenase [Brucella pinnipedialis
M292/94/1]
gi|306837853|ref|ZP_07470715.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. NF 2653]
gi|306841404|ref|ZP_07474106.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. BO2]
gi|306844678|ref|ZP_07477263.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. BO1]
gi|23348542|gb|AAN30585.1| D-3-phosphoglycerate dehydrogenase [Brucella suis 1330]
gi|148370935|gb|ABQ60914.1| phosphoglycerate dehydrogenase [Brucella ovis ATCC 25840]
gi|161336427|gb|ABX62732.1| D-3-phosphoglycerate dehydrogenase [Brucella canis ATCC 23365]
gi|256000258|gb|ACU48657.1| D-3-phosphoglycerate dehydrogenase [Brucella microti CCM 4915]
gi|260154157|gb|EEW89239.1| SerA family protein [Brucella suis bv. 4 str. 40]
gi|260924365|gb|EEX90933.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti M13/05/1]
gi|261295027|gb|EEX98523.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti M644/93/1]
gi|261301708|gb|EEY05205.1| phosphoglycerate dehydrogenase [Brucella neotomae 5K33]
gi|261304972|gb|EEY08469.1| D-3-phosphoglycerate dehydrogenase [Brucella pinnipedialis
M163/99/10]
gi|261743848|gb|EEY31774.1| D-3-phosphoglycerate dehydrogenase [Brucella suis bv. 3 str. 686]
gi|264659452|gb|EEZ29713.1| D-3-phosphoglycerate dehydrogenase [Brucella pinnipedialis
M292/94/1]
gi|264663296|gb|EEZ33557.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. 83/13]
gi|306274850|gb|EFM56620.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. BO1]
gi|306288510|gb|EFM59862.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. BO2]
gi|306407092|gb|EFM63309.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. NF 2653]
Length = 533
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G M+ + N D+ G++ +G I G++ +NIA+F LGR
Sbjct: 433 FSDGKPRFIQIKGINLDAEVGPHMLYVTNKDVPGMIGLLGTICGKHDVNIANFALGRDHP 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D I + L++L IR EFNV
Sbjct: 493 GGDAIAMLYVDEQIPQAALDELMAQEAIRAATPLEFNV 530
>gi|116071264|ref|ZP_01468533.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. BL107]
gi|116066669|gb|EAU72426.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. BL107]
Length = 528
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG+ R I E +V R M+ + D+ GI+ +G+++GE+ +NIA +GR
Sbjct: 432 VFADGELRITSIDEFPVNVSPSRHMLFTRHRDMPGIIGHLGSMMGEHNVNIASMQVGRKI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I +L+K++ I+
Sbjct: 492 VRGDAVMVLSIDDPIPAELLQKITAIDGIQEAHPVTL 528
>gi|17986632|ref|NP_539266.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 1 str.
16M]
gi|17982247|gb|AAL51530.1| d-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 1 str.
16M]
Length = 538
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G M+ + N D+ G++ +G I G++ +NIA+F LGR
Sbjct: 438 FSDGKPRFIQIKGINLDAEVGPHMLYVTNKDVPGMIGLLGTICGKHDVNIANFALGRDHP 497
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D I + L++L IR EFNV
Sbjct: 498 GGDAIAMLYVDEQIPQAALDELMAQEAIRAATPLEFNV 535
>gi|254559246|ref|YP_003066341.1| phosphoglycerate dehydrogenase [Methylobacterium extorquens DM4]
gi|254266524|emb|CAX22288.1| phosphoglycerate dehydrogenase [Methylobacterium extorquens DM4]
Length = 535
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DGKPR I+I+ IN D LM+ + N D G V G +LGE G+N+A F +GR
Sbjct: 439 VFNDGKPRVIEIRGINIDAPFAPLMLYVRNHDRPGFVGSFGTVLGEAGVNLATFAMGREA 498
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+AI+F+ +D + VL+ + ++ V+ F
Sbjct: 499 EGGNAIAFVAVDAEVSPEVLKAIEAIPQVKRVRPVRF 535
>gi|240137235|ref|YP_002961704.1| phosphoglycerate dehydrogenase [Methylobacterium extorquens AM1]
gi|240007201|gb|ACS38427.1| phosphoglycerate dehydrogenase [Methylobacterium extorquens AM1]
Length = 535
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DGKPR I+I+ IN D LM+ + N D G V G +LGE G+N+A F +GR
Sbjct: 439 VFNDGKPRVIEIRGINIDAPFAPLMLYVRNHDRPGFVGSFGTVLGEAGVNLATFAMGREA 498
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+AI+F+ +D + VL+ + ++ V+ F
Sbjct: 499 EGGNAIAFVAVDAEVSPEVLKAIEAIPQVKRVRPVRF 535
>gi|90425581|ref|YP_533951.1| D-3-phosphoglycerate dehydrogenase [Rhodopseudomonas palustris
BisB18]
gi|90107595|gb|ABD89632.1| D-3-phosphoglycerate dehydrogenase [Rhodopseudomonas palustris
BisB18]
Length = 529
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 54/97 (55%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG PR + I+ I D + G+ MI + N D G + ++LG+ INIA F+LGR +
Sbjct: 433 VFADGHPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGKFASLLGDAKINIATFNLGRHE 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +DG++ V+ K+ ++ K F
Sbjct: 493 LGGDAIALVEVDGAVPAEVIAKVQALPQVKQAKALVF 529
>gi|171909940|ref|ZP_02925410.1| D-3-phosphoglycerate dehydrogenase [Verrucomicrobium spinosum DSM
4136]
Length = 534
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 46/91 (50%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F G PR +KI + ++ + N D G++ G ILG++ +NIA+ L R++
Sbjct: 437 FFGGDPRIVKINGRRVEAKPEGTLLLLENDDRPGMIGAYGTILGQHQVNIANMSLSRNEE 496
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A++ L +D + + V++ L ++ V
Sbjct: 497 GGTAMTLLTLDTAPADVVIKDLETIPGVKRV 527
>gi|85705886|ref|ZP_01036982.1| D-3-phosphoglycerate dehydrogenase [Roseovarius sp. 217]
gi|85669474|gb|EAQ24339.1| D-3-phosphoglycerate dehydrogenase [Roseovarius sp. 217]
Length = 531
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 64/99 (64%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IGR M+ N D+ GI+ +G +GE G+NIA+F LGRS
Sbjct: 432 VFSDGKPRFIQIKGINIDAEIGRHMLYTTNEDVPGIIGTLGMTMGENGVNIANFTLGRSD 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + + ++ L + +++ +F+V
Sbjct: 492 AGGEAIALLYVDAPVPEAAIKALHATGKFQQIRELKFDV 530
>gi|56420782|ref|YP_148100.1| D-3-phosphoglycerate dehydrogenase [Geobacillus kaustophilus
HTA426]
gi|56380624|dbj|BAD76532.1| phosphoglycerate dehydrogenase [Geobacillus kaustophilus HTA426]
Length = 510
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 45/89 (50%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R + + D ++ I + D G++ VGN+LG + +NIA +GR ++ A+
Sbjct: 421 RIVHFDGVAIDFAPEGHLLYIQHQDRPGMIGKVGNVLGAHDVNIATMQVGRQEAGGKAMM 480
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
L +D + + VL+ L+ I VK+ E
Sbjct: 481 ILSLDKPVDDEVLQALAQIDDIETVKRLE 509
>gi|114704945|ref|ZP_01437853.1| phosphoglycerate dehydrogenase [Fulvimarina pelagi HTCC2506]
gi|114539730|gb|EAU42850.1| phosphoglycerate dehydrogenase [Fulvimarina pelagi HTCC2506]
Length = 532
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 39/98 (39%), Positives = 60/98 (61%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IG M+ N D GI+ +G + G+ G+NIA+F LGR++
Sbjct: 432 VFSDGKPRFIQIKGINIDAEIGEHMVYTTNNDAPGIIGLLGTVFGKAGVNIANFQLGRNR 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
AI+ L +D ++ VL+++ + I F+
Sbjct: 492 PGGDAIALLYVDSAVPEGVLDQVRDHKEIHRAVALRFD 529
>gi|163850102|ref|YP_001638145.1| D-3-phosphoglycerate dehydrogenase [Methylobacterium extorquens
PA1]
gi|163661707|gb|ABY29074.1| D-3-phosphoglycerate dehydrogenase [Methylobacterium extorquens
PA1]
Length = 535
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DGKPR I+I+ IN D LM+ + N D G V G +LGE G+N+A F +GR
Sbjct: 439 VFNDGKPRVIEIRGINIDAPFAPLMLYVRNHDRPGFVGSFGTVLGEAGVNLATFAMGREA 498
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+AI+F+ +D + VL+ + ++ V+ F
Sbjct: 499 EGGNAIAFVAVDAEVSPEVLKAIEAIPQVKRVRPVRF 535
>gi|153008560|ref|YP_001369775.1| D-3-phosphoglycerate dehydrogenase [Ochrobactrum anthropi ATCC
49188]
gi|151560448|gb|ABS13946.1| D-3-phosphoglycerate dehydrogenase [Ochrobactrum anthropi ATCC
49188]
Length = 533
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 60/98 (61%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGK RFI+I+ IN D ++G M+ + N D+ G++ +G I G++ INIA+F LGR
Sbjct: 433 FSDGKARFIQIKGINLDAEVGPHMLYVTNKDVPGMIGLLGTICGKHNINIANFSLGRDHP 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D I + L++L+ I+ EFNV
Sbjct: 493 GGDAIAMLYVDEQIPQAALDELTAQEAIKAATPLEFNV 530
>gi|312110403|ref|YP_003988719.1| D-3-phosphoglycerate dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|311215504|gb|ADP74108.1| D-3-phosphoglycerate dehydrogenase [Geobacillus sp. Y4.1MC1]
Length = 524
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 47/89 (52%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R + D ++ I + D G++ VGNILGE+ INIA +GR Q+ AI
Sbjct: 435 RIVHFDGFTIDFAPEGHLLYIQHQDRPGMIGKVGNILGEHQINIATMQVGRQQAGGKAIM 494
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
L +D I +++L+KL+ I VK+ E
Sbjct: 495 MLSLDKPIDDALLQKLTEIEDIETVKRVE 523
>gi|218528706|ref|YP_002419522.1| D-3-phosphoglycerate dehydrogenase [Methylobacterium
chloromethanicum CM4]
gi|218521009|gb|ACK81594.1| D-3-phosphoglycerate dehydrogenase [Methylobacterium
chloromethanicum CM4]
Length = 535
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DGKPR I+I+ IN D LM+ + N D G V G +LGE G+N+A F +GR
Sbjct: 439 VFNDGKPRVIEIRGINIDAPFAPLMLYVRNHDRPGFVGSFGTVLGEAGVNLATFAMGREA 498
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+AI+F+ +D + VL+ + ++ V+ F
Sbjct: 499 EGGNAIAFVAVDAEVSPEVLKAIEAIPQVKRVRPVRF 535
>gi|225853142|ref|YP_002733375.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis ATCC 23457]
gi|256045296|ref|ZP_05448190.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 1 str.
Rev.1]
gi|256263367|ref|ZP_05465899.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 2 str.
63/9]
gi|260565812|ref|ZP_05836295.1| aspartyl/glutamyl tRNA amidotransferase subunit C [Brucella
melitensis bv. 1 str. 16M]
gi|265991722|ref|ZP_06104279.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 1 str.
Rev.1]
gi|225641507|gb|ACO01421.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis ATCC 23457]
gi|260151185|gb|EEW86280.1| aspartyl/glutamyl tRNA amidotransferase subunit C [Brucella
melitensis bv. 1 str. 16M]
gi|263002678|gb|EEZ15081.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093365|gb|EEZ17434.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 2 str.
63/9]
gi|326409698|gb|ADZ66763.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis M28]
gi|326539406|gb|ADZ87621.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis M5-90]
Length = 533
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G M+ + N D+ G++ +G I G++ +NIA+F LGR
Sbjct: 433 FSDGKPRFIQIKGINLDAEVGPHMLYVTNKDVPGMIGLLGTICGKHDVNIANFALGRDHP 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D I + L++L IR EFNV
Sbjct: 493 GGDAIAMLYVDEQIPQAALDELMAQEAIRAATPLEFNV 530
>gi|149186566|ref|ZP_01864878.1| phosphoglycerate dehydrogenase [Erythrobacter sp. SD-21]
gi|148829793|gb|EDL48232.1| phosphoglycerate dehydrogenase [Erythrobacter sp. SD-21]
Length = 537
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 51/97 (52%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F PR ++I + + ++ M+ IVN D G + +G++LGE GINI F+LGR
Sbjct: 441 LFGADAPRLVEIFGVRIEAELDGHMLYIVNEDAPGFIGRIGSLLGENGINIGTFNLGRRA 500
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D I N V++K ++ V F
Sbjct: 501 AGGEAVLLLSVDQPIPNEVVKKACALEGVKTVMPLAF 537
>gi|258511215|ref|YP_003184649.1| D-3-phosphoglycerate dehydrogenase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257477941|gb|ACV58260.1| D-3-phosphoglycerate dehydrogenase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 529
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 50/97 (51%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V + PR +++ D I ++I + D G++ +G +LG+ INIA +GR +
Sbjct: 433 VLGEYGPRIVELDGYPIDTPIQGILIYTRHEDRPGMIGRIGTLLGDRDINIAGMQVGRRE 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D + V+++++ + IR V+ E
Sbjct: 493 TGGEAVMLLSVDKRVPQDVIDEIAKHPGIRLVRAIEL 529
>gi|15614165|ref|NP_242468.1| D-3-phosphoglycerate dehydrogenase [Bacillus halodurans C-125]
gi|10174219|dbj|BAB05321.1| D-3-phosphoglycerate dehydrogenase [Bacillus halodurans C-125]
Length = 540
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 43/91 (47%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
PR +KI N D +I I + D G++ +G +L E+ +NIA +GR + AI
Sbjct: 450 PRIVKINGFNVDFVPEGHLIYIQHNDRPGVIGKMGQLLAEHNVNIATMQVGRQEEGGDAI 509
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ +D + V+E L I F + E
Sbjct: 510 MMVAVDKVATDEVIEALKAVDEIHFADRIEL 540
>gi|222149645|ref|YP_002550602.1| D-3-phosphoglycerate dehydrogenase [Agrobacterium vitis S4]
gi|221736627|gb|ACM37590.1| D-3-phosphoglycerate dehydrogenase [Agrobacterium vitis S4]
Length = 531
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 46/100 (46%), Positives = 67/100 (67%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G MI I N D+ G++ F+G LG G+NIA+F LGR +
Sbjct: 432 VFSDGKPRFIQIKGINLDADVGPHMIYISNTDVPGMIGFMGTTLGNAGVNIANFQLGREK 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
+ AI+ L +DG + +VL++L+ N I+ + F V+
Sbjct: 492 ESGDAIALLYVDGPVEQTVLDQLTANAAIKQARLLTFAVE 531
>gi|256114254|ref|ZP_05454999.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 3 str.
Ether]
gi|265995559|ref|ZP_06108116.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 3 str.
Ether]
gi|262766843|gb|EEZ12461.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 3 str.
Ether]
Length = 533
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G M+ + N D+ G++ +G I G++ +NIA+F LGR
Sbjct: 433 FSDGKPRFIQIKGINLDAEVGPHMLYVTNKDVPGMIGLLGTICGKHDVNIANFALGRDHP 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D I + L++L IR EFNV
Sbjct: 493 GGDAIAMLYVDEQIPQAALDELMAQEAIRAATPLEFNV 530
>gi|261417914|ref|YP_003251596.1| D-3-phosphoglycerate dehydrogenase [Geobacillus sp. Y412MC61]
gi|297529583|ref|YP_003670858.1| D-3-phosphoglycerate dehydrogenase [Geobacillus sp. C56-T3]
gi|319767274|ref|YP_004132775.1| D-3-phosphoglycerate dehydrogenase [Geobacillus sp. Y412MC52]
gi|261374371|gb|ACX77114.1| D-3-phosphoglycerate dehydrogenase [Geobacillus sp. Y412MC61]
gi|297252835|gb|ADI26281.1| D-3-phosphoglycerate dehydrogenase [Geobacillus sp. C56-T3]
gi|317112140|gb|ADU94632.1| D-3-phosphoglycerate dehydrogenase [Geobacillus sp. Y412MC52]
Length = 524
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 45/89 (50%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R + + D ++ I + D G++ VGN+LG + +NIA +GR ++ A+
Sbjct: 435 RIVHFDGVAIDFAPEGHLLYIQHQDRPGMIGKVGNVLGAHDVNIATMQVGRQEAGGKAMM 494
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
L +D + + VL+ L+ I VK+ E
Sbjct: 495 ILSLDKPVDDEVLQALAQIDDIETVKRLE 523
>gi|148253350|ref|YP_001237935.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizobium sp. BTAi1]
gi|146405523|gb|ABQ34029.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizobium sp. BTAi1]
Length = 529
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V++DGKPR + I+ I D + G+ MI + N D G + ++LG+ INIA FHLGR
Sbjct: 433 VYADGKPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGKFASLLGDAKINIATFHLGRVA 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ AI+ + IDG++ +L K+ ++ K F
Sbjct: 493 AGSDAIALVEIDGAVPAELLAKIQALPQVKQAKALTF 529
>gi|78184104|ref|YP_376539.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. CC9902]
gi|78168398|gb|ABB25495.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. CC9902]
Length = 528
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG+ R I E +V R M+ + D+ GI+ +G+++GE+ +NIA +GR
Sbjct: 432 VFADGELRITSIDEYPVNVSPSRHMLFTRHRDMPGIIGHLGSMMGEHNVNIASMQVGRKI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I +L+K++ I+
Sbjct: 492 VRGDAVMVLSIDDPIPADLLQKITAIDGIQEAHPVTL 528
>gi|196248716|ref|ZP_03147416.1| amino acid-binding ACT domain protein [Geobacillus sp. G11MC16]
gi|196211592|gb|EDY06351.1| amino acid-binding ACT domain protein [Geobacillus sp. G11MC16]
Length = 310
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R + + D ++ I + D G++ VGNILG + +NIA +GR ++ A+
Sbjct: 221 RIVHFDGVAIDFAPEGHLLYIQHQDRPGMIGKVGNILGAHDVNIATMQVGRQEAGGKAMM 280
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
L +D + ++VL+ L+ I VK+ E
Sbjct: 281 ILSLDKPVDDAVLKTLAQIDDIETVKRLE 309
>gi|146342773|ref|YP_001207821.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizobium sp. ORS278]
gi|146195579|emb|CAL79606.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizobium sp. ORS278]
Length = 529
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 54/97 (55%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V++DGKPR + I+ I D + G+ MI + N D G + ++LG+ INIA FHLGR
Sbjct: 433 VYADGKPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGKFASLLGDAKINIATFHLGRVA 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +DG++ +L K+ ++ K F
Sbjct: 493 PGSDAIALVEVDGAVPAELLAKIQALPQVKQAKALAF 529
>gi|328950683|ref|YP_004368018.1| D-3-phosphoglycerate dehydrogenase [Marinithermus hydrothermalis
DSM 14884]
gi|328451007|gb|AEB11908.1| D-3-phosphoglycerate dehydrogenase [Marinithermus hydrothermalis
DSM 14884]
Length = 521
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+PR + I + +V ++ VN D G+V VG +LGE G+NIA LGR
Sbjct: 428 GSQPRLVGIDDYPLEVVPEGHLLVCVNHDRPGVVGRVGTLLGEAGVNIAGMQLGRDAPGG 487
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D VLE L+ + V E
Sbjct: 488 RALFVLTVDERPSPEVLEALARLEVLERVDVVEL 521
>gi|295398990|ref|ZP_06808972.1| D-3-phosphoglycerate dehydrogenase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294978456|gb|EFG54052.1| D-3-phosphoglycerate dehydrogenase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 524
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 47/89 (52%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R + D ++ I + D G++ VGNILGE+ INIA +GR Q+ AI
Sbjct: 435 RIVHFDGFTIDFAPEGHLLYIQHQDRPGMIGKVGNILGEHQINIATMQVGRQQAGGKAIM 494
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
L +D I +++L+KL+ I VK+ E
Sbjct: 495 MLSLDKPIDDTLLQKLTEIEDIETVKRVE 523
>gi|217977921|ref|YP_002362068.1| D-3-phosphoglycerate dehydrogenase [Methylocella silvestris BL2]
gi|217503297|gb|ACK50706.1| D-3-phosphoglycerate dehydrogenase [Methylocella silvestris BL2]
Length = 531
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 51/97 (52%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF GKPR I + I D + +MI + N D G V +ILG G+NIA F LGR +
Sbjct: 432 VFHAGKPRIISVNGIEVDAVVAPVMIYVSNDDKPGFVGRFTSILGAAGLNIATFALGRDR 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ + +DG++ + VL + +R VK F
Sbjct: 492 EGGSAVALIAVDGAVPDEVLADIRAAPGVREVKALHF 528
>gi|90418985|ref|ZP_01226896.1| D-3-phosphoglycerate dehydrogenase [Aurantimonas manganoxydans
SI85-9A1]
gi|90337065|gb|EAS50770.1| D-3-phosphoglycerate dehydrogenase [Aurantimonas manganoxydans
SI85-9A1]
Length = 535
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 39/99 (39%), Positives = 59/99 (59%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D ++G+ M+ N D GI+ +G G G+NIA+F LGR++
Sbjct: 432 VFSDGKPRFIQIKGINLDAEVGQHMVYTTNNDAPGIIGLLGTTFGAAGVNIANFQLGRNR 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D + +L+ + + I K F+V
Sbjct: 492 PGGDAIALLYLDSPMPEDLLKTVLSHKEIISAKPLRFDV 530
>gi|159045858|ref|YP_001534652.1| D-3-phosphoglycerate dehydrogenase [Dinoroseobacter shibae DFL 12]
gi|157913618|gb|ABV95051.1| D-3-phosphoglycerate dehydrogenase [Dinoroseobacter shibae DFL 12]
Length = 531
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 62/99 (62%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IG M+ N D G++ +G ILGE +NIA+F LGR++
Sbjct: 432 VFSDGKPRFIQIKGINIDAEIGEHMLYTTNKDTPGMIGTLGGILGENQVNIANFTLGRNE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + V +KL + V+ +FNV
Sbjct: 492 TNGDAIAMLYLDAPLPRDVQDKLIATGLFQQVRPLQFNV 530
>gi|218289859|ref|ZP_03494049.1| D-3-phosphoglycerate dehydrogenase [Alicyclobacillus acidocaldarius
LAA1]
gi|218239999|gb|EED07185.1| D-3-phosphoglycerate dehydrogenase [Alicyclobacillus acidocaldarius
LAA1]
Length = 529
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 51/97 (52%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V + PR +++ D I ++I + D G++ +G +LG+ INIA +GR +
Sbjct: 433 VLGEYGPRIVELDGYPIDTPIQGILIYTRHEDRPGMIGRIGTLLGDRDINIAGMQVGRRE 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D S+ V+++++ + IR V+ E
Sbjct: 493 TGGEAVMLLSVDKSVPQDVIDEIAKHPGIRLVRSIEL 529
>gi|316935825|ref|YP_004110807.1| D-3-phosphoglycerate dehydrogenase [Rhodopseudomonas palustris
DX-1]
gi|315603539|gb|ADU46074.1| D-3-phosphoglycerate dehydrogenase [Rhodopseudomonas palustris
DX-1]
Length = 529
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 53/97 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V++DGKPR + I+ I D + G MI + N D G + ++LG+ +NIA F+LGR
Sbjct: 433 VYADGKPRLVDIKGIRVDAEFGASMIYVTNEDKPGFIGKFASLLGDAKVNIATFNLGRHS 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + IDG VLEK+ ++ VK F
Sbjct: 493 QGGDAIALVEIDGPAPAEVLEKVQALPPVKQVKALTF 529
>gi|85715274|ref|ZP_01046257.1| D-3-phosphoglycerate dehydrogenase [Nitrobacter sp. Nb-311A]
gi|85697920|gb|EAQ35794.1| D-3-phosphoglycerate dehydrogenase [Nitrobacter sp. Nb-311A]
Length = 549
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V++DG PR + I+ I D + G+ MI + N D G + ++LG+ G+NIA F+LGR
Sbjct: 453 VYADGHPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGRFASLLGDAGLNIATFNLGRHS 512
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +DGS+ +VL K+ ++ K F
Sbjct: 513 QGGDAIALVEVDGSVPENVLAKVQALPQVKQAKALTF 549
>gi|237816063|ref|ZP_04595059.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus str. 2308 A]
gi|237788726|gb|EEP62938.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus str. 2308 A]
Length = 538
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G M+ + N D+ G++ +G I G++ +NIA+F LGR
Sbjct: 438 FSDGKPRFIQIKGINLDAEVGPHMLYVTNKDVPGMIGLLGTICGKHDVNIANFALGRDHP 497
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D I + L++L IR EFNV
Sbjct: 498 GGDAIAMLYVDEQIPQAALDELMAQEAIRVATPLEFNV 535
>gi|163796990|ref|ZP_02190946.1| Phosphoglycerate dehydrogenase and related dehydrogenase [alpha
proteobacterium BAL199]
gi|159177737|gb|EDP62288.1| Phosphoglycerate dehydrogenase and related dehydrogenase [alpha
proteobacterium BAL199]
Length = 525
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 51/95 (53%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
KPR +++Q I + D GR M+ + N D G + +G+ LG +G+NIA FHLGR
Sbjct: 431 GGTKPRLVEVQGIAIEADFGRHMLYVRNYDKPGFIGALGSALGNHGVNIATFHLGRRDVG 490
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +D +I ++L ++ + V F
Sbjct: 491 GEAIALVEVDQAIDAALLTEVQSLPHVVRVNALSF 525
>gi|33865069|ref|NP_896628.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. WH 8102]
gi|33638753|emb|CAE07048.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Synechococcus
sp. WH 8102]
Length = 528
Score = 113 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG+ R I E +V M+ + D+ GI+ +G++LGE+ +NIA +GR
Sbjct: 432 VFADGELRITSIDEFPVNVTPSSHMLFTRHRDMPGIIGQLGSMLGEHNVNIAAMQVGRKI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I ++L+ ++ I+
Sbjct: 492 VRGDAVMVLSIDDPIPAALLQTITAIEGIQEAHPVSL 528
>gi|163745024|ref|ZP_02152384.1| D-3-phosphoglycerate dehydrogenase [Oceanibulbus indolifex HEL-45]
gi|161381842|gb|EDQ06251.1| D-3-phosphoglycerate dehydrogenase [Oceanibulbus indolifex HEL-45]
Length = 531
Score = 113 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 62/99 (62%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ I D +IG M+ N D+ GI+ +G +GE G+NIA+F LGR+
Sbjct: 432 VFSDGKPRFIQIKGITIDAEIGEHMLYTTNEDVPGIIGTLGQTMGENGVNIANFTLGRNT 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + +V+ KL R +K +F+V
Sbjct: 492 AKGEAIALLYVDDQVPEAVIGKLRDTGMFRQIKPLQFDV 530
>gi|296284464|ref|ZP_06862462.1| D-3-phosphoglycerate dehydrogenase [Citromicrobium bathyomarinum
JL354]
Length = 528
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 51/97 (52%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F PR ++I I + ++ MI +VN D G + +G++LG GINI F+LGR Q
Sbjct: 432 LFGREAPRLVEIFGIGIEAELDGHMIYVVNDDAPGFIGRIGSLLGNRGINIGTFNLGRKQ 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D + ++++ + +R V F
Sbjct: 492 AGGEAVLLLSLDQPVDDALIAEAEALEGVRTVTALSF 528
>gi|254436982|ref|ZP_05050476.1| D-3-phosphoglycerate dehydrogenase [Octadecabacter antarcticus 307]
gi|198252428|gb|EDY76742.1| D-3-phosphoglycerate dehydrogenase [Octadecabacter antarcticus 307]
Length = 531
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 61/99 (61%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IG MI N D+ GI+ +G +G++ +NIA+F LGRS
Sbjct: 432 VFSDGKPRFIQIKGINIDAEIGAHMIYTTNEDVPGIIGTLGQTMGKHNVNIANFTLGRSA 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + + L++L VK F+V
Sbjct: 492 ANGEAIALLYVDEVVPAATLKELEATGMFTQVKPLTFDV 530
>gi|126733884|ref|ZP_01749631.1| D-3-phosphoglycerate dehydrogenase [Roseobacter sp. CCS2]
gi|126716750|gb|EBA13614.1| D-3-phosphoglycerate dehydrogenase [Roseobacter sp. CCS2]
Length = 530
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 58/99 (58%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IG M+ N D G++ +G LG +NIA+F LGRS+
Sbjct: 432 VFSDGKPRFIQIKGINIDAEIGEHMVYTTNEDRPGVIGTLGTTLGANNVNIANFTLGRSE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D I +E L + VK FNV
Sbjct: 492 AKGEAIALLYVDEPIPAQAIEALETTGLFQQVKPLTFNV 530
>gi|62290557|ref|YP_222350.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 1 str.
9-941]
gi|82700473|ref|YP_415047.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis biovar
Abortus 2308]
gi|189024778|ref|YP_001935546.1| SerA-1, D-3-phosphoglycerate dehydrogenase [Brucella abortus S19]
gi|254689854|ref|ZP_05153108.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 6 str.
870]
gi|254694347|ref|ZP_05156175.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 3 str.
Tulya]
gi|254698003|ref|ZP_05159831.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 2 str.
86/8/59]
gi|254730889|ref|ZP_05189467.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 4 str.
292]
gi|256258108|ref|ZP_05463644.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 9 str.
C68]
gi|260547197|ref|ZP_05822935.1| SerA family protein [Brucella abortus NCTC 8038]
gi|260755386|ref|ZP_05867734.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 6 str.
870]
gi|260758607|ref|ZP_05870955.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 4 str.
292]
gi|260762439|ref|ZP_05874776.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 2 str.
86/8/59]
gi|260884402|ref|ZP_05896016.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 9 str.
C68]
gi|261214655|ref|ZP_05928936.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 3 str.
Tulya]
gi|297248957|ref|ZP_06932665.1| phosphoglycerate dehydrogenase [Brucella abortus bv. 5 str. B3196]
gi|62196689|gb|AAX74989.1| SerA-1, D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 1
str. 9-941]
gi|82616574|emb|CAJ11653.1| ATP/GTP-binding site motif A (P-loop):Amino acid-binding
ACT:D-isomer specific 2-hydroxyacid dehydrogenase,
catalytic domain: [Brucella melitensis biovar Abortus
2308]
gi|189020350|gb|ACD73072.1| SerA-1, D-3-phosphoglycerate dehydrogenase [Brucella abortus S19]
gi|260095562|gb|EEW79440.1| SerA family protein [Brucella abortus NCTC 8038]
gi|260668925|gb|EEX55865.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 4 str.
292]
gi|260672865|gb|EEX59686.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 2 str.
86/8/59]
gi|260675494|gb|EEX62315.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 6 str.
870]
gi|260873930|gb|EEX80999.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 9 str.
C68]
gi|260916262|gb|EEX83123.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 3 str.
Tulya]
gi|297174090|gb|EFH33447.1| phosphoglycerate dehydrogenase [Brucella abortus bv. 5 str. B3196]
Length = 533
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G M+ + N D+ G++ +G I G++ +NIA+F LGR
Sbjct: 433 FSDGKPRFIQIKGINLDAEVGPHMLYVTNKDVPGMIGLLGTICGKHDVNIANFALGRDHP 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D I + L++L IR EFNV
Sbjct: 493 GGDAIAMLYVDEQIPQAALDELMAQEAIRVATPLEFNV 530
>gi|39937368|ref|NP_949644.1| D-3-phosphoglycerate dehydrogenase [Rhodopseudomonas palustris
CGA009]
gi|192293149|ref|YP_001993754.1| D-3-phosphoglycerate dehydrogenase [Rhodopseudomonas palustris
TIE-1]
gi|39651226|emb|CAE29749.1| putative phosphoglycerate dehydrogenase [Rhodopseudomonas palustris
CGA009]
gi|192286898|gb|ACF03279.1| D-3-phosphoglycerate dehydrogenase [Rhodopseudomonas palustris
TIE-1]
Length = 529
Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 53/97 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V++DGKPR + I+ I D + G MI + N D G + ++LG+ +NIA F+LGR
Sbjct: 433 VYADGKPRLVDIKGIRVDAEFGSSMIYVTNEDKPGFIGKFASLLGDAKVNIATFNLGRHT 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + IDG VLEK+ ++ VK F
Sbjct: 493 EGGDAIALVTIDGPAPTEVLEKVQALPQVKQVKALTF 529
>gi|319781038|ref|YP_004140514.1| D-3-phosphoglycerate dehydrogenase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166926|gb|ADV10464.1| D-3-phosphoglycerate dehydrogenase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 533
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 66/99 (66%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G+ M+ NAD GI+ +G + GE G+NIA+F LGR++
Sbjct: 433 FSDGKPRFIQIKGINLDAEVGQHMLYTTNADAPGIIGLLGTVCGENGVNIANFQLGRNRP 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +D +VLEK+ + +I K+ +F+V+
Sbjct: 493 GGDAIALLYLDAPFPEAVLEKVKAHKSIDSAKRLQFDVN 531
>gi|61612115|gb|AAX47292.1| 3-phosphoglycerate dehydrogenase [Mesorhizobium ciceri]
Length = 533
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 66/99 (66%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G+ M+ NAD GI+ +G + GE G+NIA+F LGR++
Sbjct: 433 FSDGKPRFIQIKGINLDAEVGQHMLYTTNADAPGIIGLLGTVCGENGVNIANFQLGRNRP 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +D +VLEK+ + +I K+ +F+V+
Sbjct: 493 GGDAIALLYLDAPFPEAVLEKVKAHKSIDSAKRLQFDVN 531
>gi|239827548|ref|YP_002950172.1| D-3-phosphoglycerate dehydrogenase [Geobacillus sp. WCH70]
gi|239807841|gb|ACS24906.1| D-3-phosphoglycerate dehydrogenase [Geobacillus sp. WCH70]
Length = 525
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 47/89 (52%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R + D ++ I + D G++ VGN+LGE+ +NIA +GR Q+ AI
Sbjct: 435 RIVHFDGFTIDFAPDGHLLYIQHQDRPGMIGKVGNVLGEHQVNIATMQVGREQAGGKAIM 494
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
L +D I +++L+KL+ I VK+ E
Sbjct: 495 MLSLDKPIDDALLQKLAEIEDIETVKRLE 523
>gi|288556042|ref|YP_003427977.1| D-3-phosphoglycerate dehydrogenase [Bacillus pseudofirmus OF4]
gi|288547202|gb|ADC51085.1| D-3-phosphoglycerate dehydrogenase [Bacillus pseudofirmus OF4]
Length = 540
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
R + I N D ++ I + D G++ +G +L E+ +NIA +GR Q AI
Sbjct: 450 ARIVSINGFNVDFVPQGHLLYIQHNDKPGVIGRIGQLLAEHDVNIATMQVGRKQEGGEAI 509
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ +D ++ VL+ + I+F + E
Sbjct: 510 MMITVDKTVEEDVLKAVRKIEDIQFADKIE 539
>gi|285808609|gb|ADC36128.1| putative D-3-phosphoglycerate dehydrogenase [uncultured bacterium
253]
Length = 533
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 1 VFSDGKP----RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL 56
+F G+ R +I + + M+ + N D+ G++ VG ILGE+ +NI+ FHL
Sbjct: 432 IFGFGEQAREGRITEIDGFHIEAIPRGHMLVMRNRDVPGVIGRVGTILGEHDVNISRFHL 491
Query: 57 GRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
GR + A++ + +D ++ L L I V++ E
Sbjct: 492 GRRERGGEAMAVIEVDSTVAPKALAALRSQEEILLVREIEL 532
>gi|91978368|ref|YP_571027.1| D-3-phosphoglycerate dehydrogenase [Rhodopseudomonas palustris
BisB5]
gi|91684824|gb|ABE41126.1| D-3-phosphoglycerate dehydrogenase [Rhodopseudomonas palustris
BisB5]
Length = 529
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 53/97 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V++DGKPR + I+ I D + G+ MI + N D G + ++LG+ +NIA F+LGR
Sbjct: 433 VYADGKPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGKFASLLGDAKVNIATFNLGRHS 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +DG + V+ ++ ++ K F
Sbjct: 493 QGGDAIALVEVDGPVPAEVIAQVQALPPVKQAKALVF 529
>gi|138895825|ref|YP_001126278.1| D-3-phosphoglycerate dehydrogenase [Geobacillus thermodenitrificans
NG80-2]
gi|134267338|gb|ABO67533.1| D-3-phosphoglycerate dehydrogenase [Geobacillus thermodenitrificans
NG80-2]
Length = 465
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R + + D ++ I + D G++ VGNILG + +NIA +GR ++ A+
Sbjct: 376 RIVHFDGVAIDFAPEGHLLYIQHQDRPGMIGKVGNILGAHDVNIATMQVGRQEAGGKAMM 435
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
L +D + ++VL+ L+ I VK+ E
Sbjct: 436 ILSLDKPVDDAVLKTLAQIDDIETVKRLE 464
>gi|126724751|ref|ZP_01740594.1| D-3-phosphoglycerate dehydrogenase [Rhodobacterales bacterium
HTCC2150]
gi|126705915|gb|EBA05005.1| D-3-phosphoglycerate dehydrogenase [Rhodobacterales bacterium
HTCC2150]
Length = 530
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 60/99 (60%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IG M+ N D+ GI+ +G +G G+NIA+F LGRS+
Sbjct: 432 VFSDGKPRFIQIKGINIDAEIGAHMLYTTNEDVPGIIGTLGQTMGGNGVNIANFTLGRSE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D +I +L +L + V F+V
Sbjct: 492 VGGEAIALLYVDSAIPAPILAELKTTGMFQSVNPLRFDV 530
>gi|115526154|ref|YP_783065.1| D-3-phosphoglycerate dehydrogenase [Rhodopseudomonas palustris
BisA53]
gi|115520101|gb|ABJ08085.1| D-3-phosphoglycerate dehydrogenase [Rhodopseudomonas palustris
BisA53]
Length = 530
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG PR + I+ I D + G+ MI + N D G + ++LG+ INIA F+LGR
Sbjct: 434 VFADGHPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGKFASLLGDAKINIATFNLGRHS 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +DG++ +L K+ ++ K F
Sbjct: 494 QGGDAIALVEVDGAVPTELLAKVQSLPQVKQAKALVF 530
>gi|322368216|ref|ZP_08042785.1| D-3-phosphoglycerate dehydrogenase [Haladaptatus paucihalophilus
DX253]
gi|320552232|gb|EFW93877.1| D-3-phosphoglycerate dehydrogenase [Haladaptatus paucihalophilus
DX253]
Length = 527
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 43/98 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+D PR ++I D M+ N D G++ F+G +LGE+ NIA R
Sbjct: 428 LFADDDPRIVRIDGYRVDAIPHGHMLVARNQDKPGVIGFIGTVLGEHDTNIAGMFNARET 487
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A+S +D + + E L + I V+ N
Sbjct: 488 DGGEALSVYNLDSEVSTAAKEALEADERIIEVRNIALN 525
>gi|31790358|gb|AAP58615.1| putative D-3-phosphoglycerate dehydrogenase [uncultured
Acidobacteria bacterium]
Length = 561
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 1 VFSDGKP----RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL 56
+F G+ R +I + + M+ + N D+ G++ VG ILGE G+NI+HFHL
Sbjct: 460 IFGFGEQAREGRITEIDGFHIEALPHGHMLVMRNRDVPGVIGRVGTILGERGVNISHFHL 519
Query: 57 GRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
GR + A++ + +D + L+ L I V E
Sbjct: 520 GRRERGGEAMAVIEVDAAADAETLDALRSLQDILSVCVIEL 560
>gi|85707813|ref|ZP_01038879.1| phosphoglycerate dehydrogenase [Erythrobacter sp. NAP1]
gi|85689347|gb|EAQ29350.1| phosphoglycerate dehydrogenase [Erythrobacter sp. NAP1]
Length = 534
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F PR ++I I + D+ M+ +VN D G + +G +LG GINI F+LGR
Sbjct: 438 LFGKDAPRLVEIFGIGIEADLDGNMLYVVNDDKPGFIGRIGTLLGSQGINIGTFNLGRRD 497
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D V+ + ++ VK F
Sbjct: 498 AGGEAVLLLSLDDEPSADVMAEAEKVEGVKMVKALSF 534
>gi|83855133|ref|ZP_00948663.1| D-3-phosphoglycerate dehydrogenase [Sulfitobacter sp. NAS-14.1]
gi|83842976|gb|EAP82143.1| D-3-phosphoglycerate dehydrogenase [Sulfitobacter sp. NAS-14.1]
Length = 531
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 60/99 (60%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN + ++G M+ N D+ GI+ +G LG +NIA+F LGRS
Sbjct: 432 VFSDGKPRFIQIKGINIEAEVGAHMLYTTNNDVPGIIGTLGQTLGANDVNIANFTLGRST 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L IDG + L+ L + VK+ EF V
Sbjct: 492 AKGEAIALLYIDGPLPEKALKDLRDTGLFKQVKELEFEV 530
>gi|83941656|ref|ZP_00954118.1| D-3-phosphoglycerate dehydrogenase [Sulfitobacter sp. EE-36]
gi|83847476|gb|EAP85351.1| D-3-phosphoglycerate dehydrogenase [Sulfitobacter sp. EE-36]
Length = 531
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 60/99 (60%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN + ++G M+ N D+ GI+ +G LG +NIA+F LGRS
Sbjct: 432 VFSDGKPRFIQIKGINIEAEVGAHMLYTTNNDVPGIIGTLGQTLGANDVNIANFTLGRST 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L IDG + L+ L + VK+ EF V
Sbjct: 492 AKGEAIALLYIDGPLPEKALKDLRDTGLFKQVKELEFEV 530
>gi|86748440|ref|YP_484936.1| D-3-phosphoglycerate dehydrogenase [Rhodopseudomonas palustris
HaA2]
gi|86571468|gb|ABD06025.1| D-3-phosphoglycerate dehydrogenase [Rhodopseudomonas palustris
HaA2]
Length = 529
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V++DGKPR + I+ I D + G+ MI + N D G + ++LG+ +NIA F+LGR
Sbjct: 433 VYADGKPRLVDIKGIRVDAEFGQSMIYVTNEDKPGFIGKFASLLGDAKVNIATFNLGRHS 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + IDG V+ K+ ++ K F
Sbjct: 493 QGGDAIALVEIDGPAPADVIAKVQALPQVKQAKALAF 529
>gi|254509701|ref|ZP_05121768.1| phosphoglycerate dehydrogenase [Rhodobacteraceae bacterium KLH11]
gi|221533412|gb|EEE36400.1| phosphoglycerate dehydrogenase [Rhodobacteraceae bacterium KLH11]
Length = 531
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/99 (40%), Positives = 60/99 (60%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IG M+ N D+ GI+ +G +GE+ +NIA+F LGR++
Sbjct: 432 VFSDGKPRFIQIKGINIDAEIGAHMLYTTNEDVPGIIGVLGQTMGEHNVNIANFTLGRAE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + L+ +K EF+V
Sbjct: 492 AGGEAIALLYVDAPVPAEARAVLAETGLFTQIKPLEFDV 530
>gi|254477808|ref|ZP_05091194.1| phosphoglycerate dehydrogenase [Ruegeria sp. R11]
gi|214032051|gb|EEB72886.1| phosphoglycerate dehydrogenase [Ruegeria sp. R11]
Length = 531
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/99 (39%), Positives = 58/99 (58%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D ++G M+ N D+ GI+ +G +G+ +NIA+F LGRS
Sbjct: 432 VFSDGKPRFIQIKGINIDAEVGAHMLYTTNEDVPGIIGALGKTMGDNDVNIANFTLGRSD 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + KL+ +K F+V
Sbjct: 492 AGGEAIALLYVDEPVPAEARAKLAETGLFTQIKPLAFDV 530
>gi|188579907|ref|YP_001923352.1| D-3-phosphoglycerate dehydrogenase [Methylobacterium populi BJ001]
gi|179343405|gb|ACB78817.1| D-3-phosphoglycerate dehydrogenase [Methylobacterium populi BJ001]
Length = 535
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 55/97 (56%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DGKPR I+I+ I D LM+ + N D G V G++LG+ G+N+A F LGR
Sbjct: 439 VFNDGKPRVIEIRGIGIDAPFAPLMLYVRNHDKPGFVGSFGSVLGDAGVNLATFALGREA 498
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+AI+F+ +D + VL+ + ++ V+ F
Sbjct: 499 EGGNAIAFVAVDAEVSPEVLKAIETIPQVKRVRLVRF 535
>gi|148557578|ref|YP_001265160.1| D-3-phosphoglycerate dehydrogenase [Sphingomonas wittichii RW1]
gi|148502768|gb|ABQ71022.1| D-3-phosphoglycerate dehydrogenase [Sphingomonas wittichii RW1]
Length = 525
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 54/97 (55%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F++ +PR ++I + + D+G M+ IVN D G + +G+ LGE +NI FHLGR
Sbjct: 429 LFANAEPRLVEIYGVKVEADLGGTMLYIVNVDAPGFIGRLGSTLGEANVNIGTFHLGRRS 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D + +++ K++ ++ K F
Sbjct: 489 AGGEAVLLLSVDTPVDDALKAKIAQLPGVKTAKALSF 525
>gi|259417745|ref|ZP_05741664.1| phosphoglycerate dehydrogenase [Silicibacter sp. TrichCH4B]
gi|259346651|gb|EEW58465.1| phosphoglycerate dehydrogenase [Silicibacter sp. TrichCH4B]
Length = 531
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/99 (39%), Positives = 58/99 (58%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D ++G M+ N D+ GI+ +G LG+ +NIA+F LGR++
Sbjct: 432 VFSDGKPRFIQIKGINIDAEVGAHMLYTTNKDVPGIIGTLGQTLGDMDVNIANFTLGRNE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D + KL+ +K F+V
Sbjct: 492 VGGEAIALLYVDAEVPADARAKLAETGYFTQIKPLAFDV 530
>gi|99082861|ref|YP_615015.1| D-3-phosphoglycerate dehydrogenase [Ruegeria sp. TM1040]
gi|99039141|gb|ABF65753.1| D-3-phosphoglycerate dehydrogenase [Ruegeria sp. TM1040]
Length = 531
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/99 (39%), Positives = 58/99 (58%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D ++G M+ N D+ GI+ +G LG+ +NIA+F LGR++
Sbjct: 432 VFSDGKPRFIQIKGINIDAEVGAHMLYTTNQDVPGIIGTLGQTLGDMDVNIANFTLGRNE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D + KL+ +K F+V
Sbjct: 492 VGGEAIALLYVDAEVPADARAKLAETGYFTQIKPLAFDV 530
>gi|116073644|ref|ZP_01470906.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Synechococcus
sp. RS9916]
gi|116068949|gb|EAU74701.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Synechococcus
sp. RS9916]
Length = 528
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG+ R I E +V R M+ + D+ GI+ +G++LGE+ +NIA +GR
Sbjct: 432 VFADGELRVTTIDEFPVNVPPSRHMLFTRHRDMPGIIGQLGSVLGEHNVNIASMQVGRRI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I ++L ++ I+
Sbjct: 492 VRGDAVMVLSIDDPIPPTLLANINAIDGIQEAHPVTL 528
>gi|78213665|ref|YP_382444.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. CC9605]
gi|78198124|gb|ABB35889.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. CC9605]
Length = 528
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 45/97 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG R I +V M+ + D+ GI+ +G++LGE+ +NIA +GR
Sbjct: 432 VFADGDLRITSIDAFPVNVTPSSHMLFTRHRDMPGIIGHLGSLLGEHNVNIASMQVGRKI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I +L+ ++ I+
Sbjct: 492 VRGDAVMVLSIDDPIPADLLQTITAIDGIQEAHPVTL 528
>gi|206890990|ref|YP_002248773.1| D-3-phosphoglycerate dehydrogenase [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742928|gb|ACI21985.1| D-3-phosphoglycerate dehydrogenase [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 529
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 53/99 (53%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ S PR ++I +I+ ++ MI + N D G++ +G +LG+ INI H H GR +
Sbjct: 430 LLSRKDPRIVQINDISMEIIPEGNMIFLRNHDRPGVIGNIGTLLGQNNINIGHMHFGRKE 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ A S + +D ++ + ++EK+ + V+ +V
Sbjct: 490 AGGIAFSVISVDATLTDDIIEKIKQLPNVLEVRPVYISV 528
>gi|260434318|ref|ZP_05788288.1| phosphoglycerate dehydrogenase [Synechococcus sp. WH 8109]
gi|260412192|gb|EEX05488.1| phosphoglycerate dehydrogenase [Synechococcus sp. WH 8109]
Length = 528
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 45/97 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG R I +V M+ + D+ GI+ +G++LGE+ +NIA +GR
Sbjct: 432 VFADGDLRITSIDAFPVNVTPSSHMLFTRHRDMPGIIGHLGSLLGEHNVNIASMQVGRKI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I +L+ ++ I+
Sbjct: 492 VRGDAVMVLSIDDPIPADLLQTITAIDGIQEAHPVTL 528
>gi|110677605|ref|YP_680612.1| D-3-phosphoglycerate dehydrogenase [Roseobacter denitrificans OCh
114]
gi|109453721|gb|ABG29926.1| D-3-phosphoglycerate dehydrogenase [Roseobacter denitrificans OCh
114]
Length = 531
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 61/99 (61%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ I D ++G M+ N D+ GI+ +G +GE G+NIA+F LGR++
Sbjct: 432 VFSDGKPRFIQIKGIQIDAEVGAHMLYTTNEDVPGIIGTLGQTMGENGVNIANFTLGRAE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + V++KL VK F+V
Sbjct: 492 AKGEAIALLYVDDQVPAPVIKKLEKTGMFTQVKPLIFDV 530
>gi|148265877|ref|YP_001232583.1| D-3-phosphoglycerate dehydrogenase [Geobacter uraniireducens Rf4]
gi|146399377|gb|ABQ28010.1| D-3-phosphoglycerate dehydrogenase [Geobacter uraniireducens Rf4]
Length = 539
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G PR +++++ D M+ + D G++ +G ILG INIA +LGR +
Sbjct: 435 EGAPRIVRLRDYAMDFSPEGHMLLLNYIDRPGMIGRIGTILGTRDINIASMNLGRREKKG 494
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D ++ V+E+L F++
Sbjct: 495 EAMVILSLDSAVPPDVVEELRNATNATFIRPLNM 528
>gi|225174433|ref|ZP_03728432.1| D-3-phosphoglycerate dehydrogenase [Dethiobacter alkaliphilus AHT
1]
gi|225170218|gb|EEG79013.1| D-3-phosphoglycerate dehydrogenase [Dethiobacter alkaliphilus AHT
1]
Length = 525
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+ R +KI + N +V R M+ D+ G++ G LGE INIA +GR
Sbjct: 428 LFNKDDIRIVKIDKYNIEVVPSRYMLVTKYMDMPGVIGRFGITLGESNINIAGMQVGRQS 487
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A+ L +D + V++KL I ++ + +
Sbjct: 488 IGGEAVMALQVDCPVPEDVIKKLEKLDAIVSIRFVKLD 525
>gi|332188569|ref|ZP_08390288.1| phosphoglycerate dehydrogenase [Sphingomonas sp. S17]
gi|332011413|gb|EGI53499.1| phosphoglycerate dehydrogenase [Sphingomonas sp. S17]
Length = 516
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F D PR +++ I + D+ M+ +VN D G + +G LGE G+NI FHLGR
Sbjct: 420 LFGDQAPRLVELFGIKVEADLAGPMLYVVNEDAPGFIGRLGTTLGEAGVNIGTFHLGRRS 479
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D ++ +L K+ ++ F
Sbjct: 480 AGGEAVLLLSVDEAVDAELLAKVKSLPGVKTAMGLVF 516
>gi|254462167|ref|ZP_05075583.1| phosphoglycerate dehydrogenase [Rhodobacterales bacterium HTCC2083]
gi|206678756|gb|EDZ43243.1| phosphoglycerate dehydrogenase [Rhodobacteraceae bacterium
HTCC2083]
Length = 531
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 61/99 (61%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IG M+ N D+ GI+ +GN +G+ G+NIA+F LGR+
Sbjct: 432 VFSDGKPRFIQIKGINIDAEIGAHMLYTTNEDVPGIIGLLGNTMGKSGVNIANFTLGRAD 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D I VL+ L VK EF+V
Sbjct: 492 VGGEAIALLYVDNPIPADVLKTLDGTGMFSQVKPLEFDV 530
>gi|260467077|ref|ZP_05813257.1| D-3-phosphoglycerate dehydrogenase [Mesorhizobium opportunistum
WSM2075]
gi|259029186|gb|EEW30482.1| D-3-phosphoglycerate dehydrogenase [Mesorhizobium opportunistum
WSM2075]
Length = 533
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 42/98 (42%), Positives = 64/98 (65%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G+ M+ NAD GI+ +G + GE G+NIA+F LGR++
Sbjct: 433 FSDGKPRFIQIKGINLDAEVGQHMLYTTNADAPGIIGLLGTVCGENGVNIANFQLGRNRP 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D VLE++ + +I K+ +F+V
Sbjct: 493 GGDAIALLYLDAPFPEKVLEQVRAHKSIDSAKRLQFDV 530
>gi|15791207|ref|NP_281031.1| D-3-phosphoglycerate dehydrogenase [Halobacterium sp. NRC-1]
gi|169236963|ref|YP_001690163.1| D-3-phosphoglycerate dehydrogenase [Halobacterium salinarum R1]
gi|10581831|gb|AAG20511.1| phosphoglycerate dehydrogenase [Halobacterium sp. NRC-1]
gi|167728029|emb|CAP14817.1| phosphoglycerate dehydrogenase [Halobacterium salinarum R1]
Length = 527
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 43/98 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+ PR ++I + M+ N D G++ F+G +LG +NIA R
Sbjct: 428 LFAGDDPRLVEIDGFRVEAAPNGHMLVARNHDTPGVIGFIGGVLGTAEVNIAGMFNAREA 487
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A++ +D + L++L+ + I V E N
Sbjct: 488 RGGEALTVYNLDADVPARALDELAGDDRIVDVTSIELN 525
>gi|222481126|ref|YP_002567363.1| D-3-phosphoglycerate dehydrogenase [Halorubrum lacusprofundi ATCC
49239]
gi|222454028|gb|ACM58293.1| D-3-phosphoglycerate dehydrogenase [Halorubrum lacusprofundi ATCC
49239]
Length = 534
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 43/98 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+ R ++I D M+ N D G++ +G +LG+Y +NIA + R
Sbjct: 429 LFAGEDARIVRIDGFRVDAVPYGHMLVARNTDEPGVIGLIGTVLGDYDVNIAGMYNARET 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A++ +D + + +E L + I V + +
Sbjct: 489 QGGEALTVYNLDQDVPDEAIEALLADDRIVEVTEITLD 526
>gi|103486109|ref|YP_615670.1| D-3-phosphoglycerate dehydrogenase [Sphingopyxis alaskensis RB2256]
gi|98976186|gb|ABF52337.1| D-3-phosphoglycerate dehydrogenase [Sphingopyxis alaskensis RB2256]
Length = 528
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + +PR +++ I + D+ M+ IVN D G + +G+ LG+ G+NI FHLGR
Sbjct: 432 LFGNNEPRLVEMFGIKVEADLDGDMLYIVNEDAPGFIGRIGSTLGDAGLNIGTFHLGRRA 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D + +L ++ ++ VK +F
Sbjct: 492 AGGEAVLLLSLDSPMPEPLLWQVCQLPGVKMVKGLKF 528
>gi|212638896|ref|YP_002315416.1| D-3-phosphoglycerate dehydrogenase [Anoxybacillus flavithermus WK1]
gi|212560376|gb|ACJ33431.1| Phosphoglycerate dehydrogenase [Anoxybacillus flavithermus WK1]
Length = 549
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R + D ++ I + D G++ VGNILG++ +NIA +GR ++ AI
Sbjct: 435 RIVHFNGFAIDFAPEGHLLYIQHHDKPGMIGKVGNILGDHQVNIATMQVGRQEAGGKAIM 494
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D + ++++E L I VK+ E+
Sbjct: 495 MLSLDKPLDDALVETLEQISDIDVVKRLEY 524
>gi|302038732|ref|YP_003799054.1| d-3-phosphoglycerate dehydrogenase [Candidatus Nitrospira defluvii]
gi|300606796|emb|CBK43129.1| D-3-phosphoglycerate dehydrogenase [Candidatus Nitrospira defluvii]
Length = 530
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
++ PR I+I + +V ++ I N D G++ VG+ILG++ INIA R +
Sbjct: 430 LYHRKDPRIIEIDQFKVEVVPDNHLLLIQNEDRPGVIGTVGHILGDHNINIARMQCSREE 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
A+ +D + SVL++++ + I VK
Sbjct: 490 RGGKALQIFGLDAPLPKSVLDQITNSKHILSVKV 523
>gi|258517404|ref|YP_003193626.1| D-3-phosphoglycerate dehydrogenase [Desulfotomaculum acetoxidans
DSM 771]
gi|257781109|gb|ACV65003.1| D-3-phosphoglycerate dehydrogenase [Desulfotomaculum acetoxidans
DSM 771]
Length = 526
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 40/97 (41%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + I DV M+ + + D I+ VG ++GE+ INIA +GR +
Sbjct: 430 LLQGNVAHLVNIDGYRVDVVPSGHMLVVPHYDRPKIIGKVGTLIGEHDINIAAMQVGRKE 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID + + L ++ I VK
Sbjct: 490 IGGKAVMVLTIDDVVPDDTLRAIAQVDGILDVKFVSL 526
>gi|126732689|ref|ZP_01748485.1| D-3-phosphoglycerate dehydrogenase [Sagittula stellata E-37]
gi|126706819|gb|EBA05889.1| D-3-phosphoglycerate dehydrogenase [Sagittula stellata E-37]
Length = 532
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 59/99 (59%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D ++G M+ N D+ GI+ +G LG G+NIA+F LGRS
Sbjct: 433 VFSDGKPRFIQIKGINIDAEVGAHMLYTTNEDVPGIIGTLGMTLGGMGVNIANFTLGRSA 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + KL+ R +K F+V
Sbjct: 493 AKGEAIALLYVDEPVPAEARAKLAETGMFRQIKPLSFDV 531
>gi|78044181|ref|YP_361480.1| D-3-phosphoglycerate dehydrogenase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996296|gb|ABB15195.1| D-3-phosphoglycerate dehydrogenase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 525
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 44/97 (45%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + +PR ++I + DV + + + D ++ VG ILGE GINIA LGR
Sbjct: 429 LFRNNEPRIVQIDQYRVDVVPEGYKLFVPHKDQPLMIGKVGIILGEKGINIAGMQLGRIT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D ++ ++ I VK
Sbjct: 489 PGGDAVMVLSLDHPADGDSIKAIAAIPGIYEVKAVSL 525
>gi|313125075|ref|YP_004035339.1| d-3-phosphoglycerate dehydrogenase [Halogeometricum borinquense DSM
11551]
gi|312291440|gb|ADQ65900.1| D-3-phosphoglycerate dehydrogenase [Halogeometricum borinquense DSM
11551]
Length = 534
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+ PR ++I D M+ N D G++ F+G +LGE +NIA R
Sbjct: 432 LFAGEDPRIVRIDGYRVDAIPHGQMLVARNYDKPGVIGFIGTVLGENDVNIAGMFNARRS 491
Query: 61 -STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A++ +D I V EKL + I VK N
Sbjct: 492 ADGGEALTVYNLDDPIPEEVSEKLLADERITDVKYLTLN 530
>gi|13473319|ref|NP_104886.1| D-3-phosphoglycerate dehydrogenase [Mesorhizobium loti MAFF303099]
gi|14024068|dbj|BAB50672.1| phosphoglycerate dehydrogenase [Mesorhizobium loti MAFF303099]
Length = 533
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/98 (42%), Positives = 64/98 (65%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++G+ M+ NAD GI+ +G + GE G+NIA+F LGR++
Sbjct: 433 FSDGKPRFIQIKGINLDAEVGQHMLYTTNADAPGIIGLLGTVCGENGVNIANFQLGRNRP 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D VLE++ + +I K+ +F+V
Sbjct: 493 GGDAIALLYLDAPFPEKVLEQVRAHKSIDSAKRLQFDV 530
>gi|121535994|ref|ZP_01667786.1| D-3-phosphoglycerate dehydrogenase [Thermosinus carboxydivorans
Nor1]
gi|121305430|gb|EAX46380.1| D-3-phosphoglycerate dehydrogenase [Thermosinus carboxydivorans
Nor1]
Length = 528
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 45/98 (45%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + R + I DVD ++ + D G+V VG ILGE+ INIA +GR++
Sbjct: 429 LFGKTEGRIVMIDGYRVDVDPQGWLLIGPHIDKPGMVGKVGTILGEHNINIAGMQVGRTE 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
I + ++ I V+ K+ I K FN
Sbjct: 489 QAGTNIMVMAVESDIPTPVMLKIKAVDGILGAKLVNFN 526
>gi|317969029|ref|ZP_07970419.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. CB0205]
Length = 528
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 45/97 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG+ R I E V + M+ + D+ GI+ +G++LGE+ +NIA +GR
Sbjct: 432 VFADGELRVTTIDEFPVSVTPSKHMLFTRHRDMPGIIGHIGSVLGEHNVNIASMQVGRRI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + +L + I+
Sbjct: 492 VRGDAVMVLSLDDPLPADLLAGIHAIEGIQQAHPVTL 528
>gi|297566778|ref|YP_003685750.1| D-3-phosphoglycerate dehydrogenase [Meiothermus silvanus DSM 9946]
gi|296851227|gb|ADH64242.1| D-3-phosphoglycerate dehydrogenase [Meiothermus silvanus DSM 9946]
Length = 521
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 40/89 (44%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
GKPR + + + +V M+ N D G+V VG +LG G+NIA LGR
Sbjct: 428 GGKPRLVGVDDYRLEVVPEGFMLICTNRDQPGVVGKVGTLLGGSGVNIAGMQLGRDAPGG 487
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID VL+ L + V
Sbjct: 488 KALFVLAIDERPSEEVLDALRGLDVLERV 516
>gi|163733251|ref|ZP_02140695.1| D-3-phosphoglycerate dehydrogenase [Roseobacter litoralis Och 149]
gi|161393786|gb|EDQ18111.1| D-3-phosphoglycerate dehydrogenase [Roseobacter litoralis Och 149]
Length = 531
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 60/99 (60%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ I D ++G M+ N D+ GI+ +G +GE G+NIA+F LGR+
Sbjct: 432 VFSDGKPRFIQIKGIQIDAEVGAHMLYTTNEDVPGIIGALGQTMGENGVNIANFTLGRAV 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + V++KL VK F+V
Sbjct: 492 AQGEAIALLYVDDQVPAPVIKKLEATGMFTQVKPLMFDV 530
>gi|110667020|ref|YP_656831.1| D-3-phosphoglycerate dehydrogenase [Haloquadratum walsbyi DSM
16790]
gi|109624767|emb|CAJ51173.1| phosphoglycerate dehydrogenase [Haloquadratum walsbyi DSM 16790]
Length = 534
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ- 60
F+ G+PR +KI D M+ NAD G++ F+G++LGE+ INIA R
Sbjct: 431 FTGGEPRIVKIDGYRVDAVPHGKMLVARNADKPGVIGFIGSVLGEHNINIAGMFNARRDI 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A++ +D S+ V+E+L + + V+ N
Sbjct: 491 EGGEALTIYNLDDSVPTDVVERLLADERMIDVRYLTLN 528
>gi|89052752|ref|YP_508203.1| D-3-phosphoglycerate dehydrogenase [Jannaschia sp. CCS1]
gi|88862301|gb|ABD53178.1| D-3-phosphoglycerate dehydrogenase [Jannaschia sp. CCS1]
Length = 531
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 45/97 (46%), Positives = 57/97 (58%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IG M+ N DI GI+ +G +GE G+NIA+F LGRS
Sbjct: 432 VFSDGKPRFIQIKGINIDAEIGEHMLYTTNHDIPGIIGTLGQTMGENGVNIANFTLGRSG 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ L +D VL KL VK +F
Sbjct: 492 RDGEAIALLYLDEQPPADVLGKLMETGLFESVKPLQF 528
>gi|312115664|ref|YP_004013260.1| D-3-phosphoglycerate dehydrogenase [Rhodomicrobium vannielii ATCC
17100]
gi|311220793|gb|ADP72161.1| D-3-phosphoglycerate dehydrogenase [Rhodomicrobium vannielii ATCC
17100]
Length = 526
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 53/97 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPR I+I + D + M+ VNAD G + +G +LG+ G+NIA F+LGR
Sbjct: 430 VFSDGKPRVIQINHVPMDAEFAPNMLFTVNADKPGHIGALGTLLGDEGVNIATFNLGREA 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ + +D + ++ ++K + + F
Sbjct: 490 QGGKAMALVTVDEPVSDATIQKALALPHVVRAARLSF 526
>gi|154245150|ref|YP_001416108.1| D-3-phosphoglycerate dehydrogenase [Xanthobacter autotrophicus Py2]
gi|154159235|gb|ABS66451.1| D-3-phosphoglycerate dehydrogenase [Xanthobacter autotrophicus Py2]
Length = 528
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG+PR + I+ IN D + MI + N D G + +LG+ G+NIA F LGR
Sbjct: 432 VFADGRPRIVNIKGINVDAEFAPSMIYVTNEDKPGFIGRFAGLLGDAGLNIATFALGRDH 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +DG++ VL K+ ++ K F
Sbjct: 492 LGGDAIALVAVDGTVPADVLGKVQALPQVKAAKALAF 528
>gi|257052425|ref|YP_003130258.1| D-3-phosphoglycerate dehydrogenase [Halorhabdus utahensis DSM
12940]
gi|256691188|gb|ACV11525.1| D-3-phosphoglycerate dehydrogenase [Halorhabdus utahensis DSM
12940]
Length = 520
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 45/98 (45%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F D +PR ++I D M+ N D G++ +G++ GEY +NIA R
Sbjct: 423 LFGDNEPRLVEIDGFRVDATPYGHMLISRNRDEPGVIGALGSVFGEYDVNIAGMANARES 482
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A+S +D + +LE+L + + V + +
Sbjct: 483 IDGEAMSVYNLDDPVTPELLEELESDTRVTGVTAIDLD 520
>gi|262276980|ref|ZP_06054773.1| phosphoglycerate dehydrogenase [alpha proteobacterium HIMB114]
gi|262224083|gb|EEY74542.1| phosphoglycerate dehydrogenase [alpha proteobacterium HIMB114]
Length = 526
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 46/95 (48%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
GKPR + ++ I + ++ + + I N D G + + IL + INIA F+LGR S
Sbjct: 431 GGKPRIVNVKGIKIEAELAKHNLYISNEDKPGFISNLSKILSDNNINIATFNLGRKDSGG 490
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
AI+ + D I VL+ + + K FN
Sbjct: 491 EAIALISTDNPIEEKVLDGIKKLPLVIQAKTLTFN 525
>gi|268324733|emb|CBH38321.1| D-3-phosphoglycerate dehydrogenase [uncultured archaeon]
Length = 542
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 40/97 (41%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F PR +KI D M+ D ++ V ILG++ INI +GR +
Sbjct: 446 LFGKDDPRIVKIDGFWMDASPSGHMLICSFIDKPRVIGPVCTILGDHSINITGMRVGREK 505
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + ++E + + +K +
Sbjct: 506 KEGEAVMVLNVDNPVAGDIIEDIMKVENLIDIKLVKL 542
>gi|254430175|ref|ZP_05043878.1| phosphoglycerate dehydrogenase [Cyanobium sp. PCC 7001]
gi|197624628|gb|EDY37187.1| phosphoglycerate dehydrogenase [Cyanobium sp. PCC 7001]
Length = 528
Score = 110 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG+ R I E +V R M+ + D+ GI+ +G++LGE+ +NIA +GR
Sbjct: 432 VFADGELRVTSIDEFPVNVTPSRHMLFTRHRDMPGIIGQIGSVLGEHNVNIASMQVGRRI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D I S+L ++ I+
Sbjct: 492 VRGDAVMVLSLDDPIPTSLLACVNDIDGIQEAHPVTL 528
>gi|85680324|gb|ABC72353.1| phosphoglycerate dehydrogenase [Haloquadratum walsbyi]
Length = 536
Score = 110 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ- 60
F+ G+PR +KI D M+ NAD G++ F+G++LGE+ INIA R
Sbjct: 433 FTGGEPRIVKIDGYRVDAVPHGKMLVARNADKPGVIGFIGSVLGEHNINIAGMFNARRDI 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A++ +D S+ V+E+L + + V+ N
Sbjct: 493 EGGEALTIYNLDDSVPTDVVERLLADERMIDVRYLTLN 530
>gi|88807419|ref|ZP_01122931.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. WH 7805]
gi|88788633|gb|EAR19788.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. WH 7805]
Length = 528
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG+ R I E +V R M+ + D+ GI+ +G++LGE+ +NIA +GR
Sbjct: 432 VFADGELRVTNIDEFPVNVPPSRHMLFTRHRDMPGIIGHLGSLLGEHNVNIASMQVGRRI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I ++L + I+
Sbjct: 492 VRGDAVMVLSIDDPIPPALLATIHGINGIQEAHPVTL 528
>gi|15606928|ref|NP_214309.1| D-3-phosphoglycerate dehydrogenase [Aquifex aeolicus VF5]
gi|2984165|gb|AAC07698.1| D-3-phosphoglycerate dehydrogenase [Aquifex aeolicus VF5]
Length = 533
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 46/95 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V PR +I D++ +++ N D+ G++ +G+ILGE INIA F LGR +
Sbjct: 437 VLEGQIPRITEIDRYKVDIEPEGILLVFENKDVPGVIGKIGSILGEANINIAGFRLGREK 496
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
AI L +D VL ++ I FVK
Sbjct: 497 KGGIAIGILNLDEPASEEVLSRIKEIPEILFVKHI 531
>gi|77464929|ref|YP_354433.1| D-3-phosphoglycerate dehydrogenase [Rhodobacter sphaeroides 2.4.1]
gi|221640849|ref|YP_002527111.1| D-3-phosphoglycerate dehydrogenase [Rhodobacter sphaeroides KD131]
gi|77389347|gb|ABA80532.1| D-3-phosphoglycerate dehydrogenase [Rhodobacter sphaeroides 2.4.1]
gi|221161630|gb|ACM02610.1| D-3-phosphoglycerate dehydrogenase [Rhodobacter sphaeroides KD131]
Length = 534
Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 43/98 (43%), Positives = 63/98 (64%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++GR M+ N D+ GI+ +G +G+ G+NIA+F LGR+
Sbjct: 436 FSDGKPRFIQIKGINIDAEVGRHMLYTTNEDVPGIIGLLGMTMGKNGVNIANFTLGRTSV 495
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D +I V+E L + VK EF+V
Sbjct: 496 GQEAIAILYLDQAIDPKVVETLESTGLFQQVKPLEFDV 533
>gi|126460798|ref|YP_001041912.1| D-3-phosphoglycerate dehydrogenase [Rhodobacter sphaeroides ATCC
17029]
gi|126102462|gb|ABN75140.1| D-3-phosphoglycerate dehydrogenase [Rhodobacter sphaeroides ATCC
17029]
Length = 531
Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 43/98 (43%), Positives = 63/98 (64%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++GR M+ N D+ GI+ +G +G+ G+NIA+F LGR+
Sbjct: 433 FSDGKPRFIQIKGINIDAEVGRHMLYTTNEDVPGIIGLLGMTMGKNGVNIANFTLGRTSV 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D +I V+E L + VK EF+V
Sbjct: 493 GQEAIAILYLDQAIDPKVVETLESTGLFQQVKPLEFDV 530
>gi|148240317|ref|YP_001225704.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. WH 7803]
gi|147848856|emb|CAK24407.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. WH 7803]
Length = 528
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG+ R I E +V R M+ + D+ GI+ +G++LGE+ +NIA +GR
Sbjct: 432 VFADGELRVTNIDEFPVNVPPSRHMLFTRHRDMPGIIGHLGSLLGEHNVNIASMQVGRRI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I ++L + I+
Sbjct: 492 VRGDAVMVLSIDDPIPPALLATIHGINGIQEAHPVTL 528
>gi|307294836|ref|ZP_07574678.1| D-3-phosphoglycerate dehydrogenase [Sphingobium chlorophenolicum
L-1]
gi|306879310|gb|EFN10528.1| D-3-phosphoglycerate dehydrogenase [Sphingobium chlorophenolicum
L-1]
Length = 526
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 52/97 (53%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + +PR +++ I + D+ M+ IVN D G + +G+ LGE +NI FHLGR
Sbjct: 429 LFGNAQPRLVELFGIKVEADLAGDMLYIVNQDAPGFIGRLGSTLGEANVNIGTFHLGRRN 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +DG++ +VL + ++ VK F
Sbjct: 489 QGGEAVLLLSLDGAVSEAVLSDICKLAGVKTVKLLRF 525
>gi|288819163|ref|YP_003433511.1| D-3-phosphoglycerate dehydrogenase [Hydrogenobacter thermophilus
TK-6]
gi|288788563|dbj|BAI70310.1| D-3-phosphoglycerate dehydrogenase [Hydrogenobacter thermophilus
TK-6]
gi|308752746|gb|ADO46229.1| D-3-phosphoglycerate dehydrogenase [Hydrogenobacter thermophilus
TK-6]
Length = 530
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 50/95 (52%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V PR +I DV+ +M+ N D+ G++ VG+ILG+ G+NIA F LGR +
Sbjct: 434 VLEGHVPRIFRIDNYRVDVEPEGIMLIFENKDVPGVIGKVGSILGDAGVNIAGFRLGREK 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ L +D + +L +LS + FVKQ
Sbjct: 494 RGGIALGILNLDDPVPEEILHELSKLPEVLFVKQV 528
>gi|73662348|ref|YP_301129.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72494863|dbj|BAE18184.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 538
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 49/100 (49%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V + PR ++I + D R + I + D GIV G ILGEYGINIA HLGR
Sbjct: 432 VLNGYGPRIVRINDYPVDFKPERHQLVINHNDRPGIVGRTGQILGEYGINIASMHLGRIN 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
+A+ L ID + + V++ L ++ E ++
Sbjct: 492 QGGNALMILSIDHPVTDDVIDGLYEIEGFNLIRSVELEIE 531
>gi|323701688|ref|ZP_08113360.1| D-3-phosphoglycerate dehydrogenase [Desulfotomaculum nigrificans
DSM 574]
gi|323533461|gb|EGB23328.1| D-3-phosphoglycerate dehydrogenase [Desulfotomaculum nigrificans
DSM 574]
Length = 527
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 43/97 (44%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F PR + I + M+ I + D GIV VG ++G+ INIA +GR +
Sbjct: 431 LFQGNDPRVVNIDGYRINAATTGHMLVIPHIDKPGIVGKVGTLVGDKDINIAGMQVGRIE 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI + +D + L++++ I VK
Sbjct: 491 LGGKAIMVMMVDNIVPQCALDEMAKIDGILEVKMVSL 527
>gi|55379323|ref|YP_137173.1| D-3-phosphoglycerate dehydrogenase [Haloarcula marismortui ATCC
43049]
gi|55232048|gb|AAV47467.1| D-3-phosphoglycerate dehydrogenase [Haloarcula marismortui ATCC
43049]
Length = 528
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 43/96 (44%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F +PR ++I + + M+ + N D G + F+G +LGE INIA GR
Sbjct: 430 FGGEEPRIVRIDDHRIEAVPHGHMLVVRNRDEPGTIGFIGTVLGEADINIAGMFNGRETI 489
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+S +D ++E+L+ + I E
Sbjct: 490 GGEALSVYNLDEQPPQDIIERLNDDSRIIETTYVEL 525
>gi|146276068|ref|YP_001166227.1| D-3-phosphoglycerate dehydrogenase [Rhodobacter sphaeroides ATCC
17025]
gi|145554309|gb|ABP68922.1| D-3-phosphoglycerate dehydrogenase [Rhodobacter sphaeroides ATCC
17025]
Length = 531
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 43/98 (43%), Positives = 63/98 (64%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++GR M+ N D+ GI+ +G +G+ G+NIA+F LGR+
Sbjct: 433 FSDGKPRFIQIKGINIDAEVGRHMLYTTNEDVPGIIGLLGMTMGKNGVNIANFTLGRTSV 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D +I V+E L + VK EF+V
Sbjct: 493 GQEAIAILYLDQAIDPKVVETLESTGMFQQVKPLEFDV 530
>gi|84502815|ref|ZP_01000928.1| D-3-phosphoglycerate dehydrogenase [Oceanicola batsensis HTCC2597]
gi|84388798|gb|EAQ01668.1| D-3-phosphoglycerate dehydrogenase [Oceanicola batsensis HTCC2597]
Length = 531
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 39/99 (39%), Positives = 60/99 (60%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D ++G M+ N D+ GI+ +G +G+ G+NIA+F LGR+
Sbjct: 432 VFSDGKPRFIQIKGINIDAEVGAHMLYTTNEDVPGIIGTLGQTMGQNGVNIANFTLGRAS 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + L L R +K +F++
Sbjct: 492 AAGEAIALLYLDEAPRKDALSALEQTGLFRQIKPLQFDI 530
>gi|27382512|ref|NP_774041.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizobium japonicum USDA
110]
gi|27355684|dbj|BAC52666.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizobium japonicum USDA
110]
Length = 529
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V+ DGKPR + ++ I D + G+ MI + N D G + ++LG +NIA FHLGR +
Sbjct: 433 VYHDGKPRLVDVKGIRVDAEFGKSMIYVTNEDKPGFIGAFASLLGAAKLNIATFHLGRVK 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +DG++ VL K+ ++ K F
Sbjct: 493 LGGDAIALVEVDGAVPADVLAKVQALPQVKQAKALTF 529
>gi|310814538|ref|YP_003962502.1| D-3-phosphoglycerate dehydrogenase [Ketogulonicigenium vulgare Y25]
gi|308753273|gb|ADO41202.1| D-3-phosphoglycerate dehydrogenase [Ketogulonicigenium vulgare Y25]
Length = 531
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 46/100 (46%), Positives = 64/100 (64%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+EIN D +IG MI N D+ G++ +G ILGE G+NIA+F LGR+
Sbjct: 432 VFSDGKPRFIQIKEINVDAEIGADMIYTTNKDVPGVIGTLGGILGENGVNIANFTLGRAD 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
AI+ L +DG +VL+K+ + V F+V+
Sbjct: 492 QGGEAIAVLYVDGRPDEAVLDKVRASGKFGQVTAMHFDVN 531
>gi|182678253|ref|YP_001832399.1| D-3-phosphoglycerate dehydrogenase [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182634136|gb|ACB94910.1| D-3-phosphoglycerate dehydrogenase [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 529
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF DGKPR I I +I D + +MI + N D G + ++LG +NIA F LGR +
Sbjct: 433 VFHDGKPRIIAINDIKIDAAVAPVMIYVSNEDKPGFIGRFASLLGNASVNIATFALGRDR 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +DG++ SV ++ ++ VK F
Sbjct: 493 EGGSAIALVEVDGAVPESVQNEVKALPGVKKVKALAF 529
>gi|108803680|ref|YP_643617.1| D-3-phosphoglycerate dehydrogenase [Rubrobacter xylanophilus DSM
9941]
gi|108764923|gb|ABG03805.1| D-3-phosphoglycerate dehydrogenase [Rubrobacter xylanophilus DSM
9941]
Length = 527
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+PR ++ D+ R M+ I N D+ G++ VG ILGE+GINI + +GR + A
Sbjct: 435 QPRLVEALGYTLDIVPERHMLFIRNEDVPGMIGKVGTILGEHGINIGNMAVGRGEPGSRA 494
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ +D + V+E L +
Sbjct: 495 AMAVTVDEPVPPEVVESLLNIPGFNDARAVTL 526
>gi|33863698|ref|NP_895258.1| D-3-phosphoglycerate dehydrogenase [Prochlorococcus marinus str.
MIT 9313]
gi|33635281|emb|CAE21606.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Prochlorococcus
marinus str. MIT 9313]
Length = 532
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 46/97 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++G R I E +V R M+ + D+ GI+ +G++LGE+ +NIA +GR
Sbjct: 436 VFANGDLRITTIDEFPVNVSPSRHMLLTRHRDMPGIIGQLGSVLGEHNVNIASMQVGRRI 495
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I S+L + I+
Sbjct: 496 VRGDAVMVLSIDDPIPPSLLVTIHAINGIKEAHPVTL 532
>gi|87123644|ref|ZP_01079494.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Synechococcus
sp. RS9917]
gi|86168213|gb|EAQ69470.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Synechococcus
sp. RS9917]
Length = 528
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 46/97 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG R I E +V R M+ + D+ GI+ +G++LGE+ +NIA +GR
Sbjct: 432 VFADGDLRVTSIDEFPVNVPPSRHMLFTRHRDMPGIIGHLGSLLGEHNVNIASMQVGRRI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I S+L + I+
Sbjct: 492 VRGDAVMVLSIDDPIPPSLLATIHAINGIQEAHPVTL 528
>gi|134297895|ref|YP_001111391.1| D-3-phosphoglycerate dehydrogenase [Desulfotomaculum reducens MI-1]
gi|134050595|gb|ABO48566.1| D-3-phosphoglycerate dehydrogenase [Desulfotomaculum reducens MI-1]
Length = 526
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 45/97 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F PR + I + M+ + + D GIV VG ++G+ INIA +GR +
Sbjct: 430 LFQGNDPRIVNIDGFRINAATQGHMLVVPHIDKPGIVGKVGTVVGDMAINIAGMQVGRIE 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI + +D ++ + LE+L+ I VK
Sbjct: 490 LGGKAIMVMMVDNTLPTNALEQLATIDGILEVKMVSL 526
>gi|84687790|ref|ZP_01015661.1| D-3-phosphoglycerate dehydrogenase [Maritimibacter alkaliphilus
HTCC2654]
gi|84664226|gb|EAQ10719.1| D-3-phosphoglycerate dehydrogenase [Rhodobacterales bacterium
HTCC2654]
Length = 532
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 60/99 (60%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ I D +IG M+ N D+ GI+ +G LGE G+NIA+F LGR+Q
Sbjct: 434 VFSDGKPRFIQIKGITIDAEIGEHMLYTTNKDVPGIIGTLGRTLGEMGVNIANFTLGRNQ 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ L +D + +V + LS + V +F +
Sbjct: 494 QGGDAIALLYVDAEVPANVRKALSDTGMFQNVSALQFAI 532
>gi|124022234|ref|YP_001016541.1| D-3-phosphoglycerate dehydrogenase [Prochlorococcus marinus str.
MIT 9303]
gi|123962520|gb|ABM77276.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Prochlorococcus
marinus str. MIT 9303]
Length = 528
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 46/97 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++G R I E +V R M+ + D+ GI+ +G++LGE+ +NIA +GR
Sbjct: 432 VFANGDLRITTIDEFPVNVSPSRHMLLTRHRDMPGIIGQLGSVLGEHNVNIASMQVGRRI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I S+L + I+
Sbjct: 492 VRGDAVMVLSIDDPIPPSLLVTIHAINGIKEAHPVTL 528
>gi|318042229|ref|ZP_07974185.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. CB0101]
Length = 528
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 47/97 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG+ R I E +V R M+ + D+ GI+ +G++LGE+ +NIA +GR
Sbjct: 432 VFADGELRITTIDEFPVNVAPSRHMLFTRHRDMPGIIGNLGSVLGEHNVNIASMQVGRRI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + S+L + I+
Sbjct: 492 VRGDAVMVLSLDDPLPASLLATIHGIEGIQEAHPVTL 528
>gi|291294575|ref|YP_003505973.1| D-3-phosphoglycerate dehydrogenase [Meiothermus ruber DSM 1279]
gi|290469534|gb|ADD26953.1| D-3-phosphoglycerate dehydrogenase [Meiothermus ruber DSM 1279]
Length = 521
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 40/89 (44%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
GKPR + I + + M+ +N D G+V VG +LGE INIA LGR
Sbjct: 428 GGKPRIVGIDDHTVEAVPRGFMLVCINRDRPGVVGKVGTLLGENNINIAGMQLGRDNPGG 487
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID +VL L + V
Sbjct: 488 KALFVLAIDERPGEAVLSALRGLDVLERV 516
>gi|257052567|ref|YP_003130400.1| D-3-phosphoglycerate dehydrogenase [Halorhabdus utahensis DSM
12940]
gi|256691330|gb|ACV11667.1| D-3-phosphoglycerate dehydrogenase [Halorhabdus utahensis DSM
12940]
Length = 528
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 45/97 (46%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F+DG+PR + I + M+ + NAD G++ F+G +LGEY +NIA R
Sbjct: 426 FADGEPRIVSIDRYWVEAIPHGHMLIVRNADEPGVIGFIGTVLGEYDVNIAGMFNAREAI 485
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A+S +D VL L+ + I E N
Sbjct: 486 GGEALSVYNLDDEPGEDVLAALNDDDRILETTVVELN 522
>gi|194016714|ref|ZP_03055327.1| phosphoglycerate dehydrogenase [Bacillus pumilus ATCC 7061]
gi|194011320|gb|EDW20889.1| phosphoglycerate dehydrogenase [Bacillus pumilus ATCC 7061]
Length = 524
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 44/90 (48%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R + I N D ++ I + D G++ VG ILG++ +NIA +GR + AI
Sbjct: 435 RVVSINGFNIDFYPDGHLVYIQHTDAPGVIGKVGQILGDHDVNIATMQVGRKEKGGEAIM 494
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L D + + ++++L+ I V+ +
Sbjct: 495 MLSFDKHLEDEIVKELTEVHDILSVRLIDL 524
>gi|222056517|ref|YP_002538879.1| D-3-phosphoglycerate dehydrogenase [Geobacter sp. FRC-32]
gi|221565806|gb|ACM21778.1| D-3-phosphoglycerate dehydrogenase [Geobacter sp. FRC-32]
Length = 540
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 50/94 (53%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G PR +++++ + D M+ + D G++ +G I+G +GINIA +LGR +
Sbjct: 436 EGAPRIVRLRDYSMDFAPDEHMLLLNYTDRPGMIGQIGTIMGTHGINIASMNLGRREKKG 495
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D ++ V+E++ + +++
Sbjct: 496 EAMVILSLDSAVPPEVVEEMKTAIDATYIRAIHM 529
>gi|39996300|ref|NP_952251.1| D-3-phosphoglycerate dehydrogenase [Geobacter sulfurreducens PCA]
gi|39983180|gb|AAR34574.1| D-3-phosphoglycerate dehydrogenase [Geobacter sulfurreducens PCA]
gi|298505310|gb|ADI84033.1| D-3-phosphoglycerate dehydrogenase [Geobacter sulfurreducens KN400]
Length = 542
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 51/94 (54%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G PR +++++ + D M+ + AD G++ +G I+G++ INIA +LGRS+
Sbjct: 436 EGLPRIVRLRDYSMDFAPEEHMLLLHYADRPGMIGKIGTIMGQHEINIASMNLGRSEKKG 495
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D ++ VLE++ F+K
Sbjct: 496 EAMVILSLDSAVPPQVLEEVRAATDATFIKAIHM 529
>gi|157692807|ref|YP_001487269.1| D-3-phosphoglycerate dehydrogenase [Bacillus pumilus SAFR-032]
gi|157681565|gb|ABV62709.1| phosphoglycerate dehydrogenase [Bacillus pumilus SAFR-032]
Length = 524
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 44/90 (48%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R + I N D ++ I + D G++ VG ILG++ +NIA +GR + AI
Sbjct: 435 RVVSINGFNIDFYPDGHLVYIQHTDAPGVIGKVGQILGDHDVNIATMQVGRKEKGGEAIM 494
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L D + + ++++L+ I V+ +
Sbjct: 495 MLSFDKHLEDEIVKELTEVHDILSVRLIDL 524
>gi|254486096|ref|ZP_05099301.1| phosphoglycerate dehydrogenase [Roseobacter sp. GAI101]
gi|214042965|gb|EEB83603.1| phosphoglycerate dehydrogenase [Roseobacter sp. GAI101]
Length = 531
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/99 (44%), Positives = 62/99 (62%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D +IG M+ N D+ GI+ +G LG G+NIA+F LGRS
Sbjct: 432 VFSDGKPRFIQIKGINIDAEIGAHMLYTTNEDVPGIIGTLGQTLGANGVNIANFTLGRSV 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L ID + + +++L VK+ EF+V
Sbjct: 492 AKGEAIALLYIDDVLPATAIKQLQDTGLFTQVKELEFDV 530
>gi|319892782|ref|YP_004149657.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus pseudintermedius
HKU10-03]
gi|317162478|gb|ADV06021.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus pseudintermedius
HKU10-03]
gi|323464187|gb|ADX76340.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus pseudintermedius
ED99]
Length = 531
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 47/98 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V + PR ++I + D + I + D GIV G ILGE+G+NIA HLGRSQ
Sbjct: 432 VLNGFGPRIVRINDYPVDFKPEHYQLVIHHFDRPGIVGKTGQILGEHGVNIASMHLGRSQ 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A+ L ID I +V E L + V Q +
Sbjct: 492 IGGDAMMILSIDHPINETVREALLKIDGFQSVLQVTLD 529
>gi|159903950|ref|YP_001551294.1| D-3-phosphoglycerate dehydrogenase [Prochlorococcus marinus str.
MIT 9211]
gi|159889126|gb|ABX09340.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Prochlorococcus
marinus str. MIT 9211]
Length = 528
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG R I E +V R M+ + D+ GI+ +G++LG + +NIA +GR
Sbjct: 432 VFADGDLRITCIDEFPVNVAPSRHMLFTRHRDMPGIIGKIGSLLGVHNVNIASMQVGRRI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I + +L+ + I
Sbjct: 492 VRGEAVMVLSIDDPIPSELLKSILQIQGINEAHPVTL 528
>gi|76800791|ref|YP_325799.1| D-3-phosphoglycerate dehydrogenase [Natronomonas pharaonis DSM
2160]
gi|76556656|emb|CAI48227.1| phosphoglycerate dehydrogenase [Natronomonas pharaonis DSM 2160]
Length = 526
Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 42/98 (42%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+D R +++ D G M+ N D G++ +G ++G Y +NIA R
Sbjct: 428 LFADDDARIVRVDGYRVDAIPGGKMMVARNTDEPGVIGHIGTVMGTYDVNIAGMFNARET 487
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A++ +D + + E+L + I K N
Sbjct: 488 HGGEALTVYNVDQEVPDEAREELESDDRIIETKYISLN 525
>gi|257386858|ref|YP_003176631.1| D-3-phosphoglycerate dehydrogenase [Halomicrobium mukohataei DSM
12286]
gi|257169165|gb|ACV46924.1| D-3-phosphoglycerate dehydrogenase [Halomicrobium mukohataei DSM
12286]
Length = 529
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 44/97 (45%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F+ PR ++I + D M+ N D G + F+G +LGE INIA GR
Sbjct: 430 FAGEDPRIVRIDDHRVDAVPHGHMLVARNRDEPGTIGFIGTVLGESDINIAGMFNGREVI 489
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A+S +D + VL++L+ + I K +
Sbjct: 490 GGEALSVYNLDEPPTSDVLDRLNGDDRIIETKYISLD 526
>gi|330813822|ref|YP_004358061.1| D-3-phosphoglycerate dehydrogenase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486917|gb|AEA81322.1| D-3-phosphoglycerate dehydrogenase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 527
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 46/94 (48%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
GKPR ++++ I D + + I N D G + + +L + INI F+LGR +S
Sbjct: 432 GKPRIVEVKGIEIDAGLSAHNLYISNEDKPGFIRDLSKVLADNKINIGTFNLGRKKSGGE 491
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A++ + D I +V+E + + K FN
Sbjct: 492 AVALISTDSEIEKTVIESIKKIPLVIQAKYLSFN 525
>gi|113954952|ref|YP_731454.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. CC9311]
gi|113882303|gb|ABI47261.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. CC9311]
Length = 528
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 46/97 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG R I E +V R M+ + D+ GI+ +G++LGE+ +NIA +GR
Sbjct: 432 VFADGDLRVTSIDEFPVNVPPSRHMLFTRHRDMPGIIGHLGSLLGEHNVNIASMQVGRRI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I ++L + I+
Sbjct: 492 VRGDAVMVLSIDDPIPPALLTTIHGINGIQEAHPVTL 528
>gi|78779836|ref|YP_397948.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Prochlorococcus
marinus str. MIT 9312]
gi|78713335|gb|ABB50512.1| D-3-phosphoglycerate dehydrogenase [Prochlorococcus marinus str.
MIT 9312]
Length = 528
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+DG+ R I I + +V R M+ + D+ GI+ +G++LG +NIA +GR
Sbjct: 432 IFADGELRIISIDQYPVNVSPSRYMLVTRHRDMPGIIGKLGSLLGSNNVNIASMQVGRKI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I N +L+ + I
Sbjct: 492 VRGEAVMVLSIDDPIPNKLLDTIIEVEGITSANPVTL 528
>gi|312621616|ref|YP_004023229.1| d-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202083|gb|ADQ45410.1| D-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 531
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 44/89 (49%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + R I D + M+ I N D G++ +G I+GEYGINIA + R++ E
Sbjct: 438 NNEGRIIDFFGYKVDFKPEKYMLLIQNIDKPGMIGKIGTIVGEYGINIATMQVSRNKKGE 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ IDG + + +EKL I V
Sbjct: 498 KAVMVCEIDGELPDEAVEKLKNTDGILRV 526
>gi|189425146|ref|YP_001952323.1| D-3-phosphoglycerate dehydrogenase [Geobacter lovleyi SZ]
gi|189421405|gb|ACD95803.1| D-3-phosphoglycerate dehydrogenase [Geobacter lovleyi SZ]
Length = 535
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 50/94 (53%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G PR +++++ D M+ + AD G++ +G I+G++ INI +LGRS+
Sbjct: 435 EGAPRIVRLRDYAMDFTPEEHMLLLHYADRPGMIGKIGTIMGKHEINIGSMNLGRSEKKG 494
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID ++ +V+E++ F++
Sbjct: 495 EAMVILSIDSAVSQAVIEEIKQATEATFIRAIHM 528
>gi|294010170|ref|YP_003543630.1| D-3-phosphoglycerate dehydrogenase [Sphingobium japonicum UT26S]
gi|292673500|dbj|BAI95018.1| D-3-phosphoglycerate dehydrogenase [Sphingobium japonicum UT26S]
Length = 526
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 52/97 (53%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + +PR +++ I + D+ M+ IVN D G + +G+ LGE +NI FHLGR
Sbjct: 429 LFGNAQPRLVELFGIKVEADLAGDMLYIVNQDAPGFIGRLGSTLGEAQVNIGTFHLGRRN 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +DG++ +VL + ++ VK F
Sbjct: 489 QGGEAVLLLSLDGAVNEAVLSDICKLAGVKTVKLLRF 525
>gi|94496033|ref|ZP_01302612.1| D-3-phosphoglycerate dehydrogenase [Sphingomonas sp. SKA58]
gi|94424725|gb|EAT09747.1| D-3-phosphoglycerate dehydrogenase [Sphingomonas sp. SKA58]
Length = 517
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 50/97 (51%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F +PR +++ I + D+G M+ IVN D G + +G+ LGE +NI FHLGR
Sbjct: 420 LFGHAQPRLVELFGIKVEADLGGTMLYIVNQDAPGFIGRLGSTLGEANVNIGTFHLGRRD 479
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +DG++ + ++ + VK F
Sbjct: 480 QGGEAVLLLSVDGTVTEPLRWEICNLTGVNQVKLLRF 516
>gi|289549238|ref|YP_003474226.1| D-3-phosphoglycerate dehydrogenase [Thermocrinis albus DSM 14484]
gi|289182855|gb|ADC90099.1| D-3-phosphoglycerate dehydrogenase [Thermocrinis albus DSM 14484]
Length = 530
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 46/88 (52%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R ++I DV+ +++ N D+ G++ VG+ILG +NIA F LGR + A+
Sbjct: 441 RLVRIDSYMVDVEPEGILLIFENKDVPGVIGKVGSILGRANVNIAGFRLGREKKGGIALG 500
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQF 95
L +D + VL +L I FV+Q
Sbjct: 501 ILNLDDPVPEEVLAELKAVPEIFFVRQV 528
>gi|160879605|ref|YP_001558573.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium phytofermentans ISDg]
gi|160428271|gb|ABX41834.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium phytofermentans ISDg]
Length = 222
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK + ++I I+ D + I + D G+V ++ L E +NIA L R +
Sbjct: 128 GGGKIKIVRINGIDVDFTGEYSTLVIRHHDYPGMVAYIATSLSERNVNIAFMRLFRERKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A S + D I +LEKL + + V +
Sbjct: 188 ATAYSVVESDEEIPRELLEKLREHPKVEDVMLIQ 221
>gi|289581556|ref|YP_003480022.1| D-3-phosphoglycerate dehydrogenase [Natrialba magadii ATCC 43099]
gi|289531109|gb|ADD05460.1| D-3-phosphoglycerate dehydrogenase [Natrialba magadii ATCC 43099]
Length = 528
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 45/98 (45%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+ PR +++ D M+ N D G++ +G ++G++G+NIA R
Sbjct: 428 LFAGDDPRIVRVDGYRVDAIPHGKMVVTRNTDEPGVIGLIGTVMGKHGVNIAGMFNAREA 487
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A++ +D + ++ ++L+ + I V N
Sbjct: 488 HGGEALTVYNVDSQVPDAAKDELNEDDRIIGVDYITLN 525
>gi|222530091|ref|YP_002573973.1| D-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor bescii DSM
6725]
gi|222456938|gb|ACM61200.1| D-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor bescii DSM
6725]
Length = 531
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 44/89 (49%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + R I D + M+ I N D G++ +G I+GEYGINIA + R++ E
Sbjct: 438 NNEGRIIDFFGYKVDFKPEKYMLLIQNIDKPGMIGKIGTIVGEYGINIATMQVSRNKKGE 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ IDG + + +EKL I V
Sbjct: 498 KAVMVCEIDGELPDEAIEKLKNTDGILRV 526
>gi|323135941|ref|ZP_08071024.1| D-3-phosphoglycerate dehydrogenase [Methylocystis sp. ATCC 49242]
gi|322399032|gb|EFY01551.1| D-3-phosphoglycerate dehydrogenase [Methylocystis sp. ATCC 49242]
Length = 528
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 45/97 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF DGKPR +I +I D + MI N D G + +LGE +NIA F LGR
Sbjct: 432 VFHDGKPRIARIGDIGIDAEFAPSMIYTENEDRPGFIGRFAGLLGEAKVNIATFALGRDM 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ + IDG + VL + ++ F
Sbjct: 492 PGGCAVALVAIDGELPEDVLAAIRDLPGVKQALTLRF 528
>gi|85859018|ref|YP_461220.1| D-3-phosphoglycerate dehydrogenase [Syntrophus aciditrophicus SB]
gi|85722109|gb|ABC77052.1| D-3-phosphoglycerate dehydrogenase [Syntrophus aciditrophicus SB]
Length = 527
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 45/97 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F PR ++I + DV ++ + N D G++ +G +G INIA H R Q
Sbjct: 431 LFGRRDPRIVRINQFTVDVIPEGHLLMLYNHDKPGVIGNIGTAIGSANINIARMHWSRLQ 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ + A+ D + +L+KL + V++ +
Sbjct: 491 AEQKAMVVFSTDTPVDAQLLKKLKETPNVISVQELDM 527
>gi|325284843|ref|YP_004264305.1| D-3-phosphoglycerate dehydrogenase [Deinococcus proteolyticus MRP]
gi|324316558|gb|ADY27670.1| D-3-phosphoglycerate dehydrogenase [Deinococcus proteolyticus MRP]
Length = 534
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D ++G M+ N D+ G++ +G LG+ G+NIA+F LGRS
Sbjct: 437 VFSDGKPRFIQIRGINLDAEVGEHMLYTRNRDVPGVIGSLGTALGDLGVNIANFTLGRSA 496
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ + +D + + + L + V+ F +
Sbjct: 497 QGD-AIAIIYLDEPLPAAAAQALRDSGKFIQVRPLHFEL 534
>gi|410116|gb|AAA67502.1| phosphoglycerate dehydrogenase [Bacillus subtilis subsp. subtilis
str. 168]
Length = 419
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + R ++I N D ++ I + D G++ VG ILG+ INIA +GR +
Sbjct: 326 FGE---RIVEINGFNIDFYPTGHLVYIQHQDTTGVIGRVGRILGDNDINIATMQVGRKEK 382
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L D + + ++++L+ I VK +
Sbjct: 383 GGEAIMMLSFDRHLEDKIVKELTNVPDIVSVKLIDL 418
>gi|302872524|ref|YP_003841160.1| D-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor
obsidiansis OB47]
gi|302575383|gb|ADL43174.1| D-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor
obsidiansis OB47]
Length = 531
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + R I D + M+ I N D G++ +G I+GEYGINIA + R++ E
Sbjct: 438 NNEGRIIDFFGYKVDFKPEKYMLLIQNIDKPGMIGKIGTIVGEYGINIATMQVSRNKKGE 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ +DG++ + +EKL I V
Sbjct: 498 KAVMVCEVDGALPDEAVEKLKNTDGILRV 526
>gi|148242943|ref|YP_001228100.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. RCC307]
gi|147851253|emb|CAK28747.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. RCC307]
Length = 528
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 46/97 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG R I E +V R M+ + D+ GI+ +G++LGE+ +NIA +GR
Sbjct: 432 VFADGDLRITSIDEFPLNVPPSRHMLFTRHRDMPGIIGNLGSLLGEHNVNIASMQVGRRI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D I +S L + I+
Sbjct: 492 VRGDAVMVLSLDDPIPSSTLTSVKDINGIQEAHPVTL 528
>gi|197106733|ref|YP_002132110.1| D-3-phosphoglycerate dehydrogenase [Phenylobacterium zucineum HLK1]
gi|196480153|gb|ACG79681.1| D-3-phosphoglycerate dehydrogenase [Phenylobacterium zucineum HLK1]
Length = 524
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 50/93 (53%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G PR I+++ ++ D M+ + N D G + +G +LG+ INIA F+LGR + +
Sbjct: 432 GAPRIIEVKGMDLDAPFAPQMLYVNNLDKPGFIGALGALLGDAKINIATFNLGRIDAGDD 491
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +D + ++L K+ ++ + F
Sbjct: 492 AIALVGVDQAPDEALLAKIQKLPHVKEARALRF 524
>gi|223940712|ref|ZP_03632551.1| D-3-phosphoglycerate dehydrogenase [bacterium Ellin514]
gi|223890639|gb|EEF57161.1| D-3-phosphoglycerate dehydrogenase [bacterium Ellin514]
Length = 526
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 48/95 (50%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ +PR +++ +V ++ + N D GIV ++G ++G + +NIA L R +
Sbjct: 432 AKKQPRIVRVNGQPVEVVPEGVLFLMTNKDRPGIVGYLGTLMGRHNVNIASMSLSRDIAG 491
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
HA++ L +D + LE++ + I V+ +
Sbjct: 492 GHALTVLNLDSVPSETALEEIRKDPDISNVRVVKL 526
>gi|254444984|ref|ZP_05058460.1| D-3-phosphoglycerate dehydrogenase [Verrucomicrobiae bacterium
DG1235]
gi|198259292|gb|EDY83600.1| D-3-phosphoglycerate dehydrogenase [Verrucomicrobiae bacterium
DG1235]
Length = 545
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
PR + I +V+ M+ I N+D LGIV +G I+G+ G+NIA L R++
Sbjct: 452 GNFPRIVSINGREVEVEPHGSMLVIANSDELGIVGKIGEIIGKDGVNIAAMSLSRNEVGG 511
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ +D + ++ + ++ I+ K
Sbjct: 512 VALNIASLDSDLSDAAMAEIKAIEAIKQAKVVHL 545
>gi|123969087|ref|YP_001009945.1| D-3-phosphoglycerate dehydrogenase [Prochlorococcus marinus str.
AS9601]
gi|123199197|gb|ABM70838.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Prochlorococcus
marinus str. AS9601]
Length = 528
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+DG+ R I I + +V R M+ + D+ GI+ +G++LG +NIA +GR
Sbjct: 432 IFADGELRIISIDQYPVNVSPSRYMLVTRHRDMPGIIGKLGSLLGSNNVNIASMQVGRKI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I N +L+ + I
Sbjct: 492 VRGEAVMVLSIDDPIPNKLLDTIIEVEGITNANPVTL 528
>gi|163742511|ref|ZP_02149897.1| D-3-phosphoglycerate dehydrogenase [Phaeobacter gallaeciensis 2.10]
gi|161384096|gb|EDQ08479.1| D-3-phosphoglycerate dehydrogenase [Phaeobacter gallaeciensis 2.10]
Length = 531
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D ++G M+ N D+ GI+ +G ILG+ G+NIA+F LGRS+
Sbjct: 432 VFSDGKPRFIQIKGINIDAEVGAHMLYTTNEDVPGIIGTLGQILGDMGVNIANFTLGRSE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + + L+ +K +F+V
Sbjct: 492 AGGEAIALLYVDEPVPAAARAALAETEFFNQIKPLQFDV 530
>gi|150399650|ref|YP_001323417.1| D-3-phosphoglycerate dehydrogenase [Methanococcus vannielii SB]
gi|150012353|gb|ABR54805.1| D-3-phosphoglycerate dehydrogenase [Methanococcus vannielii SB]
Length = 523
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 46/92 (50%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ F +I D+ + I + D G+V VG ILGE+GINIA +GR + H+
Sbjct: 432 EVVFREINGYRMDIKPEGTICIIKHIDRPGMVGKVGLILGEHGINIAGMQVGRKEPGGHS 491
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
I FL ID I V++++ +R V+
Sbjct: 492 IMFLDIDHMIPEEVMDEIKKIENVRAVRAINI 523
>gi|312135806|ref|YP_004003144.1| d-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor owensensis
OL]
gi|311775857|gb|ADQ05344.1| D-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor owensensis
OL]
Length = 531
Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + R I D + M+ I N D G++ +G I+GEYGINIA + R++ E
Sbjct: 438 NNEGRIIDFFGYKVDFKPEKYMLLIQNIDKPGMIGKIGTIVGEYGINIATMQVSRNKKGE 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ +DG++ + +EKL I V
Sbjct: 498 KAVMVCEVDGALPDEAVEKLKSTDGILRV 526
>gi|312126868|ref|YP_003991742.1| d-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor
hydrothermalis 108]
gi|311776887|gb|ADQ06373.1| D-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor
hydrothermalis 108]
Length = 531
Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 44/89 (49%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + R I D + M+ I N D G++ +G I+GEYGINIA + R++ E
Sbjct: 438 NNEGRIIDFFGYKVDFKPEKYMLIIQNIDKPGMIGRIGTIVGEYGINIATMQVSRNKKGE 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ IDG + + +EKL I V
Sbjct: 498 KAVMVCEIDGELPDEAVEKLRNTDGILRV 526
>gi|154500566|ref|ZP_02038604.1| hypothetical protein BACCAP_04239 [Bacteroides capillosus ATCC
29799]
gi|150270455|gb|EDM97764.1| hypothetical protein BACCAP_04239 [Bacteroides capillosus ATCC
29799]
Length = 231
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 34/98 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ R I ++ + I N D G V V IL +NIA L R+
Sbjct: 133 GGGRVRVNAIDGLDASFTGEYPTLIIRNEDKPGAVAEVTGILSRRQVNIATMQLYRNMRG 192
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
A+ L D I +E+L I V D
Sbjct: 193 GLAVMVLESDQDIWQEAIEELRACPGIVRVTYLNMEED 230
>gi|305674943|ref|YP_003866615.1| D-3-phosphoglycerate dehydrogenase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|305413187|gb|ADM38306.1| D-3-phosphoglycerate dehydrogenase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 525
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + R ++I N D ++ I + D G++ VG ILG+ INIA +GR +
Sbjct: 432 FGE---RIVEINGFNIDFYPTGHLVYIQHQDTTGVIGRVGRILGDNDINIATMQVGRKEK 488
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L D + + ++++L+ I VK +
Sbjct: 489 GGEAIMMLSFDRHLEDKIVKELTEVPDIVSVKLIDL 524
>gi|146296326|ref|YP_001180097.1| D-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409902|gb|ABP66906.1| D-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 531
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + R I D + M+ I N D G++ +G I+GEYGINIA + R++ E
Sbjct: 438 NNEGRIIDFFGYKVDFKPEKYMLLIQNIDKPGMIGKIGTIVGEYGINIATMQVSRNKKGE 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ IDG++ + +EKL I V
Sbjct: 498 KAVMVCEIDGALPDEAVEKLKSVDGILRV 526
>gi|126696878|ref|YP_001091764.1| D-3-phosphoglycerate dehydrogenase [Prochlorococcus marinus str.
MIT 9301]
gi|126543921|gb|ABO18163.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Prochlorococcus
marinus str. MIT 9301]
Length = 528
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+DG+ R I I + +V R M+ + D+ GI+ +G++LG +NIA +GR
Sbjct: 432 IFADGELRIISIDQYPVNVSPSRYMLVTRHRDMPGIIGKLGSLLGSNNVNIASMQVGRKI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I N +L+ + I
Sbjct: 492 VRGEAVMVLSIDDPIPNKLLDTIIEVDGITNANPVTL 528
>gi|163738093|ref|ZP_02145509.1| flagellar L-ring protein precursor H [Phaeobacter gallaeciensis
BS107]
gi|161388709|gb|EDQ13062.1| D-3-phosphoglycerate dehydrogenase [Phaeobacter gallaeciensis
BS107]
Length = 531
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D ++G M+ N D+ GI+ +G ILG+ G+NIA+F LGRS+
Sbjct: 432 VFSDGKPRFIQIKGINIDAEVGAHMLYTTNEDVPGIIGTLGQILGDMGVNIANFTLGRSE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + + L+ +K +F+V
Sbjct: 492 AGGEAIALLYVDEPVPAAARAALAETEFFNQIKPLQFDV 530
>gi|312792696|ref|YP_004025619.1| d-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179836|gb|ADQ40006.1| D-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 531
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + R I D + M+ I N D G++ +G I+GEYGINIA + R++ E
Sbjct: 438 NNEGRIIDFFGYKVDFKPEKYMLLIQNIDKPGMIGRIGTIVGEYGINIATMQVSRNKKGE 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ IDG++ + +EKL I V
Sbjct: 498 KAVMVCEIDGALPDEAVEKLKNTDGILRV 526
>gi|226312009|ref|YP_002771903.1| D-3-phosphoglycerate dehydrogenase [Brevibacillus brevis NBRC
100599]
gi|226094957|dbj|BAH43399.1| D-3-phosphoglycerate dehydrogenase [Brevibacillus brevis NBRC
100599]
Length = 527
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ R +KI + DV ++ I + D G++ VG+ILGE +NIA +GR
Sbjct: 433 NGYGARIVKIDDFAIDVAPEGYLLYIHHNDRPGVIGRVGSILGENSVNIATMQVGRRDIG 492
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L +D + +L+ + ++ V Q E
Sbjct: 493 GDAIMMLSVDKPLTPELLDTMGELAEVKSVTQIEL 527
>gi|297622551|ref|YP_003703985.1| D-3-phosphoglycerate dehydrogenase [Truepera radiovictrix DSM
17093]
gi|297163731|gb|ADI13442.1| D-3-phosphoglycerate dehydrogenase [Truepera radiovictrix DSM
17093]
Length = 524
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 38/87 (43%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+PR + + E ++ M+ N D G V VG +LG+ G+NI+ L R
Sbjct: 430 GTEPRIVSVDEYPIELRPEGTMLICTNYDRPGAVGKVGTVLGDAGVNISGMQLSRVGENG 489
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIR 90
A+ L +D SVLE L +
Sbjct: 490 LALFALGLDQEPPESVLEVLRSLPNVL 516
>gi|312878276|ref|ZP_07738197.1| D-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor
lactoaceticus 6A]
gi|311794944|gb|EFR11352.1| D-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 531
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + R I D + M+ I N D G++ +G I+GEYGINIA + R++ E
Sbjct: 438 NNEGRIIDFFGYKVDFKPEKYMLLIQNIDKPGMIGRIGTIVGEYGINIATMQVSRNKKGE 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ IDG++ + +EKL I V
Sbjct: 498 KAVMVCEIDGALPDEAVEKLKNTDGILRV 526
>gi|317121362|ref|YP_004101365.1| D-3-phosphoglycerate dehydrogenase [Thermaerobacter marianensis DSM
12885]
gi|315591342|gb|ADU50638.1| D-3-phosphoglycerate dehydrogenase [Thermaerobacter marianensis DSM
12885]
Length = 571
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG PR + + + D+ ++ + D G++ VG++LG INIA + R Q
Sbjct: 443 DGLPRLVHLDGLPLDMVPAPRLLLTRHHDRPGMIGKVGSLLGAREINIAAMQVARRQVRG 502
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
AI L +D + ++L ++ + + +
Sbjct: 503 EAIMVLALDDPVPAALLAEIRRLPGMEEARLVQ 535
>gi|302390824|ref|YP_003826644.1| D-3-phosphoglycerate dehydrogenase [Acetohalobium arabaticum DSM
5501]
gi|302202901|gb|ADL11579.1| D-3-phosphoglycerate dehydrogenase [Acetohalobium arabaticum DSM
5501]
Length = 527
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF D R ++I + ++ + D G+V +G +LGE INIA+ LGR
Sbjct: 431 VFDDTDLRIVEINGYRVNAISEGNLLITNHTDKPGVVGKIGTLLGENDINIANMQLGRHD 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ + ID + + V EKL I +K+
Sbjct: 491 AGGEAVMVMGIDNELNSEVKEKLLTIDGISDIKEVNL 527
>gi|320101741|ref|YP_004177332.1| D-3-phosphoglycerate dehydrogenase [Isosphaera pallida ATCC 43644]
gi|319749023|gb|ADV60783.1| D-3-phosphoglycerate dehydrogenase [Isosphaera pallida ATCC 43644]
Length = 544
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 43/97 (44%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + R + + D D+ +M+ + D G++ +G ++G + +NIA ++GR+
Sbjct: 437 LFGRQRMRLVGLGPYQIDCDLEGVMLIFTHLDRPGLIGSIGTLMGNHNVNIAQMNVGRAV 496
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI + +D LE L + V +
Sbjct: 497 KGGEAIGVVNLDSIPPEEALEALRALPDLYSVTVIQL 533
>gi|33240885|ref|NP_875827.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|33238414|gb|AAQ00480.1| D-3-phosphoglycerate dehydrogenase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 528
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V +DG+ R I E +V R M+ + D+ GI+ +G++LG + +NIA +GR
Sbjct: 432 VLADGELRISSIDEFPINVSPSRYMLFTRHRDMPGIIGKLGSLLGTHNVNIAAMQVGRRI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I + +L + I F
Sbjct: 492 VRGEAVMVLSIDDPIPSELLTSILAVEGINQAHAVTF 528
>gi|150402759|ref|YP_001330053.1| D-3-phosphoglycerate dehydrogenase [Methanococcus maripaludis C7]
gi|150033789|gb|ABR65902.1| D-3-phosphoglycerate dehydrogenase [Methanococcus maripaludis C7]
Length = 523
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 47/93 (50%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
+ F +I D+ + I + D G+V VG +LGE+GINIA +GR + H
Sbjct: 431 NEIVFREINGYRMDIKPEGTICIIKHIDRPGMVGKVGVLLGEHGINIAGMQVGRREPGGH 490
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+I FL +D I + V+E++ +R VK
Sbjct: 491 SIMFLDVDHMISDDVMEEIQKIENVRAVKSINI 523
>gi|260574246|ref|ZP_05842251.1| D-3-phosphoglycerate dehydrogenase [Rhodobacter sp. SW2]
gi|259023712|gb|EEW27003.1| D-3-phosphoglycerate dehydrogenase [Rhodobacter sp. SW2]
Length = 531
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 43/98 (43%), Positives = 61/98 (62%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D +IGR M+ N D+ GI+ +G +G+ +NIA+F LGRS
Sbjct: 433 FSDGKPRFIQIKGINIDAEIGRHMLYTTNEDVPGIIGLLGMTMGKNSVNIANFTLGRSGV 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D I V++ L + VK EF+V
Sbjct: 493 GQDAIAILYLDQRIDPKVVDTLESTGLFQQVKALEFDV 530
>gi|221314548|ref|ZP_03596353.1| D-3-phosphoglycerate dehydrogenase [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|255767495|ref|NP_390188.2| D-3-phosphoglycerate dehydrogenase [Bacillus subtilis subsp.
subtilis str. 168]
gi|321311779|ref|YP_004204066.1| D-3-phosphoglycerate dehydrogenase [Bacillus subtilis BSn5]
gi|251757445|sp|P35136|SERA_BACSU RecName: Full=D-3-phosphoglycerate dehydrogenase; Short=PGDH
gi|225185123|emb|CAB14239.2| 3-phosphoglycerate dehydrogenase [Bacillus subtilis subsp. subtilis
str. 168]
gi|291484735|dbj|BAI85810.1| D-3-phosphoglycerate dehydrogenase [Bacillus subtilis subsp. natto
BEST195]
gi|320018053|gb|ADV93039.1| D-3-phosphoglycerate dehydrogenase [Bacillus subtilis BSn5]
Length = 525
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + R ++I N D ++ I + D G++ VG ILG+ INIA +GR +
Sbjct: 432 FGE---RIVEINGFNIDFYPTGHLVYIQHQDTTGVIGRVGRILGDNDINIATMQVGRKEK 488
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L D + + ++++L+ I VK +
Sbjct: 489 GGEAIMMLSFDRHLEDKIVKELTNVPDIVSVKLIDL 524
>gi|221310225|ref|ZP_03592072.1| D-3-phosphoglycerate dehydrogenase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221319470|ref|ZP_03600764.1| D-3-phosphoglycerate dehydrogenase [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323746|ref|ZP_03605040.1| D-3-phosphoglycerate dehydrogenase [Bacillus subtilis subsp.
subtilis str. SMY]
Length = 525
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + R ++I N D ++ I + D G++ VG ILG+ INIA +GR +
Sbjct: 432 FGE---RIVEINGFNIDFYPTGHLVYIQHQDTTGVIGRVGRILGDNDINIATMQVGRKEK 488
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L D + + ++++L+ I VK +
Sbjct: 489 GGEAIMMLSFDRHLEDKIVKELTNVPDIVSVKLIDL 524
>gi|1146196|gb|AAC83943.1| phosphoglycerate dehydrogenase [Bacillus subtilis subsp. subtilis
str. 168]
Length = 525
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + R ++I N D ++ I + D G++ VG ILG+ INIA +GR +
Sbjct: 432 FGE---RIVEINGFNIDFYPTGHLVYIQHQDTTGVIGRVGRILGDNDINIATMQVGRKEK 488
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L D + + ++++L+ I VK +
Sbjct: 489 GGEAIMMLSFDRHLEDKIVKELTNVPDIVSVKLIDL 524
>gi|196233471|ref|ZP_03132314.1| D-3-phosphoglycerate dehydrogenase [Chthoniobacter flavus Ellin428]
gi|196222467|gb|EDY16994.1| D-3-phosphoglycerate dehydrogenase [Chthoniobacter flavus Ellin428]
Length = 530
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 47/96 (48%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F PR +K+ + + ++ N D G+V VG +LG++ +NIA L R++
Sbjct: 435 FFGTTPRIVKVNGRHVEAKPEGVLFLFENRDRPGVVGHVGTLLGKHKVNIAGMSLSRNEE 494
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ L +D +++++L+ I V+ +
Sbjct: 495 GGEALTLLNLDSVPSEAIIKELTAGGDIHSVQVVQL 530
>gi|114800302|ref|YP_761802.1| D-3-phosphoglycerate dehydrogenase [Hyphomonas neptunium ATCC
15444]
gi|114740476|gb|ABI78601.1| D-3-phosphoglycerate dehydrogenase [Hyphomonas neptunium ATCC
15444]
Length = 531
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 54/93 (58%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
GKPR ++++ + + D + + + N D G + +G +LGE +NIA FHLGR ++
Sbjct: 439 GKPRIVEVKGMALEGDFSPVTLYVNNIDKPGFIGALGQMLGEAKVNIATFHLGRQEAGGE 498
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + ID + S++EKL +R+VK F
Sbjct: 499 AIALIGIDSTPPASLVEKLDALPQVRYVKVLSF 531
>gi|302384761|ref|YP_003820583.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium saccharolyticum WM1]
gi|302195389|gb|ADL02960.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium saccharolyticum WM1]
Length = 222
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK + I+I I+ D + I + D G+V ++ L E +NIA L R +
Sbjct: 128 GGGKVKIIRINGIDVDFTGEYSTLVIRHLDYPGMVAYIATSLSERNVNIAFMRLFRERKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A S + D I +LEKL + + V +
Sbjct: 188 ATAYSVVESDEEIPQELLEKLREHPKVEDVMLIQ 221
>gi|322419774|ref|YP_004198997.1| D-3-phosphoglycerate dehydrogenase [Geobacter sp. M18]
gi|320126161|gb|ADW13721.1| D-3-phosphoglycerate dehydrogenase [Geobacter sp. M18]
Length = 532
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G PR +K+++ D M+ + AD GI+ +G ILG++ INIA +LGR +
Sbjct: 435 EGIPRIVKLRDYQMDFRPEEHMLLLAYADRPGIIGKIGTILGKHEINIASMNLGRREKKG 494
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ L +D ++ V+E++ F+K
Sbjct: 495 EAMVILSLDSAVPADVVEEVREATDATFIKPL 526
>gi|23100081|ref|NP_693547.1| D-3-phosphoglycerate dehydrogenase [Oceanobacillus iheyensis
HTE831]
gi|22778312|dbj|BAC14582.1| phosphoglycerate dehydrogenase [Oceanobacillus iheyensis HTE831]
Length = 528
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 45/97 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + PR +++ E D+ M+ I + D G++ +G+ + ++ INIA + RS
Sbjct: 432 LLNGLGPRLVRVDEYRVDITPEGHMVVIQHRDQPGVIGRMGSTIAKHDINIATMQVDRSD 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L ID + + L ++ I+ V +
Sbjct: 492 IGGDAIMILTIDRHLADEALNEIESLDEIKSVTAIDL 528
>gi|45359151|ref|NP_988708.1| D-3-phosphoglycerate dehydrogenase [Methanococcus maripaludis S2]
gi|45048026|emb|CAF31144.1| D-3-phosphoglycerate dehydrogenase [Methanococcus maripaludis S2]
Length = 523
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 46/93 (49%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
+ F +I D+ + I + D G+V VG +LGE+GINIA +GR + H
Sbjct: 431 NEVVFREINGYRMDIKPEGTICIIKHIDRPGMVGKVGVLLGEHGINIAGMQVGRREPGGH 490
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+I FL ID I + VL+++ +R K
Sbjct: 491 SIMFLDIDHMISDEVLDEIRKMENVRAAKSINI 523
>gi|114769879|ref|ZP_01447489.1| D-3-phosphoglycerate dehydrogenase [alpha proteobacterium HTCC2255]
gi|114549584|gb|EAU52466.1| D-3-phosphoglycerate dehydrogenase [alpha proteobacterium HTCC2255]
Length = 529
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/99 (40%), Positives = 59/99 (59%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D ++G M+ N DI GI+ +G +GEY +NIA+F LGR
Sbjct: 431 VFSDGKPRFIQIKGINIDAEVGSHMLYTTNKDIPGIIGTLGQTMGEYDVNIANFTLGRKN 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + + ++ L + V +F V
Sbjct: 491 TGGDAIALLYLDCAPNQNAMDSLQKTGIFQTVSALKFEV 529
>gi|123966748|ref|YP_001011829.1| D-3-phosphoglycerate dehydrogenase [Prochlorococcus marinus str.
MIT 9515]
gi|123201114|gb|ABM72722.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Prochlorococcus
marinus str. MIT 9515]
Length = 528
Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+DG+ R I I + +V R M+ + D+ GI+ +G++LG++ +NIA +GR
Sbjct: 432 IFADGELRIISIDQYPVNVSPSRFMLITRHRDMPGIIGKLGSLLGDHNVNIASMQVGRKI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I ++LE + I
Sbjct: 492 VRGEAVMVLSIDDPIPTNLLESILEVEGITSSDPVTL 528
>gi|328552773|gb|AEB23265.1| D-3-phosphoglycerate dehydrogenase [Bacillus amyloliquefaciens
TA208]
gi|328912429|gb|AEB64025.1| 3-phosphoglycerate dehydrogenase [Bacillus amyloliquefaciens LL3]
Length = 525
Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + R +++ N D+ ++ I + D G++ VG ILG+ INIA +GR +
Sbjct: 432 FGE---RIVELNGFNIDLHPAGHLVYIQHQDTTGVIGRVGRILGDNDINIATMQVGRKEK 488
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L D + + V+ +L+ I VK +
Sbjct: 489 GGEAIMMLSFDKHLDDKVVNELASIQDIVSVKLIDL 524
>gi|33861910|ref|NP_893471.1| D-3-phosphoglycerate dehydrogenase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33640278|emb|CAE19813.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 528
Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+DG+ R I I + +V R M+ + D+ GI+ +G++LG++ +NIA +GR
Sbjct: 432 IFADGELRIISIDQYPVNVSPSRFMLITRHRDMPGIIGKLGSLLGDHNVNIASMQVGRKI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I ++LE + I
Sbjct: 492 VRGEAVMVLSIDDPIPTNLLESILEVEGITSSDPVTL 528
>gi|328952982|ref|YP_004370316.1| D-3-phosphoglycerate dehydrogenase [Desulfobacca acetoxidans DSM
11109]
gi|328453306|gb|AEB09135.1| D-3-phosphoglycerate dehydrogenase [Desulfobacca acetoxidans DSM
11109]
Length = 526
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 39/97 (40%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F +PR ++I + M+ I N D G++ +G +G + INIA +G+ +
Sbjct: 430 IFGRYEPRLVRINAFRLEAVPEGHMLFIYNTDRPGVIGAIGTTIGNHKINIARMTVGQEK 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
I L D S+ L + + E
Sbjct: 490 ERGQNIILLTTDTSVTPECLADVRALPHVASAHPLEL 526
>gi|303244898|ref|ZP_07331224.1| D-3-phosphoglycerate dehydrogenase [Methanothermococcus okinawensis
IH1]
gi|302484715|gb|EFL47653.1| D-3-phosphoglycerate dehydrogenase [Methanothermococcus okinawensis
IH1]
Length = 523
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 47/94 (50%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P +I D+ ++ I + D G+V VG +LG+YG+NIA +GR +
Sbjct: 430 DGNPVLREINGYKVDIKPEGIICVIKHIDRPGMVGKVGLLLGDYGVNIAGMQVGRKEPGG 489
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+I L +D I + V+EKL I+ K +
Sbjct: 490 ESIMVLNVDHMIPDEVIEKLKKLENIKDAKIIDL 523
>gi|87301209|ref|ZP_01084050.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Synechococcus
sp. WH 5701]
gi|87284177|gb|EAQ76130.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Synechococcus
sp. WH 5701]
Length = 528
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 46/97 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DG R I E +V R M+ + D+ GI+ +G++LGE+ +NIA +GR
Sbjct: 432 VFADGDLRITTIDEFPVNVMPTRHMLITRHRDMPGIIGNIGSLLGEHNVNIASMQVGRRI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D I S+L + I+
Sbjct: 492 VRGDAVMVLSLDDPIPPSLLISIHGINGIQEAHPVTL 528
>gi|284163372|ref|YP_003401651.1| D-3-phosphoglycerate dehydrogenase [Haloterrigena turkmenica DSM
5511]
gi|284013027|gb|ADB58978.1| D-3-phosphoglycerate dehydrogenase [Haloterrigena turkmenica DSM
5511]
Length = 528
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 43/98 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+ PR +++ D M+ N D G++ +G+++G++ +NIA R
Sbjct: 428 LFAGDDPRIVRVDGYRVDAIPHGKMVVTRNTDEPGVIGLIGSVMGDHDVNIAGMFNARET 487
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A++ +D I + E+L + I + N
Sbjct: 488 IGGEALTVYNVDSEIPDGAREELEADERIIGLNYITLN 525
>gi|253576381|ref|ZP_04853711.1| phosphoglycerate dehydrogenase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844274|gb|EES72292.1| phosphoglycerate dehydrogenase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 529
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 46/97 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + R ++I + DV +I I + D GI+ VG +LG+ +NIA +GR
Sbjct: 432 LLNGYGARIVQIDKFPVDVAPEGHLIFISHNDKPGIIGHVGTLLGKNVVNIASMQVGRKL 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L +D ++ VL++L+ I + F
Sbjct: 492 VGGEAIMVLTVDKAVTKEVLDELTKLPEINKAQHIIF 528
>gi|304319942|ref|YP_003853585.1| putative phosphoglycerate dehydrogenase [Parvularcula bermudensis
HTCC2503]
gi|303298845|gb|ADM08444.1| putative phosphoglycerate dehydrogenase [Parvularcula bermudensis
HTCC2503]
Length = 527
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 45/94 (47%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G+PR ++I + + + M+ + N D G + +G +L INIA F+LGR+
Sbjct: 434 GGEPRAVRIGNVRLESNFAPHMLYVQNKDKPGFIGNLGKLLSSKDINIATFNLGRAAPGG 493
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A + L +D + + L+ LS I + F
Sbjct: 494 TAYALLAVDQPLDDDTLKALSDLPQIDEARMLSF 527
>gi|308174098|ref|YP_003920803.1| 3-phosphoglycerate dehydrogenase [Bacillus amyloliquefaciens DSM 7]
gi|307606962|emb|CBI43333.1| 3-phosphoglycerate dehydrogenase [Bacillus amyloliquefaciens DSM 7]
Length = 525
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + R +++ N D+ ++ I + D G++ VG ILG+ INIA +GR +
Sbjct: 432 FGE---RIVELNGFNIDLHPAGHLVYIQHQDTTGVIGRVGRILGDNDINIATMQVGRKEK 488
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L D + + V+ +L+ I VK +
Sbjct: 489 GGEAIMMLSFDKHLDDKVVNELASIQDIVSVKLIDL 524
>gi|154686553|ref|YP_001421714.1| D-3-phosphoglycerate dehydrogenase [Bacillus amyloliquefaciens
FZB42]
gi|154352404|gb|ABS74483.1| SerA [Bacillus amyloliquefaciens FZB42]
Length = 525
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + R +++ N D++ ++ I + D G++ VG ILG+ INIA +GR +
Sbjct: 432 FGE---RIVELNGFNIDLNPAGHLVYIQHQDTTGVIGRVGRILGDNDINIATMQVGRKEK 488
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L D + + V+ +L+ I VK +
Sbjct: 489 GGEAIMMLSFDKHLDDKVVNELTSIQDIVSVKLIDL 524
>gi|15678988|ref|NP_276105.1| D-3-phosphoglycerate dehydrogenase [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3122860|sp|O27051|SERA_METTH RecName: Full=D-3-phosphoglycerate dehydrogenase; Short=PGDH
gi|2622068|gb|AAB85466.1| phosphoglycerate dehydrogenase [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 525
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 41/92 (44%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+P I I DV MI D+ G + +G LG++GINIA +GR + A
Sbjct: 434 EPTIIGINGYRVDVKPEGTMIIARYRDLPGTIGAIGTKLGQHGINIATMQVGRKEIGGEA 493
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ L +D S+ V+E++ + E
Sbjct: 494 VMVLKVDQSVPAEVIEEVKKLDNVDDAVAIEI 525
>gi|308234584|ref|ZP_07665321.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Atopobium vaginae DSM 15829]
Length = 517
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ R I I+ ++ + + + D+ G++ + IL Y INIA R++
Sbjct: 115 GGGRIRISSIDGISVEITGDYPTLFVAHQDVAGVLAALTGILSTYEINIATMRTFRAKRG 174
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A + +D + +L +L + V
Sbjct: 175 GKAYTVFEVDNPLQGDLLTRLRNVEHVHLVNTVNI 209
>gi|328944373|ref|ZP_08241836.1| L-serine ammonia-lyase beta subunit [Atopobium vaginae DSM 15829]
gi|327491088|gb|EGF22864.1| L-serine ammonia-lyase beta subunit [Atopobium vaginae DSM 15829]
Length = 530
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ R I I+ ++ + + + D+ G++ + IL Y INIA R++
Sbjct: 128 GGGRIRISSIDGISVEITGDYPTLFVAHQDVAGVLAALTGILSTYEINIATMRTFRAKRG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A + +D + +L +L + V
Sbjct: 188 GKAYTVFEVDNPLQGDLLTRLRNVEHVHLVNTVNI 222
>gi|253700874|ref|YP_003022063.1| D-3-phosphoglycerate dehydrogenase [Geobacter sp. M21]
gi|251775724|gb|ACT18305.1| D-3-phosphoglycerate dehydrogenase [Geobacter sp. M21]
Length = 532
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 47/92 (51%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G PR +K+++ D M+ + D GI+ +G ILG + INIA +LGR +
Sbjct: 435 EGIPRIVKLRDYQMDFRPEEHMLLMAYGDRPGIIGKIGTILGTHEINIASMNLGRREKKG 494
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ L +D ++ V+E++ FVK
Sbjct: 495 EAMVILSLDSAVTPEVVEEVRGATDATFVKPL 526
>gi|229543101|ref|ZP_04432161.1| D-3-phosphoglycerate dehydrogenase [Bacillus coagulans 36D1]
gi|229327521|gb|EEN93196.1| D-3-phosphoglycerate dehydrogenase [Bacillus coagulans 36D1]
Length = 541
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F R +K+ + D+ + ++ I + DI G++ VG+ILG NI +GR +
Sbjct: 435 FGG---RIVKLNDYRVDLRPEQHLLYIRHLDIPGMIGQVGSILGSNDTNIGTMQVGRKEI 491
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L +D + VL++L + I+ V+ E
Sbjct: 492 GGEAIMVLTLDKTASRQVLDQLKEVIGIKAVQTLEL 527
>gi|296445352|ref|ZP_06887310.1| D-3-phosphoglycerate dehydrogenase [Methylosinus trichosporium
OB3b]
gi|296257113|gb|EFH04182.1| D-3-phosphoglycerate dehydrogenase [Methylosinus trichosporium
OB3b]
Length = 528
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 44/97 (45%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF D +PR + I + + MI + N D G + +LGE G+NIA LGR +
Sbjct: 432 VFHDDEPRIVAIDGVRLETAFAPRMIFVSNEDRPGFMGLFAGLLGEAGVNIATCALGRDR 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A + + +D + +++ +RF EF
Sbjct: 492 PGGSARALVGVDEPAPERAMARIAALPGVRFAAALEF 528
>gi|221633751|ref|YP_002522977.1| D-3-phosphoglycerate dehydrogenase [Thermomicrobium roseum DSM
5159]
gi|221157124|gb|ACM06251.1| phosphoglycerate dehydrogenase SerA [Thermomicrobium roseum DSM
5159]
Length = 745
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 37/89 (41%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+++ + + + M+ + D GI+ +G ILG Y +NIA +GR AI
Sbjct: 633 IMEVDRFSLERPLAGHMLITHHLDRPGIIGRIGTILGRYEVNIAGMQVGRRARGGEAIMV 692
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D I + L ++ +
Sbjct: 693 LNVDDPIPEAALNEILQIPDVWTAYVVSL 721
>gi|77918032|ref|YP_355847.1| D-3-phosphoglycerate dehydrogenase [Pelobacter carbinolicus DSM
2380]
gi|77544115|gb|ABA87677.1| D-3-phosphoglycerate dehydrogenase [Pelobacter carbinolicus DSM
2380]
Length = 534
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 50/94 (53%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G+PR +++++ D M+ I D G++ +G ILGE+ INIA +LGR +
Sbjct: 434 EGQPRIVRLRDYQVDFAPEEHMLVITYRDQPGMIGKIGQILGEHDINIAAMNLGRQEKLG 493
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D ++ + V+ ++ V F+K
Sbjct: 494 EAMVILSLDSAVASHVVAEIGSVVDATFIKYLHL 527
>gi|84514603|ref|ZP_01001967.1| D-3-phosphoglycerate dehydrogenase [Loktanella vestfoldensis SKA53]
gi|84511654|gb|EAQ08107.1| D-3-phosphoglycerate dehydrogenase [Loktanella vestfoldensis SKA53]
Length = 530
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/99 (38%), Positives = 61/99 (61%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+DGKPRFI+I+ IN D ++G M+ N D+ GI+ +G+ILG +NIA+F LGR++
Sbjct: 432 VFNDGKPRFIQIKGINIDAEVGENMVYTTNNDVPGIIGVLGSILGTNSVNIANFTLGRAE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ AI+ L +D + + +L + VK F++
Sbjct: 492 AKGEAIALLYLDEPLPAKAVAELEGTGKFKQVKPLRFDI 530
>gi|197123004|ref|YP_002134955.1| D-3-phosphoglycerate dehydrogenase [Anaeromyxobacter sp. K]
gi|196172853|gb|ACG73826.1| D-3-phosphoglycerate dehydrogenase [Anaeromyxobacter sp. K]
Length = 528
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 42/97 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V+ + R +++ + +I N D G+V +G LG G+NIA L R
Sbjct: 432 VYGKREARLVRVDGFRLEAVPEGHVILCENDDAPGVVGNLGTALGAAGVNIARISLSRLD 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A +FL +D + VLE++ +R V+
Sbjct: 492 DHSRAFAFLNVDSAPAPGVLEQVRRLPHVRAVRSIHL 528
>gi|218781218|ref|YP_002432536.1| D-3-phosphoglycerate dehydrogenase [Desulfatibacillum alkenivorans
AK-01]
gi|218762602|gb|ACL05068.1| D-3-phosphoglycerate dehydrogenase [Desulfatibacillum alkenivorans
AK-01]
Length = 526
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 43/97 (44%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
++ +P+ ++I ++ ++ I N D G + VG++LGE +NIA +G+ +
Sbjct: 430 IYGKAEPKIVRIDSFRVEMVPEGHVLLIHNVDKPGAIGSVGSMLGEASVNIARMQVGQEE 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ D + V+ KL ++ V E
Sbjct: 490 DGNRNFIVMETDTETPDDVVAKLRELPLVKSVITVEL 526
>gi|220917793|ref|YP_002493097.1| D-3-phosphoglycerate dehydrogenase [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955647|gb|ACL66031.1| D-3-phosphoglycerate dehydrogenase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 528
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 42/97 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V+ + R +++ + +I N D G+V +G LG G+NIA L R
Sbjct: 432 VYGKREARLVRVDGFRLEAVPEGHVILCENDDAPGVVGNLGTALGAAGVNIARISLSRLD 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A +FL +D + VLE++ +R V+
Sbjct: 492 DHSRAFAFLNVDSAPAPGVLEQVRRLPHVRTVRSIHL 528
>gi|308274573|emb|CBX31172.1| D-3-phosphoglycerate dehydrogenase [uncultured Desulfobacterium
sp.]
Length = 526
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 41/97 (42%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F PR ++I ++ + + N D G + +G +LG INI +G+ +
Sbjct: 430 IFGKKDPRIVRINNFRLEMHPSGHLALVHNLDKPGAIGSIGTVLGRNSINIGRMQVGQEE 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
E I L D I VLE+L ++ V E
Sbjct: 490 EGERNIILLKTDLPIPEPVLEELKALPLVKTVTLLEL 526
>gi|295706456|ref|YP_003599531.1| D-3-phosphoglycerate dehydrogenase [Bacillus megaterium DSM 319]
gi|294804115|gb|ADF41181.1| D-3-phosphoglycerate dehydrogenase [Bacillus megaterium DSM 319]
Length = 524
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 45/95 (47%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ PR + I + D ++ I ++D G++ VG +LG+ INIA +GR Q
Sbjct: 430 AGYGPRIVNIDSFDIDFYPEGHLLYIRHSDQPGVIGNVGKVLGDLRINIATMQVGRKQKG 489
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L D + +SV+ L I +++ E
Sbjct: 490 GEAIMMLTFDKLLDDSVIASLKQTSEIVTIQRIEL 524
>gi|86157688|ref|YP_464473.1| D-3-phosphoglycerate dehydrogenase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774199|gb|ABC81036.1| D-3-phosphoglycerate dehydrogenase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 528
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 42/97 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V+ + R +++ + +I N D G+V +G LG G+NIA L R
Sbjct: 432 VYGKREARLVRVDGFRLEAVPEGHVILCENDDAPGVVGNLGTALGAAGVNIARISLSRLD 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A +FL +D + VLE++ +R V+
Sbjct: 492 DHSRAFAFLNVDSAPAPGVLEQVRRLPHVRAVRSIHL 528
>gi|148654451|ref|YP_001274656.1| D-3-phosphoglycerate dehydrogenase [Roseiflexus sp. RS-1]
gi|148566561|gb|ABQ88706.1| D-3-phosphoglycerate dehydrogenase [Roseiflexus sp. RS-1]
Length = 524
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 38/93 (40%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G+P ++ M+ + D G++ VG +LGE +NIA +GR E
Sbjct: 432 GEPHVVEADGFWVTFVPEGPMLFTYHRDRPGMIGKVGTLLGEADVNIASMDVGRLAPREQ 491
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + V+ +L I+
Sbjct: 492 AMMVLRLDDPVPPHVIARLREEPDIQHATTLII 524
>gi|224476814|ref|YP_002634420.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421421|emb|CAL28235.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 530
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 47/97 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V + PR ++I + D + I + D GIV G ILGEY INIA HLGR++
Sbjct: 432 VLNGYGPRIVRINDYPVDFKPAEYQLIINHTDRPGIVGRTGQILGEYDINIASMHLGRAE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ + +D ++ +++ L + ++ +
Sbjct: 492 EGGDAMMIISVDHTVSEDIIKALFQIDGFKNIQFVDL 528
>gi|197118344|ref|YP_002138771.1| D-3-phosphoglycerate dehydrogenase [Geobacter bemidjiensis Bem]
gi|197087704|gb|ACH38975.1| D-3-phosphoglycerate dehydrogenase [Geobacter bemidjiensis Bem]
Length = 532
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 47/92 (51%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G PR +K+++ D M+ + D GI+ +G ILG + INIA +LGR +
Sbjct: 435 EGIPRIVKLRDYQMDFRPEEHMLLMAYGDRPGIIGKIGTILGTHEINIASMNLGRREKKG 494
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ L +D ++ V+E++ FVK
Sbjct: 495 EAMVILSLDSAVTPEVVEEVRGATDATFVKPL 526
>gi|113477612|ref|YP_723673.1| D-3-phosphoglycerate dehydrogenase [Trichodesmium erythraeum
IMS101]
gi|110168660|gb|ABG53200.1| D-3-phosphoglycerate dehydrogenase [Trichodesmium erythraeum
IMS101]
Length = 527
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + R I +V M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 431 LLGKDEIRITNIDGFPINVPPSPYMLLTLHRDMPGIIGKIGSLLGSFNVNIASMQVGRKI 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D + +L ++ IR
Sbjct: 491 VRGDAVMVLSVDDPLPEEILTEILKEPGIRNA 522
>gi|170077862|ref|YP_001734500.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. PCC 7002]
gi|169885531|gb|ACA99244.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. PCC 7002]
Length = 525
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 44/92 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ SDG R I +V M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 429 LLSDGDIRITSINGFPINVPPTGYMLFTLHRDVPGIIGKIGSLLGSFNVNIASMQVGRKI 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D + VL +++ IR
Sbjct: 489 VRGDAVMVLSLDDPLPEGVLSEITKVTGIRDA 520
>gi|254526871|ref|ZP_05138923.1| phosphoglycerate dehydrogenase [Prochlorococcus marinus str. MIT
9202]
gi|221538295|gb|EEE40748.1| phosphoglycerate dehydrogenase [Prochlorococcus marinus str. MIT
9202]
Length = 528
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 46/97 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+DG+ + + I + +V R M+ + D+ GI+ +G++LG +NIA +GR
Sbjct: 432 IFADGELKIMSIDQYPVNVSPSRYMLVTRHRDMPGIIGKLGSLLGSNNVNIASMQVGRKI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I N +L+ + I
Sbjct: 492 VRGEAVMVLSIDDPIPNKLLDTIIEVEGITNANPVTL 528
>gi|56752495|ref|YP_173196.1| D-3-phosphoglycerate dehydrogenase [Synechococcus elongatus PCC
6301]
gi|81300310|ref|YP_400518.1| D-3-phosphoglycerate dehydrogenase [Synechococcus elongatus PCC
7942]
gi|56687454|dbj|BAD80676.1| D-3-phosphoglycerate dehydrogenase [Synechococcus elongatus PCC
6301]
gi|81169191|gb|ABB57531.1| D-3-phosphoglycerate dehydrogenase [Synechococcus elongatus PCC
7942]
Length = 546
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ DG+ R + E +V R M+ + D+ GI+ +G++LG + +NIA +GR
Sbjct: 450 LLGDGEIRITNVDEFPVNVPPSRYMLFTRHRDMPGIIGKIGSLLGSFNVNIASMQVGRRI 509
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D + +L +++ I
Sbjct: 510 VRGDAVMVLSLDDPLPEGILAEITKVAGISDA 541
>gi|78223581|ref|YP_385328.1| D-3-phosphoglycerate dehydrogenase [Geobacter metallireducens
GS-15]
gi|78194836|gb|ABB32603.1| D-3-phosphoglycerate dehydrogenase [Geobacter metallireducens
GS-15]
Length = 541
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 47/94 (50%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G PR +K+++ D M+ + D G++ +G I+G + INIA +LGR +
Sbjct: 435 EGSPRIVKLRDYQVDFAPDEHMLSLTYEDRPGMIGKIGTIMGAHDINIASMNLGRREKRG 494
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D ++ V+E++ F+K
Sbjct: 495 EAMVILSLDSAVPPFVVEEVRKATDATFIKPIHM 528
>gi|154151703|ref|YP_001405321.1| D-3-phosphoglycerate dehydrogenase [Candidatus Methanoregula boonei
6A8]
gi|154000255|gb|ABS56678.1| D-3-phosphoglycerate dehydrogenase [Methanoregula boonei 6A8]
Length = 534
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 42/92 (45%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF G+ R + + + D+ +I + D G++ ILG+ INIA +GR
Sbjct: 433 VFVKGRSRIVSVDKYTMDLIPEGYVIVSRHLDKPGVIGRASTILGKCNINIAGMQVGRIN 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ E A+ L +D + V++++ I
Sbjct: 493 AGEEALMVLNVDSEVPEDVMKEIRSMPGIFSA 524
>gi|304315109|ref|YP_003850256.1| phosphoglycerate dehydrogenase [Methanothermobacter marburgensis
str. Marburg]
gi|302588568|gb|ADL58943.1| phosphoglycerate dehydrogenase [Methanothermobacter marburgensis
str. Marburg]
Length = 525
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 41/92 (44%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+P I I DV MI D+ G + +G LGE+ INIA +GR + A
Sbjct: 434 EPTIIGINGYRVDVKPEGTMIIARYRDLPGTIGAIGTKLGEHQINIATMQVGRKEIGGEA 493
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ L +D S+ + V++++ + E
Sbjct: 494 VMVLKVDQSVPSEVIDEVKKLDNVDDAVAIEI 525
>gi|283782491|ref|YP_003373246.1| D-3-phosphoglycerate dehydrogenase [Pirellula staleyi DSM 6068]
gi|283440944|gb|ADB19386.1| D-3-phosphoglycerate dehydrogenase [Pirellula staleyi DSM 6068]
Length = 542
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + PR I++ + + + ++ + D+ GI+ VG I G + +NI +GR+
Sbjct: 432 LFGNNMPRLIRLGDYRLEAYLDGNLLIFTHHDVPGIIGAVGTIFGNHKVNIGQMSVGRAG 491
Query: 61 --STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + ++++ + I+ VK E
Sbjct: 492 IIPGGGAVGVLNLDNVPPQAAIDEVQQHPDIQSVKIIEL 530
>gi|157413916|ref|YP_001484782.1| D-3-phosphoglycerate dehydrogenase [Prochlorococcus marinus str.
MIT 9215]
gi|157388491|gb|ABV51196.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Prochlorococcus
marinus str. MIT 9215]
Length = 528
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 46/97 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+DG+ + + I + +V R M+ + D+ GI+ +G++LG +NIA +GR
Sbjct: 432 IFADGELKIMSIDQYPVNVSPSRYMLVTRHRDMPGIIGKLGSLLGSNNVNIASMQVGRKI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I N +L+ + I
Sbjct: 492 VRGEAVMVLSIDDPIPNKLLDTIIEVEGITNANPVTL 528
>gi|257437689|ref|ZP_05613444.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Faecalibacterium prausnitzii A2-165]
gi|257199996|gb|EEU98280.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Faecalibacterium prausnitzii A2-165]
Length = 227
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 38/96 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ R +I + D + I N D G + V L IN+A + R+ +
Sbjct: 124 GGGRIRVTEIDGVPADFGGDSNTLIIHNEDTPGCIAEVTTCLAVRRINVASMQVFRAGTG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
+A+ L D I + + +KL+ I V +
Sbjct: 184 GYAVMVLECDSHIPHPLEQKLATLPGILKVTCLNID 219
>gi|254412600|ref|ZP_05026373.1| D-3-phosphoglycerate dehydrogenase [Microcoleus chthonoplastes PCC
7420]
gi|196180335|gb|EDX75326.1| D-3-phosphoglycerate dehydrogenase [Microcoleus chthonoplastes PCC
7420]
Length = 527
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 45/92 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ SDG+ I E +V M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 431 LLSDGEIHITSIDEFPINVPPSHHMLFTLHRDMPGIIGKIGSLLGSFNVNIASMQVGRKI 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID + +L +++ IR
Sbjct: 491 VRGDAVMVLSIDDPLPEGILTEITKVPGIRDA 522
>gi|56963608|ref|YP_175339.1| D-3-phosphoglycerate dehydrogenase [Bacillus clausii KSM-K16]
gi|56909851|dbj|BAD64378.1| D-3-phosphoglycerate dehydrogenase [Bacillus clausii KSM-K16]
Length = 533
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
PR + I + DV ++ I + D G++ +G +L ++ +NIA +GR + AI
Sbjct: 443 PRIVSINGFSVDVVAEGHILYIQHFDRPGVIGKMGQLLAKHDVNIATMQVGRKSAGGEAI 502
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ +D + +V++ L I +
Sbjct: 503 MIVQVDKHVDQTVIDGLLTFDEIAIANVIDL 533
>gi|225377473|ref|ZP_03754694.1| hypothetical protein ROSEINA2194_03121 [Roseburia inulinivorans DSM
16841]
gi|225210665|gb|EEG93019.1| hypothetical protein ROSEINA2194_03121 [Roseburia inulinivorans DSM
16841]
Length = 264
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ +I + + + + N D G V V ++L +NIA L R+
Sbjct: 169 GGGRIEICEIDGLTANFSGDYPTLIVHNIDQPGHVTEVTSMLAHKSVNIATMQLYRASRG 228
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A+ + D I L+ L I V
Sbjct: 229 GNAVMVIECDQEIPADALKWLERMEGILKVTYLSL 263
>gi|167465145|ref|ZP_02330234.1| phosphoglycerate dehydrogenase [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 527
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 39/97 (40%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + R ++I D ++ + + D GI+ VG +LG NIA +GR
Sbjct: 431 LLAGYGERIVRIDRFPVDFAPDGHILLVSHNDKPGIIGKVGTLLGTKDFNIATMQVGREI 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L ID + VL++ I V+
Sbjct: 491 IGGSAIMVLTIDRPVSQDVLDQFVRLPEIVNVRALTL 527
>gi|313902560|ref|ZP_07835960.1| D-3-phosphoglycerate dehydrogenase [Thermaerobacter subterraneus
DSM 13965]
gi|313467126|gb|EFR62640.1| D-3-phosphoglycerate dehydrogenase [Thermaerobacter subterraneus
DSM 13965]
Length = 579
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G PR + + + D+ ++ + D G++ VG +LG INIA + R Q
Sbjct: 437 EGLPRLVHLDGLPLDMVPAPRLLLTRHHDRPGMIGKVGGLLGMGEINIAAMQVARRQVRG 496
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI L +D + S+L ++ + + V
Sbjct: 497 EAIMVLALDDPLPPSLLAEIRRLPGMEEARLVHVPV 532
>gi|294085874|ref|YP_003552634.1| phosphoglycerate dehydrogenase and related dehydrogenase
[Candidatus Puniceispirillum marinum IMCC1322]
gi|292665449|gb|ADE40550.1| Phosphoglycerate dehydrogenase and related dehydrogenase
[Candidatus Puniceispirillum marinum IMCC1322]
Length = 527
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ K R +++Q I + D ++ + N D G + +G + G+YG+NIA FHLGR
Sbjct: 429 LVGGDKARIVEVQHIAVESDFPAHLLYLRNYDKPGFIGDLGTLCGKYGVNIATFHLGRRD 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ + IDG + +S+L L + V +F
Sbjct: 489 VGGEAVALVEIDGELPDSMLGDLRALKQVVRVDALQF 525
>gi|163781587|ref|ZP_02176587.1| D-3-phosphoglycerate dehydrogenase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882807|gb|EDP76311.1| D-3-phosphoglycerate dehydrogenase [Hydrogenivirga sp. 128-5-R1-1]
Length = 530
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 48/95 (50%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V R ++I + D++ +++ N D+ G++ +G++LG +NIA F LGR +
Sbjct: 434 VLEGQLLRIVQIDKYRVDIEPEGILLVFENKDVPGVIGKIGSVLGSASVNIAGFRLGREK 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ L +D + V+E L I FVKQ
Sbjct: 494 KGGIALGILNLDDQVPEHVIEDLRGIPEILFVKQV 528
>gi|195953161|ref|YP_002121451.1| D-3-phosphoglycerate dehydrogenase [Hydrogenobaculum sp. Y04AAS1]
gi|195932773|gb|ACG57473.1| D-3-phosphoglycerate dehydrogenase [Hydrogenobaculum sp. Y04AAS1]
Length = 527
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 48/89 (53%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
PR ++I DV+ +M+ N D G++ +G+ILG+ +NIA F LGR + A+
Sbjct: 437 PRILQIDRFYVDVEPEGVMLVFENKDAPGVIGTIGSILGQANVNIAGFRLGREKKGGLAL 496
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
L +D + + VLEKL I +KQ
Sbjct: 497 GVLNLDSKVSDEVLEKLKRIPQIISMKQV 525
>gi|325294449|ref|YP_004280963.1| D-3-phosphoglycerate dehydrogenase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064897|gb|ADY72904.1| D-3-phosphoglycerate dehydrogenase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 529
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V D P+ ++I FD+ + I N D+ G++ +G+ILG+Y +NIA F LGR +
Sbjct: 433 VMDDQFPKIVEINGFLFDLTPKGKFLLIKNFDVPGVIGKLGSILGKYNVNIAGFQLGRIE 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A + +D + + ++ I VKQ
Sbjct: 493 RGKEAKGVILVDNDVPQEAINEIKKIPEILEVKQINL 529
>gi|118580120|ref|YP_901370.1| D-3-phosphoglycerate dehydrogenase [Pelobacter propionicus DSM
2379]
gi|118502830|gb|ABK99312.1| D-3-phosphoglycerate dehydrogenase [Pelobacter propionicus DSM
2379]
Length = 539
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 49/94 (52%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G PR +++++ + D M+ + D+ G++ +G I+G + INIA +LGR +
Sbjct: 435 EGAPRIVRLRDFSIDFSPEEHMLLLHYIDLPGMIGRIGTIMGTHDINIASMNLGRREKKG 494
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D ++ V+E++ F+K
Sbjct: 495 EAMVILSLDSAVPLQVVEEIRTATDASFIKPLHL 528
>gi|282163065|ref|YP_003355450.1| D-3-phosphoglycerate dehydrogenase [Methanocella paludicola SANAE]
gi|282155379|dbj|BAI60467.1| D-3-phosphoglycerate dehydrogenase [Methanocella paludicola SANAE]
Length = 526
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 44/97 (45%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + R + I + + MI ++ D G++ VG ILG+ INIA +GR
Sbjct: 430 IFGNKDARIVGIDNYRIEANPAGYMIVTMHKDRPGVIGNVGTILGKNDINIAGMVVGREA 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L +D ++ VL+++ + + +
Sbjct: 490 VRGEAIMILNVDDAVPQPVLKEMIEKAGLYDARYVKL 526
>gi|322381790|ref|ZP_08055744.1| D-3-phosphoglycerate dehydrogenase-like protein [Paenibacillus
larvae subsp. larvae B-3650]
gi|321154178|gb|EFX46500.1| D-3-phosphoglycerate dehydrogenase-like protein [Paenibacillus
larvae subsp. larvae B-3650]
Length = 535
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 39/97 (40%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + R ++I D ++ + + D GI+ VG +LG NIA +GR
Sbjct: 439 LLAGYGERIVRIDRFPVDFAPDGHILLVSHNDKPGIIGKVGTLLGTKDFNIATMQVGREI 498
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L ID + VL++ I V+
Sbjct: 499 IGGSAIMVLTIDRPVSQDVLDQFVRLPEIVNVRALTL 535
>gi|159905466|ref|YP_001549128.1| D-3-phosphoglycerate dehydrogenase [Methanococcus maripaludis C6]
gi|159886959|gb|ABX01896.1| D-3-phosphoglycerate dehydrogenase [Methanococcus maripaludis C6]
Length = 523
Score = 103 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
+ F +I D+ + I + D G+V VG +LGE+GINIA +GR + H
Sbjct: 431 NEIVFREINGYRMDIKPEGTICIIKHIDRPGMVGKVGVLLGEHGINIAGMQVGRREPGGH 490
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+I FL +D I + V+ ++ +R K
Sbjct: 491 SIMFLDVDHMISDDVMAEIMKIENVRAAKSINI 523
>gi|241762175|ref|ZP_04760258.1| D-3-phosphoglycerate dehydrogenase [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241373425|gb|EER63025.1| D-3-phosphoglycerate dehydrogenase [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 527
Score = 103 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F R ++I I + ++ M+ IVN D G + +G +LG+ G+NI FHLGR
Sbjct: 430 LFGSEGTRLVEIFGIKVEANLSGDMLYIVNDDAPGFIGRLGTLLGKAGVNIGTFHLGRRN 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D + + K++ +R VK F
Sbjct: 490 TGGEAVLLLSVDSPVTAGKMAKVAELSGVREVKSLHF 526
>gi|224417936|ref|ZP_03655942.1| D-3-phosphoglycerate dehydrogenase [Helicobacter canadensis MIT
98-5491]
gi|253827274|ref|ZP_04870159.1| D-3-phosphoglycerate dehydrogenase [Helicobacter canadensis MIT
98-5491]
gi|313141477|ref|ZP_07803670.1| d-3-phosphoglycerate dehydrogenase [Helicobacter canadensis MIT
98-5491]
gi|253510680|gb|EES89339.1| D-3-phosphoglycerate dehydrogenase [Helicobacter canadensis MIT
98-5491]
gi|313130508|gb|EFR48125.1| d-3-phosphoglycerate dehydrogenase [Helicobacter canadensis MIT
98-5491]
Length = 527
Score = 103 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ P+ ++I D+ MI N D G++ FVG L ++ INIA F LGR
Sbjct: 433 VFNENTPKIVEINHFELDIAPKGRMILFRNNDTPGVIGFVGTTLAKHNINIADFRLGRY- 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A++ + +D + N V+++L+ +K
Sbjct: 492 -GKEALAVILVDDEVSNEVIKELAGIEACLSIKYV 525
>gi|119491306|ref|ZP_01623360.1| D-3-phosphoglycerate dehydrogenase [Lyngbya sp. PCC 8106]
gi|119453470|gb|EAW34632.1| D-3-phosphoglycerate dehydrogenase [Lyngbya sp. PCC 8106]
Length = 527
Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 41/92 (44%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + R I +V M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 431 LLGSSEMRITNIDGFPINVPPTHHMLFTLHRDMPGIIGKIGSLLGSFNVNIASMQVGRKI 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID + +L ++ IR
Sbjct: 491 VRGEAVMVLSIDDPLPEGLLSEIMKVPGIRDA 522
>gi|77920705|ref|YP_358520.1| D-3-phosphoglycerate dehydrogenase [Pelobacter carbinolicus DSM
2380]
gi|77546788|gb|ABA90350.1| D-3-phosphoglycerate dehydrogenase [Pelobacter carbinolicus DSM
2380]
Length = 535
Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 50/95 (52%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G P+ +K+++ N D M+ I AD G++ +G ILGE GINI +LGR +
Sbjct: 435 EGIPKIVKMRDFNTDFQPEEHMLVISYADKPGLIGKIGTILGEAGINIGSMNLGRRAKSG 494
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A+ L +D VLE+L+ ++ F++
Sbjct: 495 EAMVVLSLDTPAPAEVLEQLATSIDAAFIRSIHME 529
>gi|260753763|ref|YP_003226656.1| D-3-phosphoglycerate dehydrogenase [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|258553126|gb|ACV76072.1| D-3-phosphoglycerate dehydrogenase [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 527
Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F R ++I I + ++ M+ IVN D G + +G +LG+ G+NI FHLGR
Sbjct: 430 LFGSEGTRLVEIFGIKVEANLSGDMLYIVNDDAPGFIGRLGTLLGKAGVNIGTFHLGRRN 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D + + K++ +R VK F
Sbjct: 490 TGGEAVLLLSVDSPVTAGKMAKVAELSGVREVKSLHF 526
>gi|291279254|ref|YP_003496089.1| D-3-phosphoglycerate dehydrogenase [Deferribacter desulfuricans
SSM1]
gi|290753956|dbj|BAI80333.1| D-3-phosphoglycerate dehydrogenase [Deferribacter desulfuricans
SSM1]
Length = 540
Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D+ + N D G++ VG ILGE INIA F L R
Sbjct: 445 VFNNKEGRIVLFDDFRIDIIPEGTFLYFRNIDRPGVIGKVGTILGENNINIAGFELARQ- 503
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+F+ +D I SVL ++ + V E
Sbjct: 504 KGGEAIAFVSVDNEIPESVLSEIKKIDGMLEVNLVEL 540
>gi|312137068|ref|YP_004004405.1| d-3-phosphoglycerate dehydrogenase [Methanothermus fervidus DSM
2088]
gi|311224787|gb|ADP77643.1| D-3-phosphoglycerate dehydrogenase [Methanothermus fervidus DSM
2088]
Length = 526
Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 41/88 (46%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
KP+ I I DV+ M+ + D+ G + +G LGE+ INIA +GR +
Sbjct: 432 NKPKIININGYKVDVEPKGNMMIVKYRDLPGTIGAIGTKLGEHDINIAIMQVGREKPGGE 491
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D + VLE++ +
Sbjct: 492 AVMVLKVDQKVPEDVLEEVKSLKNVEDA 519
>gi|218133785|ref|ZP_03462589.1| hypothetical protein BACPEC_01673 [Bacteroides pectinophilus ATCC
43243]
gi|217991160|gb|EEC57166.1| hypothetical protein BACPEC_01673 [Bacteroides pectinophilus ATCC
43243]
Length = 223
Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 34/96 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ +I I+ + + + N D G V V ++L G+NIA L RS
Sbjct: 128 GGARINIAQIDGIDTNFSGDYPTLVVHNLDQPGHVAEVTSMLSHKGVNIATMQLYRSNRG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A+ L D I + L ++ V
Sbjct: 188 GEAVMVLECDQEIPEDGIRWLEKVEGVKKVTYLSIE 223
>gi|16127445|ref|NP_422009.1| D-3-phosphoglycerate dehydrogenase [Caulobacter crescentus CB15]
gi|221236257|ref|YP_002518694.1| D-3-phosphoglycerate dehydrogenase [Caulobacter crescentus NA1000]
gi|13424897|gb|AAK25177.1| D-3-phosphoglycerate dehydrogenase [Caulobacter crescentus CB15]
gi|220965430|gb|ACL96786.1| D-3-phosphoglycerate dehydrogenase [Caulobacter crescentus NA1000]
Length = 526
Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G PR ++++ + D M+ + N D G + +G +LGE G+NIA F+LGR + E
Sbjct: 434 GAPRIVEVKGMELDAAFSPAMLYVNNLDKPGFIGALGMLLGEAGVNIATFNLGRVSADED 493
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +D + +L K+ ++ + F
Sbjct: 494 AIALVGVDQAPDAGLLAKIQALPHVKEARALTF 526
>gi|117924723|ref|YP_865340.1| D-3-phosphoglycerate dehydrogenase [Magnetococcus sp. MC-1]
gi|117608479|gb|ABK43934.1| D-3-phosphoglycerate dehydrogenase [Magnetococcus sp. MC-1]
Length = 527
Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 56/97 (57%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+ +PR I + EI + L++ + N D G++ VG +LGE G+NI+ FHLGR Q
Sbjct: 431 LFNGTEPRLISMDEIPIEAQPEGLLLFVANDDTPGLIGRVGTLLGEAGVNISSFHLGREQ 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ AI+F+ +D + ++++L +R VK +
Sbjct: 491 AGGRAIAFINVDSEVPAPLMQQLHETANVREVKLIRY 527
>gi|148263798|ref|YP_001230504.1| D-3-phosphoglycerate dehydrogenase [Geobacter uraniireducens Rf4]
gi|146397298|gb|ABQ25931.1| D-3-phosphoglycerate dehydrogenase [Geobacter uraniireducens Rf4]
Length = 541
Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 49/94 (52%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G PR +++++ + D M+ + D G++ +G I+G + INIA +LGR +
Sbjct: 436 EGAPRIVRLRDYSMDFAPAEHMLLLNYEDRPGMIGKIGTIMGAHSINIASMNLGRREEKG 495
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D ++ V+E++ + F++
Sbjct: 496 EAMVILSLDSAVPLEVMEEVRIATEATFIRAIHM 529
>gi|308067179|ref|YP_003868784.1| Probable L-serine dehydratase, beta chain (L-serine deaminase)
[Paenibacillus polymyxa E681]
gi|305856458|gb|ADM68246.1| Probable L-serine dehydratase, beta chain (L-serine deaminase)
[Paenibacillus polymyxa E681]
Length = 229
Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 39/95 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ E ++ + ++++D G + + + LG INIA+ H+ R
Sbjct: 126 GGGSIHVQQLNEFRVNLTGELPTLVLLHSDKPGTLGAITSALGAAHINIAYMHVDRKGRD 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ + D S ++ +L + +K
Sbjct: 186 GEALTAIETDSSAPAELIAELRSLPHMYEIKMINL 220
>gi|158334453|ref|YP_001515625.1| D-3-phosphoglycerate dehydrogenase [Acaryochloris marina MBIC11017]
gi|158304694|gb|ABW26311.1| D-3-phosphoglycerate dehydrogenase [Acaryochloris marina MBIC11017]
Length = 527
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 44/97 (45%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + + R I + +V R M+ V+ D+ GI+ +G+ LG + +NIA +GR
Sbjct: 430 ILGEDELRITNIDDFPINVVPTRHMLLTVHRDMPGIIGQIGSQLGSFNVNIASMQVGRKM 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + VL +++ IR
Sbjct: 490 VRGSAVMVLSLDDPLPEGVLSEITNVEGIRDAYIVNL 526
>gi|134046847|ref|YP_001098332.1| D-3-phosphoglycerate dehydrogenase [Methanococcus maripaludis C5]
gi|132664472|gb|ABO36118.1| D-3-phosphoglycerate dehydrogenase [Methanococcus maripaludis C5]
Length = 523
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
+ F +I D+ + I + D G+V VG +LGE+GINIA +GR + H
Sbjct: 431 NEIVFREINGYRMDIKPEGTICIIKHIDRPGMVGKVGVLLGEHGINIAGMQVGRREPGGH 490
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+I FL +D I + V+ +++ +R K
Sbjct: 491 SIMFLDVDHMISDEVMAEITKMENVRAAKSINI 523
>gi|312128646|ref|YP_003993520.1| d-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor
hydrothermalis 108]
gi|311778665|gb|ADQ08151.1| D-3-phosphoglycerate dehydrogenase [Caldicellulosiruptor
hydrothermalis 108]
Length = 531
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 43/89 (48%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + R I D + M+ I N D G++ +G I+GEY INIA + R++ E
Sbjct: 438 NNEGRIIDFFGYKVDFKPEKYMLLIQNIDKPGMIGKIGTIVGEYDINIAQMQVSRNKKGE 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ +DG + N +EKL I V
Sbjct: 498 KAVMVCEVDGIVPNEAIEKLKNTDGILRV 526
>gi|297568578|ref|YP_003689922.1| D-3-phosphoglycerate dehydrogenase [Desulfurivibrio alkaliphilus
AHT2]
gi|296924493|gb|ADH85303.1| D-3-phosphoglycerate dehydrogenase [Desulfurivibrio alkaliphilus
AHT2]
Length = 528
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 43/97 (44%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF +PR ++ + M+ + N D+ G++ + + +G+ G+NIA +GR Q
Sbjct: 431 VFGKKEPRLVRFNTFRLEALPEGPMLFVHNNDVPGVIGKLASTIGDAGVNIARMTVGREQ 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ I L D + +L+K+ I +
Sbjct: 491 DSGRNIILLNTDSLLDRELLKKVKALDNIHDAMVLDL 527
>gi|153005366|ref|YP_001379691.1| D-3-phosphoglycerate dehydrogenase [Anaeromyxobacter sp. Fw109-5]
gi|152028939|gb|ABS26707.1| D-3-phosphoglycerate dehydrogenase [Anaeromyxobacter sp. Fw109-5]
Length = 528
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 40/95 (42%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V+ + R +++ + ++ N D G+V +G L G+NIA L R +
Sbjct: 432 VYGKREARVVRVNAFRVEAVPDGNVLLCENDDAPGVVGNLGTTLAAAGVNIAQISLSRLE 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A +FL +D +LEK+ +R +
Sbjct: 492 DRSGAFAFLNVDSPPSAELLEKVRKLPHVRSARAI 526
>gi|225028928|ref|ZP_03718120.1| hypothetical protein EUBHAL_03217 [Eubacterium hallii DSM 3353]
gi|224953767|gb|EEG34976.1| hypothetical protein EUBHAL_03217 [Eubacterium hallii DSM 3353]
Length = 222
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 33/93 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ +I I + + + N D G V V ++L G+NIA L RS
Sbjct: 124 GGGRINIAEIDGIETNFSGENPTLIVHNLDQPGHVSEVTSMLAHKGVNIATMQLYRSSKG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ + D + + L + V
Sbjct: 184 GKAVMVVECDQEVPQEGIRWLERVEGVLKVTYL 216
>gi|220928617|ref|YP_002505526.1| D-3-phosphoglycerate dehydrogenase [Clostridium cellulolyticum H10]
gi|219998945|gb|ACL75546.1| D-3-phosphoglycerate dehydrogenase [Clostridium cellulolyticum H10]
Length = 535
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ + R + D + ++ I N D+ GI+ +G ILG INIA R+
Sbjct: 439 VFAIQEIRVVDFFGYKLDFEPTPYVLAIQNVDVPGIIGQIGTILGASDINIAAMQWSRNH 498
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
E A++F+ +D + +VLE L + V +F
Sbjct: 499 KGEKAVAFVSVDCEVPANVLELLKKINGVLKVTLLKF 535
>gi|56552581|ref|YP_163420.1| D-3-phosphoglycerate dehydrogenase [Zymomonas mobilis subsp.
mobilis ZM4]
gi|56544155|gb|AAV90309.1| D-3-phosphoglycerate dehydrogenase [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 527
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F R ++I I + ++ M+ IVN D G + +G +LG+ G+NI FHLGR
Sbjct: 430 LFGSEGTRLVEIFGIKIEANLSGDMLYIVNDDAPGFIGRLGTLLGKAGVNIGTFHLGRRN 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D + + K++ +R VK F
Sbjct: 490 TGGEAVLLLSVDSPVTAGKMAKVAELSGVREVKSLHF 526
>gi|222445984|ref|ZP_03608499.1| hypothetical protein METSMIALI_01632 [Methanobrevibacter smithii
DSM 2375]
gi|261349477|ref|ZP_05974894.1| phosphoglycerate dehydrogenase [Methanobrevibacter smithii DSM
2374]
gi|222435549|gb|EEE42714.1| hypothetical protein METSMIALI_01632 [Methanobrevibacter smithii
DSM 2375]
gi|288861840|gb|EFC94138.1| phosphoglycerate dehydrogenase [Methanobrevibacter smithii DSM
2374]
Length = 524
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 40/92 (43%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
P+ +K+ + DV M D+ G + +G LGEYGINI +GR + A
Sbjct: 433 DPKILKVNDYWVDVKPEGHMFIAKYEDVPGSIGKIGTALGEYGINIGIMQVGRDEKGGRA 492
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
I L +D I V++K+ + E
Sbjct: 493 IMILTLDKEIPKEVIKKIQDLDNVYDAIGLEL 524
>gi|124026487|ref|YP_001015602.1| D-3-phosphoglycerate dehydrogenase [Prochlorococcus marinus str.
NATL1A]
gi|123961555|gb|ABM76338.1| putative D-3-phosphoglycerate dehydrogenase (PGDH) [Prochlorococcus
marinus str. NATL1A]
Length = 528
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 42/97 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF DG I E + R M+ + D+ GI+ +G++LG+Y +NIA +GR
Sbjct: 432 VFGDGDLGITSIDEYPINFVPSRHMLFTRHRDMPGIIGQIGSLLGKYNVNIASMQVGRRI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I + +L + I
Sbjct: 492 VRGEAVMVLSIDDPIPSELLGSILSMQGINEAHSVTL 528
>gi|159031923|dbj|BAF91727.1| 3-phosphoglycerate dehydrogenase [Aphanothece halophytica]
Length = 526
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 45/97 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ SD + R + +V M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 430 LLSDQEMRITNVDGFPINVPPNNYMLFTLHRDMPGIIGKIGSLLGGFNVNIASMQVGRKI 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID + VL+++ IR +
Sbjct: 490 VRGDAVMVLSIDDPLPEGVLDEIMKVPGIRDAYTIKL 526
>gi|290967984|ref|ZP_06559533.1| phosphoglycerate dehydrogenase [Megasphaera genomosp. type_1 str.
28L]
gi|290781890|gb|EFD94469.1| phosphoglycerate dehydrogenase [Megasphaera genomosp. type_1 str.
28L]
Length = 530
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 40/96 (41%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+ +P+ ++I D ++ + D ++ + +LG+ GINI +GR
Sbjct: 431 LFNKKEPKIVQIDSCRVDFTPEGYLLLAPHRDEPNMIGQISTVLGQAGINITSMQVGRMN 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
I + + I N ++ KL I +K
Sbjct: 491 EDGTNIMAIAVAEDIPNDIMLKLRAIDGILDMKLIH 526
>gi|72382765|ref|YP_292120.1| D-3-phosphoglycerate dehydrogenase [Prochlorococcus marinus str.
NATL2A]
gi|72002615|gb|AAZ58417.1| D-3-phosphoglycerate dehydrogenase [Prochlorococcus marinus str.
NATL2A]
Length = 528
Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 42/97 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF DG I E + R M+ + D+ GI+ +G++LG+Y +NIA +GR
Sbjct: 432 VFGDGDLGITSIDEYPINFVPSRHMLFTRHRDMPGIIGQIGSLLGKYNVNIASMQVGRRI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID I + +L + I
Sbjct: 492 VRGEAVMVLSIDDPIPSELLGSILSMQGINEAHSVTL 528
>gi|295688138|ref|YP_003591831.1| D-3-phosphoglycerate dehydrogenase [Caulobacter segnis ATCC 21756]
gi|295430041|gb|ADG09213.1| D-3-phosphoglycerate dehydrogenase [Caulobacter segnis ATCC 21756]
Length = 526
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 49/93 (52%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G PR ++++ + D M+ I N D G + +G +LGE G+NIA F+LGR + E
Sbjct: 434 GAPRIVEVKGMELDAAFSPAMLYINNLDKPGFIGALGMMLGEAGVNIATFNLGRLAADED 493
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +D + +L K+ ++ + F
Sbjct: 494 AIALVGVDQAPSADLLAKIEALPHVKESRALTF 526
>gi|168700983|ref|ZP_02733260.1| phosphoglycerate dehydrogenase [Gemmata obscuriglobus UQM 2246]
Length = 539
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 46/97 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F D R +++ + + +++ + D+ G++ FVG I G++ +NIA +GR+
Sbjct: 432 LFGDQYVRLVQLGPFRMEGYLDGVLLVFRHHDVPGLIGFVGTIFGKHKVNIAQMTVGRTS 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L +D + + ++ + I V +
Sbjct: 492 PGGEAIGILNLDNWPSDEAVAEVKAHPQISSVTVVKL 528
>gi|124514290|gb|EAY55804.1| D-3-phosphoglycerate dehydrogenase [Leptospirillum rubarum]
Length = 535
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 47/97 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF R + + ++ +V +MI ++N D G+V VG +LG + +NI+ GR
Sbjct: 434 VFQRKDYRIVSLDDLPVEVVPEPIMIYLINQDQPGVVGSVGTVLGTHKVNISRMQFGRDF 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+S + +D +I +LE+L + +K
Sbjct: 494 PGGKAVSMIGVDQNIDAKLLEELRALPNVLSLKVLHL 530
>gi|91202994|emb|CAJ72633.1| similar to D-3-phosphoglycerate dehydrogenase (PGDH) [Candidatus
Kuenenia stuttgartiensis]
Length = 535
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 40/97 (41%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF +PR + I + + ++ + D G + VG++LG INIAH GR +
Sbjct: 439 VFGKNEPRLVDINGYGVEAILNEQILVLFGRDKPGFIGQVGSLLGNKNINIAHMTFGRKE 498
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ IS L ID L ++ I +
Sbjct: 499 VGGNTISILNIDAVPPQDCLNEIKQLNHIDAAFLVQL 535
>gi|220908749|ref|YP_002484060.1| D-3-phosphoglycerate dehydrogenase [Cyanothece sp. PCC 7425]
gi|219865360|gb|ACL45699.1| D-3-phosphoglycerate dehydrogenase [Cyanothece sp. PCC 7425]
Length = 652
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 45/97 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + R I + +V R M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 556 LLGADELRITDIDDFPINVPPTRHMLLTLHRDMPGIIGKIGSLLGSFNVNIASMQVGRKM 615
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A+ L +D + +L +++ IR
Sbjct: 616 VRGNAVMVLSLDDPLPEGLLTEITKVSGIRDAYIVNL 652
>gi|311068824|ref|YP_003973747.1| D-3-phosphoglycerate dehydrogenase [Bacillus atrophaeus 1942]
gi|310869341|gb|ADP32816.1| D-3-phosphoglycerate dehydrogenase [Bacillus atrophaeus 1942]
Length = 525
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + R +++ N D ++ I + D G++ VG ILG+ INIA +GR +
Sbjct: 432 FGE---RIVELNGFNIDFYPTGHLVYIQHQDTTGVIGRVGRILGDNDINIATMQVGRKEK 488
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L D + V+ +LS I VK +
Sbjct: 489 GGEAIMMLSFDRHLEEKVVNELSDVADIVSVKLIDL 524
>gi|121533529|ref|ZP_01665357.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermosinus carboxydivorans Nor1]
gi|121308088|gb|EAX49002.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermosinus carboxydivorans Nor1]
Length = 219
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 34/90 (37%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I ++ + V+ D G++ V ++L + G+NIA + R +
Sbjct: 124 GGGNIVITEIDGYAVELTGEYYTLITVHRDKPGVIALVTHVLAQEGVNIAFMRVSRQERG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L D I L + ++
Sbjct: 184 AQALMILEADQPIPEHALAAVRHVPAVQTA 213
>gi|67920676|ref|ZP_00514196.1| D-3-phosphoglycerate dehydrogenase [Crocosphaera watsonii WH 8501]
gi|67858160|gb|EAM53399.1| D-3-phosphoglycerate dehydrogenase [Crocosphaera watsonii WH 8501]
Length = 525
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 45/92 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ SDG+ R + +V M+ V+ D+ GI+ +G++LG + +NIA +GR
Sbjct: 429 LLSDGEIRITDVDGFPINVPPSNYMLFTVHRDMPGIIGKIGSLLGSFNVNIASMQVGRKI 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D + +L +++ IR
Sbjct: 489 VRGDAVMALSLDDPLPEGLLNEITKVDGIRDA 520
>gi|156740285|ref|YP_001430414.1| D-3-phosphoglycerate dehydrogenase [Roseiflexus castenholzii DSM
13941]
gi|156231613|gb|ABU56396.1| D-3-phosphoglycerate dehydrogenase [Roseiflexus castenholzii DSM
13941]
Length = 524
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 38/93 (40%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G+P ++ M+ + D G++ VG +LGE +NIA +GR E
Sbjct: 432 GEPHVVEADGFWVTFVPAGPMLFTYHRDRPGMIGKVGTLLGEADVNIASMDVGRLAPREQ 491
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + V+ +L I+
Sbjct: 492 AMMVLRLDDPVPPHVIARLREEPDIQHATTLII 524
>gi|237752566|ref|ZP_04583046.1| d-3-phosphoglycerate dehydrogenase [Helicobacter winghamensis ATCC
BAA-430]
gi|229376055|gb|EEO26146.1| d-3-phosphoglycerate dehydrogenase [Helicobacter winghamensis ATCC
BAA-430]
Length = 527
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ P+ + I D++ MI N D G++ FVG L ++ INIA F LGR
Sbjct: 433 VFNENTPKIVNINNFALDIEPKGKMILFRNDDTPGVIGFVGTTLAKHNINIADFRLGRY- 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
+ A++ + +D +I SVL++L+ +K
Sbjct: 492 -GKEALALIIVDDAISQSVLDELASLEACISIKY 524
>gi|167648422|ref|YP_001686085.1| D-3-phosphoglycerate dehydrogenase [Caulobacter sp. K31]
gi|167350852|gb|ABZ73587.1| D-3-phosphoglycerate dehydrogenase [Caulobacter sp. K31]
Length = 526
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G PR ++++ + D M+ I N D G + +G +LGE G+NIA F+LGR + E
Sbjct: 434 GAPRMVEVKGMELDAGFAPAMLYINNLDKPGFIGALGMLLGEAGVNIATFNLGRLSADED 493
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + +D + ++L K+ ++ + F
Sbjct: 494 AIALVGVDQAPDEALLAKIQALPHVKEARALTF 526
>gi|298706859|emb|CBJ25823.1| Phosphoglycerate dehydrogenase / Phosphoserine aminotransferase
[Ectocarpus siliculosus]
Length = 965
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 45/95 (47%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
R + + + D + M+ N D G++ V ILG+ GINIA F LGR ++
Sbjct: 476 GTDTRVVDVDGLEIDFNPSGHMLMFNNPDSPGMLRAVAAILGDQGINIASFALGRVRTGG 535
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A+S L +D +LE++ IR V Q +
Sbjct: 536 VAMSCLNLDTPCTEGMLEEIRKIPDIRNVVQASID 570
>gi|294501109|ref|YP_003564809.1| D-3-phosphoglycerate dehydrogenase [Bacillus megaterium QM B1551]
gi|294351046|gb|ADE71375.1| D-3-phosphoglycerate dehydrogenase [Bacillus megaterium QM B1551]
Length = 524
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 45/95 (47%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ PR I I + D ++ I ++D G++ VG +LG+ INIA +GR Q
Sbjct: 430 AGYGPRIINIDSFDIDFYPEGHLLYIRHSDQPGVIGNVGKVLGDLRINIATMQVGRKQKG 489
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L D + +SV+ L I +++ E
Sbjct: 490 GEAIMMLTFDKLLDDSVISSLKQTSEIVTIQRIEL 524
>gi|206602883|gb|EDZ39364.1| D-3-phosphoglycerate dehydrogenase [Leptospirillum sp. Group II
'5-way CG']
Length = 535
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 48/97 (49%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF R + + ++ +V +MI ++N D G+V VG +LG + +NI+ GR
Sbjct: 434 VFQRKDYRIVSLDDLPVEVVPEPIMIYLINQDQPGVVGSVGTVLGTHKVNISRMQFGRDF 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+S + +D +I + +LE+L + +K
Sbjct: 494 PGGKAVSMIGVDQNIDSKLLEELRALPNVLSLKVLHL 530
>gi|126179793|ref|YP_001047758.1| D-3-phosphoglycerate dehydrogenase [Methanoculleus marisnigri JR1]
gi|125862587|gb|ABN57776.1| D-3-phosphoglycerate dehydrogenase [Methanoculleus marisnigri JR1]
Length = 527
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 41/97 (42%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V + R + I D+ ++ + D G++ ILG +NIA +GR++
Sbjct: 431 VSGPNRARIVSIGGYMTDLTPTGHVVISRHTDKPGVIGKAATILGSVNVNIAGMQVGRNK 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
E A+ L +D ++ ++++ I K E
Sbjct: 491 PGEEALMVLTVDSAVPADAMDEIKKIDGIHTAKHAEI 527
>gi|292657076|ref|YP_003536973.1| D-3-phosphoglycerate dehydrogenase [Haloferax volcanii DS2]
gi|291370333|gb|ADE02560.1| D-3-phosphoglycerate dehydrogenase [Haloferax volcanii DS2]
Length = 525
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+ PR ++I D M+ N D G++ F+G +LGE +NIA R
Sbjct: 428 LFTGEDPRIVRINGYRLDAIPYGQMLVARNYDKPGVIGFIGTVLGENDVNIAGMFNARRA 487
Query: 61 S-TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ +D + SV EKL + I V
Sbjct: 488 KAGGEALTVYNLDDDVPESVREKLLADARIIDVDLITL 525
>gi|319956089|ref|YP_004167352.1| d-3-phosphoglycerate dehydrogenase [Nitratifractor salsuginis DSM
16511]
gi|319418493|gb|ADV45603.1| D-3-phosphoglycerate dehydrogenase [Nitratifractor salsuginis DSM
16511]
Length = 530
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF +G R + I D++ MI N D G++ VG I+ E G+NI F LGR
Sbjct: 435 VFEEGIQRIVDIDGYTLDLEPKGRMILFKNNDEPGVIGDVGRIIAENGLNIGDFRLGRDS 494
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +DG I ++++L+ VK
Sbjct: 495 N-GQALAVVRVDGEIPKKLIDELAALPACISVKAVSL 530
>gi|291534471|emb|CBL07583.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Roseburia intestinalis M50/1]
gi|291541312|emb|CBL14423.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Roseburia intestinalis XB6B4]
Length = 221
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 33/92 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ + ++ I + + + N D G V V ++L G+NIA L R
Sbjct: 124 GGGRIQICELDGITANFSGDYPTLIVHNIDQPGHVTEVTSMLAHKGVNIATMQLYRKSRG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
A+ + D + L L I V
Sbjct: 184 GSAVMVIECDQEVPKESLAWLERLEGILKVTY 215
>gi|303239457|ref|ZP_07325984.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Acetivibrio cellulolyticus CD2]
gi|302593020|gb|EFL62741.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Acetivibrio cellulolyticus CD2]
Length = 224
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 38/98 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + +I ++ ++ + + N D G V V ++LG +NIA L R +
Sbjct: 124 GGGTIKICQIDGLHANICATYPTLIVHNMDQPGHVSEVTSMLGHKSVNIAAMQLYRDKRG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
+A+ + D + L+ L + V D
Sbjct: 184 GNAVMVIECDQEVPLESLDWLRKLEGVVKVTYLSLEED 221
>gi|88604291|ref|YP_504469.1| D-3-phosphoglycerate dehydrogenase [Methanospirillum hungatei JF-1]
gi|88189753|gb|ABD42750.1| D-3-phosphoglycerate dehydrogenase [Methanospirillum hungatei JF-1]
Length = 528
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 41/97 (42%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V G R + I D+ +I + D G++ ILGE+ INIA +GR Q
Sbjct: 432 VLYKGGARIVSIAGYTMDMVPEGAVIISRHLDRPGVIGRASTILGEHQINIAGMQVGRFQ 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
E AI L +DG + V+E + I K
Sbjct: 492 PGEEAIMVLNVDGDVPEEVMEAIRGMPGIYSAKFARI 528
>gi|251771412|gb|EES51991.1| D-3-phosphoglycerate dehydrogenase [Leptospirillum
ferrodiazotrophum]
Length = 537
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 47/97 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F R + + + +V +M+ + N D G+V VG++LG +GINI+ GR
Sbjct: 436 IFQKKDFRIVSLDSLPVEVVPDPIMLYLTNQDQPGVVGLVGSLLGSHGINISRMQFGRDF 495
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+S + +D +VLE++ N I +K
Sbjct: 496 PGGKAVSMIGVDSEPPAAVLEEIRKNPKIIALKLLRL 532
>gi|289523971|ref|ZP_06440825.1| phosphoglycerate dehydrogenase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502627|gb|EFD23791.1| phosphoglycerate dehydrogenase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 544
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 49/97 (50%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V +GK R + + + D ++ N D G++ +G +LG+YG+NIA+F LGR
Sbjct: 445 VTEEGKKRIVGVDDYEIDFVPEGWVLLFSNHDRPGVIGKIGTLLGDYGVNIANFALGRKN 504
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ AI+ L +D SI +EK+ + + +
Sbjct: 505 GSGLAIAALQLDSSIPKEAMEKIQKDADLIWAHLINL 541
>gi|153952246|ref|YP_001398036.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939692|gb|ABS44433.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
doylei 269.97]
Length = 527
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D MI N DI G++ + ++L INIA F LGR
Sbjct: 432 VFNENEQRIVGLNGFKIDFKPKGKMIIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDS 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + ID + VL++L FV+ E
Sbjct: 492 F-GYALAVVLIDEKVQKEVLDELKQLEACVFVQYVEI 527
>gi|57167923|ref|ZP_00367063.1| D-3-phosphoglycerate dehydrogenase [Campylobacter coli RM2228]
gi|57021045|gb|EAL57709.1| D-3-phosphoglycerate dehydrogenase [Campylobacter coli RM2228]
Length = 527
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D MI N DI G++ + ++L INIA F LGR
Sbjct: 432 VFNENEQRIVGLNGFQTDFKPKGKMIIFKNKDIPGVIAKISSVLASKNINIADFRLGRDG 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + ID + VLE+L FV+ E
Sbjct: 492 F-GYALAVVLIDEKVQKEVLEELRQLEACIFVQYVEI 527
>gi|269838299|ref|YP_003320527.1| D-3-phosphoglycerate dehydrogenase [Sphaerobacter thermophilus DSM
20745]
gi|269787562|gb|ACZ39705.1| D-3-phosphoglycerate dehydrogenase [Sphaerobacter thermophilus DSM
20745]
Length = 737
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 38/89 (42%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
++I + + + ++ + D G+V VG ILG Y +NIA +GR + AI
Sbjct: 629 IMEIDRFSLERPLAGDLLITRHWDRPGVVGRVGTILGRYNVNIAGMQVGRHERGGQAIMV 688
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D I + L ++ I
Sbjct: 689 LNVDDIIPEAALAEIVTIPGIESAYVVSL 717
>gi|294678963|ref|YP_003579578.1| phosphoglycerate dehydrogenase [Rhodobacter capsulatus SB 1003]
gi|294477783|gb|ADE87171.1| phosphoglycerate dehydrogenase [Rhodobacter capsulatus SB 1003]
Length = 531
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 62/98 (63%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
FSDGKPRFI+I+ IN D ++GR M+ N D+ GI+ +G +LGE +N+A+F LGR+ +
Sbjct: 433 FSDGKPRFIQIKGINVDAEVGRHMLYTTNKDVPGIIGKLGTLLGENKVNLANFTLGRAAA 492
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI+ +D ++ V+ +L + VK EFN+
Sbjct: 493 GGEAIAIAYLDEALDAKVVSELEATGLFQQVKPLEFNI 530
>gi|330839849|ref|YP_004414429.1| D-3-phosphoglycerate dehydrogenase [Selenomonas sputigena ATCC
35185]
gi|329747613|gb|AEC00970.1| D-3-phosphoglycerate dehydrogenase [Selenomonas sputigena ATCC
35185]
Length = 527
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 44/95 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R + I DVD ++ + + G++ VG ++GE G+NI+ +GR+
Sbjct: 431 GTEGRIVSINGYRVDVDPHDRILICPHINRPGVIGTVGTMMGERGVNISSMQVGRTDKEG 490
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
+ L +D I +L++++ I + F+
Sbjct: 491 TNVMVLTVDHDIPEDLLQQITAVDGIFGARLVNFH 525
>gi|297619680|ref|YP_003707785.1| D-3-phosphoglycerate dehydrogenase [Methanococcus voltae A3]
gi|297378657|gb|ADI36812.1| D-3-phosphoglycerate dehydrogenase [Methanococcus voltae A3]
Length = 525
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 47/94 (50%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG+ F KI + DV + I + D G+V VG +LGEYGINIA +GR +
Sbjct: 432 DGEVVFRKINGYDIDVKPEGDLCVIRHIDRPGMVGKVGVLLGEYGINIAKMQVGRKEPGG 491
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
H+I L +D +I V+ KL +R K
Sbjct: 492 HSIMILDVDHTISEDVMSKLKEMDNVRTAKMVTL 525
>gi|126657695|ref|ZP_01728849.1| phosphoglycerate dehydrogenase [Cyanothece sp. CCY0110]
gi|126620912|gb|EAZ91627.1| phosphoglycerate dehydrogenase [Cyanothece sp. CCY0110]
Length = 525
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 45/92 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ SDG+ R + +V M+ V+ D+ GI+ +G++LG + +NIA +GR
Sbjct: 429 LLSDGEIRITDVDGFPINVPPSNYMLFTVHRDMPGIIGKIGSLLGSFNVNIASMQVGRKI 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D + +L +++ IR
Sbjct: 489 VRGDAVMALSLDDPLPEGLLTEITKVSGIRDA 520
>gi|260888757|ref|ZP_05900020.1| phosphoglycerate dehydrogenase [Selenomonas sputigena ATCC 35185]
gi|260861510|gb|EEX76010.1| phosphoglycerate dehydrogenase [Selenomonas sputigena ATCC 35185]
Length = 529
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 44/95 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R + I DVD ++ + + G++ VG ++GE G+NI+ +GR+
Sbjct: 433 GTEGRIVSINGYRVDVDPHDRILICPHINRPGVIGTVGTMMGERGVNISSMQVGRTDKEG 492
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
+ L +D I +L++++ I + F+
Sbjct: 493 TNVMVLTVDHDIPEDLLQQITAVDGIFGARLVNFH 527
>gi|196247676|ref|ZP_03146378.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Geobacillus sp. G11MC16]
gi|196212460|gb|EDY07217.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Geobacillus sp. G11MC16]
Length = 220
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 42/93 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ + + + I++ D G + V + L ++ INI H + R +
Sbjct: 126 GGGKIEIIELNGFDLKLSGHHPALLIMHNDRYGTIGAVASTLAKHAINIGHMEVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ + +D + + ++++L I V +
Sbjct: 186 KEALMTIEVDQPLSDDLIQELEQLPNIIQVTKL 218
>gi|305432051|ref|ZP_07401218.1| phosphoglycerate dehydrogenase [Campylobacter coli JV20]
gi|304445135|gb|EFM37781.1| phosphoglycerate dehydrogenase [Campylobacter coli JV20]
Length = 527
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D MI N DI G++ + ++L INIA F LGR
Sbjct: 432 VFNENEQRIVGLNGFQTDFKPKGKMIIFKNKDIPGVIAKISSVLASKNINIADFRLGRDG 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + ID + VLE+L FV+ E
Sbjct: 492 F-GYALAVVLIDEKVQKEVLEELRQLEACIFVQYVEI 527
>gi|240145234|ref|ZP_04743835.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Roseburia intestinalis L1-82]
gi|257202698|gb|EEV00983.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Roseburia intestinalis L1-82]
Length = 221
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 32/92 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ + ++ I + + + N D G V V ++ G+NIA L R
Sbjct: 124 GGGRIQICELDGITANFSGDYPTLIVHNIDQPGHVTEVTSMFAHKGVNIATMQLYRKSRG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
A+ + D + L L I V
Sbjct: 184 GSAVMVIECDQEVPKESLAWLERLEGILKVTY 215
>gi|296109202|ref|YP_003616151.1| D-3-phosphoglycerate dehydrogenase [Methanocaldococcus infernus ME]
gi|295434016|gb|ADG13187.1| D-3-phosphoglycerate dehydrogenase [Methanocaldococcus infernus ME]
Length = 523
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S+ KP ++I+ + +++ I + D G++ VG ILGEYGINIA +GR +
Sbjct: 429 SNNKPIILEIEGYEVNFIPESVVLIIRHIDKPGMIGKVGTILGEYGINIAEMQVGRKEPG 488
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
++ + +D ++ VL+K+ I+ +
Sbjct: 489 GDSVMLIKLDHNVPEEVLKKIKEIENIKDAVVVKL 523
>gi|138894704|ref|YP_001125157.1| L-serine dehydratase subunit beta [Geobacillus thermodenitrificans
NG80-2]
gi|134266217|gb|ABO66412.1| L-serine dehydratase (beta chain) [Geobacillus thermodenitrificans
NG80-2]
Length = 220
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 42/93 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ + + + I++ D G + V + L ++ INI H + R +
Sbjct: 126 GGGKIEIIELNGFDLKLSGHHPALLIMHNDRYGTIGAVASTLAKHAINIGHMEVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ + +D + + ++++L I V +
Sbjct: 186 KEALMTIEVDQPLSDDLIQELEQLPNIIQVTKL 218
>gi|15669207|ref|NP_248012.1| D-3-phosphoglycerate dehydrogenase [Methanocaldococcus jannaschii
DSM 2661]
gi|3122874|sp|Q58424|SERA_METJA RecName: Full=D-3-phosphoglycerate dehydrogenase; Short=PGDH
gi|1591676|gb|AAB99020.1| phosphoglycerate dehydrogenase (serA) [Methanocaldococcus
jannaschii DSM 2661]
Length = 524
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ KP +++ ++ I + D G + V LG+YGINIA +GR +
Sbjct: 431 NNKPVILEVDGYEVSFIPEGVLAIIKHIDRPGTIGRVCITLGDYGINIASMQVGRKEPGG 490
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
++ L +D ++ V+EK+ I+ V
Sbjct: 491 ESVMLLNLDHTVPEEVIEKIKEIPNIKDVAVINL 524
>gi|163845877|ref|YP_001633921.1| D-3-phosphoglycerate dehydrogenase [Chloroflexus aurantiacus
J-10-fl]
gi|222523594|ref|YP_002568064.1| D-3-phosphoglycerate dehydrogenase [Chloroflexus sp. Y-400-fl]
gi|163667166|gb|ABY33532.1| D-3-phosphoglycerate dehydrogenase [Chloroflexus aurantiacus
J-10-fl]
gi|222447473|gb|ACM51739.1| D-3-phosphoglycerate dehydrogenase [Chloroflexus sp. Y-400-fl]
Length = 525
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G+P +++ D ++ + D G++ VG +LG +NI+ ++GR E
Sbjct: 433 GEPHIVQMDGYFVDFVPQGSLLITYHHDQPGMIGKVGQLLGAADVNISGMYVGRRAPRER 492
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D V+E+++ I+ E
Sbjct: 493 AVMVLTLDEPAPPQVMEQIATIPGIQAAFSVEL 525
>gi|325290387|ref|YP_004266568.1| D-3-phosphoglycerate dehydrogenase [Syntrophobotulus glycolicus DSM
8271]
gi|324965788|gb|ADY56567.1| D-3-phosphoglycerate dehydrogenase [Syntrophobotulus glycolicus DSM
8271]
Length = 527
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + R ++I + D+D +I I + D G+V VG ILGEY INI + +++
Sbjct: 429 LFGKKEGRIVQIDKHRVDIDPQGWLIIIPHEDYPGMVGKVGTILGEYSININSMQVEKTE 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
I + + I + V+ K+ I+ VK+ F++
Sbjct: 489 DIGMNIMIVGVQSDIGSEVMNKIKQLNGIQNVKKVYFDL 527
>gi|172037049|ref|YP_001803550.1| D-3-phosphoglycerate dehydrogenase [Cyanothece sp. ATCC 51142]
gi|171698503|gb|ACB51484.1| D-3-phosphoglycerate dehydrogenase [Cyanothece sp. ATCC 51142]
Length = 525
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 45/92 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ SDG+ R + +V M+ V+ D+ GI+ +G++LG + +NIA +GR
Sbjct: 429 LLSDGEIRITDVDGFPINVPPSNYMLFTVHRDMPGIIGKIGSLLGSFNVNIASMQVGRKI 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D + +L +++ IR
Sbjct: 489 VRGDAVMALSLDDPLPEGLLTEITKVSGIRDA 520
>gi|296123070|ref|YP_003630848.1| D-3-phosphoglycerate dehydrogenase [Planctomyces limnophilus DSM
3776]
gi|296015410|gb|ADG68649.1| D-3-phosphoglycerate dehydrogenase [Planctomyces limnophilus DSM
3776]
Length = 546
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLG--R 58
+F R +++ + + D + ++ + D G++ +G G++ +NIAH +G R
Sbjct: 433 IFGRQFLRLVRVNQFHLDAYLDGTLLLYRHIDRPGVIGTIGTACGQHNVNIAHMAVGRER 492
Query: 59 SQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
++ A++ L +D L + N + V+
Sbjct: 493 NEPGGEALAILNLDNEPSAEALAAVQANPAVTSVQLLRL 531
>gi|78044395|ref|YP_361252.1| iron-sulfur-dependent L-serine dehydratase subunit beta
[Carboxydothermus hydrogenoformans Z-2901]
gi|77996510|gb|ABB15409.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Carboxydothermus hydrogenoformans Z-2901]
Length = 218
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 32/87 (36%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I + + + +AD G V V ++L +GINIA + R Q
Sbjct: 123 GGGAVLITGINGYPVKITAKYPTLVVPHADRPGAVAKVTSVLAWHGINIAQMSVSRQQKG 182
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTI 89
A+ + D + L ++ I
Sbjct: 183 AEALMVIETDQPVDEETLWEIKRLPGI 209
>gi|304437357|ref|ZP_07397316.1| phosphoglycerate dehydrogenase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304369613|gb|EFM23279.1| phosphoglycerate dehydrogenase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 563
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + + R ++I DVD ++ + + G++ +G+I+G GINI+ +G+S
Sbjct: 465 LFGE-EGRIVRINRFRVDVDPHARILICPHINRPGVIGTIGSIMGAAGINISSMQVGKSD 523
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
I L ID I + VL ++ I K F+
Sbjct: 524 RKGMNIMVLTIDHDISDDVLARVLAVEGIFDAKLVNFD 561
>gi|147920120|ref|YP_686117.1| D-3-phosphoglycerate dehydrogenase [uncultured methanogenic
archaeon RC-I]
gi|110621513|emb|CAJ36791.1| D-3-phosphoglycerate dehydrogenase [uncultured methanogenic
archaeon RC-I]
Length = 526
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 42/97 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F R ++IQ D MI + D G++ VG ILG+ INI+ +GR
Sbjct: 430 IFGKSDARIVEIQGYRVDAVPSGTMIVTRHQDRPGVIGKVGMILGKLNINISGMVVGRDA 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + + L+++ + K +
Sbjct: 490 VRGDAVMILTVDDEVPAATLKQMISEAELYDAKYVKL 526
>gi|167759959|ref|ZP_02432086.1| hypothetical protein CLOSCI_02323 [Clostridium scindens ATCC 35704]
gi|167662578|gb|EDS06708.1| hypothetical protein CLOSCI_02323 [Clostridium scindens ATCC 35704]
Length = 223
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 36/94 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ + K+ I+ + + I N D G ++ V L + INIA + R +
Sbjct: 125 GGGRIKVCKLDGIDVNFSGESYTLIIRNVDEPGRIMEVAAALSKAEINIATMQVFRDKRG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D + ++ L I VK
Sbjct: 185 GFAVMVVETDQVVPQEAIDALESKEGIIRVKFLN 218
>gi|148642517|ref|YP_001273030.1| D-3-phosphoglycerate dehydrogenase [Methanobrevibacter smithii ATCC
35061]
gi|148551534|gb|ABQ86662.1| D-3-phosphoglycerate dehydrogenase, SerA [Methanobrevibacter
smithii ATCC 35061]
Length = 524
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 39/92 (42%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
P+ +K+ + DV M D+ G + +G LGEYGINI +GR + A
Sbjct: 433 DPKILKVNDYWVDVKPEGHMFIAKYEDVPGSIGKIGTALGEYGINIGIMQVGRDEKGGRA 492
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
I L +D I V++ + + E
Sbjct: 493 IMILTLDKEIPKEVIKGIQDLDNVYDAIGLEL 524
>gi|118443172|ref|YP_879194.1| D-3-phosphoglycerate dehydrogenase [Clostridium novyi NT]
gi|118133628|gb|ABK60672.1| D-3-phosphoglycerate dehydrogenase [Clostridium novyi NT]
Length = 530
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V S+ + + ++IQ DV M+ + N D+ G++ VG I+G GIN+A +GR
Sbjct: 434 VSSNHEGKIVEIQGYEVDVKPSTHMVFVQNKDVPGVIGQVGTIIGMEGINVATMQVGRKA 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
E+A+ L +D + + ++K I VK
Sbjct: 494 KGENALMILNVDSEVSDESIKKFKEVQDIIEVKA 527
>gi|218247173|ref|YP_002372544.1| D-3-phosphoglycerate dehydrogenase [Cyanothece sp. PCC 8801]
gi|257060245|ref|YP_003138133.1| D-3-phosphoglycerate dehydrogenase [Cyanothece sp. PCC 8802]
gi|218167651|gb|ACK66388.1| D-3-phosphoglycerate dehydrogenase [Cyanothece sp. PCC 8801]
gi|256590411|gb|ACV01298.1| D-3-phosphoglycerate dehydrogenase [Cyanothece sp. PCC 8802]
Length = 525
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ DG+ R + +V M+ V+ D+ GI+ +G++LG + +NIA +GR
Sbjct: 429 LLGDGEIRITDVDGFPINVPPSNYMLFTVHRDMPGIIGKIGSLLGGFNVNIASMQVGRKI 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D + +L +++ IR
Sbjct: 489 VRGDAVMALSLDDPLPEGLLSEITKVAGIRDA 520
>gi|323489160|ref|ZP_08094392.1| D-3-phosphoglycerate dehydrogenase [Planococcus donghaensis MPA1U2]
gi|323397047|gb|EGA89861.1| D-3-phosphoglycerate dehydrogenase [Planococcus donghaensis MPA1U2]
Length = 528
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + R +K+ + DV ++ + + D G++ VG +LG+ +NIA +GRS
Sbjct: 432 LLNGQGARIVKVDDYLVDVVPEGHLLYVSHNDRPGVIGRVGTLLGQENVNIATMQVGRSI 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L ID S S LE+L+ I+ V
Sbjct: 492 VGGSAIMMLSIDKSAETSSLEQLAKLDEIQAVTAINL 528
>gi|238927354|ref|ZP_04659114.1| phosphoglycerate dehydrogenase [Selenomonas flueggei ATCC 43531]
gi|238884636|gb|EEQ48274.1| phosphoglycerate dehydrogenase [Selenomonas flueggei ATCC 43531]
Length = 565
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + + R ++I DVD ++ + + G++ +G+I+G GINI+ +G+S
Sbjct: 467 LFGE-EGRIVRINRFRVDVDPHARILICPHINRPGVIGTIGSIMGAAGINISSMQVGKSD 525
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
I L ID I + VL ++ I K F
Sbjct: 526 RKGMNIMVLTIDHDISDDVLARVLAVEGIFDAKLVNFE 563
>gi|315929501|gb|EFV08695.1| ACT domain protein [Campylobacter jejuni subsp. jejuni 305]
Length = 330
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D MI N DI G++ + ++L INIA F LGR
Sbjct: 235 VFNENEQRIVGLNGFKTDFKPKGKMIIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDG 294
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + ID + VL++L FV+ E
Sbjct: 295 F-GYALAVVLIDEKVQKEVLDELKQLEACVFVQYVEI 330
>gi|295101836|emb|CBK99381.1| L-serine ammonia-lyase [Faecalibacterium prausnitzii L2-6]
Length = 227
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 40/96 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ R +I + D + I N D G + V L INIA + R+ +
Sbjct: 124 GGGRIRVTEIDGVPADFGGDSNTLIIHNEDTPGCIAEVTMSLARRRINIASMQVFRAAAG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
+A+ L D I + + ++++V IR V +
Sbjct: 184 GYAVMVLECDSHIPHVLEQQMAVMPGIRKVTCLNID 219
>gi|309791398|ref|ZP_07685905.1| D-3-phosphoglycerate dehydrogenase [Oscillochloris trichoides DG6]
gi|308226531|gb|EFO80252.1| D-3-phosphoglycerate dehydrogenase [Oscillochloris trichoides DG6]
Length = 525
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 37/88 (42%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G+P ++ D ++ + D G++ VG +LGE +NI+ ++GR +
Sbjct: 433 GEPHIVQADGYFVDFVPQGSLLITYHRDRPGMIGRVGTLLGENDVNISGMYVGRLSPRDR 492
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D VL + I
Sbjct: 493 AMMVLTLDEPASEEVLNLVRALDDIDQA 520
>gi|197302071|ref|ZP_03167132.1| hypothetical protein RUMLAC_00799 [Ruminococcus lactaris ATCC
29176]
gi|197298880|gb|EDY33419.1| hypothetical protein RUMLAC_00799 [Ruminococcus lactaris ATCC
29176]
Length = 222
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 35/94 (37%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ +I I + + + N D G V V ++L + INIA L RS
Sbjct: 124 GGGRINIAQIDGIETNFSGENPTLIVHNQDQPGHVAEVTSMLAQKKINIATLQLYRSGKG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D + LE L I V +
Sbjct: 184 GRAVMVVECDQDVPEDGLEWLEKVEGIIKVTYLK 217
>gi|256810586|ref|YP_003127955.1| D-3-phosphoglycerate dehydrogenase [Methanocaldococcus fervens
AG86]
gi|256793786|gb|ACV24455.1| D-3-phosphoglycerate dehydrogenase [Methanocaldococcus fervens
AG86]
Length = 525
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 45/95 (47%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
++ KP +++ + ++ + + D G + V LG+YGINIA +GR +
Sbjct: 430 ANNKPVILEVDGYEVNFIPEGVLAIVKHVDRPGTIGRVCITLGDYGINIAGMQVGRKEPG 489
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
++ L +D ++ + V+EK+ I+ V
Sbjct: 490 GESVMLLNLDHTVPDEVVEKIKEIPNIKDVAIINL 524
>gi|296332953|ref|ZP_06875410.1| D-3-phosphoglycerate dehydrogenase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|296149804|gb|EFG90696.1| D-3-phosphoglycerate dehydrogenase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
Length = 517
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + R ++I N D ++ I + D G++ VG ILG+ INIA +GR +
Sbjct: 432 FGE---RIVEINGFNIDFYPTGHLVYIQHQDTTGVIGRVGRILGDNDINIATMQVGRKEK 488
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIR 90
AI L D + + ++++L+ I
Sbjct: 489 GGEAIMMLSFDRHLEDKIVKELTEVPDIV 517
>gi|198283146|ref|YP_002219467.1| D-3-phosphoglycerate dehydrogenase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218667460|ref|YP_002425374.1| D-3-phosphoglycerate dehydrogenase [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|198247667|gb|ACH83260.1| D-3-phosphoglycerate dehydrogenase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218519673|gb|ACK80259.1| D-3-phosphoglycerate dehydrogenase [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 527
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 52/97 (53%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + + R +++ I+ ++ + ++ I N D G++ +G +LG GINIA FHLGR +
Sbjct: 431 LVHEHQARLVQLDGIDVEMPLAGDLLYIQNRDEPGLIGRIGGLLGAAGINIAQFHLGREK 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+SF+ +D + +LE+++ + +
Sbjct: 491 PAGAALSFIAVDQPLTEVLLEQVASLPGVLAARMLRL 527
>gi|283954452|ref|ZP_06371972.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni 414]
gi|283794069|gb|EFC32818.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni 414]
Length = 521
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D MI N DI G++ + ++L INIA F LGR
Sbjct: 426 VFNENEQRIVGLNGFKTDFKPKGKMIIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDG 485
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + ID + VL++L FV+ E
Sbjct: 486 F-GYALAVVLIDEKVQKEVLDELKQLEACVFVQYVEI 521
>gi|219850460|ref|YP_002464893.1| D-3-phosphoglycerate dehydrogenase [Chloroflexus aggregans DSM
9485]
gi|219544719|gb|ACL26457.1| D-3-phosphoglycerate dehydrogenase [Chloroflexus aggregans DSM
9485]
Length = 525
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 40/85 (47%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G+P +++ D ++ + D G++ VG +LG +NI+ ++GR E
Sbjct: 433 GEPHIVQMDGYFVDFVPQGSLLITYHHDQPGMIGKVGQLLGAADVNISGMYVGRRAPREQ 492
Query: 65 AISFLCIDGSILNSVLEKLSVNVTI 89
A+ L +D V+E+++ I
Sbjct: 493 AVMVLTLDEPAPPQVMEQVAAIPGI 517
>gi|297530641|ref|YP_003671916.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Geobacillus sp. C56-T3]
gi|297253893|gb|ADI27339.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Geobacillus sp. C56-T3]
Length = 220
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + I++ D G + V ++L + INI H + R +
Sbjct: 126 GGGKIEIVELNGFALKLSGHHPALLIMHNDRYGTIGAVASVLAKQKINIGHMEVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D + + ++++L I V
Sbjct: 186 KEALMAIEVDQPLTDDLIQELEQLPNIIQV 215
>gi|167044704|gb|ABZ09375.1| putative D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding
domain protein [uncultured marine microorganism
HF4000_APKG7H23]
Length = 491
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Query: 4 DGKPRFIKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + +++ + + D+ M+ + D G++ +G I GE+ INI+ +GR
Sbjct: 397 NDQVHLVRVNDFSLDLQPTGRFMMFTEHTDRPGMIGRMGTIAGEHDINISFMEVGRRAPR 456
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A + +D I + L + + V+
Sbjct: 457 GEATMIVGLDDPISDEALAEFRAIPHVSRVRVVAI 491
>gi|225873973|ref|YP_002755432.1| D-3-phosphoglycerate dehydrogenase [Acidobacterium capsulatum ATCC
51196]
gi|225792519|gb|ACO32609.1| D-3-phosphoglycerate dehydrogenase [Acidobacterium capsulatum ATCC
51196]
Length = 525
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V R + + I+ + + +++ + N D+ G++ VG ILG++ INI +F LGRS
Sbjct: 427 VLHGNSARLLNLDGIDIEAPLEGMLLSLRNLDVPGVIGRVGTILGDHQINIGNFALGRSD 486
Query: 61 ST--EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ + +DG++ VL+ L I V+
Sbjct: 487 RDHHGTALAVIQVDGAVTEQVLQALRGVEAITEVRLVTL 525
>gi|225573358|ref|ZP_03782113.1| hypothetical protein RUMHYD_01550 [Blautia hydrogenotrophica DSM
10507]
gi|225039271|gb|EEG49517.1| hypothetical protein RUMHYD_01550 [Blautia hydrogenotrophica DSM
10507]
Length = 222
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 34/94 (36%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ K+ I+ + + + N D G V V ++L +NIA+ L R +
Sbjct: 124 GGGRIMVNKLDGIDVNCSCEMPTLIVHNLDQPGHVCEVTSMLAHKSVNIANMSLYRDRRG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D I + L + V
Sbjct: 184 GRAVMVIETDQPIPEEAVRWLEHLEGVLKVTYIN 217
>gi|205356376|ref|ZP_03223141.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni CG8421]
gi|205345761|gb|EDZ32399.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni CG8421]
Length = 489
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D MI N DI G++ + ++L INIA F LGR
Sbjct: 394 VFNENEQRIVGLNGFKTDFKPKGKMIIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDG 453
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + ID + VL++L FV+ E
Sbjct: 454 F-GYALAVVLIDEKVQKEVLDELKQLEACVFVQYVEI 489
>gi|315453857|ref|YP_004074127.1| D-3-phosphoglycerate dehydrogenase [Helicobacter felis ATCC 49179]
gi|315132909|emb|CBY83537.1| D-3-phosphoglycerate dehydrogenase [Helicobacter felis ATCC 49179]
Length = 525
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFS+ + I D+ MI N D G++ VG+ L ++GINIA F LGR+
Sbjct: 430 VFSEDILKITNIDGFEMDIQPQGTMILFKNTDKPGVIGNVGHTLAKHGINIADFRLGRNA 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D I +++L L V
Sbjct: 490 K-KEALAVILVDTPINSAILHDLQEVPHCLGVSLVSI 525
>gi|261403538|ref|YP_003247762.1| D-3-phosphoglycerate dehydrogenase [Methanocaldococcus vulcanius
M7]
gi|261370531|gb|ACX73280.1| D-3-phosphoglycerate dehydrogenase [Methanocaldococcus vulcanius
M7]
Length = 524
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 43/94 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ KP + + + + + I + D G + V +LG+YGINIA +GR +
Sbjct: 431 NNKPVILDVDGYDVNFIPEGALAIIKHIDRPGTIGRVCILLGDYGINIAGMQVGRKEPGG 490
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
++ L +D ++ V+EK+ I+ V
Sbjct: 491 ESVMLLNLDHTVPEDVIEKIKEIPNIKDVAVINL 524
>gi|317182310|dbj|BAJ60094.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori F57]
Length = 524
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFASHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLKVLEELKNIPACLSVHYVVI 524
>gi|116750521|ref|YP_847208.1| D-3-phosphoglycerate dehydrogenase [Syntrophobacter fumaroxidans
MPOB]
gi|116699585|gb|ABK18773.1| D-3-phosphoglycerate dehydrogenase [Syntrophobacter fumaroxidans
MPOB]
Length = 525
Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V + R I+I + + ++ + + I N D G + +G LG + +NIA+ HL R+
Sbjct: 430 VLQGHEIRLIRINDYRLEAELEGINLLIQNYDKPGTIGLIGTTLGSHQVNIANMHLSRTP 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ AI+ + +D +E L + +I V+Q +
Sbjct: 490 R-DKAIAIIRLDNEAPPEAIETLRRHPSIISVQQVKL 525
>gi|327399776|ref|YP_004340645.1| D-3-phosphoglycerate dehydrogenase [Hippea maritima DSM 10411]
gi|327182405|gb|AEA34586.1| D-3-phosphoglycerate dehydrogenase [Hippea maritima DSM 10411]
Length = 529
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 53/97 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF K R + + + ++++ +I N D GI+ VG ILG++ INIA F LGR Q
Sbjct: 433 VFEPNKARIVYMDGFDMEIELTGNIIVFRNYDKPGIIGKVGEILGKHNINIADFRLGRKQ 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+SF+ +D + +++L+++ + + +
Sbjct: 493 ALGEALSFIKVDQEVNDAILKEILSIDGAISIAKVKI 529
>gi|288932457|ref|YP_003436517.1| D-3-phosphoglycerate dehydrogenase [Ferroglobus placidus DSM 10642]
gi|288894705|gb|ADC66242.1| D-3-phosphoglycerate dehydrogenase [Ferroglobus placidus DSM 10642]
Length = 527
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR--S 59
F R I+I D I ++ D G++ VG + G+Y INIA +GR
Sbjct: 430 FGRDDYRIIRIDRYKVDFVPRGHYIISLHEDKPGVIGRVGTLFGQYNINIAGMIVGRYGD 489
Query: 60 QSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + L +D VLEK+ I
Sbjct: 490 KPGGVQLMLLLVDDPPTEEVLEKMVKLDGIIDATYI 525
>gi|150400998|ref|YP_001324764.1| D-3-phosphoglycerate dehydrogenase [Methanococcus aeolicus
Nankai-3]
gi|150013701|gb|ABR56152.1| D-3-phosphoglycerate dehydrogenase [Methanococcus aeolicus
Nankai-3]
Length = 523
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 42/94 (44%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G P +I D+ ++ I + D GI+ +LG+YG+NIA +GR +
Sbjct: 430 EGAPVLKEINNYKIDIKPEGIVCVIKHMDKPGIIGKASTLLGDYGVNIAGMQVGRQEPGG 489
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
++ L +D I V+ KL I K +
Sbjct: 490 ESVMVLNLDHVITEEVISKLKNIDNIIDAKIIKL 523
>gi|119717608|ref|YP_924573.1| D-3-phosphoglycerate dehydrogenase [Nocardioides sp. JS614]
gi|119538269|gb|ABL82886.1| D-3-phosphoglycerate dehydrogenase [Nocardioides sp. JS614]
Length = 536
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
K R +++ + D++ + + D G+V VG I+G+ GINIA + R A
Sbjct: 444 KERLVEVNGFDVDLEPTEHLAFLTYEDRPGMVGTVGVIIGDAGINIAGMQVARDAKGGRA 503
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ L +D +I VL ++ + V+ +
Sbjct: 504 LVALSVDTAIPAEVLAEMQHAIDAISVRAVDL 535
>gi|310639883|ref|YP_003944641.1| l-serine dehydratase, iron-sulfur-dependent, beta subunit
[Paenibacillus polymyxa SC2]
gi|309244833|gb|ADO54400.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Paenibacillus polymyxa SC2]
Length = 229
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 38/95 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ E ++ + ++++D G + V + LG INIA+ H+ R
Sbjct: 126 GGGSIHVQQLNEFRVNLTGELSTLVLLHSDKPGTLGAVTSALGAADINIAYMHVDRKGRD 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ + D ++ KL + +K
Sbjct: 186 GEALTAIETDSLPTAELIAKLQSLPHMYEIKMINL 220
>gi|331270622|ref|YP_004397114.1| D-3-phosphoglycerate dehydrogenase [Clostridium botulinum
BKT015925]
gi|329127172|gb|AEB77117.1| D-3-phosphoglycerate dehydrogenase [Clostridium botulinum
BKT015925]
Length = 530
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 44/93 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ S+ + + ++IQ DV M+ + N D+ G++ VG I+G IN+A +GR
Sbjct: 434 LSSNHEGKLVEIQGYEVDVKPSTHMLFVQNKDVPGVIGQVGTIIGMENINVATMQVGRKA 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVK 93
E A+ L +D + L K I VK
Sbjct: 494 KGEIALMILNVDSEVAKESLNKFKEIENIIEVK 526
>gi|56419719|ref|YP_147037.1| L-serine dehydratase (L-serine deaminase) subunit beta [Geobacillus
kaustophilus HTA426]
gi|56379561|dbj|BAD75469.1| L-serine dehydratase (L-serine deaminase) beta chain [Geobacillus
kaustophilus HTA426]
Length = 220
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + I++ D G + V ++L + INI H + R +
Sbjct: 126 GGGKIEIVELNGFALKLSGHHPALLIMHNDRYGTIGAVASVLAKQKINIGHMEVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D + + ++++L I V
Sbjct: 186 KEALMAIEVDQPLTDDLIQELEQLPNIIQV 215
>gi|261419382|ref|YP_003253064.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Geobacillus sp. Y412MC61]
gi|319766197|ref|YP_004131698.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Geobacillus sp. Y412MC52]
gi|261375839|gb|ACX78582.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Geobacillus sp. Y412MC61]
gi|317111063|gb|ADU93555.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Geobacillus sp. Y412MC52]
Length = 220
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + I++ D G + V ++L + INI H + R +
Sbjct: 126 GGGKIEIVELNGFALKLSGHHPALLIMHNDRYGTIGAVASVLAKRKINIGHMEVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D + + ++++L I V
Sbjct: 186 KEALMAIEVDQPLTDDLIQELEQLPNIIQV 215
>gi|94967146|ref|YP_589194.1| D-3-phosphoglycerate dehydrogenase [Candidatus Koribacter
versatilis Ellin345]
gi|94549196|gb|ABF39120.1| D-3-phosphoglycerate dehydrogenase [Candidatus Koribacter
versatilis Ellin345]
Length = 531
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V PR + I+ + + ++ I N DI G+V VG ILGE+ +NIA+F LGR
Sbjct: 433 VLHGNSPRLLSFDNIDVEAPLEGTLLVIRNRDIPGVVGRVGTILGEHEVNIANFALGRPS 492
Query: 61 --STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
S +AI+ + +DG + VL++L I +F
Sbjct: 493 GNSGGNAIAAVQVDGPLKEPVLQQLRQQKAILAANVVQF 531
>gi|307747791|gb|ADN91061.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni M1]
Length = 527
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D MI N DI G++ + ++L INIA F LGR
Sbjct: 432 VFNENEQRIVGLNGFKTDFKPKGKMIIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDG 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + ID + VL++L FV+ E
Sbjct: 492 F-GYALAVVLIDEKVQKEVLDELKQLEACVFVQYVEI 527
>gi|166367810|ref|YP_001660083.1| D-3-phosphoglycerate dehydrogenase [Microcystis aeruginosa
NIES-843]
gi|166090183|dbj|BAG04891.1| D-3-phosphoglycerate dehydrogenase [Microcystis aeruginosa
NIES-843]
Length = 525
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 45/92 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ S+G+ R + E +V M+ ++ D+ GI+ +G +LG + +NIA +GR
Sbjct: 429 LLSNGEIRITDLDEFPINVPPSNHMLFTLHQDMPGIIGKIGALLGSFNVNIASMQVGRKI 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D + +L +++ IR
Sbjct: 489 IRGDAVMALSLDDPLPEGLLSEITKVPGIRDA 520
>gi|313896711|ref|ZP_07830259.1| putative phosphoglycerate dehydrogenase [Selenomonas sp. oral taxon
137 str. F0430]
gi|312974628|gb|EFR40095.1| putative phosphoglycerate dehydrogenase [Selenomonas sp. oral taxon
137 str. F0430]
Length = 366
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R ++I DVD ++ + + G++ +G+I+GE G+NI+ +G+S
Sbjct: 270 GTEGRIVRINRFRVDVDPHARILICPHINRPGVIGTIGSIMGEAGVNISAMQVGKSDRAG 329
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
I L +D I + L ++ I K F
Sbjct: 330 TNIMVLTVDHDISDETLARVVALDGIFDAKLVNFE 364
>gi|237745935|ref|ZP_04576415.1| L-serine dehydratase [Oxalobacter formigenes HOxBLS]
gi|229377286|gb|EEO27377.1| L-serine dehydratase [Oxalobacter formigenes HOxBLS]
Length = 222
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIV-NADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
G+ +I I + + + + D G V V L ++GINIA L R
Sbjct: 124 GGGRILVSRIDGITTNFSGDENTLIVHTHYDRPGHVALVTAALAKHGINIATMQLYRRSK 183
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D IL ++EKLS I V
Sbjct: 184 GGQAVMVIECDDPILPGLVEKLSQMEGILKVTYLN 218
>gi|57237720|ref|YP_178968.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni RM1221]
gi|86150274|ref|ZP_01068501.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88597554|ref|ZP_01100788.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni 84-25]
gi|218562511|ref|YP_002344290.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|57166524|gb|AAW35303.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni RM1221]
gi|85839390|gb|EAQ56652.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88190146|gb|EAQ94121.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112360217|emb|CAL35012.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|284926125|gb|ADC28477.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni IA3902]
gi|315058331|gb|ADT72660.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni S3]
gi|315927558|gb|EFV06891.1| phosphoglycerate dehydrogenase [Campylobacter jejuni subsp. jejuni
DFVF1099]
Length = 527
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D MI N DI G++ + ++L INIA F LGR
Sbjct: 432 VFNENEQRIVGLNGFKTDFKPKGKMIIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDG 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + ID + VL++L FV+ E
Sbjct: 492 F-GYALAVVLIDEKVQKEVLDELKQLEACVFVQYVEI 527
>gi|302390335|ref|YP_003826156.1| L-serine ammonia-lyase [Thermosediminibacter oceani DSM 16646]
gi|302200963|gb|ADL08533.1| L-serine ammonia-lyase [Thermosediminibacter oceani DSM 16646]
Length = 219
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 32/90 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ + I D I V+ D GIV V L E G NIA + R
Sbjct: 124 GGGRVKITAIDGFEVDFSGEYPTIITVHRDRPGIVARVTTHLAEKGFNIAQMRVSRKTKG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E A+ + D + + E L I +
Sbjct: 184 EQALMIIETDEPLPEGIKEVLESIEDIYRI 213
>gi|157415148|ref|YP_001482404.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni 81116]
gi|157386112|gb|ABV52427.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni 81116]
Length = 527
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D MI N DI G++ + ++L INIA F LGR
Sbjct: 432 VFNENEQRIVGLNGFKTDFKPKGKMIIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDG 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + ID + VL++L FV+ E
Sbjct: 492 F-GYALAVVLIDEKVQKEVLDELKQLEACVFVQYVEI 527
>gi|320529979|ref|ZP_08031055.1| phosphoglycerate dehydrogenase [Selenomonas artemidis F0399]
gi|320137776|gb|EFW29682.1| phosphoglycerate dehydrogenase [Selenomonas artemidis F0399]
Length = 534
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R ++I DVD ++ + + G++ +G+I+GE G+NI+ +G+S
Sbjct: 438 GTEGRIVRINRFRVDVDPHARILICPHINRPGVIGTIGSIMGEAGVNISAMQVGKSDRAG 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
I L +D I + L ++ I K F
Sbjct: 498 TNIMVLTVDHDISDETLARVVALDGIFDAKLVNFE 532
>gi|315932626|gb|EFV11557.1| phosphoglycerate dehydrogenase [Campylobacter jejuni subsp. jejuni
327]
Length = 527
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D MI N DI G++ + ++L INIA F LGR
Sbjct: 432 VFNENEQRIVGLNGFKTDFKPKGKMIIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDG 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + ID + VL++L FV+ E
Sbjct: 492 F-GYALAVVLIDEKVQKEVLDELKQLEACVFVQYVEI 527
>gi|283956236|ref|ZP_06373716.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1336]
gi|283791956|gb|EFC30745.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1336]
Length = 527
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D MI N DI G++ + ++L INIA F LGR
Sbjct: 432 VFNENEQRIVGLNGFKTDFKPKGKMIIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDG 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + ID + VL++L FV+ E
Sbjct: 492 F-GYALAVVLIDEKVQKEVLDELKQLEACVFVQYVEI 527
>gi|86152140|ref|ZP_01070352.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni 260.94]
gi|315124387|ref|YP_004066391.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85840925|gb|EAQ58175.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni 260.94]
gi|315018109|gb|ADT66202.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 527
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D MI N DI G++ + ++L INIA F LGR
Sbjct: 432 VFNENEQRIVGLNGFKTDFKPKGKMIIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDG 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + ID + VL++L FV+ E
Sbjct: 492 FG-YALAVVLIDEKVQKEVLDELKQLEACVFVQYVEI 527
>gi|86606026|ref|YP_474789.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. JA-3-3Ab]
gi|86554568|gb|ABC99526.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. JA-3-3Ab]
Length = 527
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + R +I E +V M+ ++ D+ GI+ +G +LG Y +NIA +GR
Sbjct: 433 GEREVRITQIDEFPVNVPPSANMLMTLHRDMPGIIGRIGTLLGAYNVNIASMQVGRKIIR 492
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + + +LE++ IR
Sbjct: 493 GDAVMVLSLDDPLPDGILEEVLKQPGIRDAFVVNL 527
>gi|260881561|ref|ZP_05404709.2| phosphoglycerate dehydrogenase [Mitsuokella multacida DSM 20544]
gi|260848763|gb|EEX68770.1| phosphoglycerate dehydrogenase [Mitsuokella multacida DSM 20544]
Length = 558
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 43/94 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R ++I + DVD ++ + + G++ VG +LG G+NI+ +G ++
Sbjct: 462 GTQGRIVRINDFRVDVDPHARILICPHINRPGVIGTVGTLLGGNGVNISAMQVGTTEEEG 521
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ L +D I ++LE + I K F
Sbjct: 522 KNLMVLTVDNDIPAALLETVKALDGIFDAKLVNF 555
>gi|322379237|ref|ZP_08053628.1| D-3-phosphoglycerate dehydrogenase [Helicobacter suis HS1]
gi|321148377|gb|EFX42886.1| D-3-phosphoglycerate dehydrogenase [Helicobacter suis HS1]
Length = 524
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+D + I DV MI N D G++ VG L +Y INIA F LGR+
Sbjct: 429 VFADNLLKITNINGFEMDVKPQGTMILFKNTDKPGVIGNVGQTLAKYDINIADFRLGRNS 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D SI +L L V
Sbjct: 489 K-QEALAVILVDASISPKILHALQEIPYCLSVCLVSI 524
>gi|297584460|ref|YP_003700240.1| D-3-phosphoglycerate dehydrogenase [Bacillus selenitireducens
MLS10]
gi|297142917|gb|ADH99674.1| D-3-phosphoglycerate dehydrogenase [Bacillus selenitireducens
MLS10]
Length = 536
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 42/91 (46%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
PR ++I E +F+ G+ + + + D G++ VG +LG + +NIA +GR AI
Sbjct: 446 PRIVRINEFSFEFQPGKHTLFVQHNDRPGVIGKVGQLLGTHDVNIATMQVGRHSEGGKAI 505
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L D + V+ + V+ E
Sbjct: 506 MLLGTDKACNGDVITAFETFDEVESVQTIEL 536
>gi|210615487|ref|ZP_03290614.1| hypothetical protein CLONEX_02830 [Clostridium nexile DSM 1787]
gi|210150336|gb|EEA81345.1| hypothetical protein CLONEX_02830 [Clostridium nexile DSM 1787]
Length = 222
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 40/95 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK + ++I I+ + + + D G+V + L E +NIA L R
Sbjct: 128 GGGKMKIVRINNIDVEFTGEYSTLIVQQKDTPGVVAHITQALSEQEVNIAFMRLFREDKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A + + D I +VL+K+ N + + +
Sbjct: 188 ANAYTVVESDEPIPEAVLDKIKTNPHVSDLMLIQM 222
>gi|167766000|ref|ZP_02438053.1| hypothetical protein CLOSS21_00491 [Clostridium sp. SS2/1]
gi|167712357|gb|EDS22936.1| hypothetical protein CLOSS21_00491 [Clostridium sp. SS2/1]
Length = 222
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 32/93 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ + I + + + + N D G V V ++L +NIA L R
Sbjct: 124 GGGRIKICTIDGLEANFSGEYTTLVVHNDDQPGHVAEVTSMLAHKSVNIATMQLYRDHRG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ + D I L L I+ V
Sbjct: 184 GSAVMVIECDKEIPEEGLNFLERLEGIQKVTYL 216
>gi|222824187|ref|YP_002575761.1| D-3-phosphoglycerate dehydrogenase [Campylobacter lari RM2100]
gi|222539409|gb|ACM64510.1| D-3-phosphoglycerate dehydrogenase [Campylobacter lari RM2100]
Length = 526
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + + R +++ + D MI + N DI G++ V IL + +NIA F LGR+
Sbjct: 431 IFGENEQRIVELNGFDVDFKPKGKMIILNNNDIPGVIANVSGILAKNNVNIADFRLGRNG 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D I ++LE+L F + E
Sbjct: 491 FGK-ALAVILLDAKISKALLEELRAIDACIFAEYAEI 526
>gi|304406983|ref|ZP_07388637.1| D-3-phosphoglycerate dehydrogenase [Paenibacillus curdlanolyticus
YK9]
gi|304343970|gb|EFM09810.1| D-3-phosphoglycerate dehydrogenase [Paenibacillus curdlanolyticus
YK9]
Length = 530
Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 44/97 (45%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + PR ++I DV +I I + D GI+ VG +LG +NIA +GR
Sbjct: 433 LLTGYGPRIVQIDSYPVDVAPEGNLILISHNDKPGIIGRVGTLLGSNDVNIAAMQVGRKL 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L +D SV+E+++ + K+
Sbjct: 493 VGGAAIMVLTVDKGAAKSVIEEVAQLSDLNSAKEIHL 529
>gi|300866531|ref|ZP_07111221.1| D-3-phosphoglycerate dehydrogenase [Oscillatoria sp. PCC 6506]
gi|300335488|emb|CBN56381.1| D-3-phosphoglycerate dehydrogenase [Oscillatoria sp. PCC 6506]
Length = 527
Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V + + R + E +V R M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 431 VLGEDEIRITSVDEFPVNVSPSRHMLFTLHRDMPGIIGKLGSLLGSFNVNIASMQVGRRI 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D + +L ++ IR
Sbjct: 491 VRGDAVMVLSLDDPLPEGILAEIIKLAGIRDA 522
>gi|37521708|ref|NP_925085.1| D-3-phosphoglycerate dehydrogenase [Gloeobacter violaceus PCC 7421]
gi|35212706|dbj|BAC90080.1| D-3-phosphoglycerate dehydrogenase [Gloeobacter violaceus PCC 7421]
Length = 526
Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 43/97 (44%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ ++ + R I E V R M+ ++ D+ GI+ VG+ LG Y +NIA +GR
Sbjct: 430 LLAEDELRITNIDEFPISVAPSRYMLITLHRDMPGIIGKVGSFLGSYNVNIAGMQVGRKL 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ + +D + +L ++ IR
Sbjct: 490 VRGDAVMMVSLDDPLPEGLLGEIESVPGIRKAYTVNL 526
>gi|325958180|ref|YP_004289646.1| D-3-phosphoglycerate dehydrogenase [Methanobacterium sp. AL-21]
gi|325329612|gb|ADZ08674.1| D-3-phosphoglycerate dehydrogenase [Methanobacterium sp. AL-21]
Length = 525
Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 41/93 (44%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
+P+ I I DV+ M+ D G++ +G +G++ INIA +GR +
Sbjct: 433 DEPKIIMINGYQVDVETEGTMLISKYKDKPGVIGAIGTKIGKHNINIAKMQVGRKELGGE 492
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + +V+E+L +
Sbjct: 493 AVMVLKVDQQVPLNVIEELKQLEDVNDAVAVNL 525
>gi|298491116|ref|YP_003721293.1| D-3-phosphoglycerate dehydrogenase ['Nostoc azollae' 0708]
gi|298233034|gb|ADI64170.1| D-3-phosphoglycerate dehydrogenase ['Nostoc azollae' 0708]
Length = 526
Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 45/92 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ D + + +V + M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 430 LLGDKEIHLTDVDGFPINVPPSKYMLFTLHRDMPGIIGKLGSLLGSFNVNIASMQVGRKI 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID + + +L++++ IR
Sbjct: 490 VRGDAVMALSIDDPLPDGILDEITKVPGIRDA 521
>gi|331091763|ref|ZP_08340595.1| L-serine dehydratase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330402662|gb|EGG82229.1| L-serine dehydratase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 222
Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 40/95 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK + ++I I+ + + + D G+V + L E +NIA L R
Sbjct: 128 GGGKMKIVRINNIDVEFTGEYSTLIVQQTDKPGVVAHITQCLSEENVNIAFMRLFREDKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A + + D I +L+K+ VN ++ + +
Sbjct: 188 ATAFTIVESDEKIPEEILDKIRVNEHVKDLMLIQM 222
>gi|302335864|ref|YP_003801071.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Olsenella uli DSM 7084]
gi|301319704|gb|ADK68191.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Olsenella uli DSM 7084]
Length = 529
Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 33/95 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ R I + ++ + + + D G++ + L NIA R +
Sbjct: 128 GGGRIRIGAINGVRVEISGDYPTLFVTHLDRPGVLASLTGALSASSSNIATMRTYRERRG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A + +D I +L LS + + +
Sbjct: 188 GSAHTVFELDDGIDPDLLSGLSAAPNVVSARVVDI 222
>gi|209523822|ref|ZP_03272375.1| D-3-phosphoglycerate dehydrogenase [Arthrospira maxima CS-328]
gi|209495854|gb|EDZ96156.1| D-3-phosphoglycerate dehydrogenase [Arthrospira maxima CS-328]
Length = 527
Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 45/92 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ D + R I + +V R M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 431 LLGDREIRVTNIDDFPINVPPTRYMLFTLHRDMPGIIGKIGSLLGSFNVNIASMQVGRKI 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D + + +L ++ IR
Sbjct: 491 VRGEAVMVLSLDDPLPDGLLSEIMKVAGIRDA 522
>gi|224370615|ref|YP_002604779.1| D-3-phosphoglycerate dehydrogenase [Desulfobacterium autotrophicum
HRM2]
gi|223693332|gb|ACN16615.1| SerA1 [Desulfobacterium autotrophicum HRM2]
Length = 526
Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F PR I+I + +V + I N D G + +G LG++ INIA +GR
Sbjct: 430 IFGKDDPRIIRINKFRLEVIPDGHLALIHNIDKPGSIGNIGTCLGKHDINIAKMMVGRED 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ I FL D I + E++S + + F +
Sbjct: 490 DGDRNIIFLQTDTPISAEIAEEISGLGLVNSM--VTFEL 526
>gi|261406015|ref|YP_003242256.1| D-3-phosphoglycerate dehydrogenase [Paenibacillus sp. Y412MC10]
gi|261282478|gb|ACX64449.1| D-3-phosphoglycerate dehydrogenase [Paenibacillus sp. Y412MC10]
Length = 530
Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 42/88 (47%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R +++ + D+ +I I + D GI+ VG +LGE +NIA +GR AI
Sbjct: 440 RIVRLDKFPVDISPEGHLILISHNDKPGIIGRVGTLLGENDVNIASMQVGRKVIGGEAIM 499
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQF 95
L +D + VL KL+ + +Q
Sbjct: 500 LLTVDKDVPKDVLIKLTGLSELNTAQQI 527
>gi|260588469|ref|ZP_05854382.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Blautia
hansenii DSM 20583]
gi|331082254|ref|ZP_08331381.1| L-serine dehydratase [Lachnospiraceae bacterium 6_1_63FAA]
gi|260540944|gb|EEX21513.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Blautia
hansenii DSM 20583]
gi|330403048|gb|EGG82613.1| L-serine dehydratase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 223
Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 41/95 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK + +K+ +I D + + D G+V + +L E G+NIA L R +
Sbjct: 129 GGGKVKIVKLNQIEVDFTGEYSTLIVSQTDKPGVVAHITRVLSEEGVNIAFMRLFREEKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A + + D I VL+++ N + + +
Sbjct: 189 AAAFTVVESDEKIPAKVLDRIRENPLVSDITLVQL 223
>gi|78043987|ref|YP_359554.1| iron-sulfur-dependent L-serine dehydratase subunit beta
[Carboxydothermus hydrogenoformans Z-2901]
gi|77996102|gb|ABB15001.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Carboxydothermus hydrogenoformans Z-2901]
Length = 218
Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 31/88 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I + + + + D G V V +++ +GINIA + R +
Sbjct: 123 GGGAVLITDINGYPVRITAKYPTLIVPHNDQPGAVAKVTSVIAWHGINIAQMSVARQKKG 182
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIR 90
A+ + D I +++ I
Sbjct: 183 AEALMVIETDQPIDEETCKEIKRLPGIT 210
>gi|217966485|ref|YP_002351991.1| D-3-phosphoglycerate dehydrogenase [Dictyoglomus turgidum DSM 6724]
gi|217335584|gb|ACK41377.1| D-3-phosphoglycerate dehydrogenase [Dictyoglomus turgidum DSM 6724]
Length = 525
Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 48/90 (53%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S + R + IQ+ + D+ + + M+ + D GI+ VG +LG+ INIA +GR +
Sbjct: 431 SRNQERILAIQDYHLDLALSQYMLIAFHIDRPGIIGQVGTVLGKNNINIAAMQVGRKEIG 490
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ L ID + + VL +L I+ V
Sbjct: 491 KDAVMVLVIDNPVDDKVLRELKNIENIKEV 520
>gi|291558791|emb|CBL37591.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[butyrate-producing bacterium SSC/2]
Length = 222
Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 32/93 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ + I + + + + N D G V V ++L +NIA L R
Sbjct: 124 GGGRIKICTIDGLEANFSGEYTTLVVHNDDQPGHVAEVTSMLAHKSVNIATMQLYRDHRG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ + D I L L I+ V
Sbjct: 184 GSAVMVIECDKEIPEEGLNFLERLEGIQKVTYI 216
>gi|149176983|ref|ZP_01855592.1| phosphoglycerate dehydrogenase [Planctomyces maris DSM 8797]
gi|148844238|gb|EDL58592.1| phosphoglycerate dehydrogenase [Planctomyces maris DSM 8797]
Length = 541
Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR-- 58
+F R ++ E D + ++ + D+ G++ ++G +LG + +NIAH LGR
Sbjct: 432 IFGQDFLRLTRLDEFYLDGYLDGNLLIYRHNDVPGLIGYIGTVLGNHNVNIAHMALGRLQ 491
Query: 59 SQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+Q AI+ L +DG + + + ++S + + VK +
Sbjct: 492 NQPGGEAIAVLNVDGEVPEAAIAEVSSHKDVSCVKLIKM 530
>gi|75909963|ref|YP_324259.1| D-3-phosphoglycerate dehydrogenase [Anabaena variabilis ATCC 29413]
gi|75703688|gb|ABA23364.1| D-3-phosphoglycerate dehydrogenase [Anabaena variabilis ATCC 29413]
Length = 526
Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 44/92 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ D + + +V + M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 430 LLGDKEIHLTDVDGFPINVPPSKYMLFTLHRDMPGIIGKLGSLLGSFNVNIASMQVGRKI 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID + + +L +++ IR
Sbjct: 490 VRGDAVMALSIDDPLPDGILAEITKVPGIRDA 521
>gi|288559935|ref|YP_003423421.1| phosphoglycerate dehydrogenase SerA [Methanobrevibacter ruminantium
M1]
gi|288542645|gb|ADC46529.1| phosphoglycerate dehydrogenase SerA [Methanobrevibacter ruminantium
M1]
Length = 524
Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 34/92 (36%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ + IK+ DV M DI G + +G GE INI +GR + A
Sbjct: 433 EAKIIKVNGYWVDVKPEGNMFIAKYKDIPGSIGAIGTKFGEENINIGIMQVGRDSTGGEA 492
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
I L +D ++K+ + +
Sbjct: 493 IMILTLDERPSKEAVKKIKDLDNVSDATCLKL 524
>gi|284052483|ref|ZP_06382693.1| D-3-phosphoglycerate dehydrogenase [Arthrospira platensis str.
Paraca]
gi|291569633|dbj|BAI91905.1| D-3-phosphoglycerate dehydrogenase [Arthrospira platensis NIES-39]
Length = 527
Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 45/92 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ D + R I + +V R M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 431 LLGDREIRVTNIDDFPINVPPTRYMLFTLHRDMPGIIGKIGSLLGSFNVNIASMQVGRKI 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D + + +L ++ IR
Sbjct: 491 VRGEAVMVLSLDDPLPDGLLSEIMKVAGIRDA 522
>gi|86608852|ref|YP_477614.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557394|gb|ABD02351.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 526
Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + R +I E +V M+ ++ D+ GI+ +G +LG Y +NIA +GR
Sbjct: 432 GEREVRITQIDEFPVNVPPSANMLMTLHRDMPGIIGRIGTLLGAYNVNIASMQVGRKIIR 491
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + + +LE++ IR
Sbjct: 492 GDAVMVLSLDDPLPDGILEEVLKQPGIRDAFVVNL 526
>gi|329929876|ref|ZP_08283552.1| phosphoglycerate dehydrogenase [Paenibacillus sp. HGF5]
gi|328935854|gb|EGG32315.1| phosphoglycerate dehydrogenase [Paenibacillus sp. HGF5]
Length = 530
Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 42/88 (47%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R +++ + D+ +I I + D GI+ VG +LGE +NIA +GR AI
Sbjct: 440 RIVRLDKFPVDISPEGHLILISHNDKPGIIGRVGTLLGENDVNIASMQVGRKVIGGEAIM 499
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQF 95
L +D + VL KL+ + +Q
Sbjct: 500 LLTVDKDVPKDVLIKLTGLSELNTAQQI 527
>gi|323141567|ref|ZP_08076450.1| phosphoglycerate dehydrogenase [Phascolarctobacterium sp. YIT
12067]
gi|322413909|gb|EFY04745.1| phosphoglycerate dehydrogenase [Phascolarctobacterium sp. YIT
12067]
Length = 528
Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 43/96 (44%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F +P+ ++I + + D + ++ + + ++ + ILG GINI +G +
Sbjct: 430 LFDGKQPKIVQIDQYHVDFNPEGYLLLAPHVNKPNMIGQMATILGSAGININGMQVGSTP 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ I + + I N ++ +L I VK
Sbjct: 490 KSDTNIMAIAVGDDIPNDIMLQLRGVEGIIDVKLIN 525
>gi|317497191|ref|ZP_07955516.1| L-serine dehydratase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316895517|gb|EFV17674.1| L-serine dehydratase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 222
Score = 99.3 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 32/93 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ + I + + + + N D G V V ++L +NIA L R
Sbjct: 124 GGGRIKICTIDGLEANFSGEYTTLVVHNDDQPGHVAEVTSMLAHKAVNIATMQLYRDHRG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ + D I L L I+ V
Sbjct: 184 GSAVMVIECDKEIPEEGLNFLERLEGIQKVTYL 216
>gi|22297868|ref|NP_681115.1| D-3-phosphoglycerate dehydrogenase [Thermosynechococcus elongatus
BP-1]
gi|22294046|dbj|BAC07877.1| D-3-phosphoglycerate dehydrogenase [Thermosynechococcus elongatus
BP-1]
Length = 527
Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 43/97 (44%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ S + R I + V R M+ ++ D+ GI+ +G LG + +NIA +GR
Sbjct: 431 LLSHNELRITSIDDFPISVAPTRYMLLTLHRDMPGIIGKIGTQLGSFNVNIASMQVGRKM 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A+ + +D + +LE++ IR
Sbjct: 491 VRGNAVMVISLDDPLPEGLLEEILKVPGIRDAYIVNL 527
>gi|319892223|ref|YP_004149098.1| L-serine dehydratase, beta subunit [Staphylococcus pseudintermedius
HKU10-03]
gi|317161919|gb|ADV05462.1| L-serine dehydratase, beta subunit [Staphylococcus pseudintermedius
HKU10-03]
gi|323464680|gb|ADX76833.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit 2
[Staphylococcus pseudintermedius ED99]
Length = 221
Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 37/90 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK + I + + + + D G + V NILG+ GIN+ + R +
Sbjct: 126 GGGKIEIVAINGFPLAISGNYPTLLVFHQDTFGTIGKVANILGDDGINVGSMQVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ +D + + +L+ + + V
Sbjct: 186 DQALMTCELDDEVNDKILDAIRQVPGVVTV 215
>gi|160943482|ref|ZP_02090715.1| hypothetical protein FAEPRAM212_00972 [Faecalibacterium prausnitzii
M21/2]
gi|158445161|gb|EDP22164.1| hypothetical protein FAEPRAM212_00972 [Faecalibacterium prausnitzii
M21/2]
gi|295103745|emb|CBL01289.1| L-serine ammonia-lyase [Faecalibacterium prausnitzii SL3/3]
Length = 226
Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 39/96 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ R +I + D + I N D G + V L INIA + R+ +
Sbjct: 124 GGGRIRVTEIDGVPADFGGDSNTLIIHNEDTPGCIAEVTMALALRRINIASMQVFRAAAG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
+A+ L D I +++ +L+V + V +
Sbjct: 184 GYAVMVLECDSHIPHALERQLAVMPGLLKVTCLNVD 219
>gi|121612205|ref|YP_001000566.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005499|ref|ZP_02271257.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni 81-176]
gi|87249339|gb|EAQ72299.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni 81-176]
Length = 527
Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D M+ N DI G++ + ++L INIA F LGR
Sbjct: 432 VFNENEQRIVGLNGFKTDFKPKGKMVIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDG 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + ID + VL++L FV+ E
Sbjct: 492 F-GYALAVVLIDEKVQKEVLDELKQLEACVFVQYVEI 527
>gi|86153461|ref|ZP_01071665.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|85843187|gb|EAQ60398.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni HB93-13]
Length = 527
Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D M+ N DI G++ + ++L INIA F LGR
Sbjct: 432 VFNENEQRIVGLNGFKTDFKPKGKMVIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDG 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + ID + VL++L FV+ E
Sbjct: 492 F-GYALAVVLIDEKVQKEVLDELKQLEACVFVQYVEI 527
>gi|225849496|ref|YP_002729661.1| D-3-phosphoglycerate dehydrogenase [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643873|gb|ACN98923.1| phosphoglycerate dehydrogenase [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 529
Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F D PR + + D++ +++ N D+ G++ +G IL + INIA F LGR +
Sbjct: 434 FYDKLPRIMLVDNYWIDIEPSGVILMFENKDVPGVIGKLGTILARHNINIAGFRLGRLEK 493
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ L +D + +VLE++ I KQ
Sbjct: 494 GKIALGALQLDDKLNEAVLEEIHQIPEIIKAKQV 527
>gi|34557674|ref|NP_907489.1| D-3-phosphoglycerate dehydrogenase [Wolinella succinogenes DSM
1740]
gi|34483391|emb|CAE10389.1| D-3-PHOSPHOGLYCERATE DEHYDROGENASE [Wolinella succinogenes]
Length = 528
Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + R ++I D++ MI N D+ G++ +G L ++ INIA F LGR+
Sbjct: 433 VFDENVQRIVEINGFGLDIEPKGRMILFKNTDVPGVIGMIGTTLAKHQINIADFRLGRNN 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIR 90
A++ + +D + V+E+L
Sbjct: 493 H-NQALAVIIVDDDVKKEVIEELRAIKACL 521
>gi|152990413|ref|YP_001356135.1| D-3-phosphoglycerate dehydrogenase [Nitratiruptor sp. SB155-2]
gi|151422274|dbj|BAF69778.1| D-3-phosphoglycerate dehydrogenase [Nitratiruptor sp. SB155-2]
Length = 529
Score = 99.3 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + R + I DV+ MI N D+ G++ VG IL ++ INIA F LGR
Sbjct: 434 IFEENVQRIVDINNFALDVEPKGKMILFKNTDVPGVIGEVGMILAKHNINIADFRLGRDN 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
HA++ + +D + VL++LS V
Sbjct: 494 HG-HALAVIIVDDDVSKEVLKELSNLKACISVSY 526
>gi|331086303|ref|ZP_08335383.1| L-serine dehydratase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330406069|gb|EGG85592.1| L-serine dehydratase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 222
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 43/95 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK + ++I +I+ + + + D G+V + L E +NIA L R
Sbjct: 128 GGGKMKIVRINQIDVEFTGEYSTLIVSQTDKPGVVAHITQCLSEENVNIAFMRLFREDKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A + + D +I +SVLEK+ + + + +
Sbjct: 188 ANAFTVVESDETIPSSVLEKIKTHEHVSDLMLIQM 222
>gi|308069541|ref|YP_003871146.1| D-3-phosphoglycerate dehydrogenase (PGDH) [Paenibacillus polymyxa
E681]
gi|305858820|gb|ADM70608.1| D-3-phosphoglycerate dehydrogenase (PGDH) [Paenibacillus polymyxa
E681]
Length = 530
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 45/98 (45%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + R +++ + DV + I + D GI+ VG +LGE G+NIA +GR
Sbjct: 433 LLAGYGERIVRLNQFPVDVAPEAHFLLISHNDKPGIIGRVGTLLGENGVNIASMQVGRKI 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
AI L +D ++ VL +L + ++ +
Sbjct: 493 VGGEAIMILTVDKAVPKDVLIQLVGLPELNTAQEVVLD 530
>gi|325662533|ref|ZP_08151136.1| L-serine dehydratase [Lachnospiraceae bacterium 4_1_37FAA]
gi|325471229|gb|EGC74454.1| L-serine dehydratase [Lachnospiraceae bacterium 4_1_37FAA]
Length = 222
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 43/95 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK + ++I +I+ + + + D G+V + L E +NIA L R
Sbjct: 128 GGGKMKIVRINQIDVEFTGEYSTLIVSQTDKPGVVAHITQCLSEENVNIAFMRLFREDKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A + + D +I +SVL+K+ + + + +
Sbjct: 188 ANAFTVVESDETIPSSVLDKIKTHEHVSDLMLIQM 222
>gi|292669667|ref|ZP_06603093.1| phosphoglycerate dehydrogenase [Selenomonas noxia ATCC 43541]
gi|292648464|gb|EFF66436.1| phosphoglycerate dehydrogenase [Selenomonas noxia ATCC 43541]
Length = 526
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 43/95 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R ++I DVD ++ + + G++ +G+I+GE GINI+ +G+S
Sbjct: 430 GTEGRIVRINRFRVDVDPHARILICPHINRPGVIGMIGSIMGEAGINISSMQVGKSDREG 489
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
I L ID I + L ++ I K F
Sbjct: 490 MNIMVLTIDHDIPDDTLARVLAVDGIFDAKLVNFE 524
>gi|182415332|ref|YP_001820398.1| D-3-phosphoglycerate dehydrogenase [Opitutus terrae PB90-1]
gi|177842546|gb|ACB76798.1| D-3-phosphoglycerate dehydrogenase [Opitutus terrae PB90-1]
Length = 529
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 40/93 (43%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
+ R + + +V ++ + N D G+V +G ILG+ G+NIA L R
Sbjct: 437 NQARIVSVNGREVEVAAEGKLLVLENLDQPGMVGEIGTILGQDGVNIADMSLSRLIPGGT 496
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A + +D ++ + + + I+ K +
Sbjct: 497 AYMVVRVDTEPSDNARKIIKGHPAIKQAKFVQL 529
>gi|57242228|ref|ZP_00370167.1| D-3-phosphoglycerate dehydrogenase [Campylobacter upsaliensis
RM3195]
gi|57016908|gb|EAL53690.1| D-3-phosphoglycerate dehydrogenase [Campylobacter upsaliensis
RM3195]
Length = 527
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D M+ N DI G++ + + L INIA F LGR
Sbjct: 432 VFNENEQRIVGLNGFKTDFKPKGKMLIFKNKDIPGVISKISSTLAAQNINIADFRLGRDG 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + +D I VL++L+ FV+ E
Sbjct: 492 F-GYALAVVLVDEVISKEVLDELNKLEVCVFVQYVEI 527
>gi|150391963|ref|YP_001322012.1| D-3-phosphoglycerate dehydrogenase [Alkaliphilus metalliredigens
QYMF]
gi|149951825|gb|ABR50353.1| D-3-phosphoglycerate dehydrogenase [Alkaliphilus metalliredigens
QYMF]
Length = 526
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 44/97 (45%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ R + + FDV M+ N D G++ +G++LGE +NIA + R
Sbjct: 430 VFAKKDMRIVDVNGFVFDVTPTPYMLVANNTDKPGMIGKMGSLLGENNVNIATMQVSRKH 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ FL +D + L ++ I +K +
Sbjct: 490 KDKEAMMFLAVDSEVNKETLNIINKAEGILQIKFVKL 526
>gi|315638687|ref|ZP_07893861.1| phosphoglycerate dehydrogenase [Campylobacter upsaliensis JV21]
gi|315481311|gb|EFU71941.1| phosphoglycerate dehydrogenase [Campylobacter upsaliensis JV21]
Length = 527
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D M+ N DI G++ + + L INIA F LGR
Sbjct: 432 VFNENEQRIVGLNGFKTDFKPKGKMLIFKNKDIPGVISKISSTLAAQNINIADFRLGRDG 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + +D I VL++L+ FV+ E
Sbjct: 492 F-GYALAVVLVDEVISKEVLDELNKLEVCVFVQYVEI 527
>gi|159897613|ref|YP_001543860.1| D-3-phosphoglycerate dehydrogenase [Herpetosiphon aurantiacus ATCC
23779]
gi|159890652|gb|ABX03732.1| D-3-phosphoglycerate dehydrogenase [Herpetosiphon aurantiacus ATCC
23779]
Length = 524
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 2 FSD----GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLG 57
F G+ ++I E D+ M+ + D G + +G +LG INI+ H+G
Sbjct: 425 FGGTVVRGEAHIVQINEFWLDLVPTSSMLFTFHQDRPGFIGRIGTLLGTADINISAMHVG 484
Query: 58 RSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
RS AI L +D +I + L ++ V I
Sbjct: 485 RSSPRGTAIMVLTVDEAIPSETLTDINNQVDIERA 519
>gi|289193097|ref|YP_003459038.1| D-3-phosphoglycerate dehydrogenase [Methanocaldococcus sp.
FS406-22]
gi|288939547|gb|ADC70302.1| D-3-phosphoglycerate dehydrogenase [Methanocaldococcus sp.
FS406-22]
Length = 524
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ KP +++ ++ + + D GI+ VG LG+YGINIA +GR +
Sbjct: 431 NNKPVILEVDGYEVSFIPEGVLAIVKHIDRPGIIGRVGVTLGDYGINIAGMQVGRKEPGG 490
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
++ + +D ++ + V+EKL I+ +
Sbjct: 491 DSVMLINLDHTVPDEVVEKLKKIPNIKDIAIVNL 524
>gi|254422032|ref|ZP_05035750.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. PCC 7335]
gi|196189521|gb|EDX84485.1| D-3-phosphoglycerate dehydrogenase [Synechococcus sp. PCC 7335]
Length = 526
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + R I + +V + M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 430 LLGGSEVRIIDMDGFPINVPPTQYMLFTLHRDMPGIIGKIGSLLGSFNVNIASMQVGRKI 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID + +LE++ IR
Sbjct: 490 VRGDAVMVLSIDDPLPAGILEEIKKEQGIRDA 521
>gi|87312269|ref|ZP_01094368.1| phosphoglycerate dehydrogenase [Blastopirellula marina DSM 3645]
gi|87285007|gb|EAQ76942.1| phosphoglycerate dehydrogenase [Blastopirellula marina DSM 3645]
Length = 539
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + PR I + + + + + D+ GI+ VG I G + +NIA +GRS
Sbjct: 433 LFGNDMPRLILVDGQRLEAYLDGTLFLFAHNDVPGIIGRVGTIFGNHNVNIAQMAVGRSS 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +DG+ S ++++ + I + E
Sbjct: 493 TGG-AVGVLNLDGAPPQSAVDEVLKSADITTARIIEL 528
>gi|139436893|ref|ZP_01771053.1| Hypothetical protein COLAER_00024 [Collinsella aerofaciens ATCC
25986]
gi|133776540|gb|EBA40360.1| Hypothetical protein COLAER_00024 [Collinsella aerofaciens ATCC
25986]
Length = 535
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 40/95 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R +I + D+ + + + D+ G++ + N+L +NIA R++
Sbjct: 135 GGGKMRISRINGVGVDISGMYSTLFVAHKDVPGVLAALTNLLAYAHVNIAFCRTYRTEVG 194
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A S DG+ ++V+ L + + E
Sbjct: 195 GQAYSVFETDGAPDDTVVPMLRKLDNVDYATFIEL 229
>gi|159027379|emb|CAO90566.1| serA [Microcystis aeruginosa PCC 7806]
Length = 525
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 42/88 (47%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G+ R + E +V M+ ++ D+ GI+ +G +LG + +NIA +GR
Sbjct: 433 GEIRITDLDEFPINVPPSNHMLFTLHQDMPGIIGKIGALLGSFNVNIASMQVGRKIIRGD 492
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D + +L +++ IR
Sbjct: 493 AVMALSLDDPLPEGLLSEITKVPGIRDA 520
>gi|332178487|gb|AEE14176.1| D-3-phosphoglycerate dehydrogenase [Thermodesulfobium narugense DSM
14796]
Length = 528
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 46/95 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ SD KPR I+I D ++ + D GI+ G ILG+ INIA LGR+
Sbjct: 431 ILSDQKPRIIEIDSYRVDAFPEGYLLVSRHRDKPGIIGRFGTILGKNNINIAGMQLGRNL 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
++ A+ L +D + + VL +L I ++
Sbjct: 491 TSGLAVMILSVDSEVNDDVLRELISGGDIEELRSI 525
>gi|223039567|ref|ZP_03609854.1| phosphoglycerate dehydrogenase [Campylobacter rectus RM3267]
gi|222879138|gb|EEF14232.1| phosphoglycerate dehydrogenase [Campylobacter rectus RM3267]
Length = 525
Score = 98.6 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + R + I D MI N D+ G++ + IL INIA F LGR
Sbjct: 430 VFGENQQRIVTINGFKTDFKPKGKMIIFKNNDVPGVIAQISTILAAEKINIADFRLGRDD 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
A++ + +D I L KL+ + K
Sbjct: 490 H-GMALAVVLVDEKITKETLAKLNELDVCVWAKY 522
>gi|149193714|ref|ZP_01870812.1| D-3-PHOSPHOGLYCERATE DEHYDROGENASE [Caminibacter mediatlanticus
TB-2]
gi|149135667|gb|EDM24145.1| D-3-PHOSPHOGLYCERATE DEHYDROGENASE [Caminibacter mediatlanticus
TB-2]
Length = 522
Score = 98.6 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ PR ++ + + + + MI N D+ G++ VG L ++ INIA F LGR++
Sbjct: 430 ENHPRVVEFKGFDLEFEPKGKMIFFKNTDVPGVIGEVGMTLAKHNINIADFRLGRNKE-G 488
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ + +D + VL +L V E
Sbjct: 489 QAMAVIIVDNDVNEEVLNELKKLKAALSVAYAEI 522
>gi|315646394|ref|ZP_07899512.1| D-3-phosphoglycerate dehydrogenase [Paenibacillus vortex V453]
gi|315278037|gb|EFU41357.1| D-3-phosphoglycerate dehydrogenase [Paenibacillus vortex V453]
Length = 530
Score = 98.6 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 42/88 (47%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R +++ + D+ +I I + D GI+ VG +LGE +NIA +GR AI
Sbjct: 440 RIVRLDKFPVDISPEGHLILISHNDKPGIIGRVGTLLGENDVNIASMQVGRKVIGGEAIM 499
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQF 95
L +D + VL KL+ + +Q
Sbjct: 500 LLTVDKDVPKDVLIKLTGLAELNTAQQI 527
>gi|297624968|ref|YP_003706402.1| L-serine dehydratase, iron-sulfur-dependent subunit beta [Truepera
radiovictrix DSM 17093]
gi|297166148|gb|ADI15859.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Truepera
radiovictrix DSM 17093]
Length = 238
Score = 98.6 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 37/93 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G R +++ + + + D G + V IL + G+NIA H R Q
Sbjct: 123 GGGLVRVVRVNGFEILFSGAYHTLLVGHTDQPGAIATVARILADDGVNIATLHCARRQRG 182
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ L ID VL+ LS + +++
Sbjct: 183 GAAMMSLEIDRRPAQFVLDYLSQLRVVSWLRML 215
>gi|256372302|ref|YP_003110126.1| D-3-phosphoglycerate dehydrogenase [Acidimicrobium ferrooxidans DSM
10331]
gi|256008886|gb|ACU54453.1| D-3-phosphoglycerate dehydrogenase [Acidimicrobium ferrooxidans DSM
10331]
Length = 527
Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 42/91 (46%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+PR + + +V R M+ + N D G+V VG++LG+ G +I + A
Sbjct: 431 EPRVVLVDGHWVEVPPSRWMLVVRNVDRPGMVGVVGSLLGQAGRSIDAMAVSPRTDDGTA 490
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ L +DG I + VL +L I + +
Sbjct: 491 LMVLGVDGPIPDEVLTELDATDGIIYARTVT 521
>gi|229824710|ref|ZP_04450779.1| hypothetical protein GCWU000182_00058 [Abiotrophia defectiva ATCC
49176]
gi|229791039|gb|EEP27153.1| hypothetical protein GCWU000182_00058 [Abiotrophia defectiva ATCC
49176]
Length = 206
Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 37/93 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ + KI I + + + N D G V V L G NIA+ L R++
Sbjct: 114 GGGRIKVNKIDGIEVNFSGVLPTLIVNNIDAPGHVAAVAGTLSRSGFNIANMQLYRNKRG 173
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ + +D + +++++ + V
Sbjct: 174 GTAVMIVEMDQKMSPELIKEVESLKGVLRVTYV 206
>gi|84489937|ref|YP_448169.1| D-3-phosphoglycerate dehydrogenase [Methanosphaera stadtmanae DSM
3091]
gi|84373256|gb|ABC57526.1| SerA [Methanosphaera stadtmanae DSM 3091]
Length = 524
Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 46/97 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V + + + I I + + + + M I D+ G + +G ILG+Y INIA +GR
Sbjct: 428 VVENNEAKIISIDDYDVRLTLEGKMAIIKYVDLPGTIGKIGKILGDYKINIAEMQVGRQT 487
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L +D I V+ KL + I FVK +
Sbjct: 488 EGGEAIMVLKVDQEITEEVVSKLEDDNDIDFVKPVKL 524
>gi|16330470|ref|NP_441198.1| D-3-phosphoglycerate dehydrogenase [Synechocystis sp. PCC 6803]
gi|3122863|sp|P73821|SERA_SYNY3 RecName: Full=D-3-phosphoglycerate dehydrogenase; Short=PGDH
gi|1652961|dbj|BAA17878.1| phosphoglycerate dehydrogenase [Synechocystis sp. PCC 6803]
Length = 554
Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 47/92 (51%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ S+G+ R + E +V M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 458 LLSNGEIRITDVDEFPINVPPNNYMLFTLHRDMPGIIGKIGSLLGSFNVNIASMQVGRKI 517
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
AI L +D + + +L +++ IR
Sbjct: 518 VRGDAIMALSLDDPLPDGLLSEITKVAGIRDA 549
>gi|242242988|ref|ZP_04797433.1| phosphoglycerate dehydrogenase [Staphylococcus epidermidis W23144]
gi|242233589|gb|EES35901.1| phosphoglycerate dehydrogenase [Staphylococcus epidermidis W23144]
Length = 531
Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + + D + + + D GIV GN+LG +GINIA LGR+
Sbjct: 433 VFAGFGPRIVRINDYSLDFKPNQYQLVTCHKDKPGIVGQTGNLLGSHGINIASMTLGRND 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ L ID V++ L+ +
Sbjct: 493 AGGDALMILSIDQQASEEVIKILNETSGFNKI 524
>gi|27468319|ref|NP_764956.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus epidermidis ATCC
12228]
gi|57867245|ref|YP_188860.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus epidermidis
RP62A]
gi|251811113|ref|ZP_04825586.1| phosphoglycerate dehydrogenase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875855|ref|ZP_06284722.1| phosphoglycerate dehydrogenase [Staphylococcus epidermidis SK135]
gi|293366330|ref|ZP_06613010.1| phosphoglycerate dehydrogenase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|27315865|gb|AAO05000.1|AE016748_234 D-3-phosphoglycerate dehydrogenase [Staphylococcus epidermidis ATCC
12228]
gi|57637903|gb|AAW54691.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus epidermidis
RP62A]
gi|251805333|gb|EES57990.1| phosphoglycerate dehydrogenase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281294880|gb|EFA87407.1| phosphoglycerate dehydrogenase [Staphylococcus epidermidis SK135]
gi|291319568|gb|EFE59934.1| phosphoglycerate dehydrogenase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329737454|gb|EGG73708.1| phosphoglycerate dehydrogenase [Staphylococcus epidermidis VCU028]
gi|329737488|gb|EGG73741.1| phosphoglycerate dehydrogenase [Staphylococcus epidermidis VCU045]
Length = 531
Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + + D + + + D GIV GN+LG +GINIA LGR+
Sbjct: 433 VFAGFGPRIVRINDYSLDFKPNQYQLVTCHKDKPGIVGQTGNLLGSHGINIASMTLGRND 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ L ID V++ L+ +
Sbjct: 493 AGGDALMILSIDQQASEEVIKILNETSGFNKI 524
>gi|110598440|ref|ZP_01386712.1| D-3-phosphoglycerate dehydrogenase [Chlorobium ferrooxidans DSM
13031]
gi|110339974|gb|EAT58477.1| D-3-phosphoglycerate dehydrogenase [Chlorobium ferrooxidans DSM
13031]
Length = 526
Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 46/95 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF D + R + I + + +I N D G++ V +L ++ +N+A+ L R +
Sbjct: 430 VFGDKEIRIVMIDQFLVEFKPEGHIIIYNNIDKPGVIAHVTQLLLQHNLNVAYVALSRDE 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A++ + +DG + +++L+ +S +
Sbjct: 490 EKKVAMTAIVVDGEVSDALLQAVSSVNGVSSANLV 524
>gi|89099089|ref|ZP_01171968.1| phosphoglycerate dehydrogenase [Bacillus sp. NRRL B-14911]
gi|89086219|gb|EAR65341.1| phosphoglycerate dehydrogenase [Bacillus sp. NRRL B-14911]
Length = 524
Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 41/91 (45%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
PR + + N D ++ I + D G++ VG +LG++ INIA +GR ++ AI
Sbjct: 434 PRIVFLNGFNIDFLPEGELLYIQHMDRPGVIGRVGKVLGDHSINIAAMQVGRKEAGGEAI 493
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L D + S + L I ++
Sbjct: 494 MVLSFDKPLGESSFKLLEGQEDIVSIRNISL 524
>gi|282899725|ref|ZP_06307688.1| D-3-phosphoglycerate dehydrogenase [Cylindrospermopsis raciborskii
CS-505]
gi|281195340|gb|EFA70274.1| D-3-phosphoglycerate dehydrogenase [Cylindrospermopsis raciborskii
CS-505]
Length = 526
Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 44/92 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + + + +V + M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 430 LLGEKEIHLTDVDGFPINVPPSKYMLFTLHRDMPGIIGKLGSLLGSFNVNIASMQVGRKI 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID + + +LE++ IR
Sbjct: 490 VRGDAVMALSIDDPLPDGILEEIKQVSGIRDA 521
>gi|319401036|gb|EFV89255.1| phosphoglycerate dehydrogenase [Staphylococcus epidermidis FRI909]
Length = 531
Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + + D + + + D GIV GN+LG +GINIA LGR+
Sbjct: 433 VFAGFGPRIVRINDYSLDFKPNQYQLVTCHKDKPGIVGQTGNLLGSHGINIASMTLGRND 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ L ID V++ L+ +
Sbjct: 493 AGGDALMILSIDQQASEEVIKILNETSGFNKI 524
>gi|148926576|ref|ZP_01810258.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni CG8486]
gi|145845270|gb|EDK22364.1| D-3-phosphoglycerate dehydrogenase [Campylobacter jejuni subsp.
jejuni CG8486]
Length = 529
Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ + R + + D MI N DI G++ + ++L INIA F LGR
Sbjct: 434 VFNENEQRIVGLNGFKTDFKPKGKMIIFKNKDIPGVIAKISSVLATKNINIADFRLGRDG 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A++ + ID + VL++L FV+ E
Sbjct: 494 FG-YALAVVLIDEKVQKEVLDELKQLEVCVFVQYVEI 529
>gi|256396892|ref|YP_003118456.1| D-3-phosphoglycerate dehydrogenase [Catenulispora acidiphila DSM
44928]
gi|256363118|gb|ACU76615.1| D-3-phosphoglycerate dehydrogenase [Catenulispora acidiphila DSM
44928]
Length = 535
Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 39/91 (42%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ +++ DV I ++ + D G+V +G +LG GINI + R+ A+
Sbjct: 444 KIVEVDGFQLDVTIAEHLLFLRYTDRPGVVGQLGGVLGAAGINIGGMQVARAAKGGEALV 503
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
L +D + +LE++ + V
Sbjct: 504 ALTVDSVVPAGLLEEIKAAIGATAVHSISLE 534
>gi|222151058|ref|YP_002560212.1| L-serine dehydratase beta subunit [Macrococcus caseolyticus
JCSC5402]
gi|222120181|dbj|BAH17516.1| L-serine dehydratase beta subunit [Macrococcus caseolyticus
JCSC5402]
Length = 221
Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 38/94 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK + + + + + + D G + V +IL E+ IN+ + R +
Sbjct: 126 GGGKIEIVALNGFPIAISGNYPALLVFHKDTFGTIAKVTSILSEHKINVGQMQVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A+ +D I + VLE++ I+ V
Sbjct: 186 DLALMTCELDDEITDDVLEQIRRCEGIQTVTLMT 219
>gi|312880178|ref|ZP_07739978.1| D-3-phosphoglycerate dehydrogenase [Aminomonas paucivorans DSM
12260]
gi|310783469|gb|EFQ23867.1| D-3-phosphoglycerate dehydrogenase [Aminomonas paucivorans DSM
12260]
Length = 549
Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 48/92 (52%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V +G+ R +++ + D+ ++ N D G++ VG +LG+ G+NIA+F LGR
Sbjct: 449 VTEEGRQRVVRLDDYWLDLIPSGRLLLFQNHDRPGVIGKVGTLLGQAGVNIANFALGRKN 508
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A++ L ID + +L L + + +
Sbjct: 509 GSGLALAALQIDQELGEELLSTLRHDGDLIWA 540
>gi|284992450|ref|YP_003411004.1| D-3-phosphoglycerate dehydrogenase [Geodermatophilus obscurus DSM
43160]
gi|284065695|gb|ADB76633.1| D-3-phosphoglycerate dehydrogenase [Geodermatophilus obscurus DSM
43160]
Length = 533
Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 1 VFSDGK-PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRS 59
+F + P+ +++ + D+D ++ V D G+V VG LGE GINIA + R+
Sbjct: 433 LFGKNQVPKLVEVNGFDMDLDAAGYLLFFVYTDRPGVVGTVGAALGEAGINIAGAQVSRT 492
Query: 60 QSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVK 93
A+ + +D + +L ++ + R +
Sbjct: 493 TRGGEALMAVTVDSPVPAELLGDIAGRIGAREAR 526
>gi|282895559|ref|ZP_06303693.1| D-3-phosphoglycerate dehydrogenase [Raphidiopsis brookii D9]
gi|281199399|gb|EFA74263.1| D-3-phosphoglycerate dehydrogenase [Raphidiopsis brookii D9]
Length = 526
Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 44/92 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + + + +V + M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 430 LLGEKEIHLTDVDGFPINVPPSKYMLFTLHRDMPGIIGKLGSLLGSFNVNIASMQVGRKI 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID + + +LE++ IR
Sbjct: 490 VRGDAVMALSIDDPLPDGILEEIKQVSGIRDA 521
>gi|225849892|ref|YP_002730126.1| D-3-phosphoglycerate dehydrogenase [Persephonella marina EX-H1]
gi|225646129|gb|ACO04315.1| phosphoglycerate dehydrogenase [Persephonella marina EX-H1]
Length = 529
Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 47/94 (50%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F P+ + I D+D +++ N D+ G++ +G IL + INIA F LGR +
Sbjct: 434 FYGKFPKIMLIDRYWIDIDPEGVILVFENKDVPGVIAKLGEILARHNINIAGFRLGRLEK 493
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ L +D I ++LE++ I K+
Sbjct: 494 GKIALGALQLDERINEAILEEIQNIPEIIKAKEI 527
>gi|158522862|ref|YP_001530732.1| D-3-phosphoglycerate dehydrogenase [Desulfococcus oleovorans Hxd3]
gi|158511688|gb|ABW68655.1| D-3-phosphoglycerate dehydrogenase [Desulfococcus oleovorans Hxd3]
Length = 527
Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F PR ++I + DV M+ I++ + G++ +G GE G+NI F +G
Sbjct: 430 LFGKIYPRIVEINDFRVDVSPEGHMLIILSENKPGVIGRIGTTFGEGGVNIVRFMVGNEA 489
Query: 61 -STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ + + D + +LE L I F
Sbjct: 490 IEGQKNMVIIKTDEPVPADILETLKSKKVIFEATSVNF 527
>gi|307265064|ref|ZP_07546624.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306919862|gb|EFN50076.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 533
Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 45/93 (48%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R ++ + + M+ + N D+ G++ +GN LG++GINI+ + +++
Sbjct: 438 GEEIRIVEYMGHKVNFEPTEHMLFVKNKDVPGVIGHIGNALGDFGINISTMQVSPNKNDG 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D I + +E L+ +I + +
Sbjct: 498 TALMIVSTDKEIPDEAVESLNKLNSIIKARAVK 530
>gi|118474999|ref|YP_892404.1| D-3-phosphoglycerate dehydrogenase [Campylobacter fetus subsp.
fetus 82-40]
gi|118414225|gb|ABK82645.1| D-3-phosphoglycerate dehydrogenase [Campylobacter fetus subsp.
fetus 82-40]
Length = 525
Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + R + + D MI N D+ G++ + +IL E INIA F LGR
Sbjct: 430 VFGETEQRIVNVNGFKTDFKPKGRMIVFKNTDVPGVISSISSILAEEKINIADFRLGRDD 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
+ A++ + +D I +L KL+ T + +
Sbjct: 490 N-GFALAVILVDDDIKKDILAKLNALETCVWAEY 522
>gi|295836361|ref|ZP_06823294.1| phosphoglycerate dehydrogenase [Streptomyces sp. SPB74]
gi|295825983|gb|EFG64595.1| phosphoglycerate dehydrogenase [Streptomyces sp. SPB74]
Length = 531
Score = 98.2 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I E D+ + M+ + AD G+V VG +LGE GINIA + R++ A++
Sbjct: 441 KIVAIGEHTVDLALADHMVVLRYADRPGVVGTVGRVLGEAGINIAGMQVSRAEEGGEALA 500
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D S+ VL +++ +
Sbjct: 501 VLTVDDSVPADVLAEVAQETGATSARAVNL 530
>gi|166032443|ref|ZP_02235272.1| hypothetical protein DORFOR_02158 [Dorea formicigenerans ATCC
27755]
gi|166028166|gb|EDR46923.1| hypothetical protein DORFOR_02158 [Dorea formicigenerans ATCC
27755]
Length = 224
Score = 98.2 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 33/96 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ R + I D + + N D G + V L IN+A + R +
Sbjct: 125 GGGRIRVSILDGIEVDFSGESNTLIVRNIDRPGCITEVTAALSHEKINVATMQVFRHKRG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A+ + D SI +V +L I V
Sbjct: 185 GSAVMVVETDQSIPENVAVELKKKEDILEVILLNLE 220
>gi|206901901|ref|YP_002251552.1| D-3-phosphoglycerate dehydrogenase [Dictyoglomus thermophilum
H-6-12]
gi|206741004|gb|ACI20062.1| D-3-phosphoglycerate dehydrogenase [Dictyoglomus thermophilum
H-6-12]
Length = 525
Score = 98.2 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 48/90 (53%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S G+ R + IQ+ D+ + + ++ + D GI+ VG +LG+ INIA +GR +
Sbjct: 431 SRGQERVLAIQDYYLDLALSQYLLIAFHIDRPGIIGKVGTVLGKNNINIAAMQVGRKEIG 490
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ L ID + VL++L I+ V
Sbjct: 491 KDAVMVLVIDNPVDEKVLKELREIENIKEV 520
>gi|153814124|ref|ZP_01966792.1| hypothetical protein RUMTOR_00333 [Ruminococcus torques ATCC 27756]
gi|317499930|ref|ZP_07958166.1| hypothetical protein HMPREF1026_00108 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087847|ref|ZP_08336772.1| L-serine dehydratase [Lachnospiraceae bacterium 3_1_46FAA]
gi|145848520|gb|EDK25438.1| hypothetical protein RUMTOR_00333 [Ruminococcus torques ATCC 27756]
gi|316898647|gb|EFV20682.1| hypothetical protein HMPREF1026_00108 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330409542|gb|EGG88983.1| L-serine dehydratase [Lachnospiraceae bacterium 3_1_46FAA]
Length = 228
Score = 98.2 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R +I E+ D + ++ D G++ + N L E +NIA+ L R +
Sbjct: 128 GGGKIRIARINEVEVDFTGEYSTLIVIQQDKPGVIAHITNCLSEMNVNIAYMKLYREEKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A S + DG + +V ++ N + V
Sbjct: 188 CTAYSIVESDGIVPQTVAGRIKENPYVHDVMLV 220
>gi|242309369|ref|ZP_04808524.1| d-3-phosphoglycerate dehydrogenase [Helicobacter pullorum MIT
98-5489]
gi|239523940|gb|EEQ63806.1| d-3-phosphoglycerate dehydrogenase [Helicobacter pullorum MIT
98-5489]
Length = 117
Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF++ P+ ++I D++ MI N D G++ VG L +Y INIA F LGR
Sbjct: 23 VFNEDTPKIVEINHFEMDIEPKGRMILFRNNDTPGVIGHVGTTLAKYNINIADFRLGRY- 81
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A++ + +D + N V+++LS +K
Sbjct: 82 -GKEALAVILVDDEVSNEVIKELSSIKACLAIKYV 115
>gi|11498419|ref|NP_069647.1| D-3-phosphoglycerate dehydrogenase [Archaeoglobus fulgidus DSM
4304]
gi|3122861|sp|O29445|SERA_ARCFU RecName: Full=D-3-phosphoglycerate dehydrogenase; Short=PGDH
gi|2649798|gb|AAB90429.1| phosphoglycerate dehydrogenase (serA) [Archaeoglobus fulgidus DSM
4304]
Length = 527
Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR--SQS 61
+ R +KI N + I ++ D G++ VG + G INIA +GR +
Sbjct: 432 GNEYRILKIDVYNVNFVPKGHYIISLHEDKPGVIGRVGTLFGRNNINIAGMIVGRSGDKP 491
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ L +D VLE+++ I E
Sbjct: 492 GGIQLMLLLVDDPPTPEVLEEMTKLDGIIDATYVEL 527
>gi|253580324|ref|ZP_04857590.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Ruminococcus sp. 5_1_39B_FAA]
gi|251848417|gb|EES76381.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Ruminococcus sp. 5_1_39BFAA]
Length = 222
Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 41/95 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R +KI + D + +++ D G+V ++ L + INIA L R
Sbjct: 128 GGGKVRIVKINHVQVDFTGEYSAVIVIHQDTPGVVAYITKCLSDRNINIAFMRLFREGKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A + + DG + +++ + N I V +
Sbjct: 188 DIAYTIVESDGKLPENIVPAIRENPNIHEVMIVQM 222
>gi|307352504|ref|YP_003893555.1| D-3-phosphoglycerate dehydrogenase [Methanoplanus petrolearius DSM
11571]
gi|307155737|gb|ADN35117.1| D-3-phosphoglycerate dehydrogenase [Methanoplanus petrolearius DSM
11571]
Length = 528
Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 45/92 (48%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
K R +KI E D+ G ++ + D+ G++ I+G+YG+NIA +GR+Q E A
Sbjct: 437 KLRIVKIGEYMTDMTPGGDVVISRHHDVPGVIGHFATIIGKYGVNIAGMQVGRNQPGEEA 496
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ L +D + ++K+ + K
Sbjct: 497 VMVLNVDSEVPQEAMDKILKIEGVYTAKYAHI 528
>gi|21227855|ref|NP_633777.1| D-3-phosphoglycerate dehydrogenase [Methanosarcina mazei Go1]
gi|20906268|gb|AAM31449.1| D-3-phosphoglycerate dehydrogenase [Methanosarcina mazei Go1]
Length = 540
Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 41/94 (43%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+P+ + I + D+ MI + + ++ +LG+ INI+ +GRS+
Sbjct: 447 GDEPKIVSIDDDKVDIFPAGRMIFAKHINKPNVIGPCCMVLGKNNINISGMQVGRSEVGG 506
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ L +D + +++L+++ I K
Sbjct: 507 VTMMVLNVDTDVSDAILDEVRQVPGILNAKLVTL 540
>gi|282861276|ref|ZP_06270341.1| D-3-phosphoglycerate dehydrogenase [Streptomyces sp. ACTE]
gi|282563934|gb|EFB69471.1| D-3-phosphoglycerate dehydrogenase [Streptomyces sp. ACTE]
Length = 530
Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I E + D+ + M+ + D G+V VG ILGE G+NIA + R + A+
Sbjct: 439 KIVAIGEHDVDLALADHMVVLRYEDRPGVVGAVGKILGEAGLNIAGMQVSRQDAGGEALV 498
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D +I SVL +++ + +
Sbjct: 499 VLTVDDTIPQSVLSEIAEEIGATSARSVNL 528
>gi|255658218|ref|ZP_05403627.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Mitsuokella multacida DSM 20544]
gi|260849527|gb|EEX69534.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Mitsuokella multacida DSM 20544]
Length = 220
Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 32/93 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G R I ++ + ++ D GI+ V IL Y NIA + R
Sbjct: 125 GGGNIRITNIDGYEVELTGTYPALITIHHDRPGIITKVTQILARYEYNIAFMRVSRHSRG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E A+ L +D + V+ + +
Sbjct: 185 EMAMMILELDEPLDEDVVAECCEVYEVEHAFAI 217
>gi|226225601|ref|YP_002759707.1| D-3-phosphoglycerate dehydrogenase [Gemmatimonas aurantiaca T-27]
gi|226088792|dbj|BAH37237.1| D-3-phosphoglycerate dehydrogenase [Gemmatimonas aurantiaca T-27]
Length = 534
Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 47/94 (50%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G PR +I + DV+ + ++ + N D+ G++ VG +LGE G+NIA +H R
Sbjct: 438 GGTPRLTRIGSFHVDVNPRQTLLVLTNHDVPGVIGRVGTLLGERGVNIAEYHQARLAQGG 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ + +DG++ + L +R F
Sbjct: 498 DALAAVSVDGTVSEETRKALLELSDVRSASIVHF 531
>gi|307152719|ref|YP_003888103.1| D-3-phosphoglycerate dehydrogenase [Cyanothece sp. PCC 7822]
gi|306982947|gb|ADN14828.1| D-3-phosphoglycerate dehydrogenase [Cyanothece sp. PCC 7822]
Length = 525
Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 45/92 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ +G+ R + E +V M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 429 LLGNGEIRITDLDEFPINVPPSNYMLFTLHRDMPGIIGKIGSLLGSFNVNIASMQVGRKI 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D + +L +++ IR
Sbjct: 489 VRGDAVMALSLDDPLPEGILSEITKVAGIRDA 520
>gi|312142859|ref|YP_003994305.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Halanaerobium sp. 'sapolanicus']
gi|311903510|gb|ADQ13951.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Halanaerobium sp. 'sapolanicus']
Length = 220
Score = 97.8 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 39/93 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I + + I + D G + + ++LG++ INIA + R++
Sbjct: 125 GGGSIEVREINGSAVKLTGRLPTLWIRHKDRPGEIALITSVLGKHQINIAFMQVYRNRRG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ S L +D +VL++L I ++
Sbjct: 185 DIGSSILELDQKPPQAVLDELEKCKDIYQLRYL 217
>gi|255322493|ref|ZP_05363638.1| phosphoglycerate dehydrogenase [Campylobacter showae RM3277]
gi|255300401|gb|EET79673.1| phosphoglycerate dehydrogenase [Campylobacter showae RM3277]
Length = 525
Score = 97.8 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + R + I D MI N D+ G++ + +IL E INIA F LGR
Sbjct: 430 VFGENQQRIVTINGFKTDFKPKGKMIIFKNNDVPGVIAKISSILAEEKINIADFRLGRDD 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
A++ + +D I L KL+ + K
Sbjct: 490 H-GMALAVVLVDEKITKETLAKLNDLDVCVWAKY 522
>gi|218441675|ref|YP_002380004.1| D-3-phosphoglycerate dehydrogenase [Cyanothece sp. PCC 7424]
gi|218174403|gb|ACK73136.1| D-3-phosphoglycerate dehydrogenase [Cyanothece sp. PCC 7424]
Length = 527
Score = 97.8 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 49/99 (49%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ S+G+ R + E +V M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 429 LLSNGEIRITDLDEFPINVPPSNYMLFTLHRDMPGIIGKIGSLLGSFNVNIASMQVGRKI 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
A+ L +D + +L +++ IR + ++
Sbjct: 489 VRGDAVMALSLDDPLPEGILSEITKVAGIRDAYTVKLSI 527
>gi|320170533|gb|EFW47432.1| D-3-phosphoglycerate dehydrogenase [Capsaspora owczarzaki ATCC
30864]
Length = 552
Score = 97.8 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 42/97 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF RF +I + F+V ++ N D G++ +G L + INIA LGR
Sbjct: 456 VFGTNNLRFTRIDQFAFEVRPAGHLMFYRNEDKPGVIAAIGTHLAQASINIADLTLGRDD 515
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
S A+ + D I VL+++ I + +
Sbjct: 516 SKREALCIVNTDQPIPADVLQRIQQTSFITYARTVTL 552
>gi|314951399|ref|ZP_07854451.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium TX0133A]
gi|314991328|ref|ZP_07856807.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium TX0133B]
gi|313594101|gb|EFR72946.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium TX0133B]
gi|313596457|gb|EFR75302.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium TX0133A]
Length = 225
Score = 97.4 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 40/93 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G + +V+ D+ G++ V +IL E NI + R
Sbjct: 132 GGGNIQISELNGFKISLSMGTPTLIVVHQDVPGMIAKVTSILSETNTNIGTMTVTRESKG 191
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E+AI + +D + +++L I V F
Sbjct: 192 ENAIMIIEVDDPQVEETVKRLKQLPNIDSVNYF 224
>gi|317050372|ref|YP_004111488.1| D-3-phosphoglycerate dehydrogenase [Desulfurispirillum indicum S5]
gi|316945456|gb|ADU64932.1| D-3-phosphoglycerate dehydrogenase [Desulfurispirillum indicum S5]
Length = 520
Score = 97.4 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ +D PR +++ E + M+ N D G++ +G +LGE IN+A+ LG
Sbjct: 424 LLADKFPRIVEVNEYKIEAVPQGTMLFFRNYDRPGVIGSLGRLLGEKNINVANMRLGFRG 483
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ AI+ + ID ++ + L++++ I Q EF
Sbjct: 484 D-DEAIAMVNIDTAVDAATLQEITRLDNIIDCFQLEF 519
>gi|261209270|ref|ZP_05923662.1| L-serine dehydratase [Enterococcus faecium TC 6]
gi|289566019|ref|ZP_06446457.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium D344SRF]
gi|294616177|ref|ZP_06695974.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium E1636]
gi|260076816|gb|EEW64551.1| L-serine dehydratase [Enterococcus faecium TC 6]
gi|289162217|gb|EFD10079.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium D344SRF]
gi|291590932|gb|EFF22644.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium E1636]
Length = 222
Score = 97.4 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 40/93 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G + +V+ D+ G++ V +IL E NI + R
Sbjct: 129 GGGNIQISELNGFKISLSMGTPTLIVVHQDVPGMIAKVTSILSETNTNIGTMTVTRESKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E+AI + +D + +++L I V F
Sbjct: 189 ENAIMIIEVDDPQVEETVKRLKQLPNIDSVNYF 221
>gi|288919125|ref|ZP_06413464.1| D-3-phosphoglycerate dehydrogenase [Frankia sp. EUN1f]
gi|288349469|gb|EFC83707.1| D-3-phosphoglycerate dehydrogenase [Frankia sp. EUN1f]
Length = 529
Score = 97.4 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 40/93 (43%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ I D+ + D GIV VG +LGE INIA+ + R + A+
Sbjct: 437 KITAIDGFEVDLRPENHLAFFRYEDRPGIVGAVGALLGEAHINIANAQVSRLSAGGEALM 496
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
L +D ++ +L +++ + + + + D
Sbjct: 497 SLSLDDAVAPDILTEIAKIIGASYARAVSISTD 529
>gi|323440732|gb|EGA98441.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus O11]
Length = 534
Score = 97.4 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + D+ + I + D G+V G +LG+Y INIA LGR++
Sbjct: 434 VFTGFGPRIVRINNFSVDLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTE 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ A+ L +D + N+++++L
Sbjct: 494 AGGDALMILSVDQPVSNNIIDELKQV 519
>gi|188996207|ref|YP_001930458.1| D-3-phosphoglycerate dehydrogenase [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931274|gb|ACD65904.1| D-3-phosphoglycerate dehydrogenase [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 529
Score = 97.4 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 47/92 (51%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
D PR + + D++ +++ N D+ G++ +G +L ++ +NIA F LGR + +
Sbjct: 436 DKFPRIMMVDNYWIDIEPQGVILMFENKDVPGVIGKLGTLLAKHNVNIAGFRLGRLEKGK 495
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ L +D + VLE++ I KQ
Sbjct: 496 IALGALQLDDRLNEEVLEEIHQIPEIIKAKQV 527
>gi|283470989|emb|CAQ50200.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
ST398]
Length = 534
Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + D+ + I + D G+V G +LG+Y INIA LGR++
Sbjct: 434 VFTGFGPRIVRINNFSVDLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTE 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ A+ L +D + N+++++L
Sbjct: 494 AGGDALMILSVDQPVSNNIIDELKQV 519
>gi|291519798|emb|CBK75019.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Butyrivibrio fibrisolvens 16/4]
Length = 219
Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 35/92 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ ++ ++ + + N D G + V +LG GINIA L R
Sbjct: 124 GGGRIEVCQLDGVDVSFSGESPTLIVHNVDQPGYITEVTRLLGTQGINIATMQLHRKNRG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
A+ + D + + ++LS I V
Sbjct: 184 GEAVMVIECDDEVPVATRQELSTLEGILNVSY 215
>gi|320008407|gb|ADW03257.1| D-3-phosphoglycerate dehydrogenase [Streptomyces flavogriseus ATCC
33331]
Length = 530
Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I E + D+ + M+ + D G+V VG ILGE G+NIA + R + A+
Sbjct: 439 KIVAIGEHDVDLALADHMVVLRYEDRPGVVGAVGKILGEAGLNIAGMQVSRQDAGGEALV 498
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D +I SVL +++ + +
Sbjct: 499 VLTVDDTIPQSVLTEIAEEIGAASARSVNL 528
>gi|257880341|ref|ZP_05659994.1| L-serine dehydratase [Enterococcus faecium 1,230,933]
gi|257882195|ref|ZP_05661848.1| L-serine dehydratase [Enterococcus faecium 1,231,502]
gi|257891000|ref|ZP_05670653.1| L-serine dehydratase [Enterococcus faecium 1,231,410]
gi|257894254|ref|ZP_05673907.1| L-serine dehydratase [Enterococcus faecium 1,231,408]
gi|258614708|ref|ZP_05712478.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium DO]
gi|260562355|ref|ZP_05832869.1| L-serine dehydratase [Enterococcus faecium C68]
gi|293559852|ref|ZP_06676366.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium E1162]
gi|293568372|ref|ZP_06679693.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium E1071]
gi|294618919|ref|ZP_06698426.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium E1679]
gi|294623145|ref|ZP_06702031.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium U0317]
gi|314937973|ref|ZP_07845284.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium TX0133a04]
gi|314944023|ref|ZP_07850708.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium TX0133C]
gi|314948413|ref|ZP_07851801.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium TX0082]
gi|314995334|ref|ZP_07860440.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium TX0133a01]
gi|257814569|gb|EEV43327.1| L-serine dehydratase [Enterococcus faecium 1,230,933]
gi|257817853|gb|EEV45181.1| L-serine dehydratase [Enterococcus faecium 1,231,502]
gi|257827360|gb|EEV53986.1| L-serine dehydratase [Enterococcus faecium 1,231,410]
gi|257830633|gb|EEV57240.1| L-serine dehydratase [Enterococcus faecium 1,231,408]
gi|260073279|gb|EEW61620.1| L-serine dehydratase [Enterococcus faecium C68]
gi|291588893|gb|EFF20720.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium E1071]
gi|291594835|gb|EFF26205.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium E1679]
gi|291597514|gb|EFF28679.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium U0317]
gi|291606188|gb|EFF35608.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium E1162]
gi|313590427|gb|EFR69272.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium TX0133a01]
gi|313597368|gb|EFR76213.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium TX0133C]
gi|313642648|gb|EFS07228.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium TX0133a04]
gi|313645138|gb|EFS09718.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium TX0082]
Length = 222
Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 40/93 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G + +V+ D+ G++ V +IL E NI + R
Sbjct: 129 GGGNIQISELNGFKISLSMGTPTLIVVHQDVPGMIAKVTSILSETNTNIGTMTVTRESKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E+AI + +D + +++L I V F
Sbjct: 189 ENAIMIIEVDDPQVEETVKRLKQLPNIDSVNYF 221
>gi|282911349|ref|ZP_06319151.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282325044|gb|EFB55354.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|312437820|gb|ADQ76891.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
TCH60]
Length = 534
Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + D+ + I + D G+V G +LG+Y INIA LGR++
Sbjct: 434 VFTGFGPRIVRINNFSVDLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTE 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ A+ L +D + N+++++L
Sbjct: 494 AGGDALMILSVDQPVSNNIIDELKQV 519
>gi|219851104|ref|YP_002465536.1| D-3-phosphoglycerate dehydrogenase [Methanosphaerula palustris
E1-9c]
gi|219545363|gb|ACL15813.1| D-3-phosphoglycerate dehydrogenase [Methanosphaerula palustris
E1-9c]
Length = 532
Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 43/97 (44%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFS + R + I D+D ++ + D G++ ILG +NIA +GR +
Sbjct: 436 VFSKVRSRIVAIGGYTMDLDPTGFLVISRHLDKPGVIGRASTILGHCEVNIAGMQVGRIR 495
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
E AI L +D + + ++++ I K +
Sbjct: 496 PGEEAIMVLNVDSEVSDEAMDEIRSMPGIFSAKFAQI 532
>gi|257431137|ref|ZP_05607514.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257278085|gb|EEV08733.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus 68-397]
Length = 534
Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + D+ + I + D G+V G +LG+Y INIA LGR++
Sbjct: 434 VFTGFGPRIVRINNFSVDLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTE 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ A+ L +D + N+++++L
Sbjct: 494 AGGDALMILSVDQPVSNNIIDELKQV 519
>gi|310642598|ref|YP_003947356.1| d-3-phosphoglycerate dehydrogenase [Paenibacillus polymyxa SC2]
gi|309247548|gb|ADO57115.1| D-3-phosphoglycerate dehydrogenase [Paenibacillus polymyxa SC2]
Length = 530
Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + R +++ + DV + I + D GI+ VG +LGE +NIA +GR
Sbjct: 433 LLAGYGERIVRLNQFPVDVAPEAHFLLISHNDKPGIIGRVGTLLGENSVNIASMQVGRKI 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
AI L +D ++ VL +L + ++ +
Sbjct: 493 VGGEAIMILTVDKAVPKDVLIQLVGLPELNTAQEVVLD 530
>gi|82751311|ref|YP_417052.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus RF122]
gi|82656842|emb|CAI81271.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus RF122]
Length = 534
Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + D+ + I + D G+V G +LG+Y INIA LGR++
Sbjct: 434 VFTGFGPRIVRINNFSVDLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTE 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ A+ L +D + N+++++L
Sbjct: 494 AGGDALMILSVDQPVSNNIIDELKQV 519
>gi|225165807|ref|ZP_03727591.1| D-3-phosphoglycerate dehydrogenase [Opitutaceae bacterium TAV2]
gi|224799953|gb|EEG18398.1| D-3-phosphoglycerate dehydrogenase [Opitutaceae bacterium TAV2]
Length = 529
Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 41/94 (43%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ +PR + I +V ++ + N D G+V VG +LG G+NIA L R
Sbjct: 436 NNEPRVVGINGREVEVAAEGQLLVLENTDKPGMVGMVGTLLGNDGVNIADMSLTRLILGG 495
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A + +D + + L N ++F K +
Sbjct: 496 TAYMVVRVDHEPSPTARKALKDNPAVKFAKFVQL 529
>gi|300087849|ref|YP_003758371.1| D-3-phosphoglycerate dehydrogenase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527582|gb|ADJ26050.1| D-3-phosphoglycerate dehydrogenase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 526
Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 43/96 (44%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + ++I + D+ G + + D G++ VG I G+ +N+++ HL R +
Sbjct: 431 FLRDQVHIVRINDYWIDITPGGFFLFADHRDRPGLIGAVGGITGKADVNVSYMHLSRLKP 490
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D S+ ++ L ++ + K
Sbjct: 491 RGQALMVLALDESLSDADLAEIRSLDGVNSAKMVSL 526
>gi|17229382|ref|NP_485930.1| D-3-phosphoglycerate dehydrogenase [Nostoc sp. PCC 7120]
gi|17130980|dbj|BAB73589.1| phosphoglycerate dehydrogenase [Nostoc sp. PCC 7120]
Length = 526
Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 44/92 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ D + + +V + M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 430 LLGDKEIHLTDVDGFPINVPPSKYMVFTLHRDMPGIIGKLGSLLGSFNVNIASMQVGRKI 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID + + +L +++ IR
Sbjct: 490 VRGDAVMALSIDDPLPDGILAEITKVPGIRDA 521
>gi|298694992|gb|ADI98214.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus ED133]
Length = 534
Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + D+ + I + D G+V G +LG+Y INIA LGR++
Sbjct: 434 VFTGFGPRIVRINNFSVDLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTE 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ A+ L +D + N+++++L
Sbjct: 494 AGGDALMILSVDQPVSNNIIDELKQV 519
>gi|257885388|ref|ZP_05665041.1| L-serine dehydratase [Enterococcus faecium 1,231,501]
gi|257821244|gb|EEV48374.1| L-serine dehydratase [Enterococcus faecium 1,231,501]
Length = 222
Score = 97.4 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 39/93 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G + +V+ D+ G++ V +IL E NI + R
Sbjct: 129 GGGNIQISELNGFKISLSMGTPTLIVVHQDVPGMIAKVTSILSETNTNIGTMTVTRESKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E AI + +D + +++L I V F
Sbjct: 189 ESAIMIIEVDNPQVEETVKRLKQLPNIDSVNYF 221
>gi|15615060|ref|NP_243363.1| L-serine dehydratase beta subunit [Bacillus halodurans C-125]
gi|10175117|dbj|BAB06216.1| L-serine dehydratase beta subunit [Bacillus halodurans C-125]
Length = 220
Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 45/94 (47%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + I +V+ D G++ V N+L ++ INI H + R +
Sbjct: 126 GGGKIEIVELNGFHLKLSGNHPAILVVHTDRFGVIASVSNMLAKHEINIGHMEVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A+ + +D ++ + +L++L I V +
Sbjct: 186 KEALMVIEVDQNVDDLLLQELERLPNIVTVTKIH 219
>gi|152992147|ref|YP_001357868.1| D-3-phosphoglycerate dehydrogenase [Sulfurovum sp. NBC37-1]
gi|151424008|dbj|BAF71511.1| D-3-phosphoglycerate dehydrogenase [Sulfurovum sp. NBC37-1]
Length = 529
Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF D R I+I + DV+ MI N D G++ VG IL E G+NI+ F LGR +
Sbjct: 434 VFDDTVQRIIEIDDYILDVEPKGTMIFFRNTDTPGVIGDVGRILAENGLNISDFRLGRDK 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A++ + +DG + VL+ LS V
Sbjct: 494 K-QQALAVVRVDGQVSKEVLDALSALKACISV 524
>gi|49483964|ref|YP_041188.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|253734492|ref|ZP_04868657.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus TCH130]
gi|257425837|ref|ZP_05602261.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428503|ref|ZP_05604901.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257436736|ref|ZP_05612780.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
M876]
gi|282904293|ref|ZP_06312181.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
C160]
gi|282906118|ref|ZP_06313973.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282909033|ref|ZP_06316851.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282914518|ref|ZP_06322304.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
M899]
gi|282919486|ref|ZP_06327221.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
C427]
gi|282924864|ref|ZP_06332530.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
C101]
gi|283958473|ref|ZP_06375924.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503596|ref|ZP_06667443.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
58-424]
gi|293510612|ref|ZP_06669317.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
M809]
gi|293537153|ref|ZP_06671833.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
M1015]
gi|295428293|ref|ZP_06820922.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297590744|ref|ZP_06949382.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
MN8]
gi|49242093|emb|CAG40792.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|253727546|gb|EES96275.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus TCH130]
gi|257271531|gb|EEV03677.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275344|gb|EEV06831.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257284087|gb|EEV14210.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
M876]
gi|282313230|gb|EFB43626.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
C101]
gi|282317296|gb|EFB47670.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
C427]
gi|282321699|gb|EFB52024.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
M899]
gi|282327297|gb|EFB57592.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331410|gb|EFB60924.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595911|gb|EFC00875.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
C160]
gi|283790622|gb|EFC29439.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919998|gb|EFD97066.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
M1015]
gi|291095262|gb|EFE25527.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
58-424]
gi|291466503|gb|EFF09024.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
M809]
gi|295127693|gb|EFG57330.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297575630|gb|EFH94346.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
MN8]
gi|302333388|gb|ADL23581.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus JKD6159]
gi|315195627|gb|EFU26014.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus CGS00]
gi|323442972|gb|EGB00594.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus O46]
gi|329733088|gb|EGG69425.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
21193]
Length = 534
Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + D+ + I + D G+V G +LG+Y INIA LGR++
Sbjct: 434 VFTGFGPRIVRINNFSVDLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTE 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ A+ L +D + N+++++L
Sbjct: 494 AGGDALMILSVDQPVSNNIIDELKQV 519
>gi|21283395|ref|NP_646483.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus MW2]
gi|49486548|ref|YP_043769.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|297207564|ref|ZP_06923999.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300911645|ref|ZP_07129089.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
TCH70]
gi|21204835|dbj|BAB95531.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus MW2]
gi|49244991|emb|CAG43452.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|296887581|gb|EFH26479.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300887066|gb|EFK82267.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
TCH70]
Length = 534
Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + D+ + I + D G+V G +LG+Y INIA LGR++
Sbjct: 434 VFTGFGPRIVRINNFSVDLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTE 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ A+ L +D + N+++++L
Sbjct: 494 AGGDALMILSVDQPVSNNIIDELKQV 519
>gi|15924714|ref|NP_372248.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus Mu50]
gi|15927301|ref|NP_374834.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus N315]
gi|148268202|ref|YP_001247145.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus JH9]
gi|150394270|ref|YP_001316945.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus JH1]
gi|156980041|ref|YP_001442300.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus Mu3]
gi|253315102|ref|ZP_04838315.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253732373|ref|ZP_04866538.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|255006509|ref|ZP_05145110.2| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257794107|ref|ZP_05643086.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A9781]
gi|258415811|ref|ZP_05682082.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus A9763]
gi|258420640|ref|ZP_05683579.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A9719]
gi|258438290|ref|ZP_05689574.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus A9299]
gi|258443748|ref|ZP_05692087.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus A8115]
gi|258445959|ref|ZP_05694135.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus A6300]
gi|258448361|ref|ZP_05696478.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus A6224]
gi|258454159|ref|ZP_05702130.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A5937]
gi|269203362|ref|YP_003282631.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus ED98]
gi|282893218|ref|ZP_06301452.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A8117]
gi|282927853|ref|ZP_06335464.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A10102]
gi|295406034|ref|ZP_06815842.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A8819]
gi|296276628|ref|ZP_06859135.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus MR1]
gi|297245040|ref|ZP_06928917.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A8796]
gi|13701519|dbj|BAB42813.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus N315]
gi|14247496|dbj|BAB57886.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus Mu50]
gi|147741271|gb|ABQ49569.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus JH9]
gi|149946722|gb|ABR52658.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus JH1]
gi|156722176|dbj|BAF78593.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus Mu3]
gi|253723895|gb|EES92624.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|257788079|gb|EEV26419.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A9781]
gi|257839404|gb|EEV63877.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus A9763]
gi|257843244|gb|EEV67654.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A9719]
gi|257848334|gb|EEV72325.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus A9299]
gi|257851154|gb|EEV75097.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus A8115]
gi|257855201|gb|EEV78140.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus A6300]
gi|257858329|gb|EEV81214.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus A6224]
gi|257863611|gb|EEV86368.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A5937]
gi|262075652|gb|ACY11625.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus ED98]
gi|282590363|gb|EFB95442.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A10102]
gi|282764536|gb|EFC04662.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A8117]
gi|285817406|gb|ADC37893.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus 04-02981]
gi|294969031|gb|EFG45052.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A8819]
gi|297178120|gb|EFH37368.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A8796]
gi|315130640|gb|EFT86626.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus CGS03]
gi|329727559|gb|EGG64015.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
21172]
Length = 534
Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + D+ + I + D G+V G +LG+Y INIA LGR++
Sbjct: 434 VFTGFGPRIVRINNFSVDLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTE 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ A+ L +D + N+++++L
Sbjct: 494 AGGDALMILSVDQPVSNNIIDELKQV 519
>gi|57652022|ref|YP_186607.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus COL]
gi|87160337|ref|YP_494364.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88195533|ref|YP_500339.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221829|ref|YP_001332651.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161509939|ref|YP_001575598.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221142358|ref|ZP_03566851.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|258450882|ref|ZP_05698935.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A5948]
gi|262049037|ref|ZP_06021915.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus D30]
gi|262051787|ref|ZP_06024004.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus 930918-3]
gi|294849885|ref|ZP_06790624.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A9754]
gi|304380684|ref|ZP_07363355.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|57286208|gb|AAW38302.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus COL]
gi|87126311|gb|ABD20825.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87203091|gb|ABD30901.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150374629|dbj|BAF67889.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160368748|gb|ABX29719.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257861418|gb|EEV84226.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A5948]
gi|259160281|gb|EEW45308.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus 930918-3]
gi|259162854|gb|EEW47418.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus D30]
gi|269941202|emb|CBI49590.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus TW20]
gi|294823224|gb|EFG39654.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A9754]
gi|302751550|gb|ADL65727.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340791|gb|EFM06720.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|315197191|gb|EFU27530.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus CGS01]
gi|320141667|gb|EFW33502.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143821|gb|EFW35594.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329314397|gb|AEB88810.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus T0131]
gi|329726965|gb|EGG63422.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
21189]
Length = 534
Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + D+ + I + D G+V G +LG+Y INIA LGR++
Sbjct: 434 VFTGFGPRIVRINNFSVDLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTE 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ A+ L +D + N+++++L
Sbjct: 494 AGGDALMILSVDQPVSNNIIDELKQV 519
>gi|284024770|ref|ZP_06379168.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus 132]
Length = 534
Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + D+ + I + D G+V G +LG+Y INIA LGR++
Sbjct: 434 VFTGFGPRIVRINNFSVDLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTE 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ A+ L +D + N+++++L
Sbjct: 494 AGGDALMILSVDQPVSNNIIDELKQV 519
>gi|282924414|ref|ZP_06332087.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A9765]
gi|282592915|gb|EFB97918.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A9765]
Length = 534
Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + D+ + I + D G+V G +LG+Y INIA LGR++
Sbjct: 434 VFTGFGPRIVRINNFSVDLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTE 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ A+ L +D + N+++++L
Sbjct: 494 AGGDALMILSVDQPVSNNIIDELKQV 519
>gi|282916984|ref|ZP_06324742.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
D139]
gi|283770802|ref|ZP_06343694.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus H19]
gi|282319471|gb|EFB49823.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
D139]
gi|283460949|gb|EFC08039.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus aureus subsp.
aureus H19]
Length = 534
Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + D+ + I + D G+V G +LG+Y INIA LGR++
Sbjct: 434 VFTGFGPRIVRINNFSVDLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTE 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ A+ L +D + N+++++L
Sbjct: 494 AGGDALMILSVDQPVSNNIIDELKQV 519
>gi|301122067|ref|XP_002908760.1| phosphoserine aminotransferase, putative [Phytophthora infestans
T30-4]
gi|262099522|gb|EEY57574.1| phosphoserine aminotransferase, putative [Phytophthora infestans
T30-4]
Length = 3635
Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + RF+ ++ D M+ N D G++ V ++L ++ INI +F L R +
Sbjct: 461 VFGKSQLRFVSFDDLPMDAIPSGSMLLFNNTDQPGVLHKVTSVLAKHQINIGNFGLAREK 520
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNV---TIRFVKQFEFN 98
+T A+S L +D +I + V+++L +R V E N
Sbjct: 521 ATAAAVSVLNVDEAIPDVVMDELEALGMLTDLRRVNLLELN 561
>gi|86742318|ref|YP_482718.1| D-3-phosphoglycerate dehydrogenase [Frankia sp. CcI3]
gi|86569180|gb|ABD12989.1| D-3-phosphoglycerate dehydrogenase [Frankia sp. CcI3]
Length = 529
Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 40/93 (43%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ I D+ + D GIV VG +LGE INIA + R Q+ A+
Sbjct: 437 KITAIDGFEVDIRPEAHLAFFRYEDRPGIVGAVGALLGEAHINIASAQVSRLQAGGEALM 496
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
L +D ++ +L +++ + + + + D
Sbjct: 497 SLSLDDAVAPDILAEIAKIIGASYARAVSISSD 529
>gi|293557110|ref|ZP_06675665.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium E1039]
gi|291600731|gb|EFF31028.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium E1039]
Length = 222
Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 40/93 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G + +V+ D+ G++ V +IL E NI + R
Sbjct: 129 GGGNIQISELNGFKISLSMGTPTLIVVHQDVPGMIAKVTSILSETNTNIGTMTVTRESKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E+AI + +D + +++L I V F
Sbjct: 189 ENAIMIIEVDNPQVEETVKRLKQLPNIDSVNYF 221
>gi|157165087|ref|YP_001466441.1| D-3-phosphoglycerate dehydrogenase [Campylobacter concisus 13826]
gi|112801635|gb|EAT98979.1| phosphoglycerate dehydrogenase [Campylobacter concisus 13826]
Length = 525
Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + R + + D MI N D+ G++ + IL + INIA F LGR +
Sbjct: 430 VFGENQQRIVTVNGFKTDFKPKGKMIIFKNHDVPGVIAQISKILADEKINIADFRLGRDE 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
A++ + +D I LE+L+ + +
Sbjct: 490 H-GMALAVILVDEHIKTETLERLNALEACVWAQY 522
>gi|182435790|ref|YP_001823509.1| D-3-phosphoglycerate dehydrogenase [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326776414|ref|ZP_08235679.1| D-3-phosphoglycerate dehydrogenase [Streptomyces cf. griseus
XylebKG-1]
gi|178464306|dbj|BAG18826.1| putative D-3-phosphoglycerate dehydrogenase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326656747|gb|EGE41593.1| D-3-phosphoglycerate dehydrogenase [Streptomyces cf. griseus
XylebKG-1]
Length = 530
Score = 97.0 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 44/94 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I E + D+ + M+ + D G+V VG ILGE G+NIA + R+
Sbjct: 435 KNLQKIVAIGEHDVDLALADHMVVLRYQDRPGVVGAVGKILGEAGLNIAGMQVSRAAEGG 494
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D ++ SVL ++S + +
Sbjct: 495 EALVVLTVDETVPQSVLTEISEEIGASSARSVNL 528
>gi|257461292|ref|ZP_05626389.1| phosphoglycerate dehydrogenase [Campylobacter gracilis RM3268]
gi|257441320|gb|EEV16466.1| phosphoglycerate dehydrogenase [Campylobacter gracilis RM3268]
Length = 535
Score = 97.0 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + R + I D MI N D+ G++ V IL + INIA F LGR +
Sbjct: 440 VFDGSEERIVNIGGFKTDFKPKGKMIIFKNTDVPGVIKSVSTILADENINIADFRLGRGE 499
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
+ A++ + +D + S L+KL+ T V+
Sbjct: 500 EGD-ALAVILVDSEVQKSTLDKLAALQTCLMVRY 532
>gi|304317984|ref|YP_003853129.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779486|gb|ADL70045.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 533
Score = 97.0 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 47/93 (50%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R ++ + + M+ + N DI G++ +GN+LG++GINIA H+ +++
Sbjct: 438 GDEIRIVEYLGHRVNFEPTEYMLFVRNKDIPGVIGHIGNVLGDFGINIASMHVSPNKNDG 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D I N +E L+ +I K +
Sbjct: 498 TALMIVNTDREIPNEAVESLNKLNSILRAKAVK 530
>gi|20089481|ref|NP_615556.1| D-3-phosphoglycerate dehydrogenase [Methanosarcina acetivorans C2A]
gi|19914387|gb|AAM04036.1| phosphoglycerate dehydrogenase [Methanosarcina acetivorans C2A]
Length = 523
Score = 97.0 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 41/94 (43%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+P+ + I E D+ MI + + ++ +LG+ INI+ +GRS+
Sbjct: 430 GDEPKIVSIDEDRVDIFPAGRMIFAKHINKPNVIGPCCMVLGKNNINISGMQVGRSEVGG 489
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ L +D + +++L+++ I K
Sbjct: 490 VTMMVLNVDTDVSDAILDEVRQVPGILNAKLVTL 523
>gi|294815271|ref|ZP_06773914.1| D-3-phosphoglycerate dehydrogenase [Streptomyces clavuligerus ATCC
27064]
gi|294327870|gb|EFG09513.1| D-3-phosphoglycerate dehydrogenase [Streptomyces clavuligerus ATCC
27064]
Length = 538
Score = 97.0 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 43/94 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I + + D+ + M+ + D G+V VG ILGE G+NIA + R +
Sbjct: 443 KNVQKIVAIGDHDVDLALADHMLVLRYEDRPGVVGTVGRILGEAGLNIAGMQVSRHEEGG 502
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D ++ V+ ++S + +
Sbjct: 503 EALVVLTVDDTVPVPVIAEISAEIGAASARSVNL 536
>gi|328885238|emb|CCA58477.1| D-3-phosphoglycerate dehydrogenase [Streptomyces venezuelae ATCC
10712]
Length = 529
Score = 96.6 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 44/90 (48%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + + + D+ + M+ + D G+V VG ILGE G+NIA + R++ A+
Sbjct: 439 KIVAVGDYDVDLALADHMVVLRYEDRPGVVGTVGRILGEAGLNIAGMQVSRAEEGGEALV 498
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D ++ VL +++ + +
Sbjct: 499 VLTVDDTLPAPVLAEIAAEIGATSARSVNL 528
>gi|258424138|ref|ZP_05687020.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A9635]
gi|257845759|gb|EEV69791.1| phosphoglycerate dehydrogenase [Staphylococcus aureus A9635]
Length = 534
Score = 96.6 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + D+ + I + D G+V G +LG+Y INIA LGR++
Sbjct: 434 VFTGFGPRIVRINNFSVDLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTK 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ A+ L +D + N+++++L
Sbjct: 494 AGGDALMILSVDQPVSNNIIDELKQV 519
>gi|186685295|ref|YP_001868491.1| D-3-phosphoglycerate dehydrogenase [Nostoc punctiforme PCC 73102]
gi|186467747|gb|ACC83548.1| D-3-phosphoglycerate dehydrogenase [Nostoc punctiforme PCC 73102]
Length = 526
Score = 96.6 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 43/92 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + + + +V + M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 430 LLGEREIHLTDVDGFPINVPPSKYMLFTLHRDMPGIIGKLGSLLGSFNVNIASMQVGRKI 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID + +L+++ IR
Sbjct: 490 VRGDAVMALSIDDPLPEGILDEIIKVPGIRDA 521
>gi|312898434|ref|ZP_07757824.1| phosphoglycerate dehydrogenase [Megasphaera micronuciformis F0359]
gi|310620353|gb|EFQ03923.1| phosphoglycerate dehydrogenase [Megasphaera micronuciformis F0359]
Length = 538
Score = 96.6 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 39/96 (40%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F+ + + ++I E D ++ + D ++ + +LGE INI +G
Sbjct: 435 LFNQTEAKIVQIDEYRVDFKPENYLLLAPHIDQPNMIGQIATVLGEAKINITGMQVGNMT 494
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
I + ++ I N V+ KL I +K
Sbjct: 495 QKGTNIMAVAVEDDIPNDVMVKLRSINGILDMKLIH 530
>gi|237756137|ref|ZP_04584709.1| phosphoglycerate dehydrogenase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691701|gb|EEP60737.1| phosphoglycerate dehydrogenase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 529
Score = 96.6 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 47/92 (51%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
D PR + + D++ +++ N D+ G++ +G +L ++ +NIA F LGR + +
Sbjct: 436 DKFPRIMMVDNYWIDIEPQGVILMFENKDVPGVIGKLGTLLAKHNVNIAGFRLGRLEKGK 495
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ L +D + +LE++ I KQ
Sbjct: 496 IALGALQLDDRLNEEILEEIHQIPEIIKAKQV 527
>gi|254392671|ref|ZP_05007846.1| D-3-phosphoglycerate dehydrogenase [Streptomyces clavuligerus ATCC
27064]
gi|197706333|gb|EDY52145.1| D-3-phosphoglycerate dehydrogenase [Streptomyces clavuligerus ATCC
27064]
Length = 532
Score = 96.6 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 43/94 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I + + D+ + M+ + D G+V VG ILGE G+NIA + R +
Sbjct: 437 KNVQKIVAIGDHDVDLALADHMLVLRYEDRPGVVGTVGRILGEAGLNIAGMQVSRHEEGG 496
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D ++ V+ ++S + +
Sbjct: 497 EALVVLTVDDTVPVPVIAEISAEIGAASARSVNL 530
>gi|323489546|ref|ZP_08094773.1| L-serine dehydratase subunit beta [Planococcus donghaensis MPA1U2]
gi|323396677|gb|EGA89496.1| L-serine dehydratase subunit beta [Planococcus donghaensis MPA1U2]
Length = 220
Score = 96.6 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 38/93 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + I +V+ D G + V N L +Y INI H + R +
Sbjct: 126 GGGKIEITELNGFPLRLSGNHPAILVVHEDRSGCIANVANCLYKYNINIGHMEVSRKERG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ + +D ++ V+E L I V +
Sbjct: 186 HMALMVIEVDQNVDKEVMEDLRKLPNITQVTRI 218
>gi|254518005|ref|ZP_05130061.1| L-serine dehydratase beta subunit [Clostridium sp. 7_2_43FAA]
gi|226911754|gb|EEH96955.1| L-serine dehydratase beta subunit [Clostridium sp. 7_2_43FAA]
Length = 226
Score = 96.6 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 39/94 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++I I + DI G V V NIL + +NIA +LGRSQ
Sbjct: 127 GGGNIEIVEINGNKVKFTGAYATIITSHRDIPGTVAKVTNILYDNKVNIAFLNLGRSQRG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A +D I N ++EK+ I V
Sbjct: 187 KNATMTFEVDSKISNELIEKIKKVEGIEKVILIN 220
>gi|239826577|ref|YP_002949201.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Geobacillus sp. WCH70]
gi|239806870|gb|ACS23935.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Geobacillus sp. WCH70]
Length = 220
Score = 96.6 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 42/93 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ + + I++ D G + V N+L +Y INI H + R +
Sbjct: 126 GGGKIEIIELNGFELKLSGHHPALLIMHNDRYGAIASVANVLAKYAINIGHMEVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ + ID I +V+++L+ I V
Sbjct: 186 KEALMTIEIDQPIDQTVIDELTALPHIIQVTNI 218
>gi|313679957|ref|YP_004057696.1| d-3-phosphoglycerate dehydrogenase [Oceanithermus profundus DSM
14977]
gi|313152672|gb|ADR36523.1| D-3-phosphoglycerate dehydrogenase [Oceanithermus profundus DSM
14977]
Length = 520
Score = 96.6 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G+PR ++I + +++ ++ +N D G+V VG +LGE G+NIA LGR Q
Sbjct: 428 GRPRLVRIDDYALEIEPTGAVLVCINRDQPGVVGRVGTLLGEAGVNIAGLQLGRDQPGGR 487
Query: 65 AISFLCIDGSILN 77
A+ L +D +
Sbjct: 488 ALFVLAVDQPPPD 500
>gi|291548342|emb|CBL21450.1| L-serine ammonia-lyase [Ruminococcus sp. SR1/5]
Length = 222
Score = 96.6 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 40/95 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R ++I + D I +++ D G+V ++ L E INIA L R
Sbjct: 128 GGGKVRIVEINHVKVDFTGEYSAIIVIHQDTPGVVAYITRCLSERNINIAFMRLFRESKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A + + DG + ++E + N I V +
Sbjct: 188 TTAYTIVESDGHLPEDIVESIHRNTNIHDVMVVQM 222
>gi|167040920|ref|YP_001663905.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter sp. X514]
gi|300913871|ref|ZP_07131188.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter sp. X561]
gi|307725445|ref|YP_003905196.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter sp. X513]
gi|166855160|gb|ABY93569.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter sp. X514]
gi|300890556|gb|EFK85701.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter sp. X561]
gi|307582506|gb|ADN55905.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter sp. X513]
Length = 531
Score = 96.6 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 45/93 (48%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R ++ + + M+ + N D+ G++ +GN+LG++GINI+ + +++
Sbjct: 438 GEEIRIVEYMGHKVNFEPTEYMLFVKNKDVPGVIGHIGNVLGDFGINISTMQVSPNKNDG 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D I + +E L+ +I +
Sbjct: 498 TALMIVSTDREIPDEAVESLNKLNSIIKARAVR 530
>gi|256751636|ref|ZP_05492511.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter ethanolicus
CCSD1]
gi|256749445|gb|EEU62474.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter ethanolicus
CCSD1]
Length = 531
Score = 96.6 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 45/93 (48%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R ++ + + M+ + N D+ G++ +GN+LG++GINI+ + +++
Sbjct: 438 GEEIRIVEYMGHKVNFEPTEYMLFVKNKDVPGVIGHIGNVLGDFGINISTMQVSPNKNDG 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D I + +E L+ +I +
Sbjct: 498 TALMIVSTDREIPDEAVESLNKLNSIIKARAVR 530
>gi|158312947|ref|YP_001505455.1| D-3-phosphoglycerate dehydrogenase [Frankia sp. EAN1pec]
gi|158108352|gb|ABW10549.1| D-3-phosphoglycerate dehydrogenase [Frankia sp. EAN1pec]
Length = 529
Score = 96.6 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 38/90 (42%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ I D+ + D GIV VG +LGE INIA+ + R + A+
Sbjct: 437 KITAIDGFEVDLRPEDHLAFFRYEDRPGIVGAVGALLGEAHINIANAQVSRLSAGGEALM 496
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D ++ +L +++ + + +
Sbjct: 497 SLSLDDAVAPDILAEIAKIIGASYARAVSI 526
>gi|227499137|ref|ZP_03929272.1| D-3-phosphoglycerate dehydrogenase [Acidaminococcus sp. D21]
gi|226904584|gb|EEH90502.1| D-3-phosphoglycerate dehydrogenase [Acidaminococcus sp. D21]
Length = 529
Score = 96.6 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 41/97 (42%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V D +P +++ FD MI N D G++ +G +LG +NIA + R +
Sbjct: 433 VTPDNQPHITEVEGYQFDTIPAPYMIFARNDDKPGMIGQIGTLLGAGHVNIATMQVSRKK 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D ++ + LE + I +
Sbjct: 493 KEGTAMMVLTVDSAVDGATLEIVRNLDGISDAQLVRL 529
>gi|295102336|emb|CBK99881.1| L-serine ammonia-lyase [Faecalibacterium prausnitzii L2-6]
Length = 222
Score = 96.6 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 37/94 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R + I + D + +V D G+V + IL E G+NIA L R
Sbjct: 128 GGGKVRIVGINGVAVDFSGEYNALIVVQRDKPGVVAHITKILSERGVNIAFMRLFREGKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + D + V + L N I V +
Sbjct: 188 HKAYTIVESDQHLPEGVAQLLLENPNINDVMIVQ 221
>gi|326443626|ref|ZP_08218360.1| D-3-phosphoglycerate dehydrogenase [Streptomyces clavuligerus ATCC
27064]
Length = 525
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 43/94 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I + + D+ + M+ + D G+V VG ILGE G+NIA + R +
Sbjct: 430 KNVQKIVAIGDHDVDLALADHMLVLRYEDRPGVVGTVGRILGEAGLNIAGMQVSRHEEGG 489
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D ++ V+ ++S + +
Sbjct: 490 EALVVLTVDDTVPVPVIAEISAEIGAASARSVNL 523
>gi|116494693|ref|YP_806427.1| L-serine deaminase [Lactobacillus casei ATCC 334]
gi|191638191|ref|YP_001987357.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Lactobacillus casei BL23]
gi|227535323|ref|ZP_03965372.1| L-serine ammonia-lyase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239631705|ref|ZP_04674736.1| L-serine ammonia-lyase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301066253|ref|YP_003788276.1| l-serine deaminase [Lactobacillus casei str. Zhang]
gi|116104843|gb|ABJ69985.1| L-serine ammonia-lyase [Lactobacillus casei ATCC 334]
gi|190712493|emb|CAQ66499.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Lactobacillus casei BL23]
gi|227187057|gb|EEI67124.1| L-serine ammonia-lyase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239526170|gb|EEQ65171.1| L-serine ammonia-lyase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300438660|gb|ADK18426.1| L-serine deaminase [Lactobacillus casei str. Zhang]
gi|327382223|gb|AEA53699.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Lactobacillus casei LC2W]
gi|327385420|gb|AEA56894.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Lactobacillus casei BD-II]
Length = 221
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + +I + +G+ ++ D+ G++ V I + GINI + R
Sbjct: 129 GGGNIQITEINGFKISLSMGQPTYITIHEDVPGMIAQVTKIFSDAGINIGTMTVTRESKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + D + +L KL + V FE
Sbjct: 189 EQAIMIIETD-DYQDDILAKLKQLPHMVNVTYFE 221
>gi|303232287|ref|ZP_07318985.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Atopobium vaginae PB189-T1-4]
gi|302481610|gb|EFL44672.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Atopobium vaginae PB189-T1-4]
Length = 529
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 34/95 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ R I I ++ I + + D G++ + L INIA RS+
Sbjct: 128 GGGRMRISSIDNIAIELSGDLPTIFVAHTDTPGVLASLTRELSCAHINIATLRTFRSKKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A S + ID I ++ L + V
Sbjct: 188 GQAYSVIEIDNDIPEELVGALRHIHHVGLVNMVNI 222
>gi|167036576|ref|YP_001664154.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320115004|ref|YP_004185163.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166855410|gb|ABY93818.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319928095|gb|ADV78780.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 531
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 45/93 (48%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R ++ + + M+ + N D+ G++ +GN+LG++GINI+ + +++
Sbjct: 438 GEEVRIVEYMGHKVNFEPTEYMLFVKNKDVPGVIGHIGNVLGDFGINISTMQVSPNKNDG 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D I + +E L+ +I +
Sbjct: 498 TALMIVSTDKEIPDEAVESLNKLNSIIKARAVR 530
>gi|119508833|ref|ZP_01627985.1| D-3-phosphoglycerate dehydrogenase [Nodularia spumigena CCY9414]
gi|119466362|gb|EAW47247.1| D-3-phosphoglycerate dehydrogenase [Nodularia spumigena CCY9414]
Length = 526
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 43/92 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ D + + +V + M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 430 LLGDKEIHLTDVDGFPINVPPSKYMLFTLHRDMPGIIGKLGSLLGSFNVNIASMQVGRKI 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID + + +L ++ IR
Sbjct: 490 VRGDAVMALSIDDPLPDGILAEIVKVAGIRDA 521
>gi|160936062|ref|ZP_02083435.1| hypothetical protein CLOBOL_00958 [Clostridium bolteae ATCC
BAA-613]
gi|158440872|gb|EDP18596.1| hypothetical protein CLOBOL_00958 [Clostridium bolteae ATCC
BAA-613]
Length = 271
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 43/93 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R +I I+ D + I++ D LG++ + L E +NIA L R
Sbjct: 169 GGGKVRISRIDHIDVDFSGEYSTLIIIHRDRLGVLAHITRCLSEGYVNIAFMKLFRETKG 228
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A S + DGS+ + ++ ++ N ++ V
Sbjct: 229 DRAYSIIEFDGSLPDHMVSRIYENPDVQDVMFI 261
>gi|239944498|ref|ZP_04696435.1| D-3-phosphoglycerate dehydrogenase [Streptomyces roseosporus NRRL
15998]
gi|239990958|ref|ZP_04711622.1| D-3-phosphoglycerate dehydrogenase [Streptomyces roseosporus NRRL
11379]
gi|291447964|ref|ZP_06587354.1| D-3-phosphoglycerate dehydrogenase [Streptomyces roseosporus NRRL
15998]
gi|291350911|gb|EFE77815.1| D-3-phosphoglycerate dehydrogenase [Streptomyces roseosporus NRRL
15998]
Length = 530
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 43/90 (47%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I E + D+ + M+ + D G+V VG ILGE G+NIA + R+ A+
Sbjct: 439 KIVAIGEHDVDLALADHMVVLRYQDRPGVVGAVGKILGEAGLNIAGMQVSRAAEGGEALV 498
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D ++ VL +++ + +
Sbjct: 499 VLTVDETVPQPVLTEIAEEIGASSARSVNL 528
>gi|291548832|emb|CBL25094.1| L-serine ammonia-lyase [Ruminococcus torques L2-14]
Length = 222
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 38/95 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +I + D I +V D+ G+V ++ + L + +NIA L R
Sbjct: 128 GGGKVHITQINHVEVDFTGEYSAIIVVQKDVPGVVAWITSCLSDRRVNIAFMRLFRESKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A + + DG + + + + N + V +
Sbjct: 188 HTAYTIVESDGKLPEEIADTIRQNEHVLDVMVVQM 222
>gi|302537104|ref|ZP_07289446.1| phosphoglycerate dehydrogenase [Streptomyces sp. C]
gi|302445999|gb|EFL17815.1| phosphoglycerate dehydrogenase [Streptomyces sp. C]
Length = 529
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 42/90 (46%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + E + D+ + MI + D G+V VG +LGE G+NIA + R++ A+
Sbjct: 439 KIVGVGEYDVDLALADHMIVLRYTDRPGVVGKVGQLLGEAGLNIAGMQVARAEEGGEALV 498
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D + VL +S + +
Sbjct: 499 VLTVDAEVPVDVLAAISEEIGAASARTVNL 528
>gi|110803391|ref|YP_698379.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens SM101]
gi|110683892|gb|ABG87262.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens SM101]
Length = 226
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +++ + + + D G V V +L E+ INIA ++ R+Q
Sbjct: 127 GGGSIEIVEVNGNEANFSGAYPTLITCHDDKFGTVNKVTKLLLEHEINIAFMNVSRTQKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
A L ID + SV++++ I+ V +
Sbjct: 187 MDATMTLEIDNKVDESVIKRMEEIDGIKKVILINLEEE 224
>gi|318061963|ref|ZP_07980684.1| D-3-phosphoglycerate dehydrogenase [Streptomyces sp. SA3_actG]
gi|318077433|ref|ZP_07984765.1| D-3-phosphoglycerate dehydrogenase [Streptomyces sp. SA3_actF]
Length = 531
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 45/90 (50%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I E D+ + M+ + AD G+V VG +LGE GINIA + R++ A++
Sbjct: 441 KIVAIGEHTVDLALADHMVVLRYADRPGVVGTVGRVLGESGINIAGMQVSRAEEGGEALA 500
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D S+ VL +++ + +
Sbjct: 501 VLTVDDSVPADVLAEVAQETGATSARAVDL 530
>gi|284929797|ref|YP_003422319.1| D-3-phosphoglycerate dehydrogenase [cyanobacterium UCYN-A]
gi|284810241|gb|ADB95938.1| D-3-phosphoglycerate dehydrogenase [cyanobacterium UCYN-A]
Length = 525
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 47/97 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ SDG+ R + +V M+ ++ D+ GI+ +G++LG + +NIA +GR
Sbjct: 429 LLSDGEIRITNVDLFPINVPPSNHMLFTIHRDMPGIIGKIGSLLGSFNVNIASMQVGRKI 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ + +D + +S+L ++ IR +
Sbjct: 489 VRGDAVMAVSLDDPLPDSLLLEIMKVTGIRDAYTIKL 525
>gi|110803155|ref|YP_699877.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens SM101]
gi|110683656|gb|ABG87026.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens SM101]
Length = 226
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 37/94 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + I + D+ G V V I+ E+ INIA + R++
Sbjct: 127 GGGSIKITEVNGSVVEFTGEYPTLIISHKDVPGAVSKVTAIVYEHNINIAFMKVFRTERG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A +D I +++++ + +
Sbjct: 187 KAARMVFEMDSPITKDIIDEIKKVEAVEKLVVIN 220
>gi|328955672|ref|YP_004373005.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Coriobacterium glomerans PW2]
gi|328455996|gb|AEB07190.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Coriobacterium glomerans PW2]
Length = 536
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 4/99 (4%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ R +I ++ D+ + I + D G++ + L E GINIA R+
Sbjct: 128 GGGRVRISRIDGVSVDLSGEYDTLFIAHRDERGVLARLTVELSERGINIAFMRTYRTARG 187
Query: 63 EHAISFLCIDGSIL----NSVLEKLSVNVTIRFVKQFEF 97
A + +D ++ +L + I
Sbjct: 188 GSAYTVFELDELPEGDARAELVRRLRASPEIATATVISI 226
>gi|269127749|ref|YP_003301119.1| D-3-phosphoglycerate dehydrogenase [Thermomonospora curvata DSM
43183]
gi|268312707|gb|ACY99081.1| D-3-phosphoglycerate dehydrogenase [Thermomonospora curvata DSM
43183]
Length = 531
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 42/91 (46%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R ++I + ++ M D GIV VG +LG+ INIA +GRS A+
Sbjct: 438 RIVEINGYDMELVPAEHMAFFSYTDRPGIVGVVGRLLGDAQINIASMQVGRSSKGGKALI 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
L +D +I +LE + + ++ + +
Sbjct: 498 ALTVDSAIGPDLLETIRTEIGADMGRRVDLD 528
>gi|296272027|ref|YP_003654658.1| D-3-phosphoglycerate dehydrogenase [Arcobacter nitrofigilis DSM
7299]
gi|296096202|gb|ADG92152.1| D-3-phosphoglycerate dehydrogenase [Arcobacter nitrofigilis DSM
7299]
Length = 527
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + R +++ FD+ MI + N+DI G++ VG LG+ INIA F L R +
Sbjct: 433 VFDEDVQRIVEVNGFVFDIAPKGNMIFLRNSDIPGVIGTVGKTLGDNNINIADFRLSRGK 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + + VL++L V E
Sbjct: 493 --DSALAVILVDTFVSHDVLKQLENLEAAISVSYVEI 527
>gi|257433819|ref|ZP_05610177.1| LOW QUALITY PROTEIN: D-3-phosphoglycerate dehydrogenase
[Staphylococcus aureus subsp. aureus E1410]
gi|257281912|gb|EEV12049.1| LOW QUALITY PROTEIN: D-3-phosphoglycerate dehydrogenase
[Staphylococcus aureus subsp. aureus E1410]
Length = 294
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + D+ + I + D G+V G +LG+Y INIA LGR++
Sbjct: 194 VFTGFGPRIVRINNFSVDLKPNQYQIVSYHNDTPGMVGKTGALLGKYNINIASMTLGRTE 253
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ A+ L +D + N+++++L
Sbjct: 254 AGGDALMILSVDQPVSNNIIDELKQV 279
>gi|302522080|ref|ZP_07274422.1| phosphoglycerate dehydrogenase [Streptomyces sp. SPB78]
gi|302430975|gb|EFL02791.1| phosphoglycerate dehydrogenase [Streptomyces sp. SPB78]
Length = 531
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 45/90 (50%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I E D+ + M+ + AD G+V VG +LGE GINIA + R++ A++
Sbjct: 441 KIVAIGEHTVDLALADHMVVLRYADRPGVVGTVGRVLGESGINIAGMQVSRAEEGGEALA 500
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D S+ VL +++ + +
Sbjct: 501 VLTVDDSVPADVLAEVAQETGATSARAVDL 530
>gi|239928756|ref|ZP_04685709.1| D-3-phosphoglycerate dehydrogenase [Streptomyces ghanaensis ATCC
14672]
gi|291437078|ref|ZP_06576468.1| D-3-phosphoglycerate dehydrogenase [Streptomyces ghanaensis ATCC
14672]
gi|291339973|gb|EFE66929.1| D-3-phosphoglycerate dehydrogenase [Streptomyces ghanaensis ATCC
14672]
Length = 529
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 45/90 (50%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + + + D+ + M+ + D G+V VG ILGE GINIA + R+ A++
Sbjct: 439 KIVAVGDYDVDLALADHMVVLRYEDRPGVVGTVGRILGEAGINIAGMQVARAAVGGEALA 498
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D ++ +VL +L+ + +
Sbjct: 499 VLTVDDTVSAAVLGELAAEIGATSARSVNL 528
>gi|18311605|ref|NP_563539.1| L-serine dehydratase beta subunit [Clostridium perfringens str. 13]
gi|110800656|ref|YP_697313.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens ATCC 13124]
gi|168207896|ref|ZP_02633901.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens E str. JGS1987]
gi|168211591|ref|ZP_02637216.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens B str. ATCC 3626]
gi|168214809|ref|ZP_02640434.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens CPE str. F4969]
gi|168218017|ref|ZP_02643642.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens NCTC 8239]
gi|182626420|ref|ZP_02954173.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens D str. JGS1721]
gi|18146289|dbj|BAB82329.1| probable L-serine dehydratase beta subunit [Clostridium perfringens
str. 13]
gi|110675303|gb|ABG84290.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens ATCC 13124]
gi|170660789|gb|EDT13472.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens E str. JGS1987]
gi|170710446|gb|EDT22628.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens B str. ATCC 3626]
gi|170713717|gb|EDT25899.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens CPE str. F4969]
gi|177908294|gb|EDT70847.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens D str. JGS1721]
gi|182379947|gb|EDT77426.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens NCTC 8239]
Length = 226
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 37/94 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + I + D+ G V V I+ E+ INIA + R++
Sbjct: 127 GGGSIKITEVNGSVVEFTGEYPTLIISHKDVPGAVSKVTAIVYEHNINIAFMKVFRTERG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A +D I +++++ + +
Sbjct: 187 KAARMVFEMDSPITKDIIDEIKKVEAVEKLVVIN 220
>gi|313112501|ref|ZP_07798171.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310625165|gb|EFQ08450.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 222
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 38/94 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R ++I + D + +V D G+V + IL + +NIA L R +
Sbjct: 128 GGGKVRIVRINGVEVDFTGEYNALIVVQKDKPGVVAHITKILSDRSVNIAFMRLFREEKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + D + V + L N I V +
Sbjct: 188 HTAYTIVESDERLPEGVDQLLLANPNINDVMVVQ 221
>gi|268679255|ref|YP_003303686.1| D-3-phosphoglycerate dehydrogenase [Sulfurospirillum deleyianum DSM
6946]
gi|268617286|gb|ACZ11651.1| D-3-phosphoglycerate dehydrogenase [Sulfurospirillum deleyianum DSM
6946]
Length = 528
Score = 95.9 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + R + I FD MI N D+ G++ + +IL + GINIA F LGR
Sbjct: 433 VFGEDEQRIVGINGFKFDFKPKGKMIIFKNNDVPGVIANITSILAKEGINIADFRLGRGA 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
+ A++ + +D I ++ +L+ T +V+
Sbjct: 493 H-QFAMAVILVDTDIDKKIITELNKLETCVWVEY 525
>gi|220932470|ref|YP_002509378.1| L-serine ammonia-lyase, beta subunit [Halothermothrix orenii H 168]
gi|219993780|gb|ACL70383.1| L-serine ammonia-lyase, beta subunit [Halothermothrix orenii H 168]
Length = 218
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 36/93 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I ++ + +++ D G V + +ILG Y +NIA + R +
Sbjct: 123 GGGNIVVHNIDGYEVNIRGNYPTLWVLHRDKPGEVGIITSILGCYKLNIAFMRVFRKKRG 182
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
S + +D + +++ L I V+
Sbjct: 183 TIGSSIIELDQDVDEDIIDHLQGMKDILKVRYI 215
>gi|325181642|emb|CCA16093.1| phosphoserine aminotransferase putative [Albugo laibachii Nc14]
Length = 964
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 45/97 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF +PR I + +++ D M+ N D G++ + ++L ++ INI F L R
Sbjct: 460 VFGKNQPRLIALNDLSVDCIPTGSMLMFQNQDQPGVLNSITSVLAKHDINIGCFGLARES 519
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
HA+ L +D I N +++L + ++
Sbjct: 520 KEAHAVGILNLDDPIPNQAIQELDALDQLSNLRPVTL 556
>gi|20807488|ref|NP_622659.1| L-serine deaminase [Thermoanaerobacter tengcongensis MB4]
gi|254479508|ref|ZP_05092829.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Carboxydibrachium pacificum DSM 12653]
gi|20516016|gb|AAM24263.1| L-serine deaminase [Thermoanaerobacter tengcongensis MB4]
gi|214034547|gb|EEB75300.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Carboxydibrachium pacificum DSM 12653]
Length = 222
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 30/94 (31%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I I + + + D GIV V +L + INIA + R
Sbjct: 127 GGGNVLLKEINGIEVEFTGEYETLITTHIDKPGIVAAVTKVLADCNINIAFMRVYRHAKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ AI + D I E + I
Sbjct: 187 DKAIMVIESDQEIPERAKEVIKNIDGILNAIILN 220
>gi|212639604|ref|YP_002316124.1| L-serine dehydratase subunit beta [Anoxybacillus flavithermus WK1]
gi|212561084|gb|ACJ34139.1| L-serine dehydratase (beta chain) [Anoxybacillus flavithermus WK1]
Length = 245
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 44/93 (47%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ + + I++ D G + V N+L +Y INI H + R +
Sbjct: 151 GGGKIEIIELNGFELKLSGHHPALLIMHNDRYGAIAGVANVLAKYAINIGHMEVSRKEKG 210
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ + +D +I ++++E+L I V +
Sbjct: 211 KQALMTIEVDQNIDDAIVEQLKALPHIIDVTKI 243
>gi|169343447|ref|ZP_02864447.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens C str. JGS1495]
gi|169298399|gb|EDS80488.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens C str. JGS1495]
Length = 226
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 37/94 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + I + D+ G V V I+ E+ INIA + R++
Sbjct: 127 GGGSIKITEVNGSVVEFTGEYPTLIISHKDVPGAVSKVTAIVYEHNINIAFMKVFRTERG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A +D I +++++ + +
Sbjct: 187 KAARMVFEMDSPITKDIIDEIKKVEAVEKLVVIN 220
>gi|111225204|ref|YP_715998.1| D-3-phosphoglycerate dehydrogenase [Frankia alni ACN14a]
gi|111152736|emb|CAJ64480.1| D-3-phosphoglycerate dehydrogenase (PGDH) [Frankia alni ACN14a]
Length = 530
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 38/93 (40%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ I D+ + D GIV VG +LGE INIA + R Q+ A+
Sbjct: 438 KITAIDGFEVDIRPEAHLAFFRYEDRPGIVGAVGALLGEANINIASAQVSRIQAGGEALM 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
L +D ++ +L ++ + + + +
Sbjct: 498 SLSLDDAVAPDILADIAKIIGASYARAVSIQAE 530
>gi|331004363|ref|ZP_08327836.1| L-serine dehydratase [Lachnospiraceae oral taxon 107 str. F0167]
gi|330411093|gb|EGG90512.1| L-serine dehydratase [Lachnospiraceae oral taxon 107 str. F0167]
Length = 221
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 40/94 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R +KI ++ D I +V+ D G++ ++ IL E+ INIA L R
Sbjct: 128 GGGKVRIVKIDRVDIDFSGEYSAIILVHRDRPGVIAYITKILSEHNINIAFMKLYRESKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + D I + L N I V +
Sbjct: 188 NKAYTIIESDEMITPDIKSGLYKNEHISQVMIVQ 221
>gi|116873248|ref|YP_850029.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|116742126|emb|CAK21250.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 220
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 39/90 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ E + I I++ D G + V +++ ++ INI + R
Sbjct: 126 GGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVSRKVKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D + ++ K++ I V
Sbjct: 186 DEALMVIEVDQQVEQDLITKIAELPGIYQV 215
>gi|290957185|ref|YP_003488367.1| D-3-phosphoglycerate dehydrogenase [Streptomyces scabiei 87.22]
gi|260646711|emb|CBG69808.1| putative D-3-phosphoglycerate dehydrogenase [Streptomyces scabiei
87.22]
Length = 529
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 44/92 (47%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ + + E + D+ + M+ + D G+V VG + GE GINIA + RS + A
Sbjct: 437 HQKIVAVGEYDVDLALADHMVVLSYVDRPGVVGTVGRVFGEAGINIAGMQVARSTAGGEA 496
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
++ L +D ++ +VL ++ + +
Sbjct: 497 LAVLTVDDTVPPAVLAEVEAEIGATSARSVNL 528
>gi|116751067|ref|YP_847754.1| D-3-phosphoglycerate dehydrogenase [Syntrophobacter fumaroxidans
MPOB]
gi|116700131|gb|ABK19319.1| D-3-phosphoglycerate dehydrogenase [Syntrophobacter fumaroxidans
MPOB]
Length = 526
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 42/96 (43%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F PR ++I + + + ++ I N D G + +G LG++ INI+ +G+
Sbjct: 431 FGKKDPRMVRINDFRLEAALEGHLLLIYNIDTPGTIGAIGTCLGKHHINISMMDVGQVLE 490
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
I FL D + V E+L + V+ E
Sbjct: 491 RGQNIIFLRTDTPVPGHVKEELLAMDNVNVVQAIEL 526
>gi|16800993|ref|NP_471261.1| hypothetical protein lin1927 [Listeria innocua Clip11262]
gi|16414428|emb|CAC97157.1| lin1927 [Listeria innocua Clip11262]
Length = 220
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 39/90 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ E + I I++ D G + V +++ ++ INI + R
Sbjct: 126 GGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVSRKVKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D + ++ K++ I V
Sbjct: 186 DEALMVIEVDQQVEQDLISKIAELPGIYQV 215
>gi|254478955|ref|ZP_05092315.1| ACT domain protein [Carboxydibrachium pacificum DSM 12653]
gi|214035101|gb|EEB75815.1| ACT domain protein [Carboxydibrachium pacificum DSM 12653]
Length = 256
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 45/93 (48%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R ++ + + M+ + N D+ G++ +GN+LG++GINI+ + +++
Sbjct: 161 GEELRIVEYMGHKVNFEPTEYMLFVKNKDVPGVIGHIGNVLGDFGINISTMQVSPNKNDG 220
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D I +E L+ +I K +
Sbjct: 221 TALMLVSTDKEIPEEAVESLNKLNSIIKAKAVK 253
>gi|154147887|ref|YP_001406068.1| D-3-phosphoglycerate dehydrogenase [Campylobacter hominis ATCC
BAA-381]
gi|153803896|gb|ABS50903.1| phosphoglycerate dehydrogenase [Campylobacter hominis ATCC BAA-381]
Length = 525
Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+D + R + I D MI N D+ G++ V IL + INIA F LGR +
Sbjct: 430 VFNDDEERILNIDGFKTDFKPKGKMIIFKNTDVPGVIASVSAILAKDKINIADFRLGRGE 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A++ + +D I SVL++LS T +
Sbjct: 490 DGN-ALAVILVDEDISKSVLDELSALSTCLLARYV 523
>gi|294496187|ref|YP_003542680.1| D-3-phosphoglycerate dehydrogenase [Methanohalophilus mahii DSM
5219]
gi|292667186|gb|ADE37035.1| D-3-phosphoglycerate dehydrogenase [Methanohalophilus mahii DSM
5219]
Length = 523
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 37/94 (39%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R I I D+ MI + + ++ ILG++ INI+ +GR Q
Sbjct: 430 EDDLRIIMIDGQRVDLAPSGYMIVSNHINRPNVIGPCCMILGDHEINISGMQVGRVQICG 489
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
I L +D + +LE++ I K
Sbjct: 490 KTIMALNVDSEVSEDILEQIRHVDGIIDAKLVSL 523
>gi|289579412|ref|YP_003478039.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter italicus
Ab9]
gi|289529125|gb|ADD03477.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter italicus
Ab9]
Length = 533
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 47/93 (50%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R ++ + + + M+ + N D+ G++ +GN+LG++GINI+ + +++
Sbjct: 438 GEEIRIVEYMDHKVNFEPTENMLFVKNKDVPGVIGHIGNVLGDFGINISTMQVSPNKNDG 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D I + +E L+ +I + +
Sbjct: 498 TALMIVSTDKEIPDEAVESLNKLNSIIKARAVK 530
>gi|320449971|ref|YP_004202067.1| L-serine dehydratase, iron-sulfur-dependent subunit beta [Thermus
scotoductus SA-01]
gi|320150140|gb|ADW21518.1| L-serine dehydratase, iron-sulfur-dependent, subunit beta [Thermus
scotoductus SA-01]
Length = 220
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 36/93 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G R + + + I N D G+V V IL + +NIA+ + R +
Sbjct: 123 GGGLVRIFDLDGFEVRITGAAPTLVIRNVDTPGVVARVARILADDEVNIAYLTVSRKKRG 182
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ L +D + L L I +V+Q
Sbjct: 183 GEAMMSLEVDRPLPEVPLRYLEHLSYILWVRQI 215
>gi|317497232|ref|ZP_07955556.1| L-serine dehydratase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316895477|gb|EFV17635.1| L-serine dehydratase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 222
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 40/95 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R +I ++ D + ++ D G+V ++ L + +NIA L R
Sbjct: 128 GGGKARICRINDVEVDFTGEYSTLIVIQKDKPGVVTYITKCLSDQDVNIAFMRLFRESKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A S + DG + ++ E++ + + V +
Sbjct: 188 NTAYSIVESDGLLPENIAEEIRKSPNVSDVMIIQL 222
>gi|167765968|ref|ZP_02438021.1| hypothetical protein CLOSS21_00459 [Clostridium sp. SS2/1]
gi|167712325|gb|EDS22904.1| hypothetical protein CLOSS21_00459 [Clostridium sp. SS2/1]
gi|291558762|emb|CBL37562.1| L-serine ammonia-lyase [butyrate-producing bacterium SSC/2]
Length = 222
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 40/95 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R +I ++ D + ++ D G+V ++ L + +NIA L R
Sbjct: 128 GGGKARICRINDVEVDFTGEYSTLIVIQKDKPGVVTYITKCLSDQDVNIAFMRLFRESKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A S + DG + ++ E++ + + V +
Sbjct: 188 NTAYSIVESDGLLPENIAEEIRKSPNVSDVMIIQL 222
>gi|307265859|ref|ZP_07547409.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter wiegelii Rt8.B1]
gi|326389803|ref|ZP_08211367.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter ethanolicus JW 200]
gi|306919134|gb|EFN49358.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter wiegelii Rt8.B1]
gi|325994071|gb|EGD52499.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter ethanolicus JW 200]
Length = 222
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 32/94 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I I + + + D GIV V I +Y INIA + R
Sbjct: 127 GGGNVLLKEINGIEVEFTGEYETLITNHIDRPGIVANVTKIFADYKINIAFMRVYRHSKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ AI + D I ++ E + I
Sbjct: 187 DKAIMVIESDQKIPDAAKETIKNIDGILNAIIIN 220
>gi|116620780|ref|YP_822936.1| D-3-phosphoglycerate dehydrogenase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223942|gb|ABJ82651.1| D-3-phosphoglycerate dehydrogenase [Candidatus Solibacter usitatus
Ellin6076]
Length = 525
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 55/94 (58%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
KPR +++ I + + +I + N D+ G++ VG +LG+ INIA+F LGR + T
Sbjct: 430 DKPRLLQVDGIYCEAALCGFLIVMKNQDVPGVIGHVGTVLGKNCINIANFSLGRREGTPE 489
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A++ + DG + SVL +L + ++F + EF+
Sbjct: 490 AVALVSTDGLVPESVLLQLKEHAAVKFARSVEFH 523
>gi|312830102|emb|CBX34944.1| phosphoglycerate dehydrogenase [Staphylococcus aureus subsp. aureus
ECT-R 2]
Length = 534
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 46/86 (53%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ PR ++I + D+ + I + D +V G +LG+Y INIA LGR++
Sbjct: 434 VFTGFGPRIVRINNFSVDLKPNQYQIVSYHNDTPDMVGKTGALLGKYNINIASMTLGRTE 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ A+ L +D + N+++++L
Sbjct: 494 AGGDALMILSVDQPVSNNIIDELKQV 519
>gi|220913021|ref|YP_002488330.1| D-3-phosphoglycerate dehydrogenase [Arthrobacter chlorophenolicus
A6]
gi|219859899|gb|ACL40241.1| D-3-phosphoglycerate dehydrogenase [Arthrobacter chlorophenolicus
A6]
Length = 529
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I ++ I ++ + AD G++ +G+ILG INIA + R ++
Sbjct: 438 KLVGINGFEVEIPISEHLVVVAYADRPGVIGTIGHILGMNNINIAGMQVARHDEGGQVLA 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
L ID S+ VL+ + + V++ +
Sbjct: 498 LLTIDSSVPQQVLDAIKAGIGAEMVREVDLE 528
>gi|168208058|ref|ZP_02634063.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens E str. JGS1987]
gi|168215909|ref|ZP_02641534.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens NCTC 8239]
gi|169341138|ref|ZP_02627517.2| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens C str. JGS1495]
gi|182625326|ref|ZP_02953100.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens D str. JGS1721]
gi|169299745|gb|EDS81797.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens C str. JGS1495]
gi|170660641|gb|EDT13324.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens E str. JGS1987]
gi|177909484|gb|EDT71931.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens D str. JGS1721]
gi|182381961|gb|EDT79440.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens NCTC 8239]
Length = 226
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 39/98 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +++ + + + D G V V +L E+ INIA ++ R+Q
Sbjct: 127 GGGSIEIVEVNGNEANFSGAYPTLITCHDDKFGTVNKVTKLLLEHEINIAFMNVSRTQKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
A L ID I SV++++ I+ V +
Sbjct: 187 MDATMTLEIDNKIDESVIKRMEEIDGIKKVILINLEEE 224
>gi|297545554|ref|YP_003677856.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296843329|gb|ADH61845.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 533
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 47/93 (50%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R ++ + + + M+ + N D+ G++ +GN+LG++GINI+ + +++
Sbjct: 438 GEEIRIVEYMDHKVNFEPTENMLFVKNKDVPGVIGHIGNVLGDFGINISTMQVSPNKNDG 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D I + +E L+ +I + +
Sbjct: 498 TALMIVSTDKEIPDEAVESLNKLNSIIKARAVK 530
>gi|167040060|ref|YP_001663045.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter sp. X514]
gi|256752699|ref|ZP_05493549.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter ethanolicus CCSD1]
gi|300914144|ref|ZP_07131460.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter sp. X561]
gi|307724620|ref|YP_003904371.1| L-serine dehydratase, iron-sulfur-dependent subunit beta
[Thermoanaerobacter sp. X513]
gi|166854300|gb|ABY92709.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter sp. X514]
gi|256748418|gb|EEU61472.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter ethanolicus CCSD1]
gi|300889079|gb|EFK84225.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter sp. X561]
gi|307581681|gb|ADN55080.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter sp. X513]
Length = 222
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 32/94 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I I + + + D GIV V I +Y INIA + R
Sbjct: 127 GGGNVLLKEINGIEVEFTGEYETLITNHIDRPGIVANVTKIFADYKINIAFMRVYRHSKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ AI + D I ++ E + I
Sbjct: 187 DKAIMVIESDQKIPDAAKETIKNIDGILNAIIIN 220
>gi|116671082|ref|YP_832015.1| D-3-phosphoglycerate dehydrogenase [Arthrobacter sp. FB24]
gi|116611191|gb|ABK03915.1| D-3-phosphoglycerate dehydrogenase [Arthrobacter sp. FB24]
Length = 529
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 42/91 (46%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + ++ I ++ + AD G++ +G+ILG INIA + R ++
Sbjct: 438 KLVGVNGYEVEIPISEHLVVVAYADRPGVIGTIGHILGMNNINIAGMQVARQAEGGQVLA 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
L ID S+ VL+ + + V++ +
Sbjct: 498 LLTIDSSVPQQVLDAIKAGIGAEMVREVDLE 528
>gi|325963764|ref|YP_004241670.1| D-3-phosphoglycerate dehydrogenase [Arthrobacter phenanthrenivorans
Sphe3]
gi|323469851|gb|ADX73536.1| D-3-phosphoglycerate dehydrogenase [Arthrobacter phenanthrenivorans
Sphe3]
Length = 529
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 42/91 (46%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I ++ I ++ + D G++ +G+ILG INIA + RS ++
Sbjct: 438 KLVGINGFEVEIPISEHLVVVGYTDRPGVIGTIGHILGMNNINIAGMQVARSDEGGQVLA 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
L ID ++ VL+ + + V++ +
Sbjct: 498 LLTIDSAVPQQVLDAIKAGIGADMVREVDLE 528
>gi|328950639|ref|YP_004367974.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Marinithermus hydrothermalis DSM 14884]
gi|328450963|gb|AEB11864.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Marinithermus hydrothermalis DSM 14884]
Length = 215
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 36/93 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G R I V + I N D G++ V ++ + +NIA+ R +
Sbjct: 118 GGGIVRIFSIDGFEVRVTGQAPTLLIKNVDTPGVIARVARVIADDEVNIAYLTCARQKRG 177
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ + +D + L+ L+ I +V+
Sbjct: 178 GEAMMSIEVDRDLSQPALDYLNHLSYILWVRML 210
>gi|315282814|ref|ZP_07871137.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
marthii FSL S4-120]
gi|313613543|gb|EFR87364.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
marthii FSL S4-120]
Length = 220
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ E + I I++ D G + V +++ ++ INI + R
Sbjct: 126 GGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVSRKVKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D + +++ K++ I V
Sbjct: 186 DEALMVIEVDQQVEQALISKIAELPGIYQV 215
>gi|46908045|ref|YP_014434.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
monocytogenes str. 4b F2365]
gi|226224416|ref|YP_002758523.1| L-serine dehydratase (beta chain) [Listeria monocytogenes
Clip81459]
gi|254826145|ref|ZP_05231146.1| L-serine dehydratase [Listeria monocytogenes FSL J1-194]
gi|254852720|ref|ZP_05242068.1| L-serine dehydratase [Listeria monocytogenes FSL R2-503]
gi|254899490|ref|ZP_05259414.1| L-serine dehydratase (beta chain) [Listeria monocytogenes J0161]
gi|254933285|ref|ZP_05266644.1| L-serine dehydratase [Listeria monocytogenes HPB2262]
gi|254936698|ref|ZP_05268395.1| L-serine dehydratase [Listeria monocytogenes F6900]
gi|254994429|ref|ZP_05276619.1| L-serine dehydratase (beta chain) [Listeria monocytogenes FSL
J2-064]
gi|255521928|ref|ZP_05389165.1| L-serine dehydratase (beta chain) [Listeria monocytogenes FSL
J1-175]
gi|284802259|ref|YP_003414124.1| hypothetical protein LM5578_2015 [Listeria monocytogenes 08-5578]
gi|284995401|ref|YP_003417169.1| hypothetical protein LM5923_1966 [Listeria monocytogenes 08-5923]
gi|300763874|ref|ZP_07073871.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
monocytogenes FSL N1-017]
gi|46881315|gb|AAT04611.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
monocytogenes serotype 4b str. F2365]
gi|225876878|emb|CAS05587.1| Putative L-serine dehydratase (beta chain) [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258606043|gb|EEW18651.1| L-serine dehydratase [Listeria monocytogenes FSL R2-503]
gi|258609295|gb|EEW21903.1| L-serine dehydratase [Listeria monocytogenes F6900]
gi|284057821|gb|ADB68762.1| hypothetical protein LM5578_2015 [Listeria monocytogenes 08-5578]
gi|284060868|gb|ADB71807.1| hypothetical protein LM5923_1966 [Listeria monocytogenes 08-5923]
gi|293584845|gb|EFF96877.1| L-serine dehydratase [Listeria monocytogenes HPB2262]
gi|293595385|gb|EFG03146.1| L-serine dehydratase [Listeria monocytogenes FSL J1-194]
gi|300515610|gb|EFK42660.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
monocytogenes FSL N1-017]
gi|328466167|gb|EGF37324.1| hypothetical protein LM1816_11237 [Listeria monocytogenes 1816]
gi|328473540|gb|EGF44377.1| hypothetical protein LM220_09060 [Listeria monocytogenes 220]
Length = 220
Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ E + I I++ D G + V +++ ++ INI + R
Sbjct: 126 GGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVSRKVKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D + +++ K++ I V
Sbjct: 186 DEALMVIEVDQQVEQALISKIAELPGIYQV 215
>gi|226324270|ref|ZP_03799788.1| hypothetical protein COPCOM_02049 [Coprococcus comes ATCC 27758]
gi|225206718|gb|EEG89072.1| hypothetical protein COPCOM_02049 [Coprococcus comes ATCC 27758]
Length = 222
Score = 95.1 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 37/95 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R +I + D I +V D G+V ++ L E GINIA L R
Sbjct: 128 GGGKARLCRINGVEVDFTGEYSSIVVVQKDAPGVVAYITKCLSELGINIAFMRLFRESKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A + + D + + + + N + V +
Sbjct: 188 NTAYTIVESDDLVPEDIADTIRRNKNVYNVMVVQM 222
>gi|315303715|ref|ZP_07874228.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
ivanovii FSL F6-596]
gi|313627913|gb|EFR96533.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
ivanovii FSL F6-596]
Length = 220
Score = 95.1 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ E + I I++ D G + V +++ ++ INI + R
Sbjct: 126 GGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVSRKIKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D + +++ KL+ I V
Sbjct: 186 DEALMVIEVDQQVEQALITKLAELPGIYQV 215
>gi|289435156|ref|YP_003465028.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|289171400|emb|CBH27944.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|313632775|gb|EFR99741.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
seeligeri FSL N1-067]
gi|313637343|gb|EFS02827.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
seeligeri FSL S4-171]
Length = 220
Score = 95.1 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ E + I I++ D G + V +++ ++ INI + R
Sbjct: 126 GGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVSRKVKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D + +++ K++ I V
Sbjct: 186 DEALMVIEVDQQVEQALITKIAELPGIYQV 215
>gi|18309970|ref|NP_561904.1| L-serine dehydratase beta subunit [Clostridium perfringens str. 13]
gi|168211802|ref|ZP_02637427.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens B str. ATCC 3626]
gi|168213916|ref|ZP_02639541.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens CPE str. F4969]
gi|18144648|dbj|BAB80694.1| L-serine dehydratase beta subunit [Clostridium perfringens str. 13]
gi|170710249|gb|EDT22431.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens B str. ATCC 3626]
gi|170714565|gb|EDT26747.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens CPE str. F4969]
Length = 226
Score = 95.1 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 39/98 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +++ + + + D G V V +L E+ INIA ++ R+Q
Sbjct: 127 GGGSIEIVEVNGNEANFSGAYPTLITCHDDKFGTVNKVTKLLLEHEINIAFMNVSRTQKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
A L ID I SV++++ I+ V +
Sbjct: 187 MDATMTLEIDNKIDESVIKRMEEIDGIKKVILINLEEE 224
>gi|224137644|ref|XP_002327177.1| predicted protein [Populus trichocarpa]
gi|222835492|gb|EEE73927.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DGKP + DV + +I D G+V VG+ILGE +N++ +GR +
Sbjct: 504 DGKPHLTMVGSFGVDVSMEGSLILCRQVDQPGMVGSVGSILGEENVNVSFMSVGRIAPRK 563
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ + +D L+++ + + +
Sbjct: 564 QAVMTIGVDEEPSKEALKRIREIPAVEEIVFLKL 597
>gi|56964072|ref|YP_175803.1| L-serine dehydratase beta subunit [Bacillus clausii KSM-K16]
gi|56910315|dbj|BAD64842.1| L-serine dehydratase beta subunit [Bacillus clausii KSM-K16]
Length = 220
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 43/94 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + I + + D G++ V N+L ++ +NI H + R +
Sbjct: 126 GGGKIEIVELNGFDLRLSGNHPAILVAHLDRYGVIAAVSNLLAKHQLNIGHMEVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E A+ + +D ++ ++L +L I V +
Sbjct: 186 ETALMVIEVDQNVDKALLLELERLPHITHVSKIH 219
>gi|237749847|ref|ZP_04580327.1| d-3-phosphoglycerate dehydrogenase [Helicobacter bilis ATCC 43879]
gi|229374597|gb|EEO24988.1| d-3-phosphoglycerate dehydrogenase [Helicobacter bilis ATCC 43879]
Length = 535
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
++ RF I D++ MI + N D+ G++ +G+ + ++ +NIA F LGR
Sbjct: 437 IYDGHIVRFNNINGFGMDLEPNGNMILVRNTDVPGVIGSIGHTIAKHKVNIADFRLGRKT 496
Query: 61 STEH--AISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A++ + +D ++ +L+ L V+
Sbjct: 497 DSSERNALALILVDSAVSTQLLDDLKAIPECLSVRNV 533
>gi|311030775|ref|ZP_07708865.1| D-3-phosphoglycerate dehydrogenase [Bacillus sp. m3-13]
Length = 524
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 39/91 (42%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
R + + + D ++ + + D G++ +G I G++ NIA H+GR AI
Sbjct: 434 ARIVHMNGFDIDFAPSGHLLYVQHTDRPGVIGQLGLIFGKHETNIATMHVGRMLQGGKAI 493
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L D + +++++ + I E
Sbjct: 494 MMLSFDQPLEKVLVDEILLIPDISSAITLEL 524
>gi|110799908|ref|YP_695691.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens ATCC 13124]
gi|110674555|gb|ABG83542.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium perfringens ATCC 13124]
Length = 226
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 39/98 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +++ + + + D G V V +L E+ INIA ++ R+Q
Sbjct: 127 GGGSIEIVEVNGNEANFSGAYPTLITCHDDKFGTVNKVTKLLLEHEINIAFMNVSRTQKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
A L ID I SV++++ I+ V +
Sbjct: 187 MDATMTLEIDNKIDESVIKRMEEIDGIKKVILINLEEE 224
>gi|326390875|ref|ZP_08212427.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter ethanolicus
JW 200]
gi|325993134|gb|EGD51574.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter ethanolicus
JW 200]
Length = 533
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 46/93 (49%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R ++ + + M+ + N DI G++ +GN+LG++GINI+ + +++
Sbjct: 438 GEEVRIVEYMGHKVNFEPTEYMLFVKNKDIPGVIGHIGNVLGDFGINISTMQVSPNKNDG 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D I + +E L+ +I + +
Sbjct: 498 TALMIVSTDKEIPDEAVESLNKLNSIIKARAVK 530
>gi|251796380|ref|YP_003011111.1| D-3-phosphoglycerate dehydrogenase [Paenibacillus sp. JDR-2]
gi|247544006|gb|ACT01025.1| D-3-phosphoglycerate dehydrogenase [Paenibacillus sp. JDR-2]
Length = 530
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R ++I + DV +I I + D GI+ VG +LG +NIA +GR AI
Sbjct: 440 RVVQIDKFPVDVTPEGNLILISHNDKPGIIGRVGTLLGNNDVNIATMQVGRQLVGGSAIM 499
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D + +LE+L+ + K+
Sbjct: 500 VLTVDKNAGKDILEQLTSLSDLNTAKEITL 529
>gi|51891147|ref|YP_073838.1| D-3-phosphoglycerate dehydrogenase [Symbiobacterium thermophilum
IAM 14863]
gi|51854836|dbj|BAD38994.1| phosphoglycerate dehydrogenase [Symbiobacterium thermophilum IAM
14863]
Length = 540
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 42/94 (44%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG RF+ + ++ D+ R M+ + D G+V G L INIA HLGR Q
Sbjct: 441 DGGMRFVAVDGLHIDMAPSRHMLVSQHRDQPGMVGRFGMALAARDINIAGLHLGRHQPRG 500
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID ++ +L + + V+
Sbjct: 501 MALMLLQIDEPAPPDLVAELREAMAVDTVQAVTL 534
>gi|315658015|ref|ZP_07910888.1| phosphoglycerate dehydrogenase [Staphylococcus lugdunensis M23590]
gi|315496905|gb|EFU85227.1| phosphoglycerate dehydrogenase [Staphylococcus lugdunensis M23590]
Length = 539
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
PR I+I + + D + + D+ GIV G +LG INIA LGR+ A+
Sbjct: 440 PRIIRINDFSVDFQPNAYQLITYHNDVPGIVGRTGALLGREQINIASMSLGRNTEGGQAM 499
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFV 92
+ +D I + V++ L +
Sbjct: 500 MIIAVDQPITDKVIQHLKQTQQFTKI 525
>gi|313618305|gb|EFR90356.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
innocua FSL S4-378]
gi|313623268|gb|EFR93512.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
innocua FSL J1-023]
Length = 223
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 39/90 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ E + I I++ D G + V +++ ++ INI + R
Sbjct: 129 GGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVSRKVKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D + ++ K++ I V
Sbjct: 189 DEALMVIEVDQQVEQDLISKIAELPGIYQV 218
>gi|289550521|ref|YP_003471425.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus lugdunensis
HKU09-01]
gi|289180053|gb|ADC87298.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus lugdunensis
HKU09-01]
Length = 539
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
PR I+I + + D + + D+ GIV G +LG INIA LGR+ A+
Sbjct: 440 PRIIRINDFSVDFQPNAYQLITYHNDVPGIVGRTGALLGREQINIASMSLGRNTEGGQAM 499
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFV 92
+ +D I + V++ L +
Sbjct: 500 MIIAVDQPITDKVIQHLKQTQQFTKI 525
>gi|290893057|ref|ZP_06556046.1| L-serine dehydratase [Listeria monocytogenes FSL J2-071]
gi|290557417|gb|EFD90942.1| L-serine dehydratase [Listeria monocytogenes FSL J2-071]
gi|307571395|emb|CAR84574.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
monocytogenes L99]
Length = 220
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ E + I I++ D G + V +++ ++ INI + R
Sbjct: 126 GGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVSRKVKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D + +++ K++ I V
Sbjct: 186 DEALMVIEVDQHVEQALISKIAELPGIYQV 215
>gi|329936828|ref|ZP_08286507.1| D-3-phosphoglycerate dehydrogenase [Streptomyces griseoaurantiacus
M045]
gi|329303753|gb|EGG47637.1| D-3-phosphoglycerate dehydrogenase [Streptomyces griseoaurantiacus
M045]
Length = 529
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 46/92 (50%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ + + E + D+ + M+ + AD G+V +G +LGE GINIA + R+ + A
Sbjct: 437 HQKIVAVGEYDVDLALADHMVVLRYADRPGVVGTLGRVLGEAGINIAGMQVSRAVAGGEA 496
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
++ L +D ++ V+ +L+ + +
Sbjct: 497 LAVLTVDDTVPPHVVAELAEEIGATSARSINL 528
>gi|284049355|ref|YP_003399694.1| D-3-phosphoglycerate dehydrogenase [Acidaminococcus fermentans DSM
20731]
gi|283953576|gb|ADB48379.1| D-3-phosphoglycerate dehydrogenase [Acidaminococcus fermentans DSM
20731]
Length = 529
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
D P ++Q ++D+ MI N D G++ +G +LG +NIA+ + R T
Sbjct: 436 DETPHITEVQGYHYDLVPEHYMILAKNDDKPGMIGQMGTLLGAAHVNIANMQVARKPKTG 495
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+A+ + +D + + L+ ++ I+
Sbjct: 496 NAMMIMTVDSPVEKATLQMIAGLDGIQSADFVTL 529
>gi|298674284|ref|YP_003726034.1| D-3-phosphoglycerate dehydrogenase [Methanohalobium evestigatum
Z-7303]
gi|298287272|gb|ADI73238.1| D-3-phosphoglycerate dehydrogenase [Methanohalobium evestigatum
Z-7303]
Length = 525
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 1 VFSDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRS 59
V +GK R I+I +FD+ M+ + + + ++ +LG+ INI+ +G+
Sbjct: 428 VSGNGKIGRIIQIDGYHFDIVPTENMLVVDHMNRPNVIGPCAIMLGKNDINISGMQVGQV 487
Query: 60 QSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
E I L +D + S+L ++ I K
Sbjct: 488 GLGEKTIMVLNVDSEVPESILNEMKSIEGILDAKPVTL 525
>gi|166031293|ref|ZP_02234122.1| hypothetical protein DORFOR_00980 [Dorea formicigenerans ATCC
27755]
gi|166028698|gb|EDR47455.1| hypothetical protein DORFOR_00980 [Dorea formicigenerans ATCC
27755]
Length = 223
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 33/96 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ R + I D + + N D G + V L IN+A + R +
Sbjct: 125 GGGRIRVSVLDGIEVDFSGESNTLIVRNMDRPGCITEVSAALSYEKINVATMQVFRHKRG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A+ + D I +V+ +L I V
Sbjct: 185 GSAVMVVETDQFIPENVVNELKKKEDILEVISLNLE 220
>gi|315651163|ref|ZP_07904194.1| L-serine dehydratase [Eubacterium saburreum DSM 3986]
gi|315486561|gb|EFU76912.1| L-serine dehydratase [Eubacterium saburreum DSM 3986]
Length = 221
Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R +KI E++ D + +V+ D G++ ++ IL E+ INIA L R
Sbjct: 128 GGGKVRIVKIGEVDIDFSGEYSALILVHKDRPGMIAYITKILCEHSINIAFMKLYRESKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + D I N+V + L N I V +
Sbjct: 188 NKAYTIIESDEPIQNTVKDDLYKNEYISQVMIVQ 221
>gi|302558214|ref|ZP_07310556.1| phosphoglycerate dehydrogenase [Streptomyces griseoflavus Tu4000]
gi|302475832|gb|EFL38925.1| phosphoglycerate dehydrogenase [Streptomyces griseoflavus Tu4000]
Length = 529
Score = 94.7 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 44/90 (48%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I E + D+ + M+ + D G+V VG +LGE GINIA + R+ A++
Sbjct: 439 KIVAIGEYDVDLALADHMVVLRYEDRPGVVGTVGRVLGEAGINIAGMQVARATVGGEALA 498
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D ++ V+ +L+ + +
Sbjct: 499 VLTVDDTVSAGVIGELAEEIGATSARSVNL 528
>gi|297191887|ref|ZP_06909285.1| D-3-phosphoglycerate dehydrogenase [Streptomyces pristinaespiralis
ATCC 25486]
gi|197721137|gb|EDY65045.1| D-3-phosphoglycerate dehydrogenase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 530
Score = 94.7 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 44/90 (48%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I E + D+ + M + D G+V VG ILGE G+NIA + R++ A+
Sbjct: 439 KIVAIGEHDVDLALADHMAVLRYEDRPGVVGTVGRILGEAGLNIAGMQVSRAEEGGEALV 498
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D ++ +VL ++S + +
Sbjct: 499 VLTVDDTVPPAVLAEISDEIGAASARSVNL 528
>gi|288553103|ref|YP_003425038.1| L-serine dehydratase subunit beta [Bacillus pseudofirmus OF4]
gi|288544263|gb|ADC48146.1| L-serine dehydratase beta subunit [Bacillus pseudofirmus OF4]
Length = 220
Score = 94.7 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 45/94 (47%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ + I +V+ D G++ V N+L ++ INI H + R +
Sbjct: 126 GGGKIEIIELNGFQLKLSGNHPAILVVHNDRYGVIAGVSNVLAKHEINIGHMEVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A+ + +D ++ N++L++L I V +
Sbjct: 186 KEALMVIEVDQNVPNTILKELESLPNIVKVTKIH 219
>gi|238922103|ref|YP_002935617.1| L-serine dehydratase [Eubacterium eligens ATCC 27750]
gi|238873775|gb|ACR73483.1| L-serine dehydratase [Eubacterium eligens ATCC 27750]
Length = 219
Score = 94.7 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 33/96 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ +I I+ + + + N D G V V ++L +NIA L R+
Sbjct: 124 GGSRINIAQIDGISTNFSGDYPTLVVHNMDQPGHVAEVTSMLAHKSVNIAAMQLYRAGRG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
+++ L D + + L + V
Sbjct: 184 GNSVMVLECDQEVPEEGINWLRHAEGVVKVTYLGLE 219
>gi|329727877|gb|EGG64327.1| phosphoglycerate dehydrogenase [Staphylococcus epidermidis VCU144]
Length = 531
Score = 94.7 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+ P ++I + + D + + + D GIV GN+LG +GINIA LGR+
Sbjct: 433 VFAGFGPSIVRINDYSLDFKPNQYQLVTCHKDKPGIVGQTGNLLGSHGINIASMTLGRND 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ L ID V++ L+ +
Sbjct: 493 AGGDALMILSIDQQASEEVIKILNETSGFNKI 524
>gi|242374013|ref|ZP_04819587.1| phosphoglycerate dehydrogenase [Staphylococcus epidermidis
M23864:W1]
gi|242348264|gb|EES39866.1| phosphoglycerate dehydrogenase [Staphylococcus epidermidis
M23864:W1]
Length = 531
Score = 94.7 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 43/92 (46%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V + PR ++I + D + I + D GIV GN+LG +GINIA LGR+
Sbjct: 433 VLAGFGPRIVRINNFSLDFKPNQYQIVTCHKDKPGIVGHTGNLLGNHGINIASMTLGRND 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID + V++ L + +
Sbjct: 493 EGGEALMILSIDQQATDEVIKILEESGGFNKI 524
>gi|325107117|ref|YP_004268185.1| D-3-phosphoglycerate dehydrogenase [Planctomyces brasiliensis DSM
5305]
gi|324967385|gb|ADY58163.1| D-3-phosphoglycerate dehydrogenase [Planctomyces brasiliensis DSM
5305]
Length = 546
Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR-- 58
+F R + + + D + M+ + D+ G++ VG LG++ INI H LGR
Sbjct: 436 LFGREYLRLVLLDDYQLDGYLDGTMMVYRHKDVPGLIGAVGTTLGKHKINIGHMALGRET 495
Query: 59 SQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
Q +I+ +D + ++E++ + + V+ +
Sbjct: 496 EQPGGDSIAVFNLDTRPSDEIIEEIRQHPDVTDVEIVQL 534
>gi|297616224|ref|YP_003701383.1| D-3-phosphoglycerate dehydrogenase [Syntrophothermus lipocalidus
DSM 12680]
gi|297144061|gb|ADI00818.1| D-3-phosphoglycerate dehydrogenase [Syntrophothermus lipocalidus
DSM 12680]
Length = 528
Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ G+P ++I + D+ +++ N D G++ LGE GINI+ +
Sbjct: 433 LTGGGRPYIVEINGFDTDLYPRGIVVLAENDDRPGVIGPFTTALGEAGINISMMRVS--S 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ + +D ++ ++ L +L +R V+ F
Sbjct: 491 KDGVNMMAVSVDSNVDDATLARLRSVSGVRKVRVLRF 527
>gi|258645980|ref|ZP_05733449.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Dialister invisus DSM 15470]
gi|260403351|gb|EEW96898.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Dialister invisus DSM 15470]
Length = 220
Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ +I ++ + + D+ GIV VG IL E +NI++ + R
Sbjct: 124 GGGRVMITEIDGFPVEITGEEYTLLTNHNDVPGIVADVGKILAEEHVNISNMRVFRKGKG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSV-NVTIRFVKQFEF 97
A+ + D + SV+ ++ N I V +
Sbjct: 184 TEAVMIIHSDQKVPESVICRIKEGNKNINSVMTLDI 219
>gi|32474150|ref|NP_867144.1| D-3-phosphoglycerate dehydrogenase [Rhodopirellula baltica SH 1]
gi|32444687|emb|CAD74689.1| phosphoglycerate dehydrogenase [Rhodopirellula baltica SH 1]
gi|327541027|gb|EGF27580.1| D-3-phosphoglycerate dehydrogenase [Rhodopirellula baltica WH47]
Length = 540
Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR-- 58
+ PR I + + + ++ V+ D+ GI+ VG G +G+NIA +GR
Sbjct: 431 ILGHEMPRLILVNGYRLESFLDGKLLVFVHKDVPGIIGRVGTTFGSHGVNIAQMAVGREG 490
Query: 59 SQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L +DG + + L+ L I + +
Sbjct: 491 DAPGGAAIGVLSLDGEVPTAALDDLLAIDAITECQVIDM 529
>gi|47093050|ref|ZP_00230828.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
monocytogenes str. 4b H7858]
gi|47096534|ref|ZP_00234124.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
monocytogenes str. 1/2a F6854]
gi|224500044|ref|ZP_03668393.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
monocytogenes Finland 1988]
gi|293596571|ref|ZP_05262383.2| L-serine dehydratase [Listeria monocytogenes J2818]
gi|47015066|gb|EAL06009.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
monocytogenes str. 1/2a F6854]
gi|47018551|gb|EAL09306.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
monocytogenes str. 4b H7858]
gi|293590353|gb|EFF98687.1| L-serine dehydratase [Listeria monocytogenes J2818]
Length = 223
Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ E + I I++ D G + V +++ ++ INI + R
Sbjct: 129 GGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVSRKVKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D + +++ K++ I V
Sbjct: 189 DEALMVIEVDQQVEQALISKIAELPGIYQV 218
>gi|254294765|ref|YP_003060788.1| D-3-phosphoglycerate dehydrogenase [Hirschia baltica ATCC 49814]
gi|254043296|gb|ACT60091.1| D-3-phosphoglycerate dehydrogenase [Hirschia baltica ATCC 49814]
Length = 525
Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 50/94 (53%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G+ R + ++++ + ++ I N D G + +G+ILGE G+NIA F+LGR +
Sbjct: 432 NGQSRIVAVKDMALEAKFRPFILFINNNDEAGFIGSLGSILGEAGVNIATFNLGREEQGG 491
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+ + ID + + K+ +R+ K F
Sbjct: 492 DAIAMVGIDQDVPAEAMAKIEALTQVRYAKVLRF 525
>gi|15806309|ref|NP_295015.1| D-3-phosphoglycerate dehydrogenase [Deinococcus radiodurans R1]
gi|6459038|gb|AAF10861.1|AE001976_4 D-3-phosphoglycerate dehydrogenase [Deinococcus radiodurans R1]
Length = 544
Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF PR ++++ +++ ++ N D G V + N+LG +GINIA LGRS+
Sbjct: 449 VFGK-SPRLTRLRDYRVELEPEGFILIASNLDKPGAVAKLSNLLGTWGINIAGMALGRSE 507
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ L +D S+ L+ + I
Sbjct: 508 KGGQALFTLTLDDSLTPEQLQAIRDLDVIESAFLVR 543
>gi|153813132|ref|ZP_01965800.1| hypothetical protein RUMOBE_03541 [Ruminococcus obeum ATCC 29174]
gi|149830787|gb|EDM85877.1| hypothetical protein RUMOBE_03541 [Ruminococcus obeum ATCC 29174]
Length = 222
Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 38/95 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R +KI + D I +++ D G+ ++ L + +NIA L R
Sbjct: 128 GGGKVRIVKINSVQVDFSGEYSAIIVIHQDKPGVAAYITKCLSDRNVNIAFMRLFRESKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
E A + + DG + + + N I V +
Sbjct: 188 EIAYTIVESDGRLPEDIGNTIRKNQHIHEVMIVQM 222
>gi|325265482|ref|ZP_08132204.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium sp. D5]
gi|324029261|gb|EGB90554.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium sp. D5]
Length = 241
Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 34/93 (36%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ K+ I + + + N D G V V ++L E INIA L R +
Sbjct: 144 GGGRIMVNKLDGIMVNCTGECPTLIVQNHDRPGHVAAVTSMLAEDSINIATLQLYRGKKG 203
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ + ID + + + I V
Sbjct: 204 GDAVMVIEIDQPVPEASIRWFEQQDGIIKVTYI 236
>gi|226355874|ref|YP_002785614.1| D-3-phosphoglycerate dehydrogenase [Deinococcus deserti VCD115]
gi|226317864|gb|ACO45860.1| putative Phosphoglycerate dehydrogenase [Deinococcus deserti
VCD115]
Length = 544
Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF PR ++++ +++ ++ N D G V + N+LG +G+NIA LGR+
Sbjct: 449 VFGR-SPRLTRLRDYRVELEPEGYILIASNEDKPGAVAKLSNLLGTWGVNIAGMALGRAA 507
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ L +D + L+ + I
Sbjct: 508 KGGQALFTLTLDDGLSAEQLQAIRNLDVIDSAYLVR 543
>gi|154174389|ref|YP_001407860.1| D-3-phosphoglycerate dehydrogenase [Campylobacter curvus 525.92]
gi|112803368|gb|EAU00712.1| phosphoglycerate dehydrogenase [Campylobacter curvus 525.92]
Length = 525
Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + R + I D MI N D+ G++ + IL + INIA F LGR
Sbjct: 430 VFGETEQRIVGINGFKTDFKPKGKMIIFKNHDVPGVIAQISKILADEKINIADFRLGR-G 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
A++ + +D +I L KL+ T + +
Sbjct: 489 DNGMALAVILVDENISKETLTKLNALDTCVWAQY 522
>gi|225569474|ref|ZP_03778499.1| hypothetical protein CLOHYLEM_05559 [Clostridium hylemonae DSM
15053]
gi|225161682|gb|EEG74301.1| hypothetical protein CLOHYLEM_05559 [Clostridium hylemonae DSM
15053]
Length = 226
Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 35/96 (36%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ R K+ I+ + + N D G + V L E I+IA + R +
Sbjct: 125 GGGRIRVSKLDGIDVSFSGESNTLIVRNIDQPGCITEVAASLSEEDIDIATMQVFRDKKG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A+ + D + L++L I V N
Sbjct: 185 GCAVMVVETDQVVSRDALDRLEGKEGIVNVTFLNVN 220
>gi|294631551|ref|ZP_06710111.1| phosphoglycerate dehydrogenase [Streptomyces sp. e14]
gi|292834884|gb|EFF93233.1| phosphoglycerate dehydrogenase [Streptomyces sp. e14]
Length = 529
Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 45/90 (50%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + E + D+ + M+ + D G+V VG I+GE G+NIA + R+ A++
Sbjct: 439 KIVAVGEYDVDLALADHMVVLRYEDRPGVVGTVGRIIGEAGVNIAGMQVARAAVGGEALA 498
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D ++ +VL ++S + +
Sbjct: 499 VLTVDDTVPPAVLSEVSAEIGATSARSVNL 528
>gi|91774294|ref|YP_566986.1| D-3-phosphoglycerate dehydrogenase [Methanococcoides burtonii DSM
6242]
gi|91713309|gb|ABE53236.1| D-3-phosphoglycerate dehydrogenase [Methanococcoides burtonii DSM
6242]
Length = 523
Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 38/94 (40%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+P+ + I D+ MI + + ++ +LGE INI+ +GR +
Sbjct: 430 GREPKIVMIDGQYVDLVPNGFMIVSNHVNRPNVIGPCCIVLGENNINISGMQVGRVEVGG 489
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ I L +D + +L+++ I K
Sbjct: 490 NTIMALNVDNEVSEGILDEIRAINGILDAKLVTL 523
>gi|224372944|ref|YP_002607316.1| D-3-phosphoglycerate dehydrogenase [Nautilia profundicola AmH]
gi|223588899|gb|ACM92635.1| D-3-phosphoglycerate dehydrogenase [Nautilia profundicola AmH]
Length = 522
Score = 94.3 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
PR ++ ++ + + + MI N D+ G++ VG L + INIA F LGR++ A
Sbjct: 432 HPRIVEFKDFDLEFEPKGKMIFFKNTDVPGVIGEVGMTLAKNNINIADFRLGRNKE-GQA 490
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFV 92
++ + +D + VL +L V
Sbjct: 491 MAVIIVDNEVNEDVLNELRNLKAALSV 517
>gi|217964034|ref|YP_002349712.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
monocytogenes HCC23]
gi|217333304|gb|ACK39098.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
monocytogenes HCC23]
Length = 223
Score = 94.3 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ E + I I++ D G + V +++ ++ INI + R
Sbjct: 129 GGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVSRKVKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D + +++ K++ I V
Sbjct: 189 DEALMVIEVDQHVEQALISKIAELPGIYQV 218
>gi|323140346|ref|ZP_08075277.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Phascolarctobacterium sp. YIT 12067]
gi|322415150|gb|EFY05938.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Phascolarctobacterium sp. YIT 12067]
Length = 221
Score = 94.3 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 37/93 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ + +I ++ I V+ D G++ V + L G+NIA L RS
Sbjct: 125 GGGQVQVTEIDGFPVELTGRLPAILTVHIDTRGVIALVTSTLANAGVNIATMRLFRSDKG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A + D ++ ++ +S I V+
Sbjct: 185 GMASMVIECDEAVPQEIINLISALQQIESVRFI 217
>gi|313673092|ref|YP_004051203.1| d-3-phosphoglycerate dehydrogenase [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939848|gb|ADR19040.1| D-3-phosphoglycerate dehydrogenase [Calditerrivibrio nitroreducens
DSM 19672]
Length = 540
Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+D R I I FDV + + N D G++ VG ILG + INIA F L R +
Sbjct: 445 VFNDNIGRVIFIDNFYFDVVPKGIFLYFNNYDRPGVIGKVGTILGNHNINIAGFELSRQK 504
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI+F+ +D I N VL+++ + K E
Sbjct: 505 Q-GQAIAFVSVDNPIGNEVLKEILKIDGMIDAKVLEL 540
>gi|283796130|ref|ZP_06345283.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium sp. M62/1]
gi|291076346|gb|EFE13710.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium sp. M62/1]
gi|295092230|emb|CBK78337.1| L-serine ammonia-lyase [Clostridium cf. saccharolyticum K10]
gi|295115517|emb|CBL36364.1| L-serine ammonia-lyase [butyrate-producing bacterium SM4/1]
Length = 223
Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 39/95 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R +I ++ D + ++ D G++ + + L INIA L R
Sbjct: 129 GGGKVRITRINQVEVDFSGEYNTLIVIQRDRQGVIAHITDCLNRANINIAFLKLFRESKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A S + DG + + +++ N ++ V +
Sbjct: 189 STAYSIVEFDGILPEGIPDRIKENPDVKDVMLIQL 223
>gi|126649438|ref|ZP_01721679.1| phosphoglycerate dehydrogenase [Bacillus sp. B14905]
gi|126593763|gb|EAZ87686.1| phosphoglycerate dehydrogenase [Bacillus sp. B14905]
Length = 535
Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 42/97 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + R +K+++ DV ++ I N D G + V L E INIA +GR+Q
Sbjct: 439 LLNGLGARIVKVEDYVVDVIPQGHLLYIKNTDKPGAIGRVATKLAEKEINIATMQVGRAQ 498
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID + + L ++ I VK
Sbjct: 499 VGGTAVMMLTIDNVVTDEDLAFVAQLENIDEVKAINL 535
>gi|224437370|ref|ZP_03658342.1| D-3-phosphoglycerate dehydrogenase [Helicobacter cinaedi CCUG
18818]
gi|313143835|ref|ZP_07806028.1| D-3-phosphoglycerate dehydrogenase [Helicobacter cinaedi CCUG
18818]
gi|313128866|gb|EFR46483.1| D-3-phosphoglycerate dehydrogenase [Helicobacter cinaedi CCUG
18818]
Length = 526
Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF D R I + FD++ MI N D+ G+V VG+ILG Y +NIA F L R
Sbjct: 432 VFEDRHLRITSINQFQFDIEPKGKMIFFKNTDVPGVVGLVGSILGNYKVNIADFRLARQN 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A++ + +D + N + +L VK
Sbjct: 492 K--EAMAVILVDSDVPNEAINELEAIPACLGVKIVN 525
>gi|187780165|ref|ZP_02996638.1| hypothetical protein CLOSPO_03761 [Clostridium sporogenes ATCC
15579]
gi|187773790|gb|EDU37592.1| hypothetical protein CLOSPO_03761 [Clostridium sporogenes ATCC
15579]
Length = 223
Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 33/94 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I + + G I + D+ GI+ + ++ GINI + R
Sbjct: 127 GGGNIVITSIDGQSMEFTGGNPTIVTHHKDVPGIISRISTMMYSEGINIGAMKVFRESKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A DG I V++++ I VK
Sbjct: 187 TTATMTFETDGEIPKKVIDEIKAIKDIENVKIIN 220
>gi|257899613|ref|ZP_05679266.1| L-serine dehydratase [Enterococcus faecium Com15]
gi|257837525|gb|EEV62599.1| L-serine dehydratase [Enterococcus faecium Com15]
Length = 222
Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 37/93 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G + +V+ D+ G++ V IL E NI + R
Sbjct: 129 GGGNIQISELNGFKISLSMGTPTLIVVHQDVPGMIAKVTGILSETNTNIGTMTVTRESKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E AI + +D + + +L I V F
Sbjct: 189 ESAIMIIEVDNPQVEETVRRLKHLPNIDSVNYF 221
>gi|20093737|ref|NP_613584.1| D-3-phosphoglycerate dehydrogenase [Methanopyrus kandleri AV19]
gi|19886634|gb|AAM01514.1| Predicted dehydrogenase related to phosphoglycerate dehydrogenase
[Methanopyrus kandleri AV19]
Length = 522
Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 37/93 (39%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + + + + + + D G++ VG ILGE+ +N+A +GR +
Sbjct: 429 EDRVYLTSVNGYEVRFKLSGPTLFVWHVDRPGVIGEVGIILGEHRVNVAAMEVGRRERGG 488
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
AI + +D L + +R V+
Sbjct: 489 EAIMVIRMDEEPPEECLRAIDEVEPVRRVELVR 521
>gi|73662854|ref|YP_301635.1| putative L-serine dehydratase beta subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|72495369|dbj|BAE18690.1| putative L-serine dehydratase beta subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 221
Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 38/90 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK + I N + + + + D G + V NILG+ IN+ + R +
Sbjct: 126 GGGKIEVVAINGFNIAISGNYPALLVFHKDTFGTIGRVANILGDSSINVGSMQVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ +D ++ + +EK+ + V
Sbjct: 186 DQALMTCELDDAVNDETIEKIKNVDGVVTV 215
>gi|20808958|ref|NP_624129.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacter
tengcongensis MB4]
gi|20517622|gb|AAM25733.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Thermoanaerobacter tengcongensis MB4]
Length = 533
Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 45/93 (48%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R ++ + + M+ + N D+ G++ +GN+LG++GINI+ + +++
Sbjct: 438 GEELRIVEYMGHKVNFEPTEYMLFVKNKDVPGVIGHIGNVLGDFGINISTMQVSPNKNDG 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D I +E L+ +I K +
Sbjct: 498 TALMLVSTDKEIPEEAVESLNKLNSIIKAKAVK 530
>gi|55980708|ref|YP_144005.1| L-serine dehydratase subunit beta [Thermus thermophilus HB8]
gi|55772121|dbj|BAD70562.1| L-serine dehydratase, beta subunit [Thermus thermophilus HB8]
Length = 220
Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 36/93 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G R + + + I N D G+V V IL + +NIA+ + R +
Sbjct: 123 GGGLVRVFDVDGFEVRITGSAPTLVIKNVDTPGVVARVARILADDEVNIAYLTVSRKKRG 182
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ + +D + L L I +V+Q
Sbjct: 183 GEAMMSIEVDRPLSEVPLRYLEHLSYILWVRQI 215
>gi|189219266|ref|YP_001939907.1| D-3-phosphoglycerate dehydrogenase [Methylacidiphilum infernorum
V4]
gi|189186124|gb|ACD83309.1| Phosphoglycerate dehydrogenase and ACT domains [Methylacidiphilum
infernorum V4]
Length = 531
Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 46/96 (47%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F R +++ + + +++ + N D GIV VG ILGE+ INIA L R+++
Sbjct: 436 FYGRSHRLVQLNFNPIEASMEGILLLLENKDRPGIVGKVGTILGEHSINIAAMSLARAKA 495
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
E AIS L +D +L K+ I V+
Sbjct: 496 GEKAISILNLDNIPSPDILVKIRNIEDIYNVQLISL 531
>gi|46198695|ref|YP_004362.1| L-serine dehydratase [Thermus thermophilus HB27]
gi|46196318|gb|AAS80735.1| L-serine dehydratase [Thermus thermophilus HB27]
Length = 220
Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 36/93 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G R + + + I N D G+V V IL + +NIA+ + R +
Sbjct: 123 GGGLVRVFDVDGFEVRITGSAPTLVIKNVDTPGVVARVARILADDEVNIAYLTVSRKKRG 182
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ + +D + L L I +V+Q
Sbjct: 183 GEAMMSIEVDRPLSEVPLRYLEHLSYILWVRQI 215
>gi|73668955|ref|YP_304970.1| D-3-phosphoglycerate dehydrogenase [Methanosarcina barkeri str.
Fusaro]
gi|72396117|gb|AAZ70390.1| D-3-phosphoglycerate dehydrogenase [Methanosarcina barkeri str.
Fusaro]
Length = 523
Score = 94.0 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 39/94 (41%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
P+ + + + D+ MI + + ++ +LG+ INI+ +GRS+
Sbjct: 430 GDDPKIVAVDDDRVDIFPAGRMIFAKHINRPNVIGPCCMVLGKNNINISGMQVGRSEIGG 489
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ L ID + + +LE++ I K
Sbjct: 490 VTMMVLNIDSEVSDPILEEVRKVDGILDAKLVTL 523
>gi|167037392|ref|YP_001664970.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320115806|ref|YP_004185965.1| L-serine dehydratase, iron-sulfur-dependent subunit beta
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166856226|gb|ABY94634.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319928897|gb|ADV79582.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 222
Score = 94.0 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 31/94 (32%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I I + + + D GIV V I +Y INIA + R
Sbjct: 127 GGGNVLLKEINGIEVEFTGEYETLITNHIDRPGIVANVTKIFADYKINIAFMRVYRHSKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ AI + D I + E + I
Sbjct: 187 DKAIMVIESDQKIPDVAKETIKNIDGILNAIIIN 220
>gi|322386439|ref|ZP_08060068.1| L-serine ammonia-lyase beta subunit [Streptococcus cristatus ATCC
51100]
gi|321269525|gb|EFX52456.1| L-serine ammonia-lyase beta subunit [Streptococcus cristatus ATCC
51100]
Length = 247
Score = 94.0 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I IV+ D+ G++ V L Y INIA + R ++
Sbjct: 154 GGGNIQVTELNGFSVSLSMNTPTIIIVHQDVPGMIAHVTEALSRYNINIAQMTVTREKAG 213
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D +E++ + V F+
Sbjct: 214 EKAIMIIEVDSRSCEEAIEEIRKIPHLHNVNFFK 247
>gi|194704786|gb|ACF86477.1| unknown [Zea mays]
Length = 624
Score = 94.0 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 38/93 (40%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G P + DV + +I D G++ VGNILG+ +NI +GR+ +
Sbjct: 532 GVPHLTLVGPYEVDVSLEGNLILCRQIDQPGMIGKVGNILGDTNVNINFMSVGRTFRGKQ 591
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI + +D LEK+ I E
Sbjct: 592 AIMAIGVDEEPDKDTLEKIGAIPAIEEFVFLEL 624
>gi|323486915|ref|ZP_08092231.1| hypothetical protein HMPREF9474_03982 [Clostridium symbiosum
WAL-14163]
gi|323691963|ref|ZP_08106212.1| L-serine dehydratase [Clostridium symbiosum WAL-14673]
gi|323399778|gb|EGA92160.1| hypothetical protein HMPREF9474_03982 [Clostridium symbiosum
WAL-14163]
gi|323503972|gb|EGB19785.1| L-serine dehydratase [Clostridium symbiosum WAL-14673]
Length = 218
Score = 94.0 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 37/95 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ K+ + +V R ++ I N D G V V +++ +NIA L RS+
Sbjct: 124 GGGRIMINKLDGVEINVTGERPVLIIHNIDKPGYVSEVTSLMASGSVNIATMTLHRSKRG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ + D +I + L I V
Sbjct: 184 GDAVMVIETDQNIPVEAVRHLEAVKGIFKVTCLNL 218
>gi|313682014|ref|YP_004059752.1| d-3-phosphoglycerate dehydrogenase [Sulfuricurvum kujiense DSM
16994]
gi|313154874|gb|ADR33552.1| D-3-phosphoglycerate dehydrogenase [Sulfuricurvum kujiense DSM
16994]
Length = 529
Score = 94.0 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F+D R + I DV+ MI N D+ G++ VG +L + +NIA F LGR+
Sbjct: 435 FNDDVQRIVDINGFGVDVEPKGNMILFKNTDVPGVIGQVGTLLAAHEVNIADFRLGRN-K 493
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D ++ + L++LS V
Sbjct: 494 SSEALAVIIVDSAVNDKTLKELSNLNACISVSYARI 529
>gi|323704756|ref|ZP_08116333.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323535682|gb|EGB25456.1| D-3-phosphoglycerate dehydrogenase [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 533
Score = 94.0 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 45/93 (48%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R ++ + + M+ + N D+ G++ +GN+LG++GINI+ H+ +++
Sbjct: 438 GDEIRIVEYLGHRVNFEPTEYMLFVKNKDVPGVIGHIGNVLGDFGINISSMHVSPNKNDG 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D I +E L+ +I K
Sbjct: 498 TALMIVNTDREIPIEAVESLNKLNSILRAKAVR 530
>gi|95928509|ref|ZP_01311256.1| D-3-phosphoglycerate dehydrogenase [Desulfuromonas acetoxidans DSM
684]
gi|95135299|gb|EAT16951.1| D-3-phosphoglycerate dehydrogenase [Desulfuromonas acetoxidans DSM
684]
Length = 528
Score = 94.0 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 50/97 (51%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F++ + R I + + + ++ + N D G++ +G +L E IN+A +L R +
Sbjct: 431 IFNNRECRIIGVDDYAIETIPSGHLLVVRNLDRPGVIALLGRLLAEAEINVAMMNLSRQK 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
ST A+S + +D I V+E+L + +I Q +
Sbjct: 491 STGDAMSLVTVDHKIPEQVMEELRRHDSILSAVQIDL 527
>gi|160940410|ref|ZP_02087755.1| hypothetical protein CLOBOL_05300 [Clostridium bolteae ATCC
BAA-613]
gi|158436990|gb|EDP14757.1| hypothetical protein CLOBOL_05300 [Clostridium bolteae ATCC
BAA-613]
Length = 222
Score = 94.0 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 39/94 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R +KI +++ D + +++ D G+V + L + +NIA L R +
Sbjct: 128 GGGKVRIVKINQVDVDFTGEYSSLIVIHQDKPGVVAHISKCLSDCNVNIAFMKLFREEKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + D + + + ++ N + +
Sbjct: 188 AQAYCIVESDERLPLEITDWINSNPHVYHTMLVQ 221
>gi|227552588|ref|ZP_03982637.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium TX1330]
gi|257888183|ref|ZP_05667836.1| L-serine dehydratase [Enterococcus faecium 1,141,733]
gi|257896926|ref|ZP_05676579.1| L-serine dehydratase [Enterococcus faecium Com12]
gi|293379131|ref|ZP_06625282.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium PC4.1]
gi|227178214|gb|EEI59186.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium TX1330]
gi|257824237|gb|EEV51169.1| L-serine dehydratase [Enterococcus faecium 1,141,733]
gi|257833491|gb|EEV59912.1| L-serine dehydratase [Enterococcus faecium Com12]
gi|292642272|gb|EFF60431.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium PC4.1]
Length = 222
Score = 94.0 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 37/93 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G + +V+ D+ G++ V IL E NI + R
Sbjct: 129 GGGNIQISELNGFKISLSMGTPTLIVVHQDVPGMIAKVTGILSETNTNIGTMTVTRESKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E AI + +D + + +L I V F
Sbjct: 189 ESAIMIIEVDNPQVEETVRRLKHLPNIDSVNYF 221
>gi|119963300|ref|YP_948230.1| D-3-phosphoglycerate dehydrogenase [Arthrobacter aurescens TC1]
gi|119950159|gb|ABM09070.1| D-3-phosphoglycerate dehydrogenase [Arthrobacter aurescens TC1]
Length = 539
Score = 94.0 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 42/91 (46%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + + ++ I ++ + AD G++ +G+ILG INI + R ++
Sbjct: 448 KLVGVNGYDVEIPISEHLVVVAYADRPGVIGTIGHILGMNNINIGGMQVARQTEGGQVLA 507
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
L ID S+ VLE + + V++ +
Sbjct: 508 LLTIDSSVPQQVLEAIKAGIGAEMVREVDLE 538
>gi|163839793|ref|YP_001624198.1| D-3-phosphoglycerate dehydrogenase [Renibacterium salmoninarum ATCC
33209]
gi|162953269|gb|ABY22784.1| D-3-phosphoglycerate dehydrogenase [Renibacterium salmoninarum ATCC
33209]
Length = 530
Score = 94.0 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 44/91 (48%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + + ++ + +I +V D G+V VG ILGE GINIA + R+ +
Sbjct: 439 KLVGVNGYDVEIPMSEHLIVLVYQDRPGVVGTVGGILGEKGINIAGMQVSRADDGNQVLC 498
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
L +D ++ VL+ + ++ ++ +
Sbjct: 499 LLTVDSAVPQDVLDSVRDSIDASTAREVDLE 529
>gi|220931993|ref|YP_002508901.1| D-3-phosphoglycerate dehydrogenase [Halothermothrix orenii H 168]
gi|219993303|gb|ACL69906.1| D-3-phosphoglycerate dehydrogenase [Halothermothrix orenii H 168]
Length = 527
Score = 94.0 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 44/90 (48%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R I+I + D+++ + I D G++ VG+ILG+ +NIA +GR AI
Sbjct: 438 RIIEINDFRIDLNLEGKFLVISYQDKPGVIGKVGSILGQDNVNIASMQVGRKSYGGQAIM 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ D + +EK++ N+ + + E
Sbjct: 498 IIQTDNKPSKATMEKINKNIELTDLTYLEI 527
>gi|262281664|ref|ZP_06059433.1| L-serine dehydratase [Streptococcus sp. 2_1_36FAA]
gi|262262118|gb|EEY80815.1| L-serine dehydratase [Streptococcus sp. 2_1_36FAA]
Length = 223
Score = 94.0 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I IV+ D+ G++ V + L Y INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTIIIVHQDVPGMIAHVTDALSRYNINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRSCEEAVEEIRNIPHLHNVNFFK 223
>gi|284032768|ref|YP_003382699.1| D-3-phosphoglycerate dehydrogenase [Kribbella flavida DSM 17836]
gi|283812061|gb|ADB33900.1| D-3-phosphoglycerate dehydrogenase [Kribbella flavida DSM 17836]
Length = 536
Score = 94.0 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 44/91 (48%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R ++I + +V++ + + D GIV VG ILGE INIA + R + A+
Sbjct: 445 RLVEIDGFDLEVELAEHLAFLSYEDRPGIVGQVGRILGESDINIAGMQVSRDRKGGKALV 504
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
L +D SI ++L+ ++ V + +
Sbjct: 505 ALSVDSSITPALLDDIATAVQADTARTVDLE 535
>gi|168183067|ref|ZP_02617731.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum Bf]
gi|237794499|ref|YP_002862051.1| L-serine dehydratase, iron-sulfur-dependent subunit beta
[Clostridium botulinum Ba4 str. 657]
gi|182673870|gb|EDT85831.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum Bf]
gi|229262226|gb|ACQ53259.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum Ba4 str. 657]
Length = 224
Score = 94.0 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 32/94 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I + + I + D+ GI+ + I+ GINI + R
Sbjct: 128 GGGNIVITSIDGQSMEFTGSNPTIVTHHKDVPGIISQISTIMYSEGINIGAMKVFREGKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A DG I +++++ I VK
Sbjct: 188 TTATMTFETDGEIPKKIIDEIKAIKDIENVKIIN 221
>gi|269121298|ref|YP_003309475.1| D-3-phosphoglycerate dehydrogenase [Sebaldella termitidis ATCC
33386]
gi|268615176|gb|ACZ09544.1| D-3-phosphoglycerate dehydrogenase [Sebaldella termitidis ATCC
33386]
Length = 528
Score = 94.0 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + R ++I + DV I M+ + N D+ G++ VG ILGE +NIA H+GR ++
Sbjct: 436 GNNEERIVEINDYPIDVVISENMLLVENNDVPGVIGNVGRILGEEQVNIATMHVGRKEN- 494
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI L +D + ++KL IR VK
Sbjct: 495 -SAIMLLTVDDVVEEKSIKKLEEFEQIRKVKYLNL 528
>gi|269926541|ref|YP_003323164.1| D-3-phosphoglycerate dehydrogenase [Thermobaculum terrenum ATCC
BAA-798]
gi|269790201|gb|ACZ42342.1| D-3-phosphoglycerate dehydrogenase [Thermobaculum terrenum ATCC
BAA-798]
Length = 524
Score = 94.0 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R I++ + D + + D G++ +G ILG + INI+ GR
Sbjct: 430 GEEQRVIRLDKFPVDFIPSGYFLFCPHIDRPGVIGAIGTILGNHNINISAAMSGRLAPRG 489
Query: 64 HAISFLCIDGSILNSVLEKLS-VNVTI 89
+ L +D + + V E++ I
Sbjct: 490 ETMLVLTLDEPVPDEVCEEIRQKVPGI 516
>gi|297202558|ref|ZP_06919955.1| phosphoglycerate dehydrogenase [Streptomyces sviceus ATCC 29083]
gi|197709915|gb|EDY53949.1| phosphoglycerate dehydrogenase [Streptomyces sviceus ATCC 29083]
Length = 529
Score = 94.0 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 44/90 (48%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + E + D+ + M+ + D G+V VG I GE GINIA + R+ + A++
Sbjct: 439 KIVAVGEYDVDLALADHMVVLKYEDRPGVVGTVGRIFGEAGINIAGMQVSRAIAGGEALA 498
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D ++ VL +++ + +
Sbjct: 499 VLTVDDTVPAGVLTEVAEEIGATSARAVNL 528
>gi|169825985|ref|YP_001696143.1| D-3-phosphoglycerate dehydrogenase [Lysinibacillus sphaericus
C3-41]
gi|168990473|gb|ACA38013.1| Phosphoglycerate dehydrogenase [Lysinibacillus sphaericus C3-41]
Length = 535
Score = 94.0 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 42/97 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + R +K+++ DV ++ I N D G + V L E INIA +GR+Q
Sbjct: 439 LLNGLGARIVKVEDYVVDVIPQGHLLYIKNTDKPGAIGRVATKLAEKDINIATMQVGRAQ 498
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L ID + N L ++ I VK
Sbjct: 499 VGGTAVMMLTIDNVVTNEDLAFVAQLENIDEVKAINL 535
>gi|311898491|dbj|BAJ30899.1| putative D-3-phosphoglycerate dehydrogenase [Kitasatospora setae
KM-6054]
Length = 528
Score = 94.0 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + + DV + M D G+V +G ILG+ GINIA + R + A++
Sbjct: 440 KIVGVDGFDVDVALTDHMAFFHYEDRPGVVGTLGRILGDAGINIAGMQVARD--GDSALA 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ +D + VL +++ + RF +
Sbjct: 498 SITVDSEVSQEVLAEIAAAIGARFARSVNL 527
>gi|293335763|ref|NP_001170081.1| hypothetical protein LOC100383999 [Zea mays]
gi|224033345|gb|ACN35748.1| unknown [Zea mays]
Length = 519
Score = 93.6 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 38/93 (40%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G P + DV + +I D G++ VGNILG+ +NI +GR+ +
Sbjct: 427 GVPHLTLVGPYEVDVSLEGNLILCRQIDQPGMIGKVGNILGDTNVNINFMSVGRTFRGKQ 486
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI + +D LEK+ I E
Sbjct: 487 AIMAIGVDEEPDKDTLEKIGAIPAIEEFVFLEL 519
>gi|199597545|ref|ZP_03210974.1| L-serine deaminase [Lactobacillus rhamnosus HN001]
gi|199591568|gb|EDY99645.1| L-serine deaminase [Lactobacillus rhamnosus HN001]
Length = 221
Score = 93.6 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + +I + +G+ ++ D+ G++ V I + GINI + R+
Sbjct: 129 GGGNIQITEINGFKISLSMGQPTYITIHDDVPGMIAQVTKIFSDAGINIGTMTVTRTAKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + D + +L KL + +R V FE
Sbjct: 189 EQAIMIIETD-DYHDDILAKLKLLPHMRNVTYFE 221
>gi|312194898|ref|YP_004014959.1| D-3-phosphoglycerate dehydrogenase [Frankia sp. EuI1c]
gi|311226234|gb|ADP79089.1| D-3-phosphoglycerate dehydrogenase [Frankia sp. EuI1c]
Length = 527
Score = 93.6 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 38/89 (42%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ I D+ + D GIV VG +LG+ INIA+ + R A+
Sbjct: 437 KITAIDGFEVDLRPEAHLAFFRYEDRPGIVGAVGELLGDAHINIANAQVSRLAVGGPALM 496
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
L +D ++ +L++++ + + +
Sbjct: 497 SLSLDDAVPADILQEIAKIIGAPYARAVS 525
>gi|229552010|ref|ZP_04440735.1| L-serine ammonia-lyase [Lactobacillus rhamnosus LMS2-1]
gi|258539425|ref|YP_003173924.1| L-serine dehydratase, iron-sulfur-dependent, subunit beta
[Lactobacillus rhamnosus Lc 705]
gi|229314587|gb|EEN80560.1| L-serine ammonia-lyase [Lactobacillus rhamnosus LMS2-1]
gi|257151101|emb|CAR90073.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Lactobacillus rhamnosus Lc 705]
Length = 221
Score = 93.6 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + +I + +G+ ++ D+ G++ V I + GINI + R+
Sbjct: 129 GGGNIQITEINGFKISLSMGQPTYITIHDDVPGMIAQVTKIFSDAGINIGTMTVTRTAKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + D + +L KL + +R V FE
Sbjct: 189 EQAIMIIETD-DYHDDILAKLKLLPHMRNVTYFE 221
>gi|242081631|ref|XP_002445584.1| hypothetical protein SORBIDRAFT_07g021980 [Sorghum bicolor]
gi|241941934|gb|EES15079.1| hypothetical protein SORBIDRAFT_07g021980 [Sorghum bicolor]
Length = 619
Score = 93.6 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 38/93 (40%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G P + DV + +I D G++ VGNILG+ +NI+ +GR+ +
Sbjct: 527 GVPHLTLVGPYEVDVSLEGNLILCRQIDQPGMIGKVGNILGQRNVNISFMSVGRTFRGKQ 586
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI + +D LE + I E
Sbjct: 587 AIMAIGVDEEPDKETLENIGAIPAIEEFVFLEL 619
>gi|15893961|ref|NP_347310.1| L-serine dehydratase, beta chain [Clostridium acetobutylicum ATCC
824]
gi|15023549|gb|AAK78650.1|AE007582_12 L-serine dehydratase, beta chain [Clostridium acetobutylicum ATCC
824]
gi|325508088|gb|ADZ19724.1| L-serine dehydratase, beta chain [Clostridium acetobutylicum EA
2018]
Length = 227
Score = 93.6 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 38/94 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + I+I + + + + + D+ G++ + ++ E INIA + RS
Sbjct: 128 GGGNIKIIEINGSSVEFTGAYPTLIVSHKDVPGMISKITTMIYENNINIAFLKVYRSSRG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + D I +++K+ ++ V
Sbjct: 188 FAAKMIVETDTVIDKQIIDKMKQIENLKSVIVIN 221
>gi|188587443|ref|YP_001918988.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|179352130|gb|ACB86400.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Natranaerobius thermophilus JW/NM-WN-LF]
Length = 221
Score = 93.6 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 39/94 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + N + + + D G+V + L + INIA+ + R++
Sbjct: 126 GGGLIQISQVDDFNVKLSGQYHALITKHLDRPGLVFRITRYLSDQEINIAYMQVSRTRKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A L D I S+ + L+ + I + +
Sbjct: 186 DTASLILETDDPISESIKDNLTQDDDIEQARIIQ 219
>gi|289578174|ref|YP_003476801.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter italicus Ab9]
gi|297544454|ref|YP_003676756.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|289527887|gb|ADD02239.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter italicus Ab9]
gi|296842229|gb|ADH60745.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 222
Score = 93.6 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 33/94 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I I ++ + + D GI+ V I +Y INIA + R
Sbjct: 127 GGGNVLLKEINGIEVEITGEYQTLITNHIDRPGIIANVTKIFADYKINIAFMRVYRHSKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + D I ++ E + I
Sbjct: 187 EKAIMVVESDQKIPDAAKETIKNIDGILNAIIIN 220
>gi|299537582|ref|ZP_07050875.1| D-3-phosphoglycerate dehydrogenase [Lysinibacillus fusiformis ZC1]
gi|298726951|gb|EFI67533.1| D-3-phosphoglycerate dehydrogenase [Lysinibacillus fusiformis ZC1]
Length = 537
Score = 93.6 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 41/97 (42%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + R +K+++ DV ++ I N D G + V L E INIA +GR+Q
Sbjct: 441 LLNGLGARIVKVEDYVVDVIPQGHLLYIKNTDKPGAIGRVATKLAEKEINIATMQVGRAQ 500
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + L ++ I VK
Sbjct: 501 VGGTAVMMLTVDNVVTEEDLVFVAQLENIDEVKAINL 537
>gi|324989556|gb|EGC21502.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis SK353]
gi|325686454|gb|EGD28483.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis SK72]
Length = 223
Score = 93.6 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I IV+ D+ G++ V L Y INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTIIIVHQDVPGMIAHVTEALSRYNINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D ++++ + V F+
Sbjct: 190 EKAIMIIEVDSRSCEEAIDEIRNIPHLHNVNFFK 223
>gi|218461199|ref|ZP_03501290.1| D-3-phosphoglycerate dehydrogenase [Rhizobium etli Kim 5]
Length = 463
Score = 93.6 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 37/71 (52%), Positives = 49/71 (69%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G MI I N D+ G++ F+G LG G+NIA+F LGR +
Sbjct: 393 VFSDGKPRFIQIKGINLDADVGSHMIYITNTDVPGMIGFIGTTLGGAGVNIANFQLGRDK 452
Query: 61 STEHAISFLCI 71
AI+ L +
Sbjct: 453 QGGDAIALLYV 463
>gi|21223871|ref|NP_629650.1| D-3-phosphoglycerate dehydrogenase [Streptomyces coelicolor A3(2)]
gi|256785031|ref|ZP_05523462.1| D-3-phosphoglycerate dehydrogenase [Streptomyces lividans TK24]
gi|289768924|ref|ZP_06528302.1| phosphoglycerate dehydrogenase [Streptomyces lividans TK24]
gi|4467266|emb|CAB37591.1| probable D-3-phosphoglycerate dehydrogenase [Streptomyces
coelicolor A3(2)]
gi|289699123|gb|EFD66552.1| phosphoglycerate dehydrogenase [Streptomyces lividans TK24]
Length = 529
Score = 93.6 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 45/90 (50%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I E + D+ + M+ + D G+V VG I+GE G+NIA + R+ A++
Sbjct: 439 KIVAIGEYDVDLALADHMVVLRYEDRPGVVGTVGRIIGEAGLNIAGMQVARATVGGEALA 498
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D ++ + VL +++ + +
Sbjct: 499 VLTVDDTVPSGVLAEVAAEIGATSARSVNL 528
>gi|328945152|gb|EGG39307.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis
SK1087]
Length = 223
Score = 93.6 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I IV+ D+ G++ V L Y INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTIIIVHQDVPGMIAHVTEALSRYNINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D ++++ + V F+
Sbjct: 190 EKAIMIIEVDSRSCEEAIDEIRNIPHLHNVNFFK 223
>gi|323350806|ref|ZP_08086465.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis VMC66]
gi|322122980|gb|EFX94683.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis VMC66]
Length = 234
Score = 93.6 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I IV+ D+ G++ V L Y INIA ++ R ++
Sbjct: 141 GGGNIQVTELNGFSVSLSMNTPTIIIVHQDVPGMIAHVTEALSRYNINIAQMNVTREKAG 200
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D ++++ + V F+
Sbjct: 201 EKAIMIIEVDSRSCEEAIDEIRNIPHLHNVNFFK 234
>gi|293571548|ref|ZP_06682570.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium E980]
gi|291608354|gb|EFF37654.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecium E980]
Length = 222
Score = 93.6 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 37/93 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G + +V+ D+ G++ V IL E NI + R
Sbjct: 129 GGGNIQISELNGFKISLSMGTPTLIVVHQDVPGMIAKVTGILSETNTNIGTMTVTRESKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E AI + +D + + +L I V F
Sbjct: 189 ESAIMIIEVDNPQIEETVRRLKHLPNIDSVNYF 221
>gi|153852678|ref|ZP_01994115.1| hypothetical protein DORLON_00097 [Dorea longicatena DSM 13814]
gi|149754320|gb|EDM64251.1| hypothetical protein DORLON_00097 [Dorea longicatena DSM 13814]
Length = 223
Score = 93.6 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 37/93 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ K+ I+ + + I N D G ++ V L + IN+A + R +
Sbjct: 125 GGGRICVCKLDGIDVNFSGESCTLIIRNVDEPGRIMEVAAALSKAEINVATMQVFRDKRG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ + D I S +++L I VK
Sbjct: 185 GTAVMVVETDQVIPQSAIDELESKPGIIRVKFL 217
>gi|28211606|ref|NP_782550.1| L-serine dehydratase beta subunit [Clostridium tetani E88]
gi|28204048|gb|AAO36487.1| L-serine dehydratase beta subunit [Clostridium tetani E88]
Length = 228
Score = 93.6 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 31/94 (32%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I + + + D G++ + I+ + +NI L R+
Sbjct: 128 GGGNIIIFDIDGQEVEFKGDYPTLMTKHKDTPGVISKISTIMYKDNLNIGTMKLYRNSKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A L D I + +EKL I +K
Sbjct: 188 SMATMALETDNVIPQATIEKLKKIPEIHSIKIIN 221
>gi|225458719|ref|XP_002283022.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 605
Score = 93.6 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 43/94 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DGKP K+ DV + +I + + D GI+ VG+ILGE +N++ +GR+ +
Sbjct: 512 DGKPHLTKVGSFGVDVSLEGSLILLRHVDQPGIIGKVGSILGEENVNVSFMSVGRTAPRK 571
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ + +D L ++ I E
Sbjct: 572 QAVMTIGVDEEPSREALTRIGNLPAIEEFVFLEL 605
>gi|299821765|ref|ZP_07053653.1| L-serine ammonia-lyase [Listeria grayi DSM 20601]
gi|299817430|gb|EFI84666.1| L-serine ammonia-lyase [Listeria grayi DSM 20601]
Length = 220
Score = 93.6 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ E + I I++ D G + V I+ + INI + R
Sbjct: 126 GGGKVEIVRLNEFELEFTGTAPAIVILHQDKYGAIAAVSRIIADNQINIGQMKVSRKVKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ + +D + VL++++ I V
Sbjct: 186 DEALMVIEVDQTASKEVLDQIAALAGIYQVASIII 220
>gi|314933875|ref|ZP_07841240.1| phosphoglycerate dehydrogenase [Staphylococcus caprae C87]
gi|313654025|gb|EFS17782.1| phosphoglycerate dehydrogenase [Staphylococcus caprae C87]
Length = 531
Score = 93.2 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 40/92 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V + PR ++I + + D I + D GIV GN+LG +GINIA LGR+
Sbjct: 433 VLAGFGPRIVRINDFSLDFKPNEYQIVTCHKDKPGIVGQTGNLLGSHGINIASMTLGRNN 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID V+ L +
Sbjct: 493 EGGDALMILSIDQQASLDVINILRETGGFNRI 524
>gi|114565585|ref|YP_752739.1| D-3-phosphoglycerate dehydrogenase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114336520|gb|ABI67368.1| D-3-phosphoglycerate dehydrogenase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 530
Score = 93.2 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 38/84 (45%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
P ++I + ++ ++ + N D ++ LG+ GINIA + R E AI
Sbjct: 439 PLLVEINGYETESNLEGYLLVVENEDRPRVIGPFATALGDEGINIAGMKVARKTKGEKAI 498
Query: 67 SFLCIDGSILNSVLEKLSVNVTIR 90
+ +D + VLEKLS I
Sbjct: 499 MIINVDNKVEEPVLEKLSQLDGIV 522
>gi|226313296|ref|YP_002773190.1| L-serine dehydratase beta chain [Brevibacillus brevis NBRC 100599]
gi|226096244|dbj|BAH44686.1| probable L-serine dehydratase beta chain [Brevibacillus brevis NBRC
100599]
Length = 221
Score = 93.2 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 40/96 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ +F + + +++ D G++ V +L ++ IN+ + R
Sbjct: 126 GGGKIEVLEVNGFSFQLGFDTPTLLVLHEDRFGMIAAVAKVLTQHNINVGFMEVSRHTRG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A+ + D +I VLE++ I V N
Sbjct: 186 SRALMAIETDSTISPEVLEEIRQIPHIFDVSLLALN 221
>gi|310778370|ref|YP_003966703.1| D-3-phosphoglycerate dehydrogenase [Ilyobacter polytropus DSM 2926]
gi|309747693|gb|ADO82355.1| D-3-phosphoglycerate dehydrogenase [Ilyobacter polytropus DSM 2926]
Length = 530
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 45/88 (51%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++++ +F+V M+ + N D+ G++ VG + GE GINIA +GR + AI
Sbjct: 441 KLVELEGYDFEVKPTEYMLFVKNKDVPGVIGHVGTLAGEKGINIATMQVGRKTKGDTAIM 500
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQF 95
L ID + ++ LE+ + K
Sbjct: 501 ILTIDEEVSSTTLEEFKKMDNVVTAKSV 528
>gi|157151322|ref|YP_001449342.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus gordonii str. Challis substr. CH1]
gi|157076116|gb|ABV10799.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus gordonii str. Challis substr. CH1]
Length = 223
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I IV+ D+ G++ V L Y INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTIIIVHQDVPGMIAHVTEALSRYNINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D ++++ + V F+
Sbjct: 190 EKAIMIIEVDSRSCEEAVKEIRNIPHLHNVNFFK 223
>gi|125719135|ref|YP_001036268.1| L-serine dehydratase beta subunit [Streptococcus sanguinis SK36]
gi|125499052|gb|ABN45718.1| L-serine dehydratase beta subunit [Streptococcus sanguinis SK36]
gi|325695738|gb|EGD37637.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis SK150]
gi|325698054|gb|EGD39935.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis SK160]
Length = 223
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I IV+ D+ G++ V L Y INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTIIIVHQDVPGMIAHVTEALSRYNINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D ++++ + V F+
Sbjct: 190 EKAIMIIEVDSRSCEEAIDEIRNIPHLHNVNFFK 223
>gi|322412888|gb|EFY03796.1| putative L-serine dehydratase beta subunit [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
Length = 223
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I V+ DI G++ V +IL + INIA ++ R +
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTIITVHQDIPGMIAKVTDILSSHNINIATMNVTRESAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E AI + +D ++ ++ I V
Sbjct: 190 EKAIMIIEVDCRECQETIKSIAKIPNIHNV 219
>gi|16803853|ref|NP_465338.1| hypothetical protein lmo1813 [Listeria monocytogenes EGD-e]
gi|254829192|ref|ZP_05233879.1| L-serine dehydratase [Listeria monocytogenes FSL N3-165]
gi|254831585|ref|ZP_05236240.1| hypothetical protein Lmon1_09538 [Listeria monocytogenes 10403S]
gi|16411267|emb|CAC99891.1| lmo1813 [Listeria monocytogenes EGD-e]
gi|258601602|gb|EEW14927.1| L-serine dehydratase [Listeria monocytogenes FSL N3-165]
Length = 220
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ E + I I++ D G + V +++ ++ INI + R
Sbjct: 126 GGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVSRKVKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D + +++ K++ I V
Sbjct: 186 DEALMVIEVDQQVEQALISKIAELSGIYQV 215
>gi|153937912|ref|YP_001390563.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum F str. Langeland]
gi|170754410|ref|YP_001780838.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum B1 str. Okra]
gi|152933808|gb|ABS39306.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum F str. Langeland]
gi|169119622|gb|ACA43458.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum B1 str. Okra]
gi|295318644|gb|ADF99021.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum F str. 230613]
Length = 224
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 32/94 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I + + I + D+ GI+ + ++ GINI + R
Sbjct: 128 GGGNIVITSIDGQSMEFTGSNPTIVTHHKDVPGIISRISTMMYSEGINIGAMKVFREGKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A DG I V++++ I VK
Sbjct: 188 TTATMTFETDGEIPKKVIDEIKAIKDIENVKIIN 221
>gi|324991888|gb|EGC23811.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis SK405]
gi|324996222|gb|EGC28132.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis SK678]
gi|327458512|gb|EGF04862.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis SK1]
gi|327471586|gb|EGF17029.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis SK408]
gi|327490316|gb|EGF22103.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis
SK1058]
Length = 223
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I IV+ D+ G++ V L Y INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTIIIVHQDVPGMIAHVTEALSRYNINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D ++++ + V F+
Sbjct: 190 EKAIMIIEVDSRSCEEAIDEIRNIPHLHNVNFFK 223
>gi|189346493|ref|YP_001943022.1| D-3-phosphoglycerate dehydrogenase [Chlorobium limicola DSM 245]
gi|189340640|gb|ACD90043.1| D-3-phosphoglycerate dehydrogenase [Chlorobium limicola DSM 245]
Length = 526
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 42/97 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF D R + I + + +I N D G++ V L ++ +N+A+ L R +
Sbjct: 430 VFGDKAIRIVMIDQFLVEFKPEGNIIIYNNIDKPGVIANVTQHLLQHNLNVAYVALSRDE 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ + +D + S+L+++ + +
Sbjct: 490 DKLLAMTAIVVDSKVDPSLLDEIKLVDGVSEAAVVSI 526
>gi|29829272|ref|NP_823906.1| D-3-phosphoglycerate dehydrogenase [Streptomyces avermitilis
MA-4680]
gi|29606379|dbj|BAC70441.1| putative D-3-phosphoglycerate dehydrogenase [Streptomyces
avermitilis MA-4680]
Length = 529
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 45/92 (48%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ + + E + D+ + M+ + D G+V +G ILG GINIA + R+ + A
Sbjct: 437 HQKIVAVGEYDVDLALADHMVVLKYTDRPGVVGTLGRILGGAGINIAGMQVSRAVAGGEA 496
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
++ L +D ++ +VL +L+ + +
Sbjct: 497 LAVLTVDDTVSQNVLTELAEEIGATSARSVNL 528
>gi|271969249|ref|YP_003343445.1| D-3-phosphoglycerate dehydrogenase [Streptosporangium roseum DSM
43021]
gi|270512424|gb|ACZ90702.1| D-3-phosphoglycerate dehydrogenase [Streptosporangium roseum DSM
43021]
Length = 529
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 40/90 (44%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ +++ +++ + D GIV VG ILG++GINIA + R A+
Sbjct: 438 KIVEVNGYQMEIEPTDHLSFFTYTDRPGIVGVVGRILGDHGINIASMQVARDVKGGKALI 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D I V++++ + + +
Sbjct: 498 ALTVDTGIPADVIDQIGAEIGADSGRSVDL 527
>gi|296270774|ref|YP_003653406.1| D-3-phosphoglycerate dehydrogenase [Thermobispora bispora DSM
43833]
gi|296093561|gb|ADG89513.1| D-3-phosphoglycerate dehydrogenase [Thermobispora bispora DSM
43833]
Length = 529
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ +++ +++ + D GIV VG ILGE+GINIA + R+ A+
Sbjct: 438 KIVEVNGFAMEIEPTDHLAFFTYIDRPGIVGVVGRILGEHGINIASMQVSRNVKGGKALI 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D +I + ++E++ + + +
Sbjct: 498 ALTVDSAIPSELVEEIVGEIGAESGRSVDL 527
>gi|170761438|ref|YP_001786605.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum A3 str. Loch Maree]
gi|169408427|gb|ACA56838.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum A3 str. Loch Maree]
Length = 224
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 32/94 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I + + I + D+ GI+ + ++ GINI + R
Sbjct: 128 GGGNIVITSIDGQSMEFTGSNPTIVTHHKDVPGIISQISTMMYSEGINIGAMKVFREGKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A DG I +++++ I VK
Sbjct: 188 TTATMTFETDGEIPKKIIDEIKAIKDIENVKIIN 221
>gi|223043512|ref|ZP_03613557.1| phosphoglycerate dehydrogenase [Staphylococcus capitis SK14]
gi|222443000|gb|EEE49100.1| phosphoglycerate dehydrogenase [Staphylococcus capitis SK14]
Length = 531
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 40/92 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V + PR ++I + + D I + D GIV GN+LG +GINIA LGR+
Sbjct: 433 VLAGFGPRIVRINDFSLDFKPNEYQIVTCHKDKPGIVGQTGNLLGSHGINIASMTLGRNN 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID V+ L +
Sbjct: 493 EGGDALMILSIDQQASLDVINILRETGGFNRI 524
>gi|78777073|ref|YP_393388.1| D-3-phosphoglycerate dehydrogenase [Sulfurimonas denitrificans DSM
1251]
gi|78497613|gb|ABB44153.1| D-3-phosphoglycerate dehydrogenase [Sulfurimonas denitrificans DSM
1251]
Length = 529
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F D R + I + +V + MI + N D+ G++ +G+ L ++ +NIA F L R+
Sbjct: 434 IFDDNVFRIVSIDGFDIEVALKGDMIILKNQDVPGVIGNIGSTLAKHNVNIADFSLARND 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
+ A++ + +D I + LE+L V+
Sbjct: 494 K-KQALAVILVDNVISDDTLEELLRIDACSSVQY 526
>gi|94984817|ref|YP_604181.1| D-3-phosphoglycerate dehydrogenase [Deinococcus geothermalis DSM
11300]
gi|94555098|gb|ABF45012.1| D-3-phosphoglycerate dehydrogenase [Deinococcus geothermalis DSM
11300]
Length = 542
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF PR ++++ ++ ++ N D G V + N+LG +GINIA LGR+Q
Sbjct: 447 VFGR-SPRLTRLRDYRVELAPEGFILIASNQDRPGAVAKLSNLLGTWGINIAGMALGRAQ 505
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ L +D + L+ + I
Sbjct: 506 KGGQALFTLTLDDGLTPEQLQAIRDLDVIDSAFLVR 541
>gi|302554336|ref|ZP_07306678.1| phosphoglycerate dehydrogenase [Streptomyces viridochromogenes DSM
40736]
gi|302471954|gb|EFL35047.1| phosphoglycerate dehydrogenase [Streptomyces viridochromogenes DSM
40736]
Length = 529
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 45/90 (50%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + E + D+ + M+ + D G+V VG ILGE GINIA + R+ + A++
Sbjct: 439 KIVAVGEYDVDLALADHMVVLRYEDRPGVVGTVGRILGEAGINIAGMQVSRAVAGGEALA 498
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D ++ VL +++ + +
Sbjct: 499 VLTVDDTVTPGVLAEVAAEIGATSSRSVNL 528
>gi|167998190|ref|XP_001751801.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696899|gb|EDQ83236.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 630
Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ N DV + +I D G++ VG+ILGE +NIA +GR+
Sbjct: 537 DGVPHLSKVGNFNVDVSLEGSIIFYRQVDQPGMIGKVGSILGEENVNIAFMSVGRTLRGL 596
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
AI + D + + ++KL+ I
Sbjct: 597 DAIVAIGTDEDLSKATIQKLADIPAI 622
>gi|34558837|gb|AAQ75181.1| D-3-phosphoglycerate dehydrogenase [Alvinella pompejana epibiont
7G3]
Length = 529
Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + R I+I D++ MI N D+ G++ VG I+ Y +NI+ F LGR
Sbjct: 434 IFGENTQRIIEINGYKLDLEPKGKMILFRNTDVPGVIGDVGRIIASYNVNISDFRLGRDS 493
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
++ A++ + +D ++ S+L++LS T V
Sbjct: 494 NS-QALAVVKVDDNVNKSLLQELSSLETCISVAYVVI 529
>gi|148379196|ref|YP_001253737.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum A str. ATCC 3502]
gi|153930867|ref|YP_001383573.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum A str. ATCC 19397]
gi|153936988|ref|YP_001387122.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum A str. Hall]
gi|168178634|ref|ZP_02613298.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum NCTC 2916]
gi|226948481|ref|YP_002803572.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum A2 str. Kyoto]
gi|148288680|emb|CAL82761.1| putative L-serine dehydratase, beta chain [Clostridium botulinum A
str. ATCC 3502]
gi|152926911|gb|ABS32411.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum A str. ATCC 19397]
gi|152932902|gb|ABS38401.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum A str. Hall]
gi|182671043|gb|EDT83017.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum NCTC 2916]
gi|226842598|gb|ACO85264.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum A2 str. Kyoto]
gi|322805534|emb|CBZ03099.1| L-serine dehydratase, beta subunit [Clostridium botulinum H04402
065]
Length = 224
Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 32/94 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I + + I + D+ GI+ + ++ GINI + R
Sbjct: 128 GGGNIVITSIDGQSMEFTGSNPTIVTHHKDVPGIISQISTMMYSEGINIGAMKVFREGKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A DG I +++++ I VK
Sbjct: 188 TTATMTFETDGEIPKKIIDEIKAIKDIENVKIIN 221
>gi|326501108|dbj|BAJ98785.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504920|dbj|BAK06751.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G P + DV + +I D G++ VGNILG+ +N++ +GR+ +
Sbjct: 524 GVPHLTVVGPYEVDVSLEGNLILCRQIDQPGMIGKVGNILGQRNVNVSFMSVGRTSRGKQ 583
Query: 65 AISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D LEK+ I
Sbjct: 584 AIMAIGVDEEPDKKTLEKIGAIPAI 608
>gi|228474509|ref|ZP_04059242.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus hominis SK119]
gi|228271538|gb|EEK12900.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus hominis SK119]
Length = 869
Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 40/92 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V R ++I + + D + D+ G+V G +LG++ INIA LGRS
Sbjct: 771 VIDGFGARIVRINDYSVDFKPNTYQFISYHKDLPGMVGLTGQLLGKHDINIASMSLGRSS 830
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID I V+++L +
Sbjct: 831 EGGQAMMILSIDQPITQQVIKELYEIGDFDNI 862
>gi|167768990|ref|ZP_02441043.1| hypothetical protein ANACOL_00311 [Anaerotruncus colihominis DSM
17241]
gi|167668630|gb|EDS12760.1| hypothetical protein ANACOL_00311 [Anaerotruncus colihominis DSM
17241]
Length = 219
Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 39/88 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G K+ + ++ + +++ D G + V LG YG+NI +F L R Q
Sbjct: 124 GGGSILITKVNGMAVEITGQYATLIVLHRDAPGTIAAVTECLGSYGVNICNFRLAREQKG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIR 90
A+ + DGSI ++ EK+ I
Sbjct: 184 GTAVMTIETDGSIDRTLNEKIRALPNII 211
>gi|317129247|ref|YP_004095529.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cellulosilyticus DSM 2522]
gi|315474195|gb|ADU30798.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cellulosilyticus DSM 2522]
Length = 220
Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 40/94 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + I +V+ D G + V +L ++ INI H + R +
Sbjct: 126 GGGKVEIKELNGFKLRLSGNHPAILVVHNDRFGAIASVSTLLAKHEINIGHMEVSRKEVG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A+ + ID ++ +L+++ + V +
Sbjct: 186 KEALMVIEIDQNVSEVILKEVETLDHVSKVTKIH 219
>gi|295110453|emb|CBL24406.1| L-serine ammonia-lyase [Ruminococcus obeum A2-162]
Length = 222
Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 40/95 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R +KI + D + + + D G+V ++ L + +NIA L R
Sbjct: 128 GGGKVRIVKINSVQVDFTGEYSAVIVTHQDKPGVVAYITKCLSDRNVNIAFMRLFRESKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
E A + + DG + + + + +N I V +
Sbjct: 188 EIAYTIVESDGHLPEDIDDTIRLNQNIHEVMIVQM 222
>gi|327463812|gb|EGF10128.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis
SK1057]
Length = 234
Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I IV+ D+ G++ V L Y INIA ++ R ++
Sbjct: 141 GGGNIQVTELNGFSVSLSMNTPTIIIVHQDVPGMIAHVTEALSRYNINIAQMNVTREKAG 200
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D +E++ + V F+
Sbjct: 201 EKAIMIIEVDSRSCEEAIEEIRNIPHLHNVNFFK 234
>gi|254383224|ref|ZP_04998577.1| D-3-phosphoglycerate dehydrogenase [Streptomyces sp. Mg1]
gi|194342122|gb|EDX23088.1| D-3-phosphoglycerate dehydrogenase [Streptomyces sp. Mg1]
Length = 529
Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 42/90 (46%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I E + D+ + MI + AD G+V VG LGE G+NIA + R++ A+
Sbjct: 439 KIVGIGEYDLDLALAEQMIVLRYADRPGVVGTVGRFLGEAGLNIAGMQVARAEEGGEALG 498
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D + VL ++ + +
Sbjct: 499 VLTVDAEVPAGVLADIAAEIGAVSARSVSL 528
>gi|22538279|ref|NP_689130.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus agalactiae 2603V/R]
gi|25012139|ref|NP_736534.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus agalactiae NEM316]
gi|76787626|ref|YP_330693.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus agalactiae A909]
gi|76798864|ref|ZP_00781073.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus agalactiae 18RS21]
gi|77406512|ref|ZP_00783565.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus agalactiae H36B]
gi|77408907|ref|ZP_00785632.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus agalactiae COH1]
gi|77412488|ref|ZP_00788789.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus agalactiae CJB111]
gi|77413218|ref|ZP_00789416.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus agalactiae 515]
gi|22535194|gb|AAN01003.1|AE014289_3 L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus agalactiae 2603V/R]
gi|24413683|emb|CAD47763.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562683|gb|ABA45267.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus agalactiae A909]
gi|76585787|gb|EAO62336.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus agalactiae 18RS21]
gi|77160758|gb|EAO71871.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus agalactiae 515]
gi|77161464|gb|EAO72474.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus agalactiae CJB111]
gi|77172498|gb|EAO75642.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus agalactiae COH1]
gi|77174884|gb|EAO77700.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus agalactiae H36B]
gi|319746157|gb|EFV98429.1| L-serine dehydratase [Streptococcus agalactiae ATCC 13813]
Length = 222
Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + + IV+ DI G++ V +IL ++ INIA ++ R +
Sbjct: 129 GGGNIQVTELNGFSVSLTMNTPTLIIVHQDIPGMIAKVTDILSDFNINIAQMNVTRESAG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E AI + +D ++K+ + V
Sbjct: 189 EKAIMIIEVDSRDCQQAVKKIEAIPHLHNV 218
>gi|154502479|ref|ZP_02039539.1| hypothetical protein RUMGNA_00292 [Ruminococcus gnavus ATCC 29149]
gi|153796875|gb|EDN79295.1| hypothetical protein RUMGNA_00292 [Ruminococcus gnavus ATCC 29149]
Length = 221
Score = 92.8 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 35/94 (37%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ ++ EI + + I N D G V V ++L +NIA L R +
Sbjct: 124 GGGRIMLNELDEITVNCTGACPTLIIRNEDSPGQVAEVTSVLYGKKVNIATLQLHRDKRG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+A+ + D + + L I V E
Sbjct: 184 GYAVMVIETDQPVEPDTIRDLERLNGISKVTYIE 217
>gi|154484276|ref|ZP_02026724.1| hypothetical protein EUBVEN_01988 [Eubacterium ventriosum ATCC
27560]
gi|149734753|gb|EDM50670.1| hypothetical protein EUBVEN_01988 [Eubacterium ventriosum ATCC
27560]
Length = 219
Score = 92.8 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 35/93 (37%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ +I I+ + + + N D G V V ++L +NIA L RS
Sbjct: 124 GGSRINIAQIDGIDTNFSGECPTLIVHNMDQPGHVSEVTSMLAYKSVNIATMQLYRSAKG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+A+ + D I +E L I V F
Sbjct: 184 GNAVMVVECDQQIPKEGIEWLKHVEGILKVTYF 216
>gi|283795274|ref|ZP_06344427.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium sp. M62/1]
gi|291076920|gb|EFE14284.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium sp. M62/1]
gi|295090162|emb|CBK76269.1| L-serine ammonia-lyase [Clostridium cf. saccharolyticum K10]
Length = 221
Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 32/94 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ K+ + + I N D G+V V IL +NIA L R +
Sbjct: 124 GGGRIMIDKLDDTEVHCTGSCPTLIIHNQDSPGMVSEVTGILSRKNVNIATLQLYRDKRG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D ++ + L I +
Sbjct: 184 GLAVMVIETDQTVPRETVSMLEKLEGIERIMYIR 217
>gi|224501385|ref|ZP_03669692.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
monocytogenes FSL R2-561]
Length = 223
Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ E + I I++ D G + V +++ ++ INI + R
Sbjct: 129 GGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVSRKVKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D + +++ K++ I V
Sbjct: 189 DEALMVIEVDQQVEQALISKIAELSGIYQV 218
>gi|32265634|ref|NP_859666.1| D-3-phosphoglycerate dehydrogenase [Helicobacter hepaticus ATCC
51449]
gi|32261682|gb|AAP76732.1| D-3-phosphoglycerate dehydrogenase [Helicobacter hepaticus ATCC
51449]
Length = 526
Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF D R I FD++ MI N D+ G++ VG+ILG + +NI+ F L R
Sbjct: 432 VFEDRHLRLTSINHFQFDIEPKGKMIFFKNTDVPGVIGLVGSILGNHQVNISDFRLARQN 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A++ + +D + N V+ +L +K
Sbjct: 492 K--EAMAVILVDSEVSNEVIGQLENIPACLSIKIVN 525
>gi|325689332|gb|EGD31338.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis SK115]
Length = 223
Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I IV+ D+ G++ V L Y INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTIIIVHQDVPGMIAHVTEALSRYNINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + ++ + V F+
Sbjct: 190 EKAIMIIEVDSRSCEEAINEIRNIPHLHNVNFFK 223
>gi|170781815|ref|YP_001710147.1| D-3-phosphoglycerate dehydrogenase [Clavibacter michiganensis
subsp. sepedonicus]
gi|169156383|emb|CAQ01531.1| D-3-phosphoglycerate dehydrogenase [Clavibacter michiganensis
subsp. sepedonicus]
Length = 529
Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I + +V R +I + D GIV G G+ +NIA + R ++ A+S
Sbjct: 438 KLVEIDGYDVEVPFSRHLIVMKYEDRPGIVAVYGKEFGDAEVNIAGMQIARQEAGGRALS 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D + + VLE + + +++ +
Sbjct: 498 VLSVDSPVPDGVLENVRRAIQTTSLREIDI 527
>gi|322373174|ref|ZP_08047710.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus sp. C150]
gi|321278216|gb|EFX55285.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus sp. C150]
Length = 223
Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 43/94 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ ++ + + IV+ D+ G++ V +IL YGINIA + R +
Sbjct: 130 GGGNIQVTELNGFAVNLKMNTPTLIIVHQDVPGMIALVTDILSRYGINIAQMTVTRENAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + ID + + +++ + V F
Sbjct: 190 EKAIMIIEIDSHQCDEAVTEIAKIPHLHNVNFFS 223
>gi|322383141|ref|ZP_08056963.1| L-serine dehydratase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321152684|gb|EFX45315.1| L-serine dehydratase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 263
Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 45/93 (48%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ + I +V+ D G + V N+L ++ INI H + R +
Sbjct: 169 GGGKIEIIELNGFELKLSGEHPAILVVHNDRYGAIASVTNVLTKHYINIGHMEVSRKEKG 228
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
++A+ + +D ++ + ++E++S I V +
Sbjct: 229 KNALMIIEMDQNLDDYIIEEISKLPNILQVTKI 261
>gi|258508211|ref|YP_003170962.1| L-serine dehydratase subunit beta [Lactobacillus rhamnosus GG]
gi|257148138|emb|CAR87111.1| L-serine dehydratase, iron-sulfur-dependent,beta subunit
[Lactobacillus rhamnosus GG]
gi|259649527|dbj|BAI41689.1| L-serine dehydratase beta subunit [Lactobacillus rhamnosus GG]
Length = 221
Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + +I + +G+ ++ D+ G++ V I + GINI + R+
Sbjct: 129 GGGNIQITEINGFKISLSMGQPTYITIHDDVPGMIAQVTKIFSDPGINIGTMTVTRTAKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + D + +L KL + +R V FE
Sbjct: 189 EQAIMIIETD-DYHDDILAKLKLLPHMRNVTYFE 221
>gi|237748547|ref|ZP_04579027.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229379909|gb|EEO30000.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 221
Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 32/95 (33%), Gaps = 1/95 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIV-NADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
G+ +I I + + D G V V L + INIA L R
Sbjct: 124 GGGRIIVSRIDGITSHFSGDENTLIVHAQHDRPGHVARVTTELAIHQINIATMQLHRHIK 183
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D +I ++EKL I V
Sbjct: 184 GGQAVMVIECDSTIPTELVEKLKQMEGIMKVTFLN 218
>gi|194336592|ref|YP_002018386.1| D-3-phosphoglycerate dehydrogenase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309069|gb|ACF43769.1| D-3-phosphoglycerate dehydrogenase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 526
Score = 92.4 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 43/97 (44%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + + R + I + + +I N D G++ V +L ++ +N+A+ L R +
Sbjct: 430 IFGEKEIRIVMIDQFLVEFKPEGNIIIYNNTDKPGVIANVTQLLLQHNLNVAYVALSRDE 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ + +DG + +L+++ +
Sbjct: 490 EKNMAMTAIVVDGEVTPVLLDEVRNVNGVDVANLVSL 526
>gi|221194378|ref|ZP_03567435.1| L-serine dehydratase TdcG [Atopobium rimae ATCC 49626]
gi|221185282|gb|EEE17672.1| L-serine dehydratase TdcG [Atopobium rimae ATCC 49626]
Length = 533
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 32/95 (33%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ R + + + I + + D G++ + +L + IN+A R+
Sbjct: 128 GGGRIRISGVNGAHVRMAGDMPTIFVSHHDTPGVLAALTAVLAQQHINVATMRTFRAARG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A + ID I L + + Q
Sbjct: 188 GVAYTIFEIDEEISERTLTLFRQAPHVIYATQVYI 222
>gi|294779902|ref|ZP_06745284.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis PC1.1]
gi|294453014|gb|EFG21434.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis PC1.1]
Length = 233
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 40/93 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G +V+ D+ G++ V NIL INI+ + R
Sbjct: 140 GGGNIQISELNGFKLSLSMGTPTFIVVHQDVPGMIAKVTNILSASDINISTMTVTRESKG 199
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E AI + +D + ++ +L+ I V F
Sbjct: 200 EKAIMIIEVDQAEGGDIVMQLAEIPHIYSVNYF 232
>gi|315639705|ref|ZP_07894844.1| L-serine ammonia-lyase beta subunit [Enterococcus italicus DSM
15952]
gi|315484482|gb|EFU74939.1| L-serine ammonia-lyase beta subunit [Enterococcus italicus DSM
15952]
Length = 235
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G IV+ D+ G++ V +L E +NI + R
Sbjct: 143 GGGNIQISEVNGFKLSLSLGTPTFIIVHQDVPGMIAKVSQLLSEATLNIGTMTVTRESKG 202
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E AI + +D + VLEK+ I
Sbjct: 203 EKAIMIIEVDERNSD-VLEKIRKLEHIYSA 231
>gi|94989482|ref|YP_597583.1| L-serinedehydratase beta subunit [Streptococcus pyogenes MGAS9429]
gi|94993369|ref|YP_601468.1| L-serine dehydratase beta subunit [Streptococcus pyogenes MGAS2096]
gi|94542990|gb|ABF33039.1| L-serinedehydratase beta subunit [Streptococcus pyogenes MGAS9429]
gi|94546877|gb|ABF36924.1| L-serine dehydratase beta subunit [Streptococcus pyogenes MGAS2096]
Length = 225
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I V+ DI G++ V +IL INIA ++ R +
Sbjct: 132 GGGNIQVTELNGFSVSLSMNTPTIVTVHKDIPGMIAKVTDILSSNNINIATMNVTRESAG 191
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E A + +D +++ I V
Sbjct: 192 EKATMIIEVDSRECQEAANQIAKIPHIYNV 221
>gi|148272280|ref|YP_001221841.1| D-3-phosphoglycerate dehydrogenase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147830210|emb|CAN01143.1| D-3-phosphoglycerate dehydrogenase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 529
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I + +V R +I + D GIV G G+ +NIA + R ++ A+S
Sbjct: 438 KLVEIDGYDVEVPFSRHLIVMKYEDRPGIVAVYGKEFGDAEVNIAGMQIARQEAGGRALS 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D + + VLE + + +++ +
Sbjct: 498 VLSVDSPVPDGVLENVRQAIQATSLREIDI 527
>gi|312144313|ref|YP_003995759.1| D-3-phosphoglycerate dehydrogenase [Halanaerobium sp.
'sapolanicus']
gi|311904964|gb|ADQ15405.1| D-3-phosphoglycerate dehydrogenase [Halanaerobium sp.
'sapolanicus']
Length = 534
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R I+I + D+D+ I + D G++ +G LGE INIA+ +GR + A+
Sbjct: 440 RVIEINGLRIDLDLSGEFIIVTYQDKPGVIGKIGTSLGEENINIANMQVGRQTAGGEAVM 499
Query: 68 FLCIDGSILNSVLEKLSVN 86
+ ID ++K+ +
Sbjct: 500 LMQIDSKPSPETMKKIKNH 518
>gi|288573665|ref|ZP_06392022.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Dethiosulfovibrio peptidovorans DSM 11002]
gi|288569406|gb|EFC90963.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Dethiosulfovibrio peptidovorans DSM 11002]
Length = 224
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G R +I D+D + I + D G++ + + L +NIA L R
Sbjct: 123 GGGSVRIQEIDGFPVDIDGELPTLVIFHRDKPGVMASITSELFRMKLNIAQMTLKRKARG 182
Query: 63 EHAISFLCIDGSILNSVLEKLS 84
+ A+ F+ +DG++ L+ L
Sbjct: 183 KDAMVFIEMDGALDEESLKSLE 204
>gi|320334822|ref|YP_004171533.1| D-3-phosphoglycerate dehydrogenase [Deinococcus maricopensis DSM
21211]
gi|319756111|gb|ADV67868.1| D-3-phosphoglycerate dehydrogenase [Deinococcus maricopensis DSM
21211]
Length = 538
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF R ++++ ++ ++ + N D G V + N+LG +GINIA LGRS+
Sbjct: 443 VFGR-MARLTRLRDYRVELAPEGFILIVSNQDKPGAVAKLSNLLGTWGINIAGMSLGRSE 501
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ L +D + L + + +
Sbjct: 502 RGGQALFTLTLDDGLTPEQLRAIRDLDVVENAYLVQ 537
>gi|294500972|ref|YP_003564672.1| L-serine dehydratase, iron-sulfur-dependent subunit beta [Bacillus
megaterium QM B1551]
gi|294350909|gb|ADE71238.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
megaterium QM B1551]
Length = 220
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK + ++ ++ I +V+ D G + V NIL ++ INI H + R +
Sbjct: 126 GGGKIQITELNGFELNLSGMNPAILVVHNDRFGAIATVTNILMKHSINIGHMEVSRKERG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E A+ + +D +I + V+E+L I V
Sbjct: 186 EVALMAIEMDTNIEDDVIEELKTLPHIIQV 215
>gi|311029987|ref|ZP_07708077.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
sp. m3-13]
Length = 220
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 43/93 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + + +V+ D G + V N+L ++ INI H + R +
Sbjct: 126 GGGKIEITELNGFALKLSGNHPALLVVHDDRYGAIAGVANVLAKFAINIGHMEVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ + +D +I +V+++LS I V +
Sbjct: 186 QKALMTIEVDQNIDEAVIQELSALPNITQVTKI 218
>gi|251783540|ref|YP_002997845.1| L-serine dehydratase subunit beta [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242392172|dbj|BAH82631.1| L-serinedehydratase beta subunit [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 225
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 39/90 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I V+ DI G++ V +IL INIA ++ R +
Sbjct: 132 GGGNIQVTELNGFSVSLSMNTPTIITVHQDIPGMIAKVTDILSSSNINIATMNVTRESAG 191
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E AI + +D ++ ++ I V
Sbjct: 192 EKAIMIIEVDSRECQDAVKSIAKIPNIHNV 221
>gi|327467647|gb|EGF13144.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis SK330]
Length = 234
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I IV+ D+ G++ V L Y INIA ++ R ++
Sbjct: 141 GGGNIQVTELNGFSVSLSMNTPTIIIVHQDVPGMIAHVTEALSRYNINIAQMNVTREKAG 200
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + ++ + V F+
Sbjct: 201 EKAIMIIEVDSRSCEEAINEIRNIPHLHNVNFFK 234
>gi|295706319|ref|YP_003599394.1| L-serine dehydratase, iron-sulfur-dependent subunit beta [Bacillus
megaterium DSM 319]
gi|294803978|gb|ADF41044.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
megaterium DSM 319]
Length = 220
Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK + ++ ++ I +V+ D G + V NIL ++ INI H + R +
Sbjct: 126 GGGKIQITELNGFELNLSGMNPAILVVHNDRFGAIATVTNILMKHSINIGHMEVSRKERG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E A+ + +D +I + V+E+L I V
Sbjct: 186 EVALMAIEMDTNIEDDVIEELKTLPHILQV 215
>gi|218296553|ref|ZP_03497281.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Thermus
aquaticus Y51MC23]
gi|218243095|gb|EED09627.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Thermus
aquaticus Y51MC23]
Length = 220
Score = 92.0 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 37/93 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G R + + + + N D G+V V IL + +NIA+ + R +
Sbjct: 123 GGGLVRVFDLDGFEVRLTGQAPTLVVKNVDTPGVVARVARILADDEVNIAYLTVSRKKKG 182
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ L +D + L+ L I +V+Q
Sbjct: 183 GEAMMSLEVDRPLSEVPLKYLEYLSYILWVRQI 215
>gi|50915204|ref|YP_061176.1| L-serine dehydratase beta subunit [Streptococcus pyogenes
MGAS10394]
gi|94991469|ref|YP_599569.1| L-serinedehydratase beta subunit [Streptococcus pyogenes MGAS10270]
gi|94995353|ref|YP_603451.1| L-serinedehydratase beta subunit [Streptococcus pyogenes MGAS10750]
gi|50904278|gb|AAT87993.1| L-serine dehydratase beta subunit [Streptococcus pyogenes
MGAS10394]
gi|94544977|gb|ABF35025.1| L-serinedehydratase beta subunit [Streptococcus pyogenes MGAS10270]
gi|94548861|gb|ABF38907.1| L-serinedehydratase beta subunit [Streptococcus pyogenes MGAS10750]
Length = 225
Score = 92.0 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I V+ DI G++ V +IL INIA ++ R +
Sbjct: 132 GGGNIQVTELNGFSVSLSMNTPTIVTVHKDIPGMIAKVTDILSSNNINIATMNVTRESAG 191
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E A + +D +++ I V
Sbjct: 192 EKATMIIEVDSRECQEAANQIAKIPHIYNV 221
>gi|72161018|ref|YP_288675.1| D-3-phosphoglycerate dehydrogenase [Thermobifida fusca YX]
gi|71914750|gb|AAZ54652.1| D-3-phosphoglycerate dehydrogenase [Thermobifida fusca YX]
Length = 528
Score = 92.0 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ +++ ++ M D G+V VG +LG+ +NIA + R + A+
Sbjct: 438 KLVEVNGYTMEIAPSEHMAFFSYHDRPGVVGVVGQLLGQAQVNIAGMQVSRDKEGGAALI 497
Query: 68 FLCIDGSILNSVLEKLSVNVT--IRFVKQF 95
L +D +I + LE +S + I V
Sbjct: 498 ALTVDSAIPDETLETISKEIGAEISRVDLV 527
>gi|307826385|ref|ZP_07656587.1| D-3-phosphoglycerate dehydrogenase [Methylobacter tundripaludum
SV96]
gi|307732562|gb|EFO03437.1| D-3-phosphoglycerate dehydrogenase [Methylobacter tundripaludum
SV96]
Length = 527
Score = 92.0 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 42/97 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ PR + I + + +V ++ + D G++ + ++LG INI+ +G +
Sbjct: 431 LLGGCHPRLVCIDQFDIEVVPVGTLLVTQHDDKPGVISAISSVLGNANINISRMQVGTAD 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + + + +L++L + Q
Sbjct: 491 EQQRAMAVISVSEPLTEDLLQQLCHIPAVHKAIQINL 527
>gi|327401404|ref|YP_004342243.1| D-3-phosphoglycerate dehydrogenase [Archaeoglobus veneficus SNP6]
gi|327316912|gb|AEA47528.1| D-3-phosphoglycerate dehydrogenase [Archaeoglobus veneficus SNP6]
Length = 523
Score = 92.0 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 1/95 (1%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHF-HLGRSQST 62
+ R ++I D + ++ D G++ VG + G++ INIA
Sbjct: 429 GSEYRIVRIDRYKVDFVPEGHYVISLHEDKPGVIGRVGTLFGKHNINIAGMLVGRYGGRG 488
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ L +D + VL+++ I
Sbjct: 489 GVQLMLLLVDDPPSDEVLDEMVKLDGIIDAVYVHL 523
>gi|224063477|ref|XP_002301163.1| predicted protein [Populus trichocarpa]
gi|222842889|gb|EEE80436.1| predicted protein [Populus trichocarpa]
Length = 598
Score = 92.0 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 39/86 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DGKP K+ DV + ++ D G++ VGNILGE +N+ +GR +
Sbjct: 505 DGKPHLTKVGSFGVDVSMEGSLVLCRQVDQPGMIGSVGNILGEENVNVNFMSVGRIAPRK 564
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +D L+++ +
Sbjct: 565 QAVMIIGVDEEPSKEALKRIGEIPAV 590
>gi|255593056|ref|XP_002535782.1| L-serine dehydratase, beta chain, putative [Ricinus communis]
gi|223521981|gb|EEF26601.1| L-serine dehydratase, beta chain, putative [Ricinus communis]
Length = 207
Score = 92.0 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I V+ DI G++ V +IL INIA ++ R +
Sbjct: 114 GGGNIQVTELNGFSVSLSMNTPTIVTVHKDIPGMIAKVTDILSSNNINIATMNVTRESAG 173
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E A + +D +++ I V
Sbjct: 174 EKATMIIEVDSRECQEAANQIAKIPHIYNV 203
>gi|56808668|ref|ZP_00366392.1| COG1760: L-serine deaminase [Streptococcus pyogenes M49 591]
Length = 223
Score = 92.0 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I V+ DI G++ V +IL INIA ++ R +
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTIVTVHKDIPGMIAKVTDILSSNNINIATMNVTRESAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E A + +D +++ I V
Sbjct: 190 EKATMIIEVDSRECQEAANQIAKIPHIYNV 219
>gi|254721740|ref|ZP_05183529.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. A1055]
Length = 219
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 126 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D + + V+E++ I V E
Sbjct: 186 RRALMVIETDEILADEVIEEIKAQQNICQVTIME 219
>gi|228477732|ref|ZP_04062361.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus salivarius SK126]
gi|228250621|gb|EEK09832.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus salivarius SK126]
Length = 223
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 43/94 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ ++ + + IV+ D+ G++ V +IL YGINIA + R +
Sbjct: 130 GGGNIQVTELNGFAVNLKMNTPTLIIVHQDVPGMIALVTDILSRYGINIAQMTVTRENAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + ID + + +++ + V F
Sbjct: 190 EKAIMIIEIDSHQCDEAVTEIARIPHLHNVNFFS 223
>gi|301103195|ref|XP_002900684.1| D-3-phosphoglycerate dehydrogenase, putative [Phytophthora
infestans T30-4]
gi|262101947|gb|EEY59999.1| D-3-phosphoglycerate dehydrogenase, putative [Phytophthora
infestans T30-4]
Length = 603
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 1 VFSDGKPRFIKIQEINFDVD---IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLG 57
VF + PR +++ E + D ++ N D+ G + + + L + INIA+F L
Sbjct: 506 VFGED-PRVVRVNEYS-DFPAFRPKGNILVFNNEDVPGAIAGILSELSDAKINIANFGLA 563
Query: 58 RSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVK 93
R + EH + L +D + L L ++R V+
Sbjct: 564 RQNNVEHPLGILALDSVPSDETLNALKDLPSVRSVR 599
>gi|206976230|ref|ZP_03237138.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus H3081.97]
gi|217961632|ref|YP_002340202.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus AH187]
gi|229140875|ref|ZP_04269420.1| L-serine dehydratase, beta chain [Bacillus cereus BDRD-ST26]
gi|229198269|ref|ZP_04324976.1| L-serine dehydratase, beta chain [Bacillus cereus m1293]
gi|206745426|gb|EDZ56825.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus H3081.97]
gi|217063021|gb|ACJ77271.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus AH187]
gi|228585148|gb|EEK43259.1| L-serine dehydratase, beta chain [Bacillus cereus m1293]
gi|228642665|gb|EEK98951.1| L-serine dehydratase, beta chain [Bacillus cereus BDRD-ST26]
Length = 220
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 127 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D + + V+E++ I V E
Sbjct: 187 RRALMVIETDEILADEVIEEIKAQQNICQVTIME 220
>gi|42783255|ref|NP_980502.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus ATCC 10987]
gi|49478556|ref|YP_038204.1| L-serine dehydratase subunit beta [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52141356|ref|YP_085473.1| L-serine dehydratase, beta subunit [Bacillus cereus E33L]
gi|118479337|ref|YP_896488.1| L-serine ammonia-lyase [Bacillus thuringiensis str. Al Hakam]
gi|196038789|ref|ZP_03106097.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus NVH0597-99]
gi|196047201|ref|ZP_03114417.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus 03BB108]
gi|218905278|ref|YP_002453112.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus AH820]
gi|222097588|ref|YP_002531645.1| l-serine dehydratase, beta subunit [Bacillus cereus Q1]
gi|225866124|ref|YP_002751502.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus 03BB102]
gi|228916779|ref|ZP_04080344.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228935461|ref|ZP_04098279.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947859|ref|ZP_04110146.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229093202|ref|ZP_04224320.1| L-serine dehydratase, beta chain [Bacillus cereus Rock3-42]
gi|229186386|ref|ZP_04313550.1| L-serine dehydratase, beta chain [Bacillus cereus BGSC 6E1]
gi|301055635|ref|YP_003793846.1| L-serine dehydratase subunit beta [Bacillus anthracis CI]
gi|42739183|gb|AAS43110.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus ATCC 10987]
gi|49330112|gb|AAT60758.1| L-serine dehydratase, beta subunit [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51974825|gb|AAU16375.1| L-serine dehydratase, beta subunit [Bacillus cereus E33L]
gi|118418562|gb|ABK86981.1| L-serine ammonia-lyase [Bacillus thuringiensis str. Al Hakam]
gi|196021950|gb|EDX60641.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus 03BB108]
gi|196030512|gb|EDX69111.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus NVH0597-99]
gi|218535694|gb|ACK88092.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus AH820]
gi|221241646|gb|ACM14356.1| L-serine dehydratase, beta subunit [Bacillus cereus Q1]
gi|225790694|gb|ACO30911.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus 03BB102]
gi|228597013|gb|EEK54669.1| L-serine dehydratase, beta chain [Bacillus cereus BGSC 6E1]
gi|228690176|gb|EEL43970.1| L-serine dehydratase, beta chain [Bacillus cereus Rock3-42]
gi|228811846|gb|EEM58180.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824213|gb|EEM70027.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228842966|gb|EEM88049.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|300377804|gb|ADK06708.1| L-serine dehydratase subunit beta [Bacillus cereus biovar anthracis
str. CI]
gi|324328045|gb|ADY23305.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 219
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 126 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D + + V+E++ I V E
Sbjct: 186 RRALMVIETDEILADEVIEEIKAQQNICQVTIME 219
>gi|15675923|ref|NP_270097.1| putative L-serine dehydratase subunit beta [Streptococcus pyogenes
M1 GAS]
gi|71911654|ref|YP_283204.1| L-serine dehydratase [Streptococcus pyogenes MGAS5005]
gi|13623162|gb|AAK34818.1| putative L-serine dehydratase beta subunit [Streptococcus pyogenes
M1 GAS]
gi|71854436|gb|AAZ52459.1| L-serine dehydratase [Streptococcus pyogenes MGAS5005]
Length = 223
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I V+ DI G++ V +IL INIA ++ R +
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTIVTVHKDIPGMIAKVTDILSSNNINIATMNVTRESAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E A + +D +++ I V
Sbjct: 190 EKATMIIEVDSRECQEAANQIAKIPHIYNV 219
>gi|261404380|ref|YP_003240621.1| L-serine dehydratase, iron-sulfur-dependent subunit beta
[Paenibacillus sp. Y412MC10]
gi|261280843|gb|ACX62814.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Paenibacillus sp. Y412MC10]
Length = 227
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 39/90 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +++ + + ++ + + D G+V + +L G+NIA+ + R
Sbjct: 126 GGGSVEMLRVNGFDVKFTMNYPVLLVFHDDTPGMVAHITRLLEAGGVNIAYMDVDRKGRG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A++ + D ++ +++ + ++ V
Sbjct: 186 GDAMTVVESDEAVPAELMKHIEGLPSVHRV 215
>gi|229152340|ref|ZP_04280533.1| L-serine dehydratase, beta chain [Bacillus cereus m1550]
gi|228631302|gb|EEK87938.1| L-serine dehydratase, beta chain [Bacillus cereus m1550]
Length = 220
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 127 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D + + V+E++ I V E
Sbjct: 187 RRALMVIETDELLADEVIEEIKAQQNICQVTIME 220
>gi|30022220|ref|NP_833851.1| L-serine dehydratase [Bacillus cereus ATCC 14579]
gi|206970981|ref|ZP_03231932.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus AH1134]
gi|218235415|ref|YP_002368942.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus B4264]
gi|228922889|ref|ZP_04086187.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228954424|ref|ZP_04116450.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228960407|ref|ZP_04122059.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229047832|ref|ZP_04193412.1| L-serine dehydratase, beta chain [Bacillus cereus AH676]
gi|229071645|ref|ZP_04204863.1| L-serine dehydratase, beta chain [Bacillus cereus F65185]
gi|229081397|ref|ZP_04213900.1| L-serine dehydratase, beta chain [Bacillus cereus Rock4-2]
gi|229111613|ref|ZP_04241164.1| L-serine dehydratase, beta chain [Bacillus cereus Rock1-15]
gi|229129419|ref|ZP_04258390.1| L-serine dehydratase, beta chain [Bacillus cereus BDRD-Cer4]
gi|229146715|ref|ZP_04275081.1| L-serine dehydratase, beta chain [Bacillus cereus BDRD-ST24]
gi|229180420|ref|ZP_04307763.1| L-serine dehydratase, beta chain [Bacillus cereus 172560W]
gi|229192352|ref|ZP_04319316.1| L-serine dehydratase, beta chain [Bacillus cereus ATCC 10876]
gi|29897777|gb|AAP11052.1| L-serine dehydratase [Bacillus cereus ATCC 14579]
gi|206733753|gb|EDZ50924.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus AH1134]
gi|218163372|gb|ACK63364.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus B4264]
gi|228591132|gb|EEK48987.1| L-serine dehydratase, beta chain [Bacillus cereus ATCC 10876]
gi|228603167|gb|EEK60645.1| L-serine dehydratase, beta chain [Bacillus cereus 172560W]
gi|228636735|gb|EEK93199.1| L-serine dehydratase, beta chain [Bacillus cereus BDRD-ST24]
gi|228654024|gb|EEL09891.1| L-serine dehydratase, beta chain [Bacillus cereus BDRD-Cer4]
gi|228671995|gb|EEL27288.1| L-serine dehydratase, beta chain [Bacillus cereus Rock1-15]
gi|228702019|gb|EEL54502.1| L-serine dehydratase, beta chain [Bacillus cereus Rock4-2]
gi|228711581|gb|EEL63538.1| L-serine dehydratase, beta chain [Bacillus cereus F65185]
gi|228723624|gb|EEL74989.1| L-serine dehydratase, beta chain [Bacillus cereus AH676]
gi|228799268|gb|EEM46233.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228805356|gb|EEM51949.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228836944|gb|EEM82287.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 220
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 127 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D + + V+E++ I V E
Sbjct: 187 RRALMVIETDELLADEVIEEIKAQQNICQVTIME 220
>gi|168014318|ref|XP_001759699.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689238|gb|EDQ75611.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 575
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 44/94 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ + DV + +I D G++ VG+ILGE +NI+ +GR+ +
Sbjct: 482 DGVPHLSKVGNFSVDVSLDGNVILYRQVDQPGMIGKVGSILGEDNVNISFMSVGRTLRGQ 541
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI + D + ++ ++KL I +
Sbjct: 542 AAIVAIGTDEDVSDATIQKLKELPAIEELVFLRL 575
>gi|71904535|ref|YP_281338.1| L-serine dehydratase [Streptococcus pyogenes MGAS6180]
gi|71803630|gb|AAX72983.1| L-serine dehydratase [Streptococcus pyogenes MGAS6180]
Length = 225
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I V+ DI G++ V +IL INIA ++ R +
Sbjct: 132 GGGNIQVTELNGFSVSLSMNTPTIVTVHKDIPGMIAKVTDILSSNNINIATMNVTRESAG 191
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E A + +D +++ I V
Sbjct: 192 EKATMIIEVDSRECQEAANQIAKIPHIYNV 221
>gi|302142267|emb|CBI19470.3| unnamed protein product [Vitis vinifera]
Length = 532
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 43/94 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DGKP K+ DV + +I + + D GI+ VG+ILGE +N++ +GR+ +
Sbjct: 439 DGKPHLTKVGSFGVDVSLEGSLILLRHVDQPGIIGKVGSILGEENVNVSFMSVGRTAPRK 498
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ + +D L ++ I E
Sbjct: 499 QAVMTIGVDEEPSREALTRIGNLPAIEEFVFLEL 532
>gi|323128292|gb|ADX25589.1| putative L-serine dehydratase beta subunit [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
Length = 223
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 39/90 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I V+ DI G++ V +IL INIA ++ R +
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTIITVHQDIPGMIAKVTDILSSSNINIATMNVTRESAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E AI + +D ++ ++ I V
Sbjct: 190 EKAIMIIEVDSRECQDAVKSIAKIPNIHNV 219
>gi|19747022|ref|NP_608158.1| putative L-serine dehydratase beta subunit [Streptococcus pyogenes
MGAS8232]
gi|21911377|ref|NP_665645.1| putative L-serine dehydratase beta subunit [Streptococcus pyogenes
MGAS315]
gi|28896749|ref|NP_803099.1| L-serine dehydratase beta subunit [Streptococcus pyogenes SSI-1]
gi|139474610|ref|YP_001129326.1| putative L-serine dehydratase, beta chain [Streptococcus pyogenes
str. Manfredo]
gi|306826438|ref|ZP_07459750.1| L-serine ammonia-lyase beta subunit [Streptococcus pyogenes ATCC
10782]
gi|19749280|gb|AAL98657.1| putative L-serine dehydratase beta subunit [Streptococcus pyogenes
MGAS8232]
gi|21905593|gb|AAM80448.1| putative L-serine dehydratase beta subunit [Streptococcus pyogenes
MGAS315]
gi|28812003|dbj|BAC64932.1| putative L-serine dehydratase beta subunit [Streptococcus pyogenes
SSI-1]
gi|134272857|emb|CAM31138.1| putative L-serine dehydratase, beta chain [Streptococcus pyogenes
str. Manfredo]
gi|304431368|gb|EFM34365.1| L-serine ammonia-lyase beta subunit [Streptococcus pyogenes ATCC
10782]
Length = 223
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I V+ DI G++ V +IL INIA ++ R +
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTIVTVHKDIPGMIAKVTDILSSNNINIATMNVTRESAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E A + +D +++ I V
Sbjct: 190 EKATMIIEVDSRECQEAANQIAKIPHIYNV 219
>gi|224100535|ref|XP_002311914.1| predicted protein [Populus trichocarpa]
gi|222851734|gb|EEE89281.1| predicted protein [Populus trichocarpa]
Length = 637
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 40/85 (47%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
GKP ++ + DV + +I D G++ VGNILGE +N++ +GR+
Sbjct: 545 GKPHLTRVGSFSVDVSLEGNLILCRQVDQPGMIGQVGNILGEQNVNVSFMSVGRTVQRRK 604
Query: 65 AISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D L+K+ I
Sbjct: 605 AIMAIGVDEEPNQETLKKIGEVPAI 629
>gi|327438749|dbj|BAK15114.1| phosphoglycerate dehydrogenase [Solibacillus silvestris StLB046]
Length = 541
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 39/97 (40%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + R +K++ DV ++ I N D G + V L E INIA +GR Q
Sbjct: 445 LLNGLGARIVKVEGFVVDVIPNGNLLYIKNQDKPGSIGRVATKLAEKDINIATMQVGRDQ 504
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + L ++ I VK
Sbjct: 505 IGGSAVMMLVVDNEVTTEDLIFVAQLENIDEVKAITL 541
>gi|167462040|ref|ZP_02327129.1| L-serine dehydratase beta subunit [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 220
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 45/93 (48%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ + I +V+ D G + V N+L ++ INI H + R +
Sbjct: 126 GGGKIEIIELNGFELKLSGEHPAILVVHNDRYGAIASVTNVLTKHYINIGHMEVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
++A+ + +D ++ + ++E++S I V +
Sbjct: 186 KNALMIIEMDQNLDDYIIEEISKLPNILQVTKI 218
>gi|296504631|ref|YP_003666331.1| L-serine dehydratase [Bacillus thuringiensis BMB171]
gi|296325683|gb|ADH08611.1| L-serine dehydratase [Bacillus thuringiensis BMB171]
Length = 220
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 127 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D + + V+E++ I V E
Sbjct: 187 RRALMVIETDELLADEVIEEIKAQQNICQVTIME 220
>gi|307705811|ref|ZP_07642654.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus mitis SK597]
gi|307620643|gb|EFN99736.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus mitis SK597]
Length = 223
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 44/94 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ DI G++ V L YGINIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + +EK+ + V F+
Sbjct: 190 EKAIMIIEVDSRNCDEAIEKIRKIPHLHNVNFFK 223
>gi|255029164|ref|ZP_05301115.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Listeria
monocytogenes LO28]
Length = 243
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 38/86 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ E + I I++ D G + V +++ ++ INI + R
Sbjct: 129 GGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVSRKVKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVT 88
+ A+ + +D + +++ K++
Sbjct: 189 DEALMVIEVDQQVEQALISKIAELSG 214
>gi|196034904|ref|ZP_03102311.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus W]
gi|228929189|ref|ZP_04092216.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229123662|ref|ZP_04252857.1| L-serine dehydratase, beta chain [Bacillus cereus 95/8201]
gi|195992443|gb|EDX56404.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus W]
gi|228659797|gb|EEL15442.1| L-serine dehydratase, beta chain [Bacillus cereus 95/8201]
gi|228830479|gb|EEM76089.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 219
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 126 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D + + V+E++ I V E
Sbjct: 186 RRALMVIETDEILADEVIEEIKAQQNICQVTIME 219
>gi|227554207|ref|ZP_03984254.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis HH22]
gi|227176654|gb|EEI57626.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis HH22]
gi|315170480|gb|EFU14497.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX1342]
gi|315573760|gb|EFU85951.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0309B]
gi|315580274|gb|EFU92465.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0309A]
Length = 233
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 41/93 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G +V+ D+ G++ V NIL INI+ + R
Sbjct: 140 GGGNIQISELNGFKLSLSMGTPTFIVVHQDVPGMIAKVTNILSASDINISTMTVTRESKG 199
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E AI + +D + + ++ +L+ I V F
Sbjct: 200 EKAIMIIEVDQAEVGDIVMQLAEIPHIYSVNYF 232
>gi|306834575|ref|ZP_07467688.1| L-serine ammonia-lyase beta subunit [Streptococcus bovis ATCC
700338]
gi|304423377|gb|EFM26530.1| L-serine ammonia-lyase beta subunit [Streptococcus bovis ATCC
700338]
Length = 223
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ + + + + IV+ DI G++ V +IL E+ INIA ++ R ++
Sbjct: 130 GGGNIEVTELNGFSVSLKMNTPTLIIVHQDIPGMIAKVTDILSEHNINIAQMNVTRERAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E AI + +D + +E++ + V
Sbjct: 190 EKAIMIIEVDSRDCHKAVEQIQQIPHLHNV 219
>gi|257784308|ref|YP_003179525.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Atopobium parvulum DSM 20469]
gi|257472815|gb|ACV50934.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Atopobium parvulum DSM 20469]
Length = 549
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 34/95 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ R + + I + + D G++ + IL IN+A RS+
Sbjct: 128 GGGRIRISGVNGARIHMSGDMPTIFVSHRDKPGVLAALTTILATQNINVATMRTFRSERG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A + ID I VL+ + + + Q
Sbjct: 188 GFAHTVFEIDEPIEQKVLDLFQLAPHVSYAAQVSI 222
>gi|225857971|ref|YP_002739481.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae 70585]
gi|225721396|gb|ACO17250.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae 70585]
Length = 223
Score = 91.6 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ DI G++ V L YGINIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK 223
>gi|23098973|ref|NP_692439.1| L-serine dehydratase beta subunit [Oceanobacillus iheyensis HTE831]
gi|22777201|dbj|BAC13474.1| L-serine dehydratase beta subunit [Oceanobacillus iheyensis HTE831]
Length = 220
Score = 91.6 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 40/93 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + I I++ D G + V IL ++ INI H + R
Sbjct: 126 GGGKVEITELNGFELRLSGNHPAILIMHNDRFGAIASVTKILAKHEINIGHMEVNRKDVG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ + +D +I + +L +L+ I + +
Sbjct: 186 KEALMVIEVDQNIEDEILNELNAADHIISISKI 218
>gi|329930404|ref|ZP_08283967.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Paenibacillus sp. HGF5]
gi|328935055|gb|EGG31543.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Paenibacillus sp. HGF5]
Length = 227
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 39/90 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +++ + + ++ + + D G+V + +L G+NIA+ + R
Sbjct: 126 GGGSVEMLRVNGFDVKFTMNYPVLLVFHDDTPGMVAHITRLLEAGGVNIAYMDVDRKGRG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A++ + D ++ +++ + ++ V
Sbjct: 186 GDAMTVVESDEAVPAELMKHIEGLPSVHRV 215
>gi|227519493|ref|ZP_03949542.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0104]
gi|229544896|ref|ZP_04433621.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX1322]
gi|229549163|ref|ZP_04437888.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis ATCC 29200]
gi|255971880|ref|ZP_05422466.1| L-serine deaminase [Enterococcus faecalis T1]
gi|256616778|ref|ZP_05473624.1| L-serine deaminase [Enterococcus faecalis ATCC 4200]
gi|256763346|ref|ZP_05503926.1| L-serine deaminase [Enterococcus faecalis T3]
gi|256854020|ref|ZP_05559385.1| L-serine dehydratase [Enterococcus faecalis T8]
gi|256957948|ref|ZP_05562119.1| L-serine deaminase [Enterococcus faecalis DS5]
gi|256961032|ref|ZP_05565203.1| L-serine deaminase [Enterococcus faecalis Merz96]
gi|256963826|ref|ZP_05567997.1| L-serine deaminase [Enterococcus faecalis HIP11704]
gi|257079886|ref|ZP_05574247.1| L-serine deaminase [Enterococcus faecalis JH1]
gi|257081715|ref|ZP_05576076.1| L-serine deaminase [Enterococcus faecalis E1Sol]
gi|257084312|ref|ZP_05578673.1| L-serine deaminase [Enterococcus faecalis Fly1]
gi|257087689|ref|ZP_05582050.1| L-serine deaminase [Enterococcus faecalis D6]
gi|257090907|ref|ZP_05585268.1| L-serine deaminase [Enterococcus faecalis CH188]
gi|257416891|ref|ZP_05593885.1| L-serine deaminase [Enterococcus faecalis AR01/DG]
gi|257420113|ref|ZP_05597107.1| L-serine deaminase [Enterococcus faecalis T11]
gi|257421666|ref|ZP_05598656.1| L-serine dehydratase [Enterococcus faecalis X98]
gi|293384578|ref|ZP_06630444.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis R712]
gi|293386807|ref|ZP_06631378.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis S613]
gi|300860470|ref|ZP_07106557.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TUSoD Ef11]
gi|307269249|ref|ZP_07550603.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX4248]
gi|307271773|ref|ZP_07553044.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0855]
gi|307276958|ref|ZP_07558068.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX2134]
gi|307288659|ref|ZP_07568640.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0109]
gi|307290274|ref|ZP_07570190.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0411]
gi|312900082|ref|ZP_07759399.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0470]
gi|312902546|ref|ZP_07761752.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0635]
gi|312906404|ref|ZP_07765412.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis DAPTO 512]
gi|312951895|ref|ZP_07770783.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0102]
gi|312979437|ref|ZP_07791125.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis DAPTO 516]
gi|227073105|gb|EEI11068.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0104]
gi|229305717|gb|EEN71713.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis ATCC 29200]
gi|229309997|gb|EEN75984.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX1322]
gi|255962898|gb|EET95374.1| L-serine deaminase [Enterococcus faecalis T1]
gi|256596305|gb|EEU15481.1| L-serine deaminase [Enterococcus faecalis ATCC 4200]
gi|256684597|gb|EEU24292.1| L-serine deaminase [Enterococcus faecalis T3]
gi|256710963|gb|EEU26006.1| L-serine dehydratase [Enterococcus faecalis T8]
gi|256948444|gb|EEU65076.1| L-serine deaminase [Enterococcus faecalis DS5]
gi|256951528|gb|EEU68160.1| L-serine deaminase [Enterococcus faecalis Merz96]
gi|256954322|gb|EEU70954.1| L-serine deaminase [Enterococcus faecalis HIP11704]
gi|256987916|gb|EEU75218.1| L-serine deaminase [Enterococcus faecalis JH1]
gi|256989745|gb|EEU77047.1| L-serine deaminase [Enterococcus faecalis E1Sol]
gi|256992342|gb|EEU79644.1| L-serine deaminase [Enterococcus faecalis Fly1]
gi|256995719|gb|EEU83021.1| L-serine deaminase [Enterococcus faecalis D6]
gi|256999719|gb|EEU86239.1| L-serine deaminase [Enterococcus faecalis CH188]
gi|257158719|gb|EEU88679.1| L-serine deaminase [Enterococcus faecalis ARO1/DG]
gi|257161941|gb|EEU91901.1| L-serine deaminase [Enterococcus faecalis T11]
gi|257163490|gb|EEU93450.1| L-serine dehydratase [Enterococcus faecalis X98]
gi|291078124|gb|EFE15488.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis R712]
gi|291083810|gb|EFE20773.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis S613]
gi|300849509|gb|EFK77259.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TUSoD Ef11]
gi|306498695|gb|EFM68196.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0411]
gi|306500413|gb|EFM69749.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0109]
gi|306506381|gb|EFM75541.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX2134]
gi|306511651|gb|EFM80650.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0855]
gi|306514468|gb|EFM83029.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX4248]
gi|310627558|gb|EFQ10841.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis DAPTO 512]
gi|310630084|gb|EFQ13367.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0102]
gi|310634216|gb|EFQ17499.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0635]
gi|311287808|gb|EFQ66364.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis DAPTO 516]
gi|311292839|gb|EFQ71395.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0470]
gi|315025512|gb|EFT37444.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX2137]
gi|315030458|gb|EFT42390.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX4000]
gi|315032570|gb|EFT44502.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0017]
gi|315035093|gb|EFT47025.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0027]
gi|315143888|gb|EFT87904.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX2141]
gi|315148683|gb|EFT92699.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX4244]
gi|315154315|gb|EFT98331.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0031]
gi|315155584|gb|EFT99600.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0043]
gi|315159592|gb|EFU03609.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0312]
gi|315165290|gb|EFU09307.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX1302]
gi|315168703|gb|EFU12720.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX1341]
gi|315579645|gb|EFU91836.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0630]
gi|327535938|gb|AEA94772.1| L-serine dehydratase [Enterococcus faecalis OG1RF]
gi|329578038|gb|EGG59452.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX1467]
Length = 233
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 41/93 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G +V+ D+ G++ V NIL INI+ + R
Sbjct: 140 GGGNIQISELNGFKLSLSMGTPTFIVVHQDVPGMIAKVTNILSASDINISTMTVTRESKG 199
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E AI + +D + + ++ +L+ I V F
Sbjct: 200 EKAIMIIEVDQAEVGDIVMQLAEIPHIYSVNYF 232
>gi|168335116|ref|ZP_02693224.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Epulopiscium sp. 'N.t. morphotype B']
Length = 212
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 37/88 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + + I I+ + I I D+ G+V + N L INIA L R +
Sbjct: 125 GGGNIKIVNINGIDIEFSGEYYTILIKQKDVKGVVAHITNCLSGCDINIAFMRLYREEKG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIR 90
E A + + D I + V+ + N +I
Sbjct: 185 EMAYTIIEADNPIDDDVIRFVKKNKSIL 212
>gi|255974875|ref|ZP_05425461.1| L-serine deaminase [Enterococcus faecalis T2]
gi|307278731|ref|ZP_07559798.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0860]
gi|255967747|gb|EET98369.1| L-serine deaminase [Enterococcus faecalis T2]
gi|306504592|gb|EFM73795.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0860]
Length = 233
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 41/93 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G +V+ D+ G++ V NIL INI+ + R
Sbjct: 140 GGGNIQISELNGFKLSLSMGTPTFIVVHQDVPGMIAKVTNILSASDINISTMTVTRESKG 199
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E AI + +D + + ++ +L+ I V F
Sbjct: 200 EKAIMIIEVDQAEVGDIVMQLAEIPHIYSVNYF 232
>gi|15900049|ref|NP_344653.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae TIGR4]
gi|15902139|ref|NP_357689.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae R6]
gi|111656936|ref|ZP_01407755.1| hypothetical protein SpneT_02001824 [Streptococcus pneumoniae
TIGR4]
gi|116516124|ref|YP_815593.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae D39]
gi|148985451|ref|ZP_01818656.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP3-BS71]
gi|148987836|ref|ZP_01819299.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP6-BS73]
gi|148994301|ref|ZP_01823565.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP9-BS68]
gi|148996513|ref|ZP_01824231.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP11-BS70]
gi|149001808|ref|ZP_01826781.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP14-BS69]
gi|149007919|ref|ZP_01831497.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP18-BS74]
gi|149010968|ref|ZP_01832273.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP19-BS75]
gi|149017779|ref|ZP_01834238.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP23-BS72]
gi|168483590|ref|ZP_02708542.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae CDC1873-00]
gi|168489423|ref|ZP_02713622.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP195]
gi|168492418|ref|ZP_02716561.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae CDC0288-04]
gi|168493808|ref|ZP_02717951.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae CDC3059-06]
gi|168577059|ref|ZP_02722888.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae MLV-016]
gi|182683072|ref|YP_001834819.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae CGSP14]
gi|194397086|ref|YP_002036818.1| L-serine dehydratase subunit alpha [Streptococcus pneumoniae G54]
gi|221231041|ref|YP_002510193.1| putative L-serine dehydratase, beta chain [Streptococcus pneumoniae
ATCC 700669]
gi|225853731|ref|YP_002735243.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae JJA]
gi|225855886|ref|YP_002737397.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae P1031]
gi|225860141|ref|YP_002741650.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae Taiwan19F-14]
gi|237650917|ref|ZP_04525169.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae CCRI 1974]
gi|237821344|ref|ZP_04597189.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae CCRI 1974M2]
gi|298229649|ref|ZP_06963330.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254962|ref|ZP_06978548.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae str. Canada MDR_19A]
gi|298501897|ref|YP_003723837.1| L-serine ammonia-lyase [Streptococcus pneumoniae TCH8431/19A]
gi|303254802|ref|ZP_07340902.1| putative L-serine dehydratase, beta chain [Streptococcus pneumoniae
BS455]
gi|303259148|ref|ZP_07345126.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP-BS293]
gi|303260905|ref|ZP_07346854.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP14-BS292]
gi|303263232|ref|ZP_07349155.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae BS397]
gi|303267675|ref|ZP_07353505.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae BS457]
gi|303270023|ref|ZP_07355749.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae BS458]
gi|307066778|ref|YP_003875744.1| L-serine deaminase [Streptococcus pneumoniae AP200]
gi|307126328|ref|YP_003878359.1| L-serine dehydratase, iron-sulfur-dependent subunit beta
[Streptococcus pneumoniae 670-6B]
gi|307707808|ref|ZP_07644285.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus mitis NCTC 12261]
gi|307710252|ref|ZP_07646695.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus mitis SK564]
gi|14971573|gb|AAK74293.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae TIGR4]
gi|15457631|gb|AAK98899.1| L-serine dehydratase beta subunit [Streptococcus pneumoniae R6]
gi|116076700|gb|ABJ54420.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae D39]
gi|147757088|gb|EDK64127.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP11-BS70]
gi|147760266|gb|EDK67255.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP14-BS69]
gi|147760542|gb|EDK67517.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP18-BS74]
gi|147764604|gb|EDK71534.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP19-BS75]
gi|147922409|gb|EDK73529.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP3-BS71]
gi|147926300|gb|EDK77373.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP6-BS73]
gi|147927331|gb|EDK78363.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP9-BS68]
gi|147931343|gb|EDK82321.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP23-BS72]
gi|172042964|gb|EDT51010.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae CDC1873-00]
gi|182628406|gb|ACB89354.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae CGSP14]
gi|183572127|gb|EDT92655.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP195]
gi|183573438|gb|EDT93966.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae CDC0288-04]
gi|183576188|gb|EDT96716.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae CDC3059-06]
gi|183577289|gb|EDT97817.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae MLV-016]
gi|194356753|gb|ACF55201.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae G54]
gi|220673501|emb|CAR67976.1| putative L-serine dehydratase, beta chain [Streptococcus pneumoniae
ATCC 700669]
gi|225722246|gb|ACO18099.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae JJA]
gi|225724697|gb|ACO20549.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae P1031]
gi|225727062|gb|ACO22913.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae Taiwan19F-14]
gi|298237492|gb|ADI68623.1| L-serine ammonia-lyase [Streptococcus pneumoniae TCH8431/19A]
gi|301793403|emb|CBW35769.1| putative L-serine dehydratase, beta chain [Streptococcus pneumoniae
INV104]
gi|301799272|emb|CBW31795.1| putative L-serine dehydratase, beta chain [Streptococcus pneumoniae
OXC141]
gi|301801063|emb|CBW33730.1| putative L-serine dehydratase, beta chain [Streptococcus pneumoniae
INV200]
gi|302598239|gb|EFL65285.1| putative L-serine dehydratase, beta chain [Streptococcus pneumoniae
BS455]
gi|302637742|gb|EFL68228.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP14-BS292]
gi|302639566|gb|EFL70023.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae SP-BS293]
gi|302640444|gb|EFL70865.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae BS458]
gi|302642791|gb|EFL73108.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae BS457]
gi|302647005|gb|EFL77229.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae BS397]
gi|306408315|gb|ADM83742.1| L-serine deaminase [Streptococcus pneumoniae AP200]
gi|306483390|gb|ADM90259.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae 670-6B]
gi|307616068|gb|EFN95264.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus mitis NCTC 12261]
gi|307619014|gb|EFN98147.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus mitis SK564]
gi|327390514|gb|EGE88854.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae GA04375]
gi|332075775|gb|EGI86242.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae GA17570]
gi|332076564|gb|EGI87026.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae GA17545]
gi|332077409|gb|EGI87870.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae GA41301]
Length = 223
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ DI G++ V L YGINIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK 223
>gi|315151757|gb|EFT95773.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0012]
Length = 233
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 41/93 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G +V+ D+ G++ V NIL INI+ + R
Sbjct: 140 GGGNIQISELNGFKLSLSMGTPTFIVVHQDVPGMIAKVTNILSASDINISTMTVTRESKG 199
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E AI + +D + + ++ +L+ I V F
Sbjct: 200 EKAIMIIEVDQAEVGDIVMQLAEIPHIYSVNYF 232
>gi|209560264|ref|YP_002286736.1| L-serine dehydratase, beta subunit [Streptococcus pyogenes NZ131]
gi|209541465|gb|ACI62041.1| L-serine dehydratase, beta subunit [Streptococcus pyogenes NZ131]
Length = 223
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 36/87 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I V+ DI G++ V +IL INIA ++ R +
Sbjct: 130 GGGNIQITELNGFSVSLSMNTPTIVTVHKDIPGMIAKVTDILSSNNINIATMNVTRESAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTI 89
E A + +D +++ I
Sbjct: 190 EKATMIIEVDSRECQEAANQIAKIPHI 216
>gi|307711111|ref|ZP_07647533.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus mitis SK321]
gi|307617073|gb|EFN96251.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus mitis SK321]
Length = 223
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ DI G++ V L YGINIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK 223
>gi|169834395|ref|YP_001693626.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae Hungary19A-6]
gi|168996897|gb|ACA37509.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae Hungary19A-6]
Length = 223
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ DI G++ V L YGINIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK 223
>gi|323342650|ref|ZP_08082882.1| L-serine ammonia-lyase beta subunit [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322463762|gb|EFY08956.1| L-serine ammonia-lyase beta subunit [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 223
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 38/93 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + +I ++D G I I + D G++ V IL E INI + R +
Sbjct: 129 GGGNVKITEINGTKVEIDGGVATILIFHEDCPGMIAKVATILSEMHINIGSMKVDREEKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + +D L + L++L I V
Sbjct: 189 KKAYMVIELDQDDLETSLDRLRCVENIYEVLYI 221
>gi|293364418|ref|ZP_06611144.1| L-serine ammonia-lyase beta subunit [Streptococcus oralis ATCC
35037]
gi|307702617|ref|ZP_07639569.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus oralis ATCC 35037]
gi|322375122|ref|ZP_08049636.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus sp. C300]
gi|291317264|gb|EFE57691.1| L-serine ammonia-lyase beta subunit [Streptococcus oralis ATCC
35037]
gi|307623733|gb|EFO02718.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus oralis ATCC 35037]
gi|321280622|gb|EFX57661.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus sp. C300]
Length = 223
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ D+ G++ V L + INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDVPGMIAHVTEALSRFDINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRSCEEAIEEIRKIPHLHNVNFFK 223
>gi|313889530|ref|ZP_07823176.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pseudoporcinus SPIN 20026]
gi|313122142|gb|EFR45235.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pseudoporcinus SPIN 20026]
Length = 223
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 42/90 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + + IV+ DI G++ V +IL EY INIA ++ R +
Sbjct: 130 GGGNIQVTELNGFSVSLTMNTPTLIIVHQDIPGMIAKVTDILSEYEINIAQMNVTRESAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E AI + +D + K++ + V
Sbjct: 190 EKAIMIIEVDTHDCQDAVNKIATIPHLHNV 219
>gi|291301774|ref|YP_003513052.1| D-3-phosphoglycerate dehydrogenase [Stackebrandtia nassauensis DSM
44728]
gi|290570994|gb|ADD43959.1| D-3-phosphoglycerate dehydrogenase [Stackebrandtia nassauensis DSM
44728]
Length = 533
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ +I + ++D ++ + D GIV +G LG+ INI + R ++ A+
Sbjct: 442 KLTEIDGYDVEIDAEGPLLIMRYTDRPGIVGLIGGSLGDESINIGAMQVSRREAGGEALM 501
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ D + +L KL+ V
Sbjct: 502 IVATDAEVPADLLTKLAGTVGATSASAVTL 531
>gi|211906486|gb|ACJ11736.1| phosphoglycerate dehydrogenase [Gossypium hirsutum]
Length = 602
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG+ILGE +N++ +GR +
Sbjct: 509 DGIPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGTVGSILGEENVNVSFMSVGRVAPRK 568
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
HA+ + +D L+++ I
Sbjct: 569 HAVMAIGVDEQPSKETLKRIGEVPAI 594
>gi|70726201|ref|YP_253115.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus haemolyticus
JCSC1435]
gi|68446925|dbj|BAE04509.1| D-3-phosphoglycerate dehydrogenase [Staphylococcus haemolyticus
JCSC1435]
Length = 532
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 39/92 (42%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V + R ++I + + D + + D G+V G +LG + INIA LGR+
Sbjct: 433 VIAGFGARIVRINDYSVDFKPNAYQLVSYHGDKPGMVGLTGQLLGRHNINIASMSLGRNI 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID + ++ +L +
Sbjct: 493 QGGQAMMVLSIDQPVTEDIINELYDVGGFDKI 524
>gi|300856490|ref|YP_003781474.1| L-serine dehydratase subunit beta [Clostridium ljungdahlii DSM
13528]
gi|300436605|gb|ADK16372.1| L-serine dehydratase, beta chain [Clostridium ljungdahlii DSM
13528]
Length = 227
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ-S 61
G ++ + I I + D+ G+V V +IL ++ INIA + R
Sbjct: 127 GGGNVVISEVDGDKIEFTGSYPTILINHMDVPGMVAKVSDILYKHKINIAFMRVYRKSTR 186
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A +D I V+ +++ I+ ++
Sbjct: 187 GSGATMVFEVDDLISEDVVNEINEISNIKKIRAIN 221
>gi|289168806|ref|YP_003447075.1| L-serine dehydratase, beta subunit [Streptococcus mitis B6]
gi|288908373|emb|CBJ23215.1| L-serine dehydratase, beta subunit [Streptococcus mitis B6]
Length = 223
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 44/94 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ DI G++ V L YGINIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + ++++ + V F+
Sbjct: 190 EKAIMIIEVDSRNCDEAIDEIRKIPHLHNVNFFK 223
>gi|315612248|ref|ZP_07887162.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis ATCC
49296]
gi|315315641|gb|EFU63679.1| L-serine ammonia-lyase beta subunit [Streptococcus sanguinis ATCC
49296]
Length = 223
Score = 91.3 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ D+ G++ V L + INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDVPGMIAHVTEALSRFDINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRSCEEAIEEIRKIPHLHNVNFFK 223
>gi|297583998|ref|YP_003699778.1| L-serine dehydratase subunit beta [Bacillus selenitireducens MLS10]
gi|297142455|gb|ADH99212.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
selenitireducens MLS10]
Length = 220
Score = 91.3 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 36/94 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + I +V+ D G + V L + INI H + R +
Sbjct: 126 GGGKVEIKELNGFKLRLSGNHPAILVVHNDRYGTIASVATKLADKKINIGHMEVSRKEEG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A+ + +D ++ + L L I V +
Sbjct: 186 KEALMVIEVDENVEDDTLRSLETLDNITKVTKIH 219
>gi|313680095|ref|YP_004057834.1| l-serine ammonia-lyase [Oceanithermus profundus DSM 14977]
gi|313152810|gb|ADR36661.1| L-serine ammonia-lyase [Oceanithermus profundus DSM 14977]
Length = 215
Score = 91.3 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 38/93 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G R K+ ++ + + + + D G++ V +L + INIA GR +
Sbjct: 118 GGGSVRIWKVDGLDAYLSGEGPALLVRHVDTPGVIARVARVLADDEINIARIVSGRDRKG 177
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ L D + + L L+ + +VK
Sbjct: 178 GEALMSLETDHPLSDVALAYLAHLSYVHWVKAL 210
>gi|172057923|ref|YP_001814383.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Exiguobacterium sibiricum 255-15]
gi|171990444|gb|ACB61366.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Exiguobacterium sibiricum 255-15]
Length = 220
Score = 91.3 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 41/89 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ + + G + +++ D G + V +IL +Y INI H + R +
Sbjct: 126 GGGTIEITELNGVPLKLSGGGPALIVLHHDRFGAIAAVTSILADYEINIGHMEVSRHEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRF 91
+ A+ + ID + +VLE+++ +
Sbjct: 186 KQALMAIEIDDRMPTAVLEEINRLPQVER 214
>gi|315174944|gb|EFU18961.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX1346]
Length = 233
Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 41/93 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G +V+ D+ G++ V NIL INI+ + R
Sbjct: 140 GGGNIQISELNGFKLSLSMGTPTFIVVHQDVPGMIAKVTNILSASDINISTMTVTRESKG 199
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E AI + +D + + ++ +L+ I V F
Sbjct: 200 EKAIMIIEVDQAEVGDIVMQLAEIPHIYSVNYF 232
>gi|168487053|ref|ZP_02711561.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae CDC1087-00]
gi|183570010|gb|EDT90538.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus pneumoniae CDC1087-00]
Length = 223
Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ DI G++ V L YGINIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK 223
>gi|309799033|ref|ZP_07693286.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus infantis SK1302]
gi|308117268|gb|EFO54691.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus infantis SK1302]
Length = 223
Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ D+ G++ V L + INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDVPGMIAHVTEALSRFNINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRNCEESIEEIRKIPHLHNVNFFQ 223
>gi|229541128|ref|ZP_04430188.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
coagulans 36D1]
gi|229325548|gb|EEN91223.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
coagulans 36D1]
Length = 220
Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + + +V+ D G + V NIL + INI H + R ++
Sbjct: 126 GGGKIEVTELNGFELHLSGHHPAVLVVHQDRYGAIAAVSNILSAHEINIGHMEVSRKEAG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D ++ ++V+E++ I V
Sbjct: 186 KMALMAIEVDQNLDDAVIEEMKRLPNITQV 215
>gi|116754525|ref|YP_843643.1| D-3-phosphoglycerate dehydrogenase [Methanosaeta thermophila PT]
gi|116665976|gb|ABK15003.1| D-3-phosphoglycerate dehydrogenase [Methanosaeta thermophila PT]
Length = 523
Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 43/97 (44%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V+ R ++I + V ++ +++ D I+ V +LGE INI H+GR
Sbjct: 427 VYRPDDRRIVQINDYRVHVPTEGNLVLVLHEDRPNIIGPVCVVLGEANINIGSMHVGRIS 486
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ + + L +D + + ++++ + ++
Sbjct: 487 AGKPQLMVLNVDTPLDDETMKRILSVSGVLSARRISM 523
>gi|331267214|ref|YP_004326844.1| L-serine dehydratase, iron-sulfur-dependent,beta subunit
[Streptococcus oralis Uo5]
gi|326683886|emb|CBZ01504.1| L-serine dehydratase, iron-sulfur-dependent,beta subunit
[Streptococcus oralis Uo5]
Length = 223
Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ D+ G++ V L + INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDVPGMIAHVTEALSRFDINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D ++++ + V F+
Sbjct: 190 EKAIMIIEVDSRSCEEAIKEIRKIPHLHNVNFFK 223
>gi|320105785|ref|YP_004181375.1| D-3-phosphoglycerate dehydrogenase [Terriglobus saanensis SP1PR4]
gi|319924306|gb|ADV81381.1| D-3-phosphoglycerate dehydrogenase [Terriglobus saanensis SP1PR4]
Length = 537
Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V PR + I+ + + ++ I N D+ G++ +G ILGE +N+A+F LGR+
Sbjct: 428 VLHGNSPRLLSYDGIDIEAPLTGTLLSIRNQDVPGVIGRIGTILGEQKVNVANFALGRNV 487
Query: 61 ST-----EHAISFLCIDGSI---LNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + ID SVLE L I V+ E
Sbjct: 488 RSQRVPQGQALAVVQIDLPAAAKAQSVLEALRKVEAIVSVRLVEL 532
>gi|228987333|ref|ZP_04147453.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229157724|ref|ZP_04285799.1| L-serine dehydratase, beta chain [Bacillus cereus ATCC 4342]
gi|228625681|gb|EEK82433.1| L-serine dehydratase, beta chain [Bacillus cereus ATCC 4342]
gi|228772305|gb|EEM20751.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 220
Score = 90.9 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 127 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D + + V+E++ I V E
Sbjct: 187 RRALMVIETDELLADKVIEEIKAQQNICQVTIME 220
>gi|55821319|ref|YP_139761.1| L-serine dehydratase subunit beta [Streptococcus thermophilus LMG
18311]
gi|55823231|ref|YP_141672.1| L-serine dehydratase subunit beta [Streptococcus thermophilus
CNRZ1066]
gi|55737304|gb|AAV60946.1| L-serine dehydratase beta subunit [Streptococcus thermophilus LMG
18311]
gi|55739216|gb|AAV62857.1| L-serine dehydratase beta subunit [Streptococcus thermophilus
CNRZ1066]
Length = 237
Score = 90.9 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ ++ + + IV+ D+ G+V V +IL YGINIA + R +
Sbjct: 144 GGGNIQVTELNGFAVNLKMNTPTLIIVHQDVPGMVALVTDILSRYGINIAQMTVTRENAG 203
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + + ++ + V F
Sbjct: 204 EKAIMIIEVDSHQCDEAVADIARIPNLHNVNFFS 237
>gi|47568200|ref|ZP_00238904.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus G9241]
gi|47555190|gb|EAL13537.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus G9241]
Length = 219
Score = 90.9 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 126 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D + + V+E++ I V E
Sbjct: 186 RRALMVIETDELLADKVIEEIKAQQNICQVTIME 219
>gi|29377199|ref|NP_816353.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis V583]
gi|29344665|gb|AAO82423.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis V583]
Length = 222
Score = 90.9 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 41/93 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G +V+ D+ G++ V NIL INI+ + R
Sbjct: 129 GGGNIQISELNGFKLSLSMGTPTFIVVHQDVPGMIAKVTNILSASDINISTMTVTRESKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E AI + +D + + ++ +L+ I V F
Sbjct: 189 EKAIMIIEVDQAEVGDIVMQLAEIPHIYSVNYF 221
>gi|229918592|ref|YP_002887238.1| L-serine dehydratase, iron-sulfur-dependent, subunit beta
[Exiguobacterium sp. AT1b]
gi|229470021|gb|ACQ71793.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Exiguobacterium sp. AT1b]
Length = 220
Score = 90.9 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 36/90 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ + G + +++ D G + V +L + +NI H + R +
Sbjct: 126 GGGTIEITELNGFPLKLTGGGPALVVLHHDRFGAIAAVTGVLANHQLNIGHMEVSRHEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ + ID +I V+ +L I +
Sbjct: 186 MQALMAIEIDETIPAEVIAELERLPQIERI 215
>gi|171778580|ref|ZP_02919707.1| hypothetical protein STRINF_00559 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282803|gb|EDT48227.1| hypothetical protein STRINF_00559 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 223
Score = 90.9 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ + + + + IV+ DI G++ V +IL E+ INIA ++ R ++
Sbjct: 130 GGGNIEVTELNGFSVSLKMNTPTLIIVHQDIPGMIAKVTDILSEHNINIAQMNVTRERAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E AI + +D + +E++ + V
Sbjct: 190 EKAIMIIEVDSRDCHKAVEQIQHIPHLHNV 219
>gi|295113664|emb|CBL32301.1| L-serine ammonia-lyase [Enterococcus sp. 7L76]
gi|323481644|gb|ADX81083.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis 62]
Length = 222
Score = 90.9 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 41/93 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G +V+ D+ G++ V NIL INI+ + R
Sbjct: 129 GGGNIQISELNGFKLSLSMGTPTFIVVHQDVPGMIAKVTNILSASDINISTMTVTRESKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E AI + +D + + ++ +L+ I V F
Sbjct: 189 EKAIMIIEVDQAEVGDIVMQLAEIPHIYSVNYF 221
>gi|326791739|ref|YP_004309560.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium lentocellum DSM 5427]
gi|326542503|gb|ADZ84362.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium lentocellum DSM 5427]
Length = 226
Score = 90.5 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 34/94 (36%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I + + + DI G V + ++ E INIA L RSQ
Sbjct: 127 GGGLVEIHEINGNKVQITGEYPTVITCHNDIPGTVAKISSLFYEKQINIAFMKLVRSQKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A +D SI ++ ++ I V
Sbjct: 187 KGATMTFEVDHSIPEDIISEIKNVDGINRVIVIN 220
>gi|327441099|dbj|BAK17464.1| L-serine deaminase [Solibacillus silvestris StLB046]
Length = 220
Score = 90.5 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 40/94 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + G I +V+ D G + V N L + +NI H + R +
Sbjct: 126 GGGKIEISEVNGFKLRLTGGMPAILVVHDDRAGCIANVANCLAMHDVNIGHMEVSRIERG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + +D +I +LE++S I V +
Sbjct: 186 LTALMVIEVDQNIDKRLLEQISYIPHITKVSKIN 219
>gi|306828715|ref|ZP_07461907.1| L-serine ammonia-lyase beta subunit [Streptococcus mitis ATCC 6249]
gi|304428893|gb|EFM31981.1| L-serine ammonia-lyase beta subunit [Streptococcus mitis ATCC 6249]
Length = 223
Score = 90.5 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ DI G++ V L + INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIAHVTEALSRFDINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRSCEEAIEEIRKIPHLHNVNFFK 223
>gi|302546895|ref|ZP_07299237.1| phosphoglycerate dehydrogenase [Streptomyces hygroscopicus ATCC
53653]
gi|302464513|gb|EFL27606.1| phosphoglycerate dehydrogenase [Streptomyces himastatinicus ATCC
53653]
Length = 529
Score = 90.5 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 43/93 (46%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
+ + + + D+ + +I + D G+V VG++LGE G+NIA + RS
Sbjct: 436 NIQKIVSVGQHTIDLAVSDHLIFLRYKDRPGVVGTVGHVLGEAGLNIAGMQVSRSVPGGE 495
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
++ L +D ++ VL +++ F +
Sbjct: 496 TLAVLNVDSNVPADVLNEIAQETDATFARSVSL 528
>gi|270291918|ref|ZP_06198133.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus sp. M143]
gi|270279446|gb|EFA25288.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus sp. M143]
Length = 223
Score = 90.5 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ DI G++ V L + INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIAHVTEALSRFDINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRSCEEAIEEIRKIPHLHNVNFFK 223
>gi|306826074|ref|ZP_07459410.1| L-serine ammonia-lyase beta subunit [Streptococcus sp. oral taxon
071 str. 73H25AP]
gi|304431790|gb|EFM34770.1| L-serine ammonia-lyase beta subunit [Streptococcus sp. oral taxon
071 str. 73H25AP]
Length = 223
Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ D+ G++ V L + INIA ++ R +
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDVPGMIAHVTEALSRFDINIAQMNVTREKVG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRSCEEAIEEIRKIPHLHNVNFFK 223
>gi|225443272|ref|XP_002273552.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 624
Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG PR + + DV + +I D G++ VGNILGE +N++ +GR+
Sbjct: 531 DGIPRLTCVGSFSVDVSLEGNLILCRQVDQPGMIGRVGNILGECNVNVSFMSVGRTVKRT 590
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D L+K+ I
Sbjct: 591 RAIMAIGVDEEPDKDTLKKIGEVPAI 616
>gi|57234596|ref|YP_181341.1| D-3-phosphoglycerate dehydrogenase [Dehalococcoides ethenogenes
195]
gi|57225044|gb|AAW40101.1| D-3-phosphoglycerate dehydrogenase [Dehalococcoides ethenogenes
195]
Length = 526
Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 5 GKPRFIKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G +++ + D+ G + + D G++ G I G+ INI++ HL R ++
Sbjct: 433 GDVHIVRLNDYWIDIVPTGGYFLFADHIDRPGLIGAAGKITGDADINISYMHLSRQKARG 492
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + ++L ++ V+ +
Sbjct: 493 QALMILALDEPLPEKQRQQLLSLPDVQTVQVVKI 526
>gi|218899301|ref|YP_002447712.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus G9842]
gi|228902650|ref|ZP_04066801.1| L-serine dehydratase, beta chain [Bacillus thuringiensis IBL 4222]
gi|228909972|ref|ZP_04073793.1| L-serine dehydratase, beta chain [Bacillus thuringiensis IBL 200]
gi|228967179|ref|ZP_04128215.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
sotto str. T04001]
gi|218545365|gb|ACK97759.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus G9842]
gi|228792548|gb|EEM40114.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228849807|gb|EEM94640.1| L-serine dehydratase, beta chain [Bacillus thuringiensis IBL 200]
gi|228857091|gb|EEN01600.1| L-serine dehydratase, beta chain [Bacillus thuringiensis IBL 4222]
Length = 220
Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 39/90 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL + INI+ + R +
Sbjct: 127 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIAAVASILATHEINISTMSVSRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ + D + + V+E++ I V
Sbjct: 187 RRALMVIETDELLADEVIEEIKAQQNICQV 216
>gi|251778424|ref|ZP_04821344.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243082739|gb|EES48629.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 228
Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 34/94 (36%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + D+ G++ V +IL + IN+A + R+
Sbjct: 129 GGGNIQISEVNGNPVEFTGNYETLIVSQRDLPGVIHSVTSILSKENINVAFMKVFRNHKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A +D + + ++ + V
Sbjct: 189 KDATMIFEMDNKVSEKAIREIEKLELVHRVISIS 222
>gi|228992883|ref|ZP_04152808.1| L-serine dehydratase, beta chain [Bacillus pseudomycoides DSM
12442]
gi|228998928|ref|ZP_04158512.1| L-serine dehydratase, beta chain [Bacillus mycoides Rock3-17]
gi|229006459|ref|ZP_04164114.1| L-serine dehydratase, beta chain [Bacillus mycoides Rock1-4]
gi|228754792|gb|EEM04182.1| L-serine dehydratase, beta chain [Bacillus mycoides Rock1-4]
gi|228760844|gb|EEM09806.1| L-serine dehydratase, beta chain [Bacillus mycoides Rock3-17]
gi|228766932|gb|EEM15570.1| L-serine dehydratase, beta chain [Bacillus pseudomycoides DSM
12442]
Length = 220
Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 127 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIASVASILAKHEINISTMSVSRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ + D + + V+E++ I V
Sbjct: 187 RRALMVIETDELLADEVIEEIKGQSNICQV 216
>gi|297559156|ref|YP_003678130.1| D-3-phosphoglycerate dehydrogenase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296843604|gb|ADH65624.1| D-3-phosphoglycerate dehydrogenase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 529
Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 43/91 (47%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I ++ + M+ + D G+V VG +LG+ G+NIA + R Q A+
Sbjct: 438 KLVEINNYTMEIGLAEHMVFLSYEDRPGVVGTVGALLGDAGVNIAGMQVIRDQEGGKALI 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
L +D ++ + L +S + +Q +
Sbjct: 498 ALTVDSAVPDETLASISAEIDADISRQVDLE 528
>gi|296131563|ref|YP_003638810.1| D-3-phosphoglycerate dehydrogenase [Thermincola sp. JR]
gi|296030141|gb|ADG80909.1| D-3-phosphoglycerate dehydrogenase [Thermincola potens JR]
Length = 523
Score = 90.1 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 47/97 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + PR I+I + DV ++ + + D I+ V NI+GE INIA +GR +
Sbjct: 427 LFGEDDPRIIQIDQFRIDVVPEGNILFVPHIDKPKIIGPVANIIGENNINIAGMQVGRKE 486
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + + +L +++ + V+
Sbjct: 487 IGGKAVMMLAVDTPLPDVLLAEIAKVDGVEEVRMITL 523
>gi|226529328|ref|NP_001147079.1| LOC100280688 [Zea mays]
gi|195607108|gb|ACG25384.1| D-3-phosphoglycerate dehydrogenase [Zea mays]
Length = 624
Score = 90.1 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 39/93 (41%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G P + DV + +I D G++ VGNILG+ +NI +GR+ +
Sbjct: 532 GVPHLTLVGPYEVDVSLEGNLILCRQIDQPGMIGKVGNILGDTNVNINFMSVGRTFRGKQ 591
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI + +D LEK+ + I E
Sbjct: 592 AIMAIGVDEEPDKDTLEKIGAILAIEEFVFLEL 624
>gi|30264215|ref|NP_846592.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. Ames]
gi|47529658|ref|YP_021007.1| l-serine dehydratase, iron-sulfur-dependent subunit beta [Bacillus
anthracis str. 'Ames Ancestor']
gi|49187045|ref|YP_030297.1| L-serine dehydratase, iron-sulfur-dependent subunit beta [Bacillus
anthracis str. Sterne]
gi|65321531|ref|ZP_00394490.1| COG1760: L-serine deaminase [Bacillus anthracis str. A2012]
gi|165871165|ref|ZP_02215815.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. A0488]
gi|167633586|ref|ZP_02391910.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. A0442]
gi|167639533|ref|ZP_02397804.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. A0193]
gi|170687245|ref|ZP_02878463.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. A0465]
gi|170705645|ref|ZP_02896108.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. A0389]
gi|177652723|ref|ZP_02935139.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. A0174]
gi|190565839|ref|ZP_03018758.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis Tsiankovskii-I]
gi|227816918|ref|YP_002816927.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. CDC 684]
gi|229600693|ref|YP_002868438.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. A0248]
gi|254683905|ref|ZP_05147765.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. CNEVA-9066]
gi|254736253|ref|ZP_05193959.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. Western North America USA6153]
gi|254744142|ref|ZP_05201825.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. Kruger B]
gi|254754076|ref|ZP_05206111.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. Vollum]
gi|254758232|ref|ZP_05210259.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. Australia 94]
gi|30258860|gb|AAP28078.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. Ames]
gi|47504806|gb|AAT33482.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. 'Ames Ancestor']
gi|49180972|gb|AAT56348.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. Sterne]
gi|164713084|gb|EDR18611.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. A0488]
gi|167512592|gb|EDR87967.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. A0193]
gi|167530992|gb|EDR93679.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. A0442]
gi|170129185|gb|EDS98049.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. A0389]
gi|170668862|gb|EDT19607.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. A0465]
gi|172082058|gb|EDT67126.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. A0174]
gi|190562758|gb|EDV16724.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis Tsiankovskii-I]
gi|227006591|gb|ACP16334.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. CDC 684]
gi|229265101|gb|ACQ46738.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
anthracis str. A0248]
Length = 219
Score = 90.1 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL + INI+ + R +
Sbjct: 126 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIAAVASILAKQEINISTMSVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D + + V+E++ I V E
Sbjct: 186 RRALMVIETDEILADEVIEEIKAQQNICQVTIME 219
>gi|322378113|ref|ZP_08052599.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus sp. M334]
gi|321280950|gb|EFX57964.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus sp. M334]
Length = 223
Score = 90.1 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 43/94 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ DI G++ V L Y INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYDINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK 223
>gi|288906424|ref|YP_003431646.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus gallolyticus UCN34]
gi|306832461|ref|ZP_07465613.1| L-serine ammonia-lyase beta subunit [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|325979486|ref|YP_004289202.1| L-serine dehydratase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288733150|emb|CBI14731.1| putative L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus gallolyticus UCN34]
gi|304425361|gb|EFM28481.1| L-serine ammonia-lyase beta subunit [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|325179414|emb|CBZ49458.1| L-serine dehydratase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 223
Score = 90.1 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ + + + + IV+ DI G++ V +IL E+ INIA ++ R ++
Sbjct: 130 GGGNIEVTELNGFSVSLKMNTPTLIIVHQDIPGMIAKVTDILSEHHINIAQMNVTRERAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E AI + +D + +E++ + V
Sbjct: 190 EKAIMIIEVDSRDCHKAVEQIQQIPHLHNV 219
>gi|125561721|gb|EAZ07169.1| hypothetical protein OsI_29415 [Oryza sativa Indica Group]
Length = 621
Score = 90.1 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 38/93 (40%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G P + DV + +I D G++ VGNILG+ +NI+ +GR+ +
Sbjct: 529 GVPHLTVVGPYEVDVSLEGNLILCRQIDQPGMIGKVGNILGQTNVNISFMSVGRTFRGKQ 588
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI + +D LE + I E
Sbjct: 589 AIMAIGVDEEPDKETLEHIGHIPAIEEFVFLEL 621
>gi|42408279|dbj|BAD09434.1| putative phosphoglycerate dehydrogenase [Oryza sativa Japonica
Group]
gi|42409460|dbj|BAD09817.1| putative phosphoglycerate dehydrogenase [Oryza sativa Japonica
Group]
gi|215769351|dbj|BAH01580.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 621
Score = 90.1 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 38/93 (40%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G P + DV + +I D G++ VGNILG+ +NI+ +GR+ +
Sbjct: 529 GVPHLTVVGPYEVDVSLEGNLILCRQIDQPGMIGKVGNILGQTNVNISFMSVGRTFRGKQ 588
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI + +D LE + I E
Sbjct: 589 AIMAIGVDEEPDKETLEHIGHIPAIEEFVFLEL 621
>gi|302837628|ref|XP_002950373.1| hypothetical protein VOLCADRAFT_60404 [Volvox carteri f.
nagariensis]
gi|300264378|gb|EFJ48574.1| hypothetical protein VOLCADRAFT_60404 [Volvox carteri f.
nagariensis]
Length = 539
Score = 90.1 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ G+P KI + ++ +G ++ D GIV VG +L + +NI+ + R+
Sbjct: 439 AGGQPFLTKIGNFDVELAMGGSVLLTRQRDQPGIVGGVGMLLAKDQVNISFMTVCRTAKH 498
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
AI + ID L ++ + V F+
Sbjct: 499 REAIMAIGIDSEPSLETLAAITEVPGVMEVTVFK 532
>gi|188590655|ref|YP_001922237.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum E3 str. Alaska E43]
gi|188500936|gb|ACD54072.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum E3 str. Alaska E43]
Length = 228
Score = 90.1 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 34/94 (36%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + D+ G++ V +IL + IN+A + R+
Sbjct: 129 GGGNIQISEVNGNPVEFTGNYETLIVSQRDLPGVIHSVTSILSKENINVAFMKVFRNHKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A +D + + ++ + V
Sbjct: 189 KDATMIFEMDNKVSEKAIREIEKLELVHRVISIS 222
>gi|319940181|ref|ZP_08014534.1| L-serine dehydratase [Streptococcus anginosus 1_2_62CV]
gi|319810652|gb|EFW06982.1| L-serine dehydratase [Streptococcus anginosus 1_2_62CV]
Length = 223
Score = 90.1 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I IV+ D+ G++ V L Y INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTIIIVHQDVPGMIAHVTEALSRYNINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRSCEGAIEEIRKIPKLHNVNFFK 223
>gi|224476337|ref|YP_002633943.1| putative L-serine dehydratase subunit beta [Staphylococcus carnosus
subsp. carnosus TM300]
gi|222420944|emb|CAL27758.1| putative L-serine dehydratase, beta subunit [Staphylococcus
carnosus subsp. carnosus TM300]
Length = 221
Score = 90.1 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 34/90 (37%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I + V + + + D G + V NIL IN+ + R +
Sbjct: 126 GGGKIEITAINDFPISVSGDYPALLVFHQDTFGTIARVTNILLNESINVGAMQVNRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ +D ++LE++ + V
Sbjct: 186 DSALMMCELDEKPPITILEEMRQIDGVTDV 215
>gi|229117636|ref|ZP_04247007.1| L-serine dehydratase, beta chain [Bacillus cereus Rock1-3]
gi|228665815|gb|EEL21286.1| L-serine dehydratase, beta chain [Bacillus cereus Rock1-3]
Length = 220
Score = 90.1 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 127 GGGKIEVVELNGFDLQLTGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ + D + + V+E++ I V
Sbjct: 187 RRALMVIETDELLADEVIEEIKGQQNICQV 216
>gi|255538186|ref|XP_002510158.1| d-3-phosphoglycerate dehydrogenase, putative [Ricinus communis]
gi|223550859|gb|EEF52345.1| d-3-phosphoglycerate dehydrogenase, putative [Ricinus communis]
Length = 598
Score = 90.1 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 39/86 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+GKP + DV + +I D G++ VG+ILGE +N++ +GR +
Sbjct: 505 EGKPHLTMVGSFGVDVSLEGSLILCRQIDQPGMIGKVGSILGEENVNVSFMTVGRIAPRK 564
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +D L+++ +
Sbjct: 565 QAVMTIGVDEEPNKEALKRIGEIPLV 590
>gi|322391186|ref|ZP_08064658.1| L-serine ammonia-lyase beta subunit [Streptococcus peroris ATCC
700780]
gi|321145939|gb|EFX41328.1| L-serine ammonia-lyase beta subunit [Streptococcus peroris ATCC
700780]
Length = 223
Score = 90.1 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ D+ G++ V L + INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDVPGMIAHVTEALSRFDINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRNCEESIEEIRKIPHLHNVNFFK 223
>gi|225428898|ref|XP_002285358.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 595
Score = 90.1 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG+ILGE +N++ +GR +
Sbjct: 502 DGIPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGKVGSILGEENVNVSFMSVGRVAPRK 561
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
HA+ + +D L+K+ +
Sbjct: 562 HAVMAIGVDEQPSKVTLKKIGEIPAV 587
>gi|290968021|ref|ZP_06559570.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Megasphaera genomosp. type_1 str. 28L]
gi|290781927|gb|EFD94506.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Megasphaera genomosp. type_1 str. 28L]
Length = 219
Score = 90.1 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +I + + V+ D+ GI+ IL IN+++ + RS
Sbjct: 124 GGGKIEIREINGAQVSLRGEEHTLITVHRDLPGIIAQATTILAIGHINVSNMRVFRSGKN 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ +C D + ++ + I V
Sbjct: 184 AAAVMIVCTDSPVPADMVAMIRKIEAIESVVTL 216
>gi|229031786|ref|ZP_04187775.1| L-serine dehydratase, beta chain [Bacillus cereus AH1271]
gi|228729532|gb|EEL80520.1| L-serine dehydratase, beta chain [Bacillus cereus AH1271]
Length = 220
Score = 90.1 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 127 GGGKIEVVELNGFDLQLTGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D + + V+E+++ I V E
Sbjct: 187 RRALMVIETDELLADEVIEEINAQQNICQVTIME 220
>gi|116628041|ref|YP_820660.1| L-serine dehydratase beta subunit [Streptococcus thermophilus
LMD-9]
gi|116101318|gb|ABJ66464.1| L-serine ammonia-lyase [Streptococcus thermophilus LMD-9]
Length = 223
Score = 90.1 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ ++ + + IV+ D+ G+V V +IL YGINIA + R +
Sbjct: 130 GGGNIQVTELNGFAVNLKMNTPTLIIVHQDVPGMVALVTDILSRYGINIAQMTVTRENAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + + ++ + V F
Sbjct: 190 EKAIMIIEVDSHQCDEAVADIARIPNLHNVNFFS 223
>gi|257790707|ref|YP_003181313.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Eggerthella lenta DSM 2243]
gi|257474604|gb|ACV54924.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Eggerthella lenta DSM 2243]
Length = 536
Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 36/93 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G KI +I+ + I + D G++ + + + G+NIA + R +
Sbjct: 128 GGGAAVIRKIDDIDVRITGESTSIVVRQRDETGVLAHIAQSISDEGVNIATTRMYRERKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + L D + + + + I V+
Sbjct: 188 DIAYTVLETDQEVDGAAKAAIEDHPAILDVRVI 220
>gi|289432486|ref|YP_003462359.1| D-3-phosphoglycerate dehydrogenase [Dehalococcoides sp. GT]
gi|288946206|gb|ADC73903.1| D-3-phosphoglycerate dehydrogenase [Dehalococcoides sp. GT]
Length = 526
Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 5 GKPRFIKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G +K+ + D+ G + + D G++ G I G+ INI++ HL R ++
Sbjct: 433 GDVHIVKLNDYWIDIVPTGGYFLFADHIDRPGLIGSAGKITGDADINISYMHLSRQKARG 492
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + ++L ++ V+ +
Sbjct: 493 QALMILALDEPLPEKQRQQLLSLPDVQMVQVVKI 526
>gi|322388419|ref|ZP_08062022.1| L-serine ammonia-lyase beta subunit [Streptococcus infantis ATCC
700779]
gi|321140732|gb|EFX36234.1| L-serine ammonia-lyase beta subunit [Streptococcus infantis ATCC
700779]
Length = 223
Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ D+ G++ V L + INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAVSLNMNTPTIIIVHQDVPGMIAHVTEALSRFDINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRNCEESIEEIRKIPHLHNVNFFQ 223
>gi|239982472|ref|ZP_04704996.1| D-3-phosphoglycerate dehydrogenase [Streptomyces albus J1074]
gi|291454320|ref|ZP_06593710.1| D-3-phosphoglycerate dehydrogenase [Streptomyces albus J1074]
gi|291357269|gb|EFE84171.1| D-3-phosphoglycerate dehydrogenase [Streptomyces albus J1074]
Length = 533
Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 45/90 (50%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I E + D+ + M+ + D G+V VG +LGE G+NI + R+ A++
Sbjct: 442 KIVAIGEHDVDLSLADHMVVLRYEDRPGVVGTVGRVLGESGVNIGGMQVSRATVGGEALA 501
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D ++ +VL +L+ + + +
Sbjct: 502 VLTVDDTVSQAVLTELAEEIGASVARSVDL 531
>gi|289642877|ref|ZP_06475013.1| D-3-phosphoglycerate dehydrogenase [Frankia symbiont of Datisca
glomerata]
gi|289507354|gb|EFD28317.1| D-3-phosphoglycerate dehydrogenase [Frankia symbiont of Datisca
glomerata]
Length = 529
Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 39/91 (42%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ I + D+ + D G+V VG +LGE INIA + R ++ A+
Sbjct: 437 KVTAIDDFEVDIRPQAHLAFFRYEDRPGVVGAVGALLGEAQINIAGAQVSRRKAGGEALM 496
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
L +D ++ VL +++ + + +
Sbjct: 497 SLSLDDTVPVDVLTEIAKIIGASAARSVSLH 527
>gi|147669219|ref|YP_001214037.1| D-3-phosphoglycerate dehydrogenase [Dehalococcoides sp. BAV1]
gi|146270167|gb|ABQ17159.1| D-3-phosphoglycerate dehydrogenase [Dehalococcoides sp. BAV1]
Length = 526
Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 5 GKPRFIKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G +K+ + D+ G + + D G++ G I G+ INI++ HL R ++
Sbjct: 433 GDVHIVKLNDYWIDIVPTGGYFLFADHIDRPGLIGSAGKITGDADINISYMHLSRQKARG 492
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + ++L ++ V+ +
Sbjct: 493 QALMILALDEPLPEKQRQQLLSLPDVQMVQVVKI 526
>gi|168028593|ref|XP_001766812.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682021|gb|EDQ68443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 565
Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P ++ + DV + +I D G++ VG+ILGE +NI+ +GR E
Sbjct: 472 DGVPYLSRVGSFSVDVSLEGSIILYRQVDQPGMIGKVGSILGEENVNISFMSVGRKSPRE 531
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
HA+ + +D + L+KL +
Sbjct: 532 HAVMAIGVDEEPSKATLQKLGDIPAV 557
>gi|73748439|ref|YP_307678.1| D-3-phosphoglycerate dehydrogenase [Dehalococcoides sp. CBDB1]
gi|73660155|emb|CAI82762.1| D-3-phosphoglycerate dehydrogenase [Dehalococcoides sp. CBDB1]
Length = 526
Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 5 GKPRFIKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G +K+ + D+ G + + D G++ G I G+ INI++ HL R ++
Sbjct: 433 GDVHIVKLNDYWIDIVPTGGYFLFADHIDRPGLIGSAGKITGDADINISYMHLSRQKARG 492
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + ++L ++ V+ +
Sbjct: 493 QALMILALDEPLPEKQRQQLLSLPDVQMVQVVKI 526
>gi|320547686|ref|ZP_08041971.1| L-serine dehydratase [Streptococcus equinus ATCC 9812]
gi|320447761|gb|EFW88519.1| L-serine dehydratase [Streptococcus equinus ATCC 9812]
Length = 223
Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ + + + + IV+ DI G++ V +IL E+ INIA ++ R ++
Sbjct: 130 GGGNIEVTELNGFSVSLKMNTPTLIIVHQDIPGMIAKVTDILSEHNINIAQMNVTRERAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E AI + +D + +E++ + V
Sbjct: 190 EKAIMIIEVDSRDCHQAVEQIQHIPHLHNV 219
>gi|326790990|ref|YP_004308811.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium lentocellum DSM 5427]
gi|326541754|gb|ADZ83613.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium lentocellum DSM 5427]
Length = 222
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 39/95 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G K+ + D + I + D G+V + L E+ INIA+ R
Sbjct: 128 GGGAISIDKVNGMEVFFDGEYETLFINHEDRTGVVAHITQCLSEWQINIAYMRSYRQAKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
E A + + D I + VL + N ++++ K+
Sbjct: 188 EVASTIIETDQPICDEVLAAIMENSSVQYAKKINL 222
>gi|314936177|ref|ZP_07843524.1| phosphoglycerate dehydrogenase [Staphylococcus hominis subsp.
hominis C80]
gi|313654796|gb|EFS18541.1| phosphoglycerate dehydrogenase [Staphylococcus hominis subsp.
hominis C80]
Length = 531
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 40/92 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V R ++I + + D + D+ G+V G +LG++ INIA LGRS
Sbjct: 433 VIDGFGARIVRINDYSVDFKPNTYQFISYHKDLPGMVGLTGQLLGKHDINIASMSLGRSS 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID I V+++L +
Sbjct: 493 EGGQAMMILSIDQPITQQVIKELYEIGDFDNI 524
>gi|317488582|ref|ZP_07947127.1| serine dehydratase subunit alpha [Eggerthella sp. 1_3_56FAA]
gi|325831988|ref|ZP_08165085.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Eggerthella sp. HGA1]
gi|316912324|gb|EFV33888.1| serine dehydratase subunit alpha [Eggerthella sp. 1_3_56FAA]
gi|325486309|gb|EGC88761.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Eggerthella sp. HGA1]
Length = 536
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 36/93 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G KI +I+ + I + D G++ + + + G+NIA + R +
Sbjct: 128 GGGAAVIRKIDDIDVRITGESTSIVVRQRDETGVLAHIAQSISDEGVNIATTRMYRERKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + L D + + + + I V+
Sbjct: 188 DIAYTVLETDQEVDGAAKAAIEDHPAILDVRVI 220
>gi|15672812|ref|NP_266986.1| beta-subunit of L-serine dehydratase [Lactococcus lactis subsp.
lactis Il1403]
gi|12723754|gb|AAK04928.1|AE006316_9 beta-subunit of L-serine dehydratase [Lactococcus lactis subsp.
lactis Il1403]
gi|326406375|gb|ADZ63446.1| L-serine dehydratase subunit beta [Lactococcus lactis subsp. lactis
CV56]
Length = 223
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 44/94 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + G +++ D+ G++ V ++L E+ INIA ++ R
Sbjct: 130 GGGMIQVTELNGFDIAISAGVPTFVVIHEDVPGMIARVSSVLSEHQINIAQMNVTREAKG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI L +D + V+E++ + + V F
Sbjct: 190 EKAIMILEVDTPNVKEVIEEMKLIPRLHAVNFFN 223
>gi|226226235|ref|YP_002760341.1| L-serine dehydratase beta chain [Gemmatimonas aurantiaca T-27]
gi|226089426|dbj|BAH37871.1| L-serine dehydratase beta chain [Gemmatimonas aurantiaca T-27]
Length = 222
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 34/90 (37%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ +I +V I +V D+ G + + +L + +NIA L R +
Sbjct: 125 GAGRVLVTEIDGYPVEVPGNSDTIVLVAEDVKGSIARIAGLLADAQLNIATLKLTRKERG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A + +D V + + +++
Sbjct: 185 GDAFMVIEVDERPNEEVRDAIRALGWVKWA 214
>gi|313892402|ref|ZP_07825993.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Dialister microaerophilus UPII 345-E]
gi|329121934|ref|ZP_08250547.1| L-serine ammonia-lyase beta subunit [Dialister micraerophilus DSM
19965]
gi|313119163|gb|EFR42364.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Dialister microaerophilus UPII 345-E]
gi|327467380|gb|EGF12879.1| L-serine ammonia-lyase beta subunit [Dialister micraerophilus DSM
19965]
Length = 220
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ + +I I+ ++ + + D+ GIV V L + INI++ + R +
Sbjct: 124 GGGRIKITEIDGISVEITGEEYTLITNHYDVPGIVAAVSLRLANHNINISNMRVFRKKKG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSV-NVTIRFV 92
+A+ + D + S++++L N I+ V
Sbjct: 184 LNAVMIVHTDQEVPESMIKELVDCNKNIKRV 214
>gi|229086711|ref|ZP_04218878.1| L-serine dehydratase, beta chain [Bacillus cereus Rock3-44]
gi|228696585|gb|EEL49403.1| L-serine dehydratase, beta chain [Bacillus cereus Rock3-44]
Length = 219
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 126 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIASVASILAKHEINISTMSVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ + D + N V+E++ I V
Sbjct: 186 RKALMVIETDQLLANEVIEEIKGQSNICQV 215
>gi|229098610|ref|ZP_04229550.1| L-serine dehydratase, beta chain [Bacillus cereus Rock3-29]
gi|229104745|ref|ZP_04235406.1| L-serine dehydratase, beta chain [Bacillus cereus Rock3-28]
gi|228678618|gb|EEL32834.1| L-serine dehydratase, beta chain [Bacillus cereus Rock3-28]
gi|228684689|gb|EEL38627.1| L-serine dehydratase, beta chain [Bacillus cereus Rock3-29]
Length = 214
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 121 GGGKIEVVELNGFDLQLTGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 180
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ + D + + V+E++ I V
Sbjct: 181 RRALMVIETDELLADEVIEEIKGQQNICQV 210
>gi|229174817|ref|ZP_04302339.1| L-serine dehydratase, beta chain [Bacillus cereus MM3]
gi|228608680|gb|EEK65980.1| L-serine dehydratase, beta chain [Bacillus cereus MM3]
Length = 220
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 127 GGGKIEVVELNGFDLQLTGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + D + + V+E+++ I V E
Sbjct: 187 RRALMVIETDELLADEVIEEINAQQNICQVTIME 220
>gi|94265987|ref|ZP_01289710.1| Amino acid-binding ACT [delta proteobacterium MLMS-1]
gi|93453453|gb|EAT03869.1| Amino acid-binding ACT [delta proteobacterium MLMS-1]
Length = 221
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 40/97 (41%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF +PR +++ + M+ + D G + +G +G+ G+NI+ +G+
Sbjct: 124 VFGKKEPRLVRLNSFRLEALPQGPMLLVYINDTPGAIGNLGMTIGDAGVNISLMTVGKES 183
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ I L + + +L+K+ + +
Sbjct: 184 ESGQNIILLNTNTLVSRDLLKKVRGLEQVYDAMVLDM 220
>gi|229815478|ref|ZP_04445810.1| hypothetical protein COLINT_02526 [Collinsella intestinalis DSM
13280]
gi|229809011|gb|EEP44781.1| hypothetical protein COLINT_02526 [Collinsella intestinalis DSM
13280]
Length = 538
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 36/95 (37%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R I ++ ++ + + + D G + + L + +NIA R+++
Sbjct: 135 GGGKMRISAINGVHVEISGLYTTLFVAHRDAPGALASLTGALAQAQMNIAFCRTYRTEAG 194
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A S DG+ VL + + + E
Sbjct: 195 GQAYSVFETDGAPQRDVLPIVRALDLVNYATFIEL 229
>gi|52080188|ref|YP_078979.1| L-serine dehydratase subunit beta [Bacillus licheniformis ATCC
14580]
gi|52785565|ref|YP_091394.1| SdaAB [Bacillus licheniformis ATCC 14580]
gi|319646033|ref|ZP_08000263.1| SdaAB protein [Bacillus sp. BT1B_CT2]
gi|52003399|gb|AAU23341.1| L-serine dehydratase (beta chain) [Bacillus licheniformis ATCC
14580]
gi|52348067|gb|AAU40701.1| SdaAB [Bacillus licheniformis ATCC 14580]
gi|317391783|gb|EFV72580.1| SdaAB protein [Bacillus sp. BT1B_CT2]
Length = 220
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 41/93 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ + I +V+ D G + V N+L ++ INI H + R
Sbjct: 126 GGGKIEIIELNGFELRLSGNHPAILVVHNDRYGTIAGVANVLAKFAINIGHMEVARKDVG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ + +D +I +V ++L I V Q
Sbjct: 186 QEALMTIEVDQTIDPAVFDELRALPNIIEVTQI 218
>gi|158320771|ref|YP_001513278.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Alkaliphilus oremlandii OhILAs]
gi|158140970|gb|ABW19282.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Alkaliphilus oremlandii OhILAs]
Length = 223
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 31/96 (32%), Gaps = 1/96 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I + + + + D G++ V +L Y INIA + R
Sbjct: 127 GGGNIVINEINGLEIKFTGEYDTLIVSHTDKPGVIAKVTAVLALYDINIAFMRVYRYTKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSV-NVTIRFVKQFEF 97
++A + D I ++ + +
Sbjct: 187 QNAFMIIETDNEIAPEIVTYIKKTIPEVPQAYLVNI 222
>gi|229075846|ref|ZP_04208822.1| L-serine dehydratase, beta chain [Bacillus cereus Rock4-18]
gi|228707161|gb|EEL59358.1| L-serine dehydratase, beta chain [Bacillus cereus Rock4-18]
Length = 214
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 121 GGGKIEVVELNGFDLQLTGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 180
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ + D + + V+E++ I V
Sbjct: 181 RRALMVIETDELLADEVIEEIKGQQNICQV 210
>gi|302786926|ref|XP_002975234.1| hypothetical protein SELMODRAFT_102593 [Selaginella moellendorffii]
gi|300157393|gb|EFJ24019.1| hypothetical protein SELMODRAFT_102593 [Selaginella moellendorffii]
Length = 629
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P ++ + DV + +I D G++ VG +LG+ +NI+ +GR+ +
Sbjct: 536 DGVPHLSQVGSFSIDVSLEGSVILCRQVDQPGMIGKVGGLLGDENVNISFMSVGRTSPRQ 595
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ + +D VL+K+ + + +
Sbjct: 596 KAVMAIGVDDEPSKEVLQKIGSISAVEELVFLKL 629
>gi|315636539|ref|ZP_07891775.1| phosphoglycerate dehydrogenase [Arcobacter butzleri JV22]
gi|315479188|gb|EFU69885.1| phosphoglycerate dehydrogenase [Arcobacter butzleri JV22]
Length = 528
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+D R I++ DVD MI + N DI G++ VG +LG+ INIA F L R
Sbjct: 433 VFADDVQRVIELDGFAIDVDPKGKMIVMKNKDIPGVIGTVGKLLGDNKINIADFRLSR-G 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ ID + + +++ L V E
Sbjct: 492 KDGIALAIALIDEKVTSEIIKNLDNLEATIAVAYAEI 528
>gi|229163078|ref|ZP_04291034.1| L-serine dehydratase, beta chain [Bacillus cereus R309803]
gi|228620484|gb|EEK77354.1| L-serine dehydratase, beta chain [Bacillus cereus R309803]
Length = 219
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 41/90 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 126 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ + D + + V+E+++ I V
Sbjct: 186 RRALMVIETDELLADEVIEEINAQQNICQV 215
>gi|157738251|ref|YP_001490935.1| D-3-phosphoglycerate dehydrogenase [Arcobacter butzleri RM4018]
gi|157700105|gb|ABV68265.1| D-3-phosphoglycerate dehydrogenase [Arcobacter butzleri RM4018]
Length = 528
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+D R I++ DVD MI + N DI G++ VG +LG+ INIA F L R
Sbjct: 433 VFADDVQRVIELDGFAIDVDPKGKMIVMKNKDIPGVIGTVGKLLGDNKINIADFRLSR-G 491
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ ID + + +++ L V E
Sbjct: 492 KDGIALAIALIDEKVTSEIIKNLDNLEATIAVAYAEI 528
>gi|317050557|ref|YP_004111673.1| D-3-phosphoglycerate dehydrogenase [Desulfurispirillum indicum S5]
gi|316945641|gb|ADU65117.1| D-3-phosphoglycerate dehydrogenase [Desulfurispirillum indicum S5]
Length = 544
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + R I++ E + D + M+ N D G++ V +LGE GINI+HF L R
Sbjct: 447 VFENAMARVIRLDEYDVDFNPEAPMLIFKNQDRNGLIGEVATLLGEAGINISHFALNRHP 506
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E A+ + ++ +L +L+ I
Sbjct: 507 RGETALGVVNTGVAVSAELLTRLNRVPGIMNAWVIR 542
>gi|147823108|emb|CAN68604.1| hypothetical protein VITISV_036580 [Vitis vinifera]
Length = 610
Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG PR + + DV + +I D G++ VGNILGE +N++ +GR+
Sbjct: 517 DGIPRLTCVGSFSVDVSLEGNLILCRQVDQPGMIGRVGNILGECNVNVSFMSVGRTVKRT 576
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D L+K+ I
Sbjct: 577 RAIMAIGVDEEPXKDTLKKIGEVPAI 602
>gi|302785179|ref|XP_002974361.1| hypothetical protein SELMODRAFT_149626 [Selaginella moellendorffii]
gi|300157959|gb|EFJ24583.1| hypothetical protein SELMODRAFT_149626 [Selaginella moellendorffii]
Length = 545
Score = 89.3 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P ++ + DV + +I D G++ VG +LG+ +NI+ +GR+ +
Sbjct: 452 DGVPHLSQVGSFSIDVSLEGSVILCRQVDQPGMIGKVGGLLGDENVNISFMSVGRTSPRQ 511
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ + +D VL+K+ + + +
Sbjct: 512 KAVMAIGVDDEPSKEVLQKIGSISAVEELVFLKL 545
>gi|315221596|ref|ZP_07863516.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus anginosus F0211]
gi|315189430|gb|EFU23125.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus anginosus F0211]
Length = 223
Score = 89.3 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 43/94 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I IV+ D+ G++ V L Y INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFSISLSMNTPTIIIVHQDVPGMIAHVTEALSRYNINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + +E++ + V F+
Sbjct: 190 EKAIMIIEVDSRSCDGAIEEIKKIPKLHNVNFFK 223
>gi|242074584|ref|XP_002447228.1| hypothetical protein SORBIDRAFT_06g030920 [Sorghum bicolor]
gi|241938411|gb|EES11556.1| hypothetical protein SORBIDRAFT_06g030920 [Sorghum bicolor]
Length = 620
Score = 89.3 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG++LGE +N++ +GR +
Sbjct: 527 DGVPHLTKVGAFQVDVSLEGSLILCRQVDQPGMIGSVGSVLGEENVNVSFMSVGRIAPRK 586
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
HA+ + +D + L K+ I
Sbjct: 587 HAVMAIGVDEEPSKATLTKIGEIPAI 612
>gi|152976546|ref|YP_001376063.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus subsp. cytotoxis NVH 391-98]
gi|152025298|gb|ABS23068.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cytotoxicus NVH 391-98]
Length = 220
Score = 89.3 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 127 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIASVASILAKHEINISTMSVSRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ + D ++ N V+E++ I V
Sbjct: 187 RKALMVIETDEALENEVIEEIKEQSNICQV 216
>gi|228941301|ref|ZP_04103854.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228974233|ref|ZP_04134803.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980824|ref|ZP_04141129.1| L-serine dehydratase, beta chain [Bacillus thuringiensis Bt407]
gi|228778993|gb|EEM27255.1| L-serine dehydratase, beta chain [Bacillus thuringiensis Bt407]
gi|228785573|gb|EEM33582.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818460|gb|EEM64532.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 228
Score = 89.3 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 38/90 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL INI+ + R +
Sbjct: 135 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIAAVASILATNEINISTMSVSRKEKG 194
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ + D + + V+E++ I V
Sbjct: 195 RRALMVIETDELLADEVIEEIKAQQNICQV 224
>gi|222640652|gb|EEE68784.1| hypothetical protein OsJ_27507 [Oryza sativa Japonica Group]
Length = 528
Score = 89.3 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 38/93 (40%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G P + DV + +I D G++ VGNILG+ +NI+ +GR+ +
Sbjct: 436 GVPHLTVVGPYEVDVSLEGNLILCRQIDQPGMIGKVGNILGQTNVNISFMSVGRTFRGKQ 495
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
AI + +D LE + I E
Sbjct: 496 AIMAIGVDEEPDKETLEHIGHIPAIEEFVFLEL 528
>gi|281491318|ref|YP_003353298.1| L-serine dehydratase subunit beta [Lactococcus lactis subsp. lactis
KF147]
gi|281375059|gb|ADA64577.1| L-serine dehydratase, beta subunit [Lactococcus lactis subsp.
lactis KF147]
Length = 223
Score = 89.3 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 44/94 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + G +++ D+ G++ V ++L E+ INIA ++ R
Sbjct: 130 GGGMIQVTELNGFDIAISAGVPTFVVIHEDVPGMIARVSSVLSEHQINIAQMNVTREAKG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI L +D + V+E++ + + V F
Sbjct: 190 EKAIMILEVDTPNVKEVIEEMKLIPRLHAVNFFN 223
>gi|326941919|gb|AEA17815.1| L-serine dehydratase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 220
Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 38/90 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL INI+ + R +
Sbjct: 127 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIAAVASILATNEINISTMSVSRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ + D + + V+E++ I V
Sbjct: 187 RRALMVIETDELLADEVIEEIKAQQNICQV 216
>gi|325290434|ref|YP_004266615.1| L-serine ammonia-lyase [Syntrophobotulus glycolicus DSM 8271]
gi|324965835|gb|ADY56614.1| L-serine ammonia-lyase [Syntrophobotulus glycolicus DSM 8271]
Length = 223
Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 37/94 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I + + + I V AD G++ + +L + INIA + R
Sbjct: 127 GGGMIVIREINQFPVEFNGEYPAIVSVYADYPGMIAEITAVLAKASINIAKMKVSREGRG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A++ + D + VL K+ + V E
Sbjct: 187 KRALTVIETDDIVPIEVLGKIRKLAKVEEVIFIE 220
>gi|319790479|ref|YP_004152112.1| D-3-phosphoglycerate dehydrogenase [Thermovibrio ammonificans HB-1]
gi|317114981|gb|ADU97471.1| D-3-phosphoglycerate dehydrogenase [Thermovibrio ammonificans HB-1]
Length = 533
Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 50/97 (51%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V + P+ ++I FD+ ++ I N D+ G++ +G+ILG++ +NIA F LGR +
Sbjct: 437 VMDEKFPKIVEINGFLFDLTPEGKLLLIKNYDVPGVIGKLGSILGKHRVNIAGFQLGRKE 496
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A + ID + +E++ I VKQ
Sbjct: 497 KGKEAKGVILIDDDVPQQAIEEIKEIPEILEVKQVNL 533
>gi|291521648|emb|CBK79941.1| L-serine ammonia-lyase [Coprococcus catus GD/7]
Length = 222
Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 43/94 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R +I + + + +V+ D LG+V + +L +G+NIA L R
Sbjct: 128 GGGKVRISRINNVEVEFTGEYSSVIVVHQDQLGLVAHITAVLSHFGVNIAFMRLFRESKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A + + +DG + + E +S N + V E
Sbjct: 188 QTAYTLVEVDGDLPKGIKEMISDNHYVHDVMIIE 221
>gi|222153940|ref|YP_002563117.1| L-serine dehydratase, beta chain [Streptococcus uberis 0140J]
gi|222114753|emb|CAR43913.1| putative L-serine dehydratase, beta chain [Streptococcus uberis
0140J]
Length = 223
Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 39/90 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + + IV+ DI G++ V +IL INIA ++ R +
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTLIIVHQDIPGMIAKVTDILSANDINIAQMNVTRESAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E AI + +D + ++ + V
Sbjct: 190 EKAIMIIEVDSRNCQDAVNQIERIPNLHNV 219
>gi|302391962|ref|YP_003827782.1| L-serine ammonia-lyase [Acetohalobium arabaticum DSM 5501]
gi|302204039|gb|ADL12717.1| L-serine ammonia-lyase [Acetohalobium arabaticum DSM 5501]
Length = 223
Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 39/94 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I + D+ + ++ D G+V V IL EY +NIA + R
Sbjct: 127 GGGSIVVTEIDGVEVDLTGEYPTLITLHEDKPGVVAKVSAILNEYQLNIAEMKVVRQNKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + +D + S+L K+ ++ VK
Sbjct: 187 TLATAVIGLDYQLDVSILNKIQKVSEVKKVKLVN 220
>gi|254458447|ref|ZP_05071872.1| phosphoglycerate dehydrogenase [Campylobacterales bacterium GD 1]
gi|207084755|gb|EDZ62042.1| phosphoglycerate dehydrogenase [Campylobacterales bacterium GD 1]
Length = 528
Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F DG R + I + +V + MI N+D+ G++ +G+ L +NI+ F L R++
Sbjct: 433 IFDDGVKRIVAIDGFDIEVALKGDMILFKNSDVPGVIGSIGSTLARNNVNISDFSLARNK 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
A++ + +D ++ + L L+ V
Sbjct: 493 DA-EALAVILVDNAVNEATLNALASLEACLSVNY 525
>gi|312898124|ref|ZP_07757516.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Megasphaera micronuciformis F0359]
gi|310620792|gb|EFQ04360.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Megasphaera micronuciformis F0359]
Length = 219
Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 36/90 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +I + + + D GI+ V +L GIN++ + RS
Sbjct: 124 GGGKIEIREINGFEAVLTGEDHTLMTFHHDKPGIIARVSTLLAMKGINVSTMRVFRSGRN 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E A+ + DG + N +E++ + V
Sbjct: 184 ERAVMIIATDGRVPNESVEEIKKIDGVNNV 213
>gi|312866854|ref|ZP_07727067.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus parasanguinis F0405]
gi|311097637|gb|EFQ55868.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus parasanguinis F0405]
Length = 223
Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ D+ G++ V L Y INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAISLNMNTPTIIIVHQDVPGMIAHVTEALSRYDINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + +E + + V F+
Sbjct: 190 EKAIMIIEVDSRSCEAAIEDIRKIPHLHNVNFFK 223
>gi|311068106|ref|YP_003973029.1| L-serine dehydratase subunit beta [Bacillus atrophaeus 1942]
gi|310868623|gb|ADP32098.1| L-serine dehydratase subunit beta [Bacillus atrophaeus 1942]
Length = 220
Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 41/93 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + I +V+ D G + V N+L ++ IN+ H + R
Sbjct: 126 GGGKIEITELNGFELRLSGNHPAILVVHNDKFGTIAGVANVLAKFSINVGHMEVARKDIG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ + +D +I + VL++L I V +
Sbjct: 186 QLALMTIEVDQNIDDDVLDELKKLPNIIQVTKI 218
>gi|291287172|ref|YP_003503988.1| D-3-phosphoglycerate dehydrogenase [Denitrovibrio acetiphilus DSM
12809]
gi|290884332|gb|ADD68032.1| D-3-phosphoglycerate dehydrogenase [Denitrovibrio acetiphilus DSM
12809]
Length = 544
Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF+D R + + D+ + N D GI+ VG ILG++ INIA F L R+
Sbjct: 445 VFADQTGRIVIYDKYYTDLIAEGTFLYFNNLDRPGIIGKVGTILGKHSINIADFDLARNV 504
Query: 61 STE---HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++F+ +D + VL+++ + K F
Sbjct: 505 KEDGEADAVAFVRVDSKVPAGVLDEILALDGMLEAKVITF 544
>gi|315644826|ref|ZP_07897955.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Paenibacillus vortex V453]
gi|315279768|gb|EFU43069.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Paenibacillus vortex V453]
Length = 227
Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 39/90 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +++ + + ++ + + D G+V + +L G+NIA+ + R
Sbjct: 126 GGGSVEMLRVNGFDVKFTMNYPVLLVFHDDTPGMVAHITRLLDGGGVNIAYMDVDRKGRG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A++ + D ++ +++ + ++ V
Sbjct: 186 GDAMTVVESDEAVPVELMKHIEGLPSVHRV 215
>gi|320334181|ref|YP_004170892.1| L-serine dehydratase, iron-sulfur-dependent subunit beta
[Deinococcus maricopensis DSM 21211]
gi|319755470|gb|ADV67227.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Deinococcus maricopensis DSM 21211]
Length = 221
Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 36/93 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +++ + D +GI+ V +++ G+NIA + R +
Sbjct: 123 GGGAIEVVRVDGFRVQFTGASPTLLTRYTDAIGIIARVASLIASDGVNIATLNCTREKRG 182
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ + +D + + + LS + +++
Sbjct: 183 GAAMLSIELDAPLSDEAVRMLSRWPEMAWIRML 215
>gi|223933685|ref|ZP_03625661.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus suis 89/1591]
gi|253752801|ref|YP_003025942.1| putative L-serine dehydratase, beta chain [Streptococcus suis SC84]
gi|253754626|ref|YP_003027767.1| L-serine dehydratase, beta chain [Streptococcus suis P1/7]
gi|253756559|ref|YP_003029699.1| L-serine dehydratase, beta chain [Streptococcus suis BM407]
gi|302024646|ref|ZP_07249857.1| L-serine dehydratase, beta chain [Streptococcus suis 05HAS68]
gi|330833761|ref|YP_004402586.1| L-serine dehydratase subunit beta [Streptococcus suis ST3]
gi|223897638|gb|EEF64023.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus suis 89/1591]
gi|251817090|emb|CAZ52742.1| putative L-serine dehydratase, beta chain [Streptococcus suis SC84]
gi|251819023|emb|CAZ56870.1| putative L-serine dehydratase, beta chain [Streptococcus suis
BM407]
gi|251820872|emb|CAR47638.1| putative L-serine dehydratase, beta chain [Streptococcus suis P1/7]
gi|319759219|gb|ADV71161.1| L-serine dehydratase, beta chain [Streptococcus suis JS14]
gi|329307984|gb|AEB82400.1| L-serine dehydratase, beta chain [Streptococcus suis ST3]
Length = 223
Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 46/94 (48%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + ++++ I IV+ D+ G++ V ++L +Y INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFSVNLNMNTPTIIIVHQDVPGMIAKVTDVLSKYDINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + + ++ + V F
Sbjct: 190 EKAIMIIEVDARQCENSIAEIEKIPHLHNVTFFN 223
>gi|310826937|ref|YP_003959294.1| hypothetical protein ELI_1345 [Eubacterium limosum KIST612]
gi|308738671|gb|ADO36331.1| hypothetical protein ELI_1345 [Eubacterium limosum KIST612]
Length = 222
Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 34/95 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I + + I + D G++ + L + INIA L R +
Sbjct: 128 GGGAAVIREINGVEIALSGEYNTILVKQRDKPGVLAHITRCLSDCQINIAFTKLYREKKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
E A + + D I V+ + + I + E
Sbjct: 188 EIAYTIIETDEEITGEVIAAIEASGNIISATRIEL 222
>gi|146319825|ref|YP_001199537.1| L-serine deaminase [Streptococcus suis 05ZYH33]
gi|146322016|ref|YP_001201727.1| L-serine deaminase [Streptococcus suis 98HAH33]
gi|145690631|gb|ABP91137.1| L-serine deaminase [Streptococcus suis 05ZYH33]
gi|145692822|gb|ABP93327.1| L-serine deaminase [Streptococcus suis 98HAH33]
gi|292559421|gb|ADE32422.1| Probable L-serine dehydratase, beta chain [Streptococcus suis GZ1]
Length = 227
Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 46/94 (48%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + ++++ I IV+ D+ G++ V ++L +Y INIA ++ R ++
Sbjct: 134 GGGNIQVTELNGFSVNLNMNTPTIIIVHQDVPGMIAKVTDVLSKYDINIAQMNVTREKAG 193
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + + ++ + V F
Sbjct: 194 EKAIMIIEVDARQCENSIAEIEKIPHLHNVTFFN 227
>gi|319946004|ref|ZP_08020253.1| L-serine ammonia-lyase beta subunit [Streptococcus australis ATCC
700641]
gi|319747812|gb|EFW00057.1| L-serine ammonia-lyase beta subunit [Streptococcus australis ATCC
700641]
Length = 223
Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ D+ G++ V L Y INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAISLNMNTPTIIIVHQDVPGMIAHVTEALSRYDINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + +E + + V F+
Sbjct: 190 EKAIMIIEVDSRNCDEAIELIRQIPHLHNVNFFQ 223
>gi|304317084|ref|YP_003852229.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778586|gb|ADL69145.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 228
Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 33/94 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I +N + + + D GI+ V +L EY INIA + R
Sbjct: 129 GGGNVVLKEINGMNVEFTGEYETLITKHIDKPGIIAMVTKVLAEYKINIAFMRVYRQLKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++AI + D I V + I
Sbjct: 189 DNAIMVIESDQVIPEDVRISIENINGIERAIVIN 222
>gi|257869767|ref|ZP_05649420.1| L-serine dehydratase [Enterococcus gallinarum EG2]
gi|257803931|gb|EEV32753.1| L-serine dehydratase [Enterococcus gallinarum EG2]
Length = 221
Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G IV+ D+ G+V V N+L E INI + R
Sbjct: 129 GGGNIQISELNGFKISLTLGTPTYVIVHQDVPGMVARVTNLLSEAQINIGTMTVTRESKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E AI + +D + + +++ +
Sbjct: 189 EKAIMIIEVDER-NDQLAQQIKALPHVYSA 217
>gi|322390502|ref|ZP_08064020.1| L-serine ammonia-lyase beta subunit [Streptococcus parasanguinis
ATCC 903]
gi|321142776|gb|EFX38236.1| L-serine ammonia-lyase beta subunit [Streptococcus parasanguinis
ATCC 903]
Length = 230
Score = 88.9 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ D+ G++ V L Y INIA ++ R ++
Sbjct: 137 GGGNIQVTELNGFAISLNMNTPTIIIVHQDVPGMIAHVTEALSRYDINIAQMNVTREKAG 196
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D + ++ + + V F+
Sbjct: 197 EKAIMIIEVDSRSCEAAIDDIRKIPHLHNVNFFK 230
>gi|298204781|emb|CBI25279.3| unnamed protein product [Vitis vinifera]
Length = 432
Score = 88.6 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG PR + + DV + +I D G++ VGNILGE +N++ +GR+
Sbjct: 339 DGIPRLTCVGSFSVDVSLEGNLILCRQVDQPGMIGRVGNILGECNVNVSFMSVGRTVKRT 398
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D L+K+ I
Sbjct: 399 RAIMAIGVDEEPDKDTLKKIGEVPAI 424
>gi|312863760|ref|ZP_07723998.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus vestibularis F0396]
gi|322516529|ref|ZP_08069445.1| L-serine ammonia-lyase beta subunit [Streptococcus vestibularis
ATCC 49124]
gi|311101296|gb|EFQ59501.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus vestibularis F0396]
gi|322124917|gb|EFX96337.1| L-serine ammonia-lyase beta subunit [Streptococcus vestibularis
ATCC 49124]
Length = 223
Score = 88.6 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ ++ + + IV+ D+ G++ V +IL YGINIA + R +
Sbjct: 130 GGGNIQVTELNGFAVNLKMNTPTLIIVHQDVPGMIALVTDILSRYGINIAQMTVTRENAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + ID + + ++ + V F
Sbjct: 190 EKAIMIIEIDSHQCDEAVTDIARIPNLHNVNFFS 223
>gi|119356910|ref|YP_911554.1| D-3-phosphoglycerate dehydrogenase [Chlorobium phaeobacteroides DSM
266]
gi|119354259|gb|ABL65130.1| D-3-phosphoglycerate dehydrogenase [Chlorobium phaeobacteroides DSM
266]
Length = 526
Score = 88.6 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 43/97 (44%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF D + R + I + +I N D G++ V +L + +N+A L R +
Sbjct: 430 VFGDKELRIVMIDRFIVEFKPEGTIIIYNNIDQPGVIAQVTQLLLLHNLNVASIALSRDE 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ AI+ + +DG + ++L+++S +
Sbjct: 490 EKKLAITAIVVDGGVTTTLLDEISTVNGVSDSTLLSL 526
>gi|297832018|ref|XP_002883891.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329731|gb|EFH60150.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 602
Score = 88.6 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 38/86 (44%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG ILGE +N++ +GR +
Sbjct: 509 DGVPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGTVGRILGESNVNVSFMSVGRIAPRK 568
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +D L+K+ +
Sbjct: 569 QAVMAIGVDDMPSKETLKKIGEIPAV 594
>gi|193213940|ref|YP_001995139.1| D-3-phosphoglycerate dehydrogenase [Chloroherpeton thalassium ATCC
35110]
gi|193087417|gb|ACF12692.1| D-3-phosphoglycerate dehydrogenase [Chloroherpeton thalassium ATCC
35110]
Length = 526
Score = 88.6 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 42/96 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V + R + I + + ++ N D G++ VG L + G+NIA L R +
Sbjct: 430 VLGAKELRVVMIDKFLCEFKPEGQILIYNNQDKPGVLARVGMALLKRGLNIASVALSRDE 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A++ + +D ++ VLE + + + +
Sbjct: 490 EKKEALTVISLDDTVDTEVLEDIEKVDGVFSPRLIK 525
>gi|269215713|ref|ZP_06159567.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit [Slackia
exigua ATCC 700122]
gi|269131200|gb|EEZ62275.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit [Slackia
exigua ATCC 700122]
Length = 569
Score = 88.6 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 38/94 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I ++ + + I D G++ + +I+ INIA L R +
Sbjct: 152 GGGAAVITRINGVDVRLTGEFHSVVIRQTDAKGVLAHIASIISACDINIATTRLFREKKG 211
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A + + D I + + L V+ I V+ +
Sbjct: 212 DTAYTIMQTDDEIPAGIADALLVHPDIHDVRIVK 245
>gi|266622161|ref|ZP_06115096.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium hathewayi DSM 13479]
gi|288866139|gb|EFC98437.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium hathewayi DSM 13479]
Length = 222
Score = 88.6 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 40/94 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK R ++I ++ D + +V+ D G+ + +L + +NIA + R
Sbjct: 128 GGGKVRIVRINQVKVDFTGEYSAVIVVHQDKPGVAAHITKVLSDCSVNIAFMRIFREAKG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + D + ++ E L N+ + V +
Sbjct: 188 HTAYTIVESDNRLPGNITETLRENIHVHDVMIVQ 221
>gi|297798490|ref|XP_002867129.1| hypothetical protein ARALYDRAFT_491252 [Arabidopsis lyrata subsp.
lyrata]
gi|297312965|gb|EFH43388.1| hypothetical protein ARALYDRAFT_491252 [Arabidopsis lyrata subsp.
lyrata]
Length = 603
Score = 88.6 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 38/86 (44%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG+ILGE +N+ +GR +
Sbjct: 510 DGVPHLTKVGSFEVDVTLEGSIILCRQVDQPGMIGTVGSILGESNVNVNFMSVGRIAPRK 569
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D L+K+ I
Sbjct: 570 QAIMAIGVDDIPSKDTLKKIGEIPAI 595
>gi|15235282|ref|NP_195146.1| EDA9 (embryo sac development arrest 9); ATP binding [Arabidopsis
thaliana]
gi|2911042|emb|CAA17552.1| Phosphoglycerate dehydrogenase-like protein [Arabidopsis thaliana]
gi|7270370|emb|CAB80137.1| Phosphoglycerate dehydrogenase-like protein [Arabidopsis thaliana]
gi|17380672|gb|AAL36166.1| putative phosphoglycerate dehydrogenase [Arabidopsis thaliana]
gi|23297595|gb|AAN12903.1| putative phosphoglycerate dehydrogenase [Arabidopsis thaliana]
Length = 603
Score = 88.6 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 38/86 (44%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG+ILGE +N+ +GR +
Sbjct: 510 DGVPHLTKVGSFEVDVTLEGSIILCRQVDQPGMIGTVGSILGESNVNVNFMSVGRIAPRK 569
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D L+K+ +
Sbjct: 570 QAIMAIGVDDIPSKETLKKIGEIPAV 595
>gi|158522823|ref|YP_001530693.1| D-3-phosphoglycerate dehydrogenase [Desulfococcus oleovorans Hxd3]
gi|158511649|gb|ABW68616.1| D-3-phosphoglycerate dehydrogenase [Desulfococcus oleovorans Hxd3]
Length = 532
Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRS 59
+F + R ++I + ++ I N D G + +G LG +G+NI +G+
Sbjct: 433 IFGKKEARVVRINDFRLEMIPTKGHFAIIHNLDKPGAIGSIGTTLGTFGVNIERMQVGQQ 492
Query: 60 QSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
T I FL I + L + ++ V FE +
Sbjct: 493 GDTLRNIIFLRTGSRIPDDALAAVKELPLVKDVTVFELD 531
>gi|51535610|dbj|BAD37553.1| putative D-3 [Oryza sativa Japonica Group]
gi|51536377|dbj|BAD37570.1| putative D-3 [Oryza sativa Japonica Group]
Length = 625
Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 40/86 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DGKP + + DV + +I D GI+ VG+ILG+ +N+ +GR+ +
Sbjct: 532 DGKPHLTLVGPFSVDVSLEGNLILCRQVDQPGIIGKVGSILGKMNVNVNFMSVGRTAPGK 591
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D L+ + ++
Sbjct: 592 QAIMAIGVDEEPEKEALKLIGDIPSV 617
>gi|21536501|gb|AAM60833.1| Phosphoglycerate dehydrogenase-like protein [Arabidopsis thaliana]
Length = 603
Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 38/86 (44%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG+ILGE +N+ +GR +
Sbjct: 510 DGVPHLTKVGSFEVDVTLEGSIILCRQVDQPGMIGTVGSILGESNVNVNFMSVGRIAPRK 569
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D L+K+ +
Sbjct: 570 QAIMAIGVDDIPSKETLKKIGEIPAV 595
>gi|224113315|ref|XP_002316453.1| predicted protein [Populus trichocarpa]
gi|222865493|gb|EEF02624.1| predicted protein [Populus trichocarpa]
Length = 633
Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G P ++ + DV + +I D G++ VGNILGE +N++ +GR+
Sbjct: 540 NGIPHLTQVGSFSVDVSLEGNLILCRQVDQPGMIGQVGNILGEQNVNVSFMSVGRTARRR 599
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
+AI + +D L+K+ I
Sbjct: 600 NAIMAIGVDEEPNLESLKKIGEVPAI 625
>gi|255555301|ref|XP_002518687.1| d-3-phosphoglycerate dehydrogenase, putative [Ricinus communis]
gi|223542068|gb|EEF43612.1| d-3-phosphoglycerate dehydrogenase, putative [Ricinus communis]
Length = 596
Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG+ILGE +N++ +GR +
Sbjct: 503 DGIPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGKVGSILGEENVNVSFMSVGRIAPRK 562
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +D L+K+ I
Sbjct: 563 QAVMAIGVDDQPKKESLKKIGDIPAI 588
>gi|239624630|ref|ZP_04667661.1| L-serine dehydratase [Clostridiales bacterium 1_7_47_FAA]
gi|239521016|gb|EEQ60882.1| L-serine dehydratase [Clostridiales bacterium 1_7_47FAA]
Length = 219
Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 39/94 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ + + + +++ D G + V ++ + G+NI +F L R Q
Sbjct: 124 GGGNILVTEVNGMEVSITGQHTTLIVLHRDAPGTIAAVTEVMADAGVNICNFRLSRQQKG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + IDGS + +K+ V + +
Sbjct: 184 GDAVMTIEIDGSFGPELNQKIKVLPNVFSSTMLQ 217
>gi|115469298|ref|NP_001058248.1| Os06g0655100 [Oryza sativa Japonica Group]
gi|113596288|dbj|BAF20162.1| Os06g0655100 [Oryza sativa Japonica Group]
Length = 629
Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 40/86 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DGKP + + DV + +I D GI+ VG+ILG+ +N+ +GR+ +
Sbjct: 536 DGKPHLTLVGPFSVDVSLEGNLILCRQVDQPGIIGKVGSILGKMNVNVNFMSVGRTAPGK 595
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D L+ + ++
Sbjct: 596 QAIMAIGVDEEPEKEALKLIGDIPSV 621
>gi|270307961|ref|YP_003330019.1| phosphoglycerate dehydrogenase [Dehalococcoides sp. VS]
gi|270153853|gb|ACZ61691.1| phosphoglycerate dehydrogenase [Dehalococcoides sp. VS]
Length = 526
Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 5 GKPRFIKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G +K+ + D+ G + + D G++ G I G+ INI++ HL R ++
Sbjct: 433 GDVHIVKLNDYWIDIVPTGGYFLFADHIDRPGLIGAAGKITGDADINISYMHLSRQKARG 492
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + ++L ++ V+ +
Sbjct: 493 QALMILALDEPLPEKQRQQLLSLQDVQTVQVVKI 526
>gi|308177181|ref|YP_003916587.1| phosphoglycerate dehydrogenase [Arthrobacter arilaitensis Re117]
gi|307744644|emb|CBT75616.1| phosphoglycerate dehydrogenase [Arthrobacter arilaitensis Re117]
Length = 531
Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 44/90 (48%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I ++ I MI + AD G+V +GN+LGE G+NIA + R + A++
Sbjct: 440 KLVGINGHEIEIPISDHMIVVRYADRPGVVGSLGNVLGEQGVNIAGMQVSRDEKKAEALA 499
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ ID ++ VL+ + + ++
Sbjct: 500 VINIDSALPQGVLDVVGAAIGASVAREINL 529
>gi|296090450|emb|CBI40269.3| unnamed protein product [Vitis vinifera]
Length = 432
Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG+ILGE +N++ +GR +
Sbjct: 339 DGIPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGKVGSILGEENVNVSFMSVGRVAPRK 398
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
HA+ + +D L+K+ +
Sbjct: 399 HAVMAIGVDEQPSKVTLKKIGEIPAV 424
>gi|330684332|gb|EGG96064.1| phosphoglycerate dehydrogenase [Staphylococcus epidermidis VCU121]
Length = 531
Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 41/85 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V S PR ++I + D + I + D GIV GN+LG GINI LGR+
Sbjct: 433 VLSGFGPRIVRINNFSLDFKPSQYQIVTCHNDQPGIVGKTGNLLGNKGINIGSMTLGRTN 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSV 85
A+ L ID ++++ +L+
Sbjct: 493 EGGQALMILSIDQPASHALVAELNN 517
>gi|326505978|dbj|BAJ91228.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514850|dbj|BAJ99786.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 617
Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG++LGE +N++ +GR +
Sbjct: 524 DGIPHLTKVGAFEVDVSMEGSLILCRQVDQPGMIGSVGSVLGEENVNVSFMSVGRIAPRK 583
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D + L K+ I
Sbjct: 584 TAIMAIGVDEEPSKTTLTKIGEIPAI 609
>gi|284161805|ref|YP_003400428.1| D-3-phosphoglycerate dehydrogenase [Archaeoglobus profundus DSM
5631]
gi|284011802|gb|ADB57755.1| D-3-phosphoglycerate dehydrogenase [Archaeoglobus profundus DSM
5631]
Length = 525
Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR--SQS 61
+ R ++I + D + ++ D G++ VG ++G+Y INIA +GR +
Sbjct: 430 GEECRILRIDKYKVDFVPKGHYVISLHEDKPGVIGRVGTLMGKYNINIAGMIVGRYGDKP 489
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ L +D +L+K+ I
Sbjct: 490 GGIQLMLLLLDDPPTEEILKKMVELEGIIDATYV 523
>gi|310658669|ref|YP_003936390.1| l-serine dehydratase, iron-sulfur-dependent subunit beta
[Clostridium sticklandii DSM 519]
gi|308825447|emb|CBH21485.1| l-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium sticklandii]
Length = 221
Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 34/95 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I I+ I + D G+V + +L E INIA L R
Sbjct: 127 GGGSVLVRQINGIDVKFTGEYATIMVQQIDKPGVVAHITKVLSENNINIAFMSLFRESLG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
E A + L +D + +L KL + I
Sbjct: 187 EKAFTMLELDEKVSEDILLKLKEHEYIIDTFLISI 221
>gi|187934314|ref|YP_001887295.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum B str. Eklund 17B]
gi|187722467|gb|ACD23688.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum B str. Eklund 17B]
Length = 226
Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 34/94 (36%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + D+ G++ V +IL + IN+A + R+
Sbjct: 127 GGGNIQISEVNGNPVEFTGNYETLIVSQRDLPGVIHSVTSILSKENINVAFMKVFRNHKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A +D I + ++ + +
Sbjct: 187 KDATMIFEMDNKISEKAIREIEKLELVHRIISIS 220
>gi|299136357|ref|ZP_07029541.1| D-3-phosphoglycerate dehydrogenase [Acidobacterium sp. MP5ACTX8]
gi|298602481|gb|EFI58635.1| D-3-phosphoglycerate dehydrogenase [Acidobacterium sp. MP5ACTX8]
Length = 540
Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V PR + I+ + ++ ++ I N D+ G++ +G ILGE +NIA+F LGRS
Sbjct: 434 VLHGHSPRLLSYDGIDVEAELTGTLVVIRNQDVPGVIGRIGTILGEAKLNIANFALGRST 493
Query: 61 S--TEHAISFLCID-----GSILNSVLEKLSVNVTIRFVKQFEF 97
A++ + +D L L +L +I V E
Sbjct: 494 RLPGSQALAVVQLDVPAEAQPALQQALAELRKVESITSVHIVEL 537
>gi|239637958|ref|ZP_04678919.1| phosphoglycerate dehydrogenase [Staphylococcus warneri L37603]
gi|239596521|gb|EEQ79057.1| phosphoglycerate dehydrogenase [Staphylococcus warneri L37603]
Length = 531
Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 41/85 (48%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V S PR ++I + D + I + D GIV GN+LG+ GINI LGR+
Sbjct: 433 VLSGFGPRIVRINNFSLDFKPNQYQIVTCHNDQPGIVGKTGNLLGDNGINIGSMTLGRTI 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSV 85
A+ L ID +++ +L+
Sbjct: 493 EGGQALMILSIDQPASQTLVTELNN 517
>gi|224105607|ref|XP_002313870.1| predicted protein [Populus trichocarpa]
gi|222850278|gb|EEE87825.1| predicted protein [Populus trichocarpa]
Length = 543
Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 38/86 (44%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P ++ DV + +I D G++ VG++LG +N++ +GR +
Sbjct: 450 DGIPHLTRVGSFEVDVSLEGSIILCRQVDQPGMIGKVGSVLGGQNVNVSFMSVGRIAPRK 509
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +D L+K+ +
Sbjct: 510 QAVMAIGVDEQPSKETLKKIGDIPAV 535
>gi|125556326|gb|EAZ01932.1| hypothetical protein OsI_23958 [Oryza sativa Indica Group]
Length = 613
Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 40/86 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DGKP + + DV + +I D GI+ VG+ILG+ +N+ +GR+ +
Sbjct: 520 DGKPHLTLVGPFSVDVSLEGNLILCRQVDQPGIIGKVGSILGKMNVNVNFMSVGRTAPGK 579
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D L+ + ++
Sbjct: 580 QAIMAIGVDEEPEKEALKLIGDIPSV 605
>gi|90399366|emb|CAH68268.1| H0212B02.14 [Oryza sativa Indica Group]
gi|116311962|emb|CAJ86321.1| OSIGBa0113E10.4 [Oryza sativa Indica Group]
Length = 613
Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG++LGE +N++ +GR +
Sbjct: 520 DGIPHLTKVGSFQVDVSLEGSLILCRQVDQPGMIGAVGSVLGEENVNVSFMSVGRIAPRK 579
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
HA+ + +D S L K+ I
Sbjct: 580 HAVMAIGVDEEPKKSTLTKIGEIPAI 605
>gi|205373332|ref|ZP_03226136.1| SdaAB [Bacillus coahuilensis m4-4]
Length = 220
Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 37/94 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + I +V+ D G V V IL + INI H + R +
Sbjct: 126 GGGKIEITELNGFELKLSGAHPAILVVHNDRYGAVAAVSAILAAHCINIGHMEVSRKEMG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A+ + D +I VL +L I V +
Sbjct: 186 QLALMIIETDQTIDREVLVELESLDNIVKVTKIS 219
>gi|229019354|ref|ZP_04176178.1| L-serine dehydratase, beta chain [Bacillus cereus AH1273]
gi|229025600|ref|ZP_04182007.1| L-serine dehydratase, beta chain [Bacillus cereus AH1272]
gi|228735694|gb|EEL86282.1| L-serine dehydratase, beta chain [Bacillus cereus AH1272]
gi|228741922|gb|EEL92098.1| L-serine dehydratase, beta chain [Bacillus cereus AH1273]
Length = 220
Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 127 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ + D + + V+ +++ I V
Sbjct: 187 RRALMVIETDELLADEVIAEINGQQNICQV 216
>gi|226498082|ref|NP_001147127.1| D-3-phosphoglycerate dehydrogenase [Zea mays]
gi|195607486|gb|ACG25573.1| D-3-phosphoglycerate dehydrogenase [Zea mays]
Length = 612
Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG++LGE IN++ +GR +
Sbjct: 519 DGVPHLTKVGAFQVDVSLEGSLILCRQVDQPGMIGSVGSVLGEENINVSFMSVGRIAPRK 578
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
HA+ + +D L K+ I
Sbjct: 579 HAVMAIGVDEEPSKVTLRKIGEIPAI 604
>gi|323706077|ref|ZP_08117646.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacterium xylanolyticum LX-11]
gi|323534521|gb|EGB24303.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 228
Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 34/93 (36%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I +N + + + D GI+ V +L E+ INIA + R
Sbjct: 129 GGGNVVLKEINGMNVEFTGEYETLITKHIDKPGIIAMVTKVLSEHMINIAFMRVYRQLKG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ AI + D +I V ++ I
Sbjct: 189 DMAIMVIESDQTIPEDVRIRIEHIDGIEKAIVV 221
>gi|115460988|ref|NP_001054094.1| Os04g0650800 [Oryza sativa Japonica Group]
gi|32488924|emb|CAE04505.1| OSJNBb0059K02.15 [Oryza sativa Japonica Group]
gi|113565665|dbj|BAF16008.1| Os04g0650800 [Oryza sativa Japonica Group]
gi|125550010|gb|EAY95832.1| hypothetical protein OsI_17701 [Oryza sativa Indica Group]
gi|215768007|dbj|BAH00236.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 613
Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG++LGE +N++ +GR +
Sbjct: 520 DGIPHLTKVGSFQVDVSLEGSLILCRQVDQPGMIGAVGSVLGEENVNVSFMSVGRIAPRK 579
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
HA+ + +D S L K+ I
Sbjct: 580 HAVMAIGVDEEPKKSTLTKIGEIPAI 605
>gi|125598081|gb|EAZ37861.1| hypothetical protein OsJ_22207 [Oryza sativa Japonica Group]
Length = 613
Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 40/86 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DGKP + + DV + +I D GI+ VG+ILG+ +N+ +GR+ +
Sbjct: 520 DGKPHLTLVGPFSVDVSLEGNLILCRQVDQPGIIGKVGSILGKMNVNVNFMSVGRTAPGK 579
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D L+ + ++
Sbjct: 580 QAIMAIGVDEEPEKEALKLIGDIPSV 605
>gi|117927917|ref|YP_872468.1| D-3-phosphoglycerate dehydrogenase [Acidothermus cellulolyticus
11B]
gi|117648380|gb|ABK52482.1| D-3-phosphoglycerate dehydrogenase [Acidothermus cellulolyticus
11B]
Length = 530
Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 45/90 (50%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ +KI + + D+ + + D GIV +G ILGE+GINIA + R HA+
Sbjct: 438 KLVKIDDFDVDLTLSEHLGFFRYEDRPGIVGILGRILGEHGINIAGMQVARDVKGGHALI 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D +I ++V+E + + + +
Sbjct: 498 ALTVDSAIPDTVVETVVREIGASSGRAVDL 527
>gi|307111670|gb|EFN59904.1| hypothetical protein CHLNCDRAFT_56437 [Chlorella variabilis]
Length = 609
Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 39/92 (42%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G P ++ + D+ + ++ + D GI+ V + +NI+ + R
Sbjct: 513 GLPFLTRVGGFDVDLALEGEVVLVRQTDQPGIIAAVSSEFAASKVNISFMTVSRVAKGTE 572
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
AI + +D + +V++ +S ++ V F
Sbjct: 573 AIMAIGVDEAPSAAVMDAISKIKGVQEVTLFS 604
>gi|302781158|ref|XP_002972353.1| hypothetical protein SELMODRAFT_413029 [Selaginella moellendorffii]
gi|300159820|gb|EFJ26439.1| hypothetical protein SELMODRAFT_413029 [Selaginella moellendorffii]
Length = 627
Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 41/86 (47%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P ++ + + DV + +I D GI+ VG +LG+ +N++ +GR+ +
Sbjct: 534 DGLPHLSQVGQFSMDVSLEGSVILCKQVDQPGIIGKVGGLLGDGNVNVSFMSVGRTSPRK 593
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +D VL ++ +
Sbjct: 594 QAVMAIGVDEEPSKEVLHRIGAIPAV 619
>gi|229013350|ref|ZP_04170490.1| L-serine dehydratase, beta chain [Bacillus mycoides DSM 2048]
gi|229134948|ref|ZP_04263755.1| L-serine dehydratase, beta chain [Bacillus cereus BDRD-ST196]
gi|229168884|ref|ZP_04296602.1| L-serine dehydratase, beta chain [Bacillus cereus AH621]
gi|228614614|gb|EEK71721.1| L-serine dehydratase, beta chain [Bacillus cereus AH621]
gi|228648623|gb|EEL04651.1| L-serine dehydratase, beta chain [Bacillus cereus BDRD-ST196]
gi|228747943|gb|EEL97808.1| L-serine dehydratase, beta chain [Bacillus mycoides DSM 2048]
Length = 220
Score = 87.8 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 127 GGGKIEVVELNGFDLQLTGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ + D + + V+ +++ I V
Sbjct: 187 RRALMVIETDELLADEVIAEINGQQNICQV 216
>gi|224034059|gb|ACN36105.1| unknown [Zea mays]
Length = 612
Score = 87.8 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG++LGE IN++ +GR +
Sbjct: 519 DGVPHLTKVGAFQVDVSLEGSLILCRQVDQPGMIGSVGSVLGEENINVSFMSVGRIAPRK 578
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
HA+ + +D L K+ I
Sbjct: 579 HAVMAIGVDEEPSKVTLRKIGEIPAI 604
>gi|116789697|gb|ABK25346.1| unknown [Picea sitchensis]
Length = 622
Score = 87.8 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 39/94 (41%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G P K+ + DV + +I D G++ VGNILGE +N+ +GR +
Sbjct: 529 GGIPHLSKVGAFSVDVSLEGSVILCRQTDQPGMIGTVGNILGEENVNVNFMSVGRIAPRK 588
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ + +D L+K+ I +
Sbjct: 589 KAVMAIGVDEEPSKGALKKIGDVPAIEEFVYLKL 622
>gi|163941882|ref|YP_001646766.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
weihenstephanensis KBAB4]
gi|163864079|gb|ABY45138.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
weihenstephanensis KBAB4]
Length = 220
Score = 87.8 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 127 GGGKIEVVELNGFDLQLTGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ + D + + V+ +++ I V
Sbjct: 187 RRALMVIETDELLADEVIAEINGQQNICQV 216
>gi|296875543|ref|ZP_06899615.1| L-serine dehydratase beta subunit [Streptococcus parasanguinis ATCC
15912]
gi|296433467|gb|EFH19242.1| L-serine dehydratase beta subunit [Streptococcus parasanguinis ATCC
15912]
Length = 223
Score = 87.8 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ +++ I IV+ D+ G++ V L Y INIA ++ R ++
Sbjct: 130 GGGNIQVTELNGFAISLNMNTPTIIIVHQDVPGMIAHVTEALSRYDINIAQMNVTREKAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI + +D +E + + V F+
Sbjct: 190 EKAIMIIEVDSRSCEVAIEDIRKIPHLHNVNFFK 223
>gi|224060560|ref|XP_002300235.1| predicted protein [Populus trichocarpa]
gi|118485917|gb|ABK94804.1| unknown [Populus trichocarpa]
gi|222847493|gb|EEE85040.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 87.8 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 38/86 (44%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG++LG +N++ +GR +
Sbjct: 504 DGIPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGKVGSVLGVENVNVSFMSVGRIAPRK 563
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +D L+K+ +
Sbjct: 564 QAVMAIGVDEQPSKETLKKIGDIPAV 589
>gi|315162115|gb|EFU06132.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0645]
Length = 233
Score = 87.8 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G +V+ D+ G++ V NIL INI+ + R
Sbjct: 140 GGGNIQISELNGFKLSLSMGTPTFIVVHQDVPGMIAKVTNILSASDINISTMTVTRESKG 199
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E AI + +D + + ++ +L+ + I V F
Sbjct: 200 EKAIMIIEVDQAEVGDIVMQLAEILHIYSVNYF 232
>gi|195979021|ref|YP_002124265.1| probable L-serine dehydratase beta chain SdaAB [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|195975726|gb|ACG63252.1| probable L-serine dehydratase beta chain SdaAB [Streptococcus equi
subsp. zooepidemicus MGCS10565]
Length = 223
Score = 87.8 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 41/90 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + + IV+ DI G++ V +IL INIA + R +
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTLIIVHQDIPGMIAKVTDILSASDINIAQMTVTRESAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E AI + +D + +++++ + V
Sbjct: 190 EKAIMIIEVDSRDCQAAVKQIATIPNLHNV 219
>gi|28210417|ref|NP_781361.1| D-3-phosphoglycerate dehydrogenase [Clostridium tetani E88]
gi|28202854|gb|AAO35298.1| D-3-phosphoglycerate dehydrogenase [Clostridium tetani E88]
Length = 533
Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 43/93 (46%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
+ + ++I E DV M+ + N D+ G++ VG LG G+N+A +GR +
Sbjct: 441 NEGKLVEIMEYEVDVKPTECMVFLQNYDVPGVIGHVGTFLGTNGVNVATMQVGRKLKGDK 500
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D + L L + I + K +
Sbjct: 501 ALMLLNVDDKVTQDTLLGLQKHDDILWAKFVQL 533
>gi|308081353|ref|NP_001183055.1| hypothetical protein LOC100501398 [Zea mays]
gi|238009062|gb|ACR35566.1| unknown [Zea mays]
Length = 598
Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG++LGE IN++ +GR +
Sbjct: 505 DGVPHLTKVGAFQVDVSLEGSLILCRQVDQPGMIGSVGSVLGEENINVSFMSVGRIAPRK 564
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
HA+ + +D L K+ I
Sbjct: 565 HAVMAIGVDEEPSKVTLRKIGEIPAI 590
>gi|319653242|ref|ZP_08007344.1| L-serine dehydratase subunit [Bacillus sp. 2_A_57_CT2]
gi|317395163|gb|EFV75899.1| L-serine dehydratase subunit [Bacillus sp. 2_A_57_CT2]
Length = 220
Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 39/90 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ + I +V+ D G++ V NIL ++ INI H + R +
Sbjct: 126 GGGTIEITELNSFELKLSGEHPAILVVHNDQFGVISAVTNILSKHQINIGHMEVSRKEKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ AI + +D I + V+ +L I +
Sbjct: 186 KMAIMVIEVDQKIGHDVMTELEGLPNITQI 215
>gi|255281326|ref|ZP_05345881.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Bryantella formatexigens DSM 14469]
gi|255268283|gb|EET61488.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Bryantella formatexigens DSM 14469]
Length = 268
Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I + I I + D G++ V +L E INIA + RS
Sbjct: 175 GGGSIEIQEINGMEVSFGCEYPTILIFHHDRPGVINKVTGVLAEEKINIAFMCVFRSSRW 234
Query: 63 EHAISFLCIDGSILNSVLEKL-SVNVTIRFV 92
++A + DG + +LE + + + V
Sbjct: 235 QNACMIIETDGDVKREILEHIRRESEDVMEV 265
>gi|261368971|ref|ZP_05981854.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Subdoligranulum variabile DSM 15176]
gi|282568925|gb|EFB74460.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Subdoligranulum variabile DSM 15176]
Length = 218
Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 37/87 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I + + + + + D G++ V ++L + G+NI +F L R Q
Sbjct: 124 GGGNIVIDAINGMAVRISGQHPSLIVQHRDRPGVIAEVTDLLADRGVNICNFSLSRRQKG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +DG + ++ ++ +
Sbjct: 184 GVAVMTIEMDGGLDEALAARVRALPDV 210
>gi|302385249|ref|YP_003821071.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium saccharolyticum WM1]
gi|302195877|gb|ADL03448.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium saccharolyticum WM1]
Length = 219
Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 38/96 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G K+ ++ + +++ D+ GI+ V N++ NI +F L R +
Sbjct: 124 GGGNIVITKVNDMEVYFTGQNTTLIVMHQDLPGIIAHVTNLVAVGKANICNFRLNRQEKG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
AI + +D S++ ++ + + N
Sbjct: 184 GLAIMTIEMDSDFDQSLVREIKAIPHVYNTILLKLN 219
>gi|118443198|ref|YP_877338.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium novyi NT]
gi|118133654|gb|ABK60698.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium novyi NT]
Length = 227
Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 33/94 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I+ + + + + D G++ + +L INI + R
Sbjct: 127 GGGNILIFDIEGQDVEFRGDYPTLITTHKDTPGVISKITTMLYTENINIGSMKVYRGGKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+A L D I +++K+ I+ ++
Sbjct: 187 VNATMALETDNIIPEDIIDKIKGITEIQKIRVIN 220
>gi|125624524|ref|YP_001033007.1| L-serine dehydratase beta subunit [Lactococcus lactis subsp.
cremoris MG1363]
gi|124493332|emb|CAL98305.1| L-serine dehydratase beta subunit [Lactococcus lactis subsp.
cremoris MG1363]
gi|300071318|gb|ADJ60718.1| L-serine dehydratase beta subunit [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 223
Score = 87.4 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 44/94 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + G +++ D+ G++ V ++L E+ INIA ++ R
Sbjct: 130 GGGMIQVTELNGFDIAISAGVPTFVVIHEDVPGMIARVSSVLSEHQINIAQMNVTREAKG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI L +D + V+E++ + + V F
Sbjct: 190 EKAIMILEVDIPNVKEVIEEMKLIPRLHAVNFFN 223
>gi|312879110|ref|ZP_07738910.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Aminomonas paucivorans DSM 12260]
gi|310782401|gb|EFQ22799.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Aminomonas paucivorans DSM 12260]
Length = 224
Score = 87.4 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 1/94 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + + + D G++ V +L E G+NIA ++ R
Sbjct: 124 GGGAVELQSVDGFQLRATGAFPTLVTFHRDEPGVIAAVSALLAEGGLNIASMNVHRQGRG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSV-NVTIRFVKQF 95
A L +DG+ ++L +L + + +
Sbjct: 184 AKAAMVLELDGAPDGALLARLEACHPGLERLLVL 217
>gi|229061812|ref|ZP_04199145.1| L-serine dehydratase, beta chain [Bacillus cereus AH603]
gi|228717558|gb|EEL69222.1| L-serine dehydratase, beta chain [Bacillus cereus AH603]
Length = 214
Score = 87.4 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL ++ INI+ + R +
Sbjct: 121 GGGKIEVVELNGFDLQLTGTSPALLIVNNDRFGAIAAVASILAKHEINISTMSVSRKEKG 180
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ + D + + V+ +++ I V
Sbjct: 181 RRALMVIETDELLADEVIAEINGQQNICQV 210
>gi|160935599|ref|ZP_02082974.1| hypothetical protein CLOBOL_00489 [Clostridium bolteae ATCC
BAA-613]
gi|158441343|gb|EDP19053.1| hypothetical protein CLOBOL_00489 [Clostridium bolteae ATCC
BAA-613]
Length = 219
Score = 87.4 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 38/94 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ + + + +++ D G + V ++ + G+NI +F L R
Sbjct: 124 GGGNILVKEVNGMEVSITGQHTTLIVLHRDAPGTIAAVTEVMADAGVNICNFRLSRQSRG 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + IDGS + EK+ V I +
Sbjct: 184 GEAVMTIEIDGSFGPELNEKIKVLPNIFSSTMLQ 217
>gi|168002445|ref|XP_001753924.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694900|gb|EDQ81246.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 523
Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ + DV + +I D G++ VG+ILG+ +NI+ +GR +
Sbjct: 430 DGVPYLSKVGDFGVDVSLEDSIILCRQVDQPGMIGKVGSILGQENVNISFMSVGRKSPRQ 489
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
HA+ + +D L+KL +
Sbjct: 490 HAVMAIGVDEEPSKVTLQKLGDIPAV 515
>gi|154686001|ref|YP_001421162.1| SdaAB [Bacillus amyloliquefaciens FZB42]
gi|154351852|gb|ABS73931.1| SdaAB [Bacillus amyloliquefaciens FZB42]
Length = 220
Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 41/93 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + I +V+ D G + V N+L ++ IN+ H + R
Sbjct: 126 GGGKIEITELNGFELRLSGNHPAILVVHNDKFGTIAGVANVLAKFSINVGHMEVARKDVG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ + +D +I VL++LS I V +
Sbjct: 186 QLALMTIEVDQNIEEEVLDELSTLPNIIQVTKI 218
>gi|332179200|gb|AEE14889.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermodesulfobium narugense DSM 14796]
Length = 220
Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 36/94 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G KI ++ + + D GI+ + I+ INIA+ ++ R +
Sbjct: 125 GGGNIVVKKIDNYEVNLTGNYETLITCHKDHPGIIAKITQIISSKNINIAYMYVSRLEKG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A+ + D I + L + + FVK
Sbjct: 185 KDAMMTIETDDYITPDIYSALLKSPDLNFVKIIH 218
>gi|256827421|ref|YP_003151380.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit/L-serine
dehydratase, iron-sulfur-dependent, beta subunit
[Cryptobacterium curtum DSM 15641]
gi|256583564|gb|ACU94698.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit/L-serine
dehydratase, iron-sulfur-dependent, beta subunit
[Cryptobacterium curtum DSM 15641]
Length = 541
Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 39/93 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I ++ ++ + I D +G++ + + G NIA R Q
Sbjct: 128 GGGAATLTRINGVDVNITGECTSVIIQQRDTVGVLAHITQSISHIGGNIATLRCYREQRG 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E A + L +DGS+ SV E + + I ++
Sbjct: 188 ETAYTVLEVDGSVPISVCEAIMGHPGIMSIRVI 220
>gi|284047795|ref|YP_003398134.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Acidaminococcus fermentans DSM 20731]
gi|283952016|gb|ADB46819.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Acidaminococcus fermentans DSM 20731]
Length = 221
Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILG--EYGINIAHFHLGRSQ 60
G R + + D R I + + D G++ V NI+ +NIA+F L R
Sbjct: 124 GGGNIRVDYVDGMKVDFTGERNTILVPHYDRPGVIAAVTNIMWQKHKDVNIANFKLSRPV 183
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + IDG V+E + + V
Sbjct: 184 KGGIAMMTIEIDGMPPADVIETIRSVQYVTNVVLIR 219
>gi|269791881|ref|YP_003316785.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269099516|gb|ACZ18503.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 224
Score = 87.4 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 32/89 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ + + D G++ V IL E GIN+ ++ R
Sbjct: 123 GGGAVELQEVDGFVLRATGELPTMVTFHRDEPGVIAAVTAILAEAGINVGSMNVHRQGRG 182
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRF 91
+ A L +DG V+E++ +
Sbjct: 183 KGAAMVLELDGLPPEQVVERIKGCHSAIR 211
>gi|116511642|ref|YP_808858.1| L-serine ammonia-lyase [Lactococcus lactis subsp. cremoris SK11]
gi|116107296|gb|ABJ72436.1| L-serine ammonia-lyase [Lactococcus lactis subsp. cremoris SK11]
Length = 223
Score = 87.4 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 43/94 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + G +++ D+ G++ V ++L E+ INIA ++ R
Sbjct: 130 GGGMIQVTELNGFDIAISAGVPTFVVIHEDVPGMIARVSSLLSEHQINIAQMNVTREAKG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E AI L +D + V+ ++ + + V F
Sbjct: 190 EKAIMILEVDTPNVKEVIGEMKLIPRLHAVNFFN 223
>gi|294056127|ref|YP_003549785.1| D-3-phosphoglycerate dehydrogenase [Coraliomargarita akajimensis
DSM 45221]
gi|293615460|gb|ADE55615.1| D-3-phosphoglycerate dehydrogenase [Coraliomargarita akajimensis
DSM 45221]
Length = 528
Score = 87.0 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 44/92 (47%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
PR + I +V+ ++ + N D+ GIV F+G LGE +NIA+ L R + A
Sbjct: 437 NPRIVTIDGHGVEVNTDATLLVLKNKDVPGIVGFIGVTLGEDEVNIANMSLSRDKGEGFA 496
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+S +D + + K++ + I + +
Sbjct: 497 VSVFELDTAPSEACATKITEHHAIEKYRVIKL 528
>gi|317012830|gb|ADU83438.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori
Lithuania75]
Length = 524
Score = 87.0 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|308173548|ref|YP_003920253.1| L-serine dehydratase subunit beta [Bacillus amyloliquefaciens DSM
7]
gi|307606412|emb|CBI42783.1| L-serine dehydratase (beta chain) [Bacillus amyloliquefaciens DSM
7]
gi|328553519|gb|AEB24011.1| L-serine dehydratase (beta chain) [Bacillus amyloliquefaciens
TA208]
gi|328911689|gb|AEB63285.1| L-serine dehydratase (beta chain) [Bacillus amyloliquefaciens LL3]
Length = 220
Score = 87.0 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 41/93 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + I +V+ D G + V N+L ++ IN+ H + R
Sbjct: 126 GGGKIEITELNGFELRLSGNHPAILVVHNDKFGTIAGVANVLAKFSINVGHMEVARKDVG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ + +D +I VL++LS I V +
Sbjct: 186 QLALMTIEVDQNIEEEVLDELSTLPNIIQVTKI 218
>gi|15645025|ref|NP_207195.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori 26695]
gi|2313497|gb|AAD07461.1| phosphoglycerate dehydrogenase (serA) [Helicobacter pylori 26695]
Length = 524
Score = 87.0 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|109947057|ref|YP_664285.1| D-3-phosphoglycerate dehydrogenase [Helicobacter acinonychis str.
Sheeba]
gi|109714278|emb|CAJ99286.1| D-3-phosphoglycerate dehydrogenase [Helicobacter acinonychis str.
Sheeba]
Length = 524
Score = 87.0 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN+ +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNVFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|325997911|gb|ADZ50119.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori 2017]
Length = 524
Score = 87.0 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|307637719|gb|ADN80169.1| D-3-phospho glycerate dehydrogenase [Helicobacter pylori 908]
gi|325996322|gb|ADZ51727.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori 2018]
Length = 524
Score = 87.0 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|317014441|gb|ADU81877.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori
Gambia94/24]
Length = 524
Score = 87.0 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|225001262|gb|ACN78491.1| putative phosphoglycerate dehydrogenase [Arachis hypogaea]
Length = 223
Score = 87.0 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ + DV + +I D G++ VG++LG+ +N++ +GR +
Sbjct: 130 DGIPHLTKVGSFDVDVSLEGSIILCRQVDQPGMIGKVGSVLGQENVNVSFMSVGRIAPRK 189
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +D L+K+ +
Sbjct: 190 QAVMAIGVDEQPSKETLKKIGEIPAV 215
>gi|50954968|ref|YP_062256.1| D-3-phosphoglycerate dehydrogenase [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50951450|gb|AAT89151.1| D-3-phosphoglycerate dehydrogenase [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 530
Score = 87.0 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I + +V I +I +V D GIV G GE INIA + R+ + A+S
Sbjct: 438 KVVEINGYDVEVPIAEHLIVMVYDDRPGIVAVYGREFGEAKINIAGMQIARTSAGGKALS 497
Query: 68 FLCIDGSILNSVLEKLS 84
L +D S+ +LEK+
Sbjct: 498 VLTVDSSVPEGLLEKVR 514
>gi|317177807|dbj|BAJ55596.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori F16]
Length = 524
Score = 87.0 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|317011252|gb|ADU84999.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori
SouthAfrica7]
Length = 524
Score = 87.0 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN+ +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNVFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|210135216|ref|YP_002301655.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori P12]
gi|210133184|gb|ACJ08175.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori P12]
Length = 524
Score = 87.0 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|323359647|ref|YP_004226043.1| phosphoglycerate dehydrogenase [Microbacterium testaceum StLB037]
gi|323276018|dbj|BAJ76163.1| phosphoglycerate dehydrogenase [Microbacterium testaceum StLB037]
Length = 534
Score = 86.6 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 43/91 (47%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
P+ + I + +V I + + + AD GIV G LGE GINIA + +T A+
Sbjct: 441 PKVVAINGYDIEVPIEQHHLVMRYADRPGIVAIYGQKLGEAGINIAGLQVAAPDATGRAL 500
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
S L +D + + +L + V +Q +
Sbjct: 501 SVLTVDSPVPDEILGAMREAVGADLFRQIDI 531
>gi|108563420|ref|YP_627736.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori HPAG1]
gi|107837193|gb|ABF85062.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori HPAG1]
Length = 524
Score = 86.6 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|308184795|ref|YP_003928928.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori SJM180]
gi|308060715|gb|ADO02611.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori SJM180]
Length = 524
Score = 86.6 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|329117432|ref|ZP_08246149.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus parauberis NCFD 2020]
gi|326907837|gb|EGE54751.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Streptococcus parauberis NCFD 2020]
Length = 223
Score = 86.6 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + I IV+ DI G++ V +IL ++ INIA ++ R +
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTIIIVHQDIPGMIAHVTDILSDFDINIAQMNVTREAAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E AI + +D + ++ + + V
Sbjct: 190 EKAIMIIEVDSRDCQAAIQLIEKIPHLHNV 219
>gi|253576749|ref|ZP_04854075.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Paenibacillus sp. oral taxon 786 str. D14]
gi|251843780|gb|EES71802.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Paenibacillus sp. oral taxon 786 str. D14]
Length = 223
Score = 86.6 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 32/95 (33%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I + I +AD G++ + + +NI + R T
Sbjct: 127 GGGTIVIRNIDGFEVKCSGELPTLVISHADRQGVLAGITALFSRENVNIGYIITDRKGRT 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A++ + D SI ++E + + V +
Sbjct: 187 AEALTVVEADSSIPPELVEAIRALEHVSQVSYIDL 221
>gi|302875117|ref|YP_003843750.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium cellulovorans 743B]
gi|307690257|ref|ZP_07632703.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium cellulovorans 743B]
gi|302577974|gb|ADL51986.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium cellulovorans 743B]
Length = 231
Score = 86.6 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 38/94 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ + + + I + D+ G++ V I+ + INIA + R+
Sbjct: 127 GGGNIIINEVDDEKLEFSGNYPTLIIKHKDLPGMISKVSEIISKQNINIAFLKVLRTSKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A D ++ + V+ +++ I V+
Sbjct: 187 QSATMIFETDSTLNDDVVNEINTLNHIENVRMIN 220
>gi|317178639|dbj|BAJ56427.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori F30]
Length = 524
Score = 86.6 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+S + +D + VLE+L V
Sbjct: 489 Q-KEALSLIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|254779611|ref|YP_003057717.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori B38]
gi|254001523|emb|CAX29541.1| D-3-phosphoglycerate dehydrogenase (PGDH) [Helicobacter pylori B38]
Length = 524
Score = 86.6 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|217034326|ref|ZP_03439742.1| hypothetical protein HP9810_491g19 [Helicobacter pylori 98-10]
gi|216943211|gb|EEC22678.1| hypothetical protein HP9810_491g19 [Helicobacter pylori 98-10]
Length = 524
Score = 86.6 bits (214), Expect = 9e-16, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|315924821|ref|ZP_07921038.1| D-isomer specific 2-hydroxyacid dehydrogenase [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621720|gb|EFV01684.1| D-isomer specific 2-hydroxyacid dehydrogenase [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 389
Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + N D+ I + + ++ ++ + +L + INIA+
Sbjct: 298 NGNIVNSVNYPDCNMDICESAHRITVAHHNVPNMIAGITAVLAKDDINIANMT--NKNKG 355
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A + + +D + + + L + V+ +
Sbjct: 356 QFAYTMIDVDSEVTDQAIADLKAIEGVTRVRLVK 389
>gi|297380233|gb|ADI35120.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori v225d]
Length = 524
Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|296331160|ref|ZP_06873634.1| L-serine dehydratase (beta chain) [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674316|ref|YP_003865988.1| L-serine dehydratase subunit beta [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151804|gb|EFG92679.1| L-serine dehydratase (beta chain) [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412560|gb|ADM37679.1| L-serine dehydratase (beta chain) [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 220
Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + I +V+ D G + V N+L ++ IN+ H + R
Sbjct: 126 GGGKIEITELNGFELRLSGNHPAILVVHNDKFGTIAGVANVLAKFSINVGHMEVARKDIG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ + +D +I + VL++LS I V +
Sbjct: 186 QLALMTIEVDQNIDDHVLDELSKLPNIIQVTKI 218
>gi|62321126|dbj|BAD94241.1| Phosphoglycerate dehydrogenase - like protein [Arabidopsis
thaliana]
Length = 259
Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 38/86 (44%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG+ILGE +N+ +GR +
Sbjct: 166 DGVPHLTKVGSFEVDVTLEGSIILCRQVDQPGMIGTVGSILGESNVNVNFMSVGRIAPRK 225
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D L+K+ +
Sbjct: 226 QAIMAIGVDDIPSKETLKKIGEIPAV 251
>gi|207092309|ref|ZP_03240096.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori
HPKX_438_AG0C1]
Length = 524
Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|308062332|gb|ADO04220.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori Cuz20]
Length = 524
Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|261838390|gb|ACX98156.1| 3-phosphoglycerate dehydrogenase [Helicobacter pylori 51]
Length = 524
Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|15612049|ref|NP_223701.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori J99]
gi|4155559|gb|AAD06553.1| D-3-PHOSPHOGLYCERATE DEHYDROGENASE [Helicobacter pylori J99]
Length = 524
Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|315586946|gb|ADU41327.1| possible phosphoglycerate dehydrogenase [Helicobacter pylori 35A]
Length = 524
Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|308183160|ref|YP_003927287.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori PeCan4]
gi|308065345|gb|ADO07237.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori PeCan4]
Length = 524
Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|302671074|ref|YP_003831034.1| L-serine dehydratase beta subunit SdhB [Butyrivibrio
proteoclasticus B316]
gi|302395547|gb|ADL34452.1| L-serine dehydratase beta subunit SdhB [Butyrivibrio
proteoclasticus B316]
Length = 222
Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNI--LGEYGINIAHFHLGRSQ 60
G +I ++ + + I +++ D G++ V ++ +NI++FHL R +
Sbjct: 125 GGGNILVNQINGMHVEFNGDNNTILVMHEDKPGVIANVTHMMHFEHADLNISNFHLSRQE 184
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
AI + ID +++++ ++
Sbjct: 185 KGGDAIMTIEIDNQPPEELVDEIRQIEHVKNAILIR 220
>gi|217032273|ref|ZP_03437770.1| hypothetical protein HPB128_142g21 [Helicobacter pylori B128]
gi|298735944|ref|YP_003728469.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori B8]
gi|216946039|gb|EEC24652.1| hypothetical protein HPB128_142g21 [Helicobacter pylori B128]
gi|298355133|emb|CBI66005.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori B8]
Length = 524
Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|225871463|ref|YP_002747410.1| L-serine dehydratase, beta chain [Streptococcus equi subsp. equi
4047]
gi|225700867|emb|CAW95614.1| putative L-serine dehydratase, beta chain [Streptococcus equi
subsp. equi 4047]
Length = 223
Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + + IV+ DI G++ V +IL INIA + R +
Sbjct: 130 GGGNIQVTELNGFSVSLSMNTPTLIIVHQDIPGMIAKVTDILSASDINIAQMTVTRESAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E AI + +D +++++ + V
Sbjct: 190 EKAIMIIEVDSRDCQVAVKQIATIPNLHNV 219
>gi|188527838|ref|YP_001910525.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori Shi470]
gi|188144078|gb|ACD48495.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori Shi470]
Length = 524
Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|302524967|ref|ZP_07277309.1| phosphoglycerate dehydrogenase [Streptomyces sp. AA4]
gi|302433862|gb|EFL05678.1| phosphoglycerate dehydrogenase [Streptomyces sp. AA4]
Length = 532
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 1 VFSDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRS 59
V + + ++I+ +FD+ ++ I D G++ VG +LGE GINI + +S
Sbjct: 434 VTGKDEVEKIVEIKGRHFDLRAEGDVLVIEYPDRPGVMGRVGTLLGEAGINIEAAQISQS 493
Query: 60 QSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
+I L +D + +VLE + V ++ +FN
Sbjct: 494 TDGSDSIMLLRVDRHVDANVLEPIGATVGAHTIRAVDFN 532
>gi|75759264|ref|ZP_00739364.1| L-serine dehydratase beta subunit [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74493270|gb|EAO56386.1| L-serine dehydratase beta subunit [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 215
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 37/82 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +++ + + + IVN D G + V +IL + INI+ + R +
Sbjct: 127 GGGKIEVVELNGFDLQLSGTSPALLIVNNDRFGAIAAVASILATHEINISTMSVSRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLS 84
A+ + D + + V+E++
Sbjct: 187 RRALMVIETDELLADEVIEEIK 208
>gi|317009666|gb|ADU80246.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori India7]
Length = 524
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKSIPACLSVHYVVI 524
>gi|317180143|dbj|BAJ57929.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori F32]
Length = 524
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|299536791|ref|ZP_07050099.1| L-serine dehydratase, beta chain [Lysinibacillus fusiformis ZC1]
gi|298727803|gb|EFI68370.1| L-serine dehydratase, beta chain [Lysinibacillus fusiformis ZC1]
Length = 220
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + G I +V+ D G + V N L + +NI H + R +
Sbjct: 126 GGGKIEVSEVNGFKLRLTGGMPAILVVHDDRAGCIANVANCLAMHEVNIGHMEVSRIERG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + +D +I + VL+++S+ I V +
Sbjct: 186 LTALMVIEVDQNIEDKVLQQISLIPYITKVSKIN 219
>gi|94985433|ref|YP_604797.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Deinococcus geothermalis DSM 11300]
gi|94555714|gb|ABF45628.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Deinococcus geothermalis DSM 11300]
Length = 221
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 34/93 (36%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++Q + + + + D +G++ + + G+NIA R
Sbjct: 123 GGGVIQVTQVQGLGVNFSGASPTVLLRYTDAVGMIARIATTIAADGVNIAALTCTRETRG 182
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ + +D + L L+ +V+
Sbjct: 183 GQALLAIELDAPLSAEALAFLNRWPDTNWVRLL 215
>gi|222629679|gb|EEE61811.1| hypothetical protein OsJ_16432 [Oryza sativa Japonica Group]
Length = 544
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P K+ DV + +I D G++ VG++LGE +N++ +GR +
Sbjct: 451 DGIPHLTKVGSFQVDVSLEGSLILCRQVDQPGMIGAVGSVLGEENVNVSFMSVGRIAPRK 510
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
HA+ + +D S L K+ I
Sbjct: 511 HAVMAIGVDEEPKKSTLTKIGEIPAI 536
>gi|261839790|gb|ACX99555.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori 52]
Length = 524
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|257064328|ref|YP_003144000.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit/L-serine
dehydratase, iron-sulfur-dependent, beta subunit
[Slackia heliotrinireducens DSM 20476]
gi|256791981|gb|ACV22651.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit/L-serine
dehydratase, iron-sulfur-dependent, beta subunit
[Slackia heliotrinireducens DSM 20476]
Length = 552
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 41/97 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I ++ +D + I D G++ ++ N L +GINIA + R +
Sbjct: 133 GGGAAVITRINGVDVRLDGEYHSLVISQKDAKGVLAYIANCLNVFGINIATTRMYRKRKG 192
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ A + + D I + E + N I + + ++
Sbjct: 193 DVAFTIMQTDDEIPEAAREAICCNPLIFDARIIKSDL 229
>gi|225388457|ref|ZP_03758181.1| hypothetical protein CLOSTASPAR_02193 [Clostridium asparagiforme
DSM 15981]
gi|225045486|gb|EEG55732.1| hypothetical protein CLOSTASPAR_02193 [Clostridium asparagiforme
DSM 15981]
Length = 253
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I ++ + + +++ D G + V +L + G+NI +F L R Q
Sbjct: 158 GGGNILVREINGMDVSITGQHTTLIVLHRDAPGTIASVTEVLADAGVNICNFRLSREQKG 217
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + IDGS + +K+ V I +
Sbjct: 218 GQAVMTIEIDGSFGQELNDKVQVLPNIFSSTMLQ 251
>gi|325188027|emb|CCA22570.1| unnamed protein product [Albugo laibachii Nc14]
Length = 641
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Query: 1 VFSDGKPRFIKIQEINF--DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR 58
VF + +PR ++I E N ++ N D+ G+V + L INIA+F L R
Sbjct: 544 VFGE-EPRIVRIDEYNNFPSFRPEGNLLLFRNQDLPGVVARILKELAISKINIANFGLAR 602
Query: 59 SQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D + + L + ++ +
Sbjct: 603 QDNVPLALGILALDAPPSTTTMATLRDLKDVESLQMVQI 641
>gi|291484136|dbj|BAI85211.1| L-serine dehydratase beta chain [Bacillus subtilis subsp. natto
BEST195]
Length = 220
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + I +V+ D G + V N+L ++ IN+ H + R
Sbjct: 126 GGGKIEITELNGFELRLSGNHPAILVVHNDKFGTIAGVANVLAKFSINVGHMEVARKDIG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ + +D +I + +L++LS I V +
Sbjct: 186 QLALMTIEVDQNIDDHILDELSKLPNIIQVTKI 218
>gi|303228896|ref|ZP_07315707.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Veillonella atypica ACS-134-V-Col7a]
gi|303231195|ref|ZP_07317933.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Veillonella atypica ACS-049-V-Sch6]
gi|302514102|gb|EFL56106.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Veillonella atypica ACS-049-V-Sch6]
gi|302516422|gb|EFL58353.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Veillonella atypica ACS-134-V-Col7a]
Length = 220
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 35/94 (37%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ ++ + + + + + D G + + L E INIA + R
Sbjct: 125 GGGQIMITEVDGNDMSITGDEFTLVVFHEDRPGAISLISQALSESDINIASMRVFRKGKY 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A+ + D + ++ + I+ V FE
Sbjct: 185 KDAVMVITTDSVVNPITVQFMRECPGIQDVMTFE 218
>gi|330466217|ref|YP_004403960.1| D-3-phosphoglycerate dehydrogenase [Verrucosispora maris AB-18-032]
gi|328809188|gb|AEB43360.1| D-3-phosphoglycerate dehydrogenase [Verrucosispora maris AB-18-032]
Length = 532
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 38/74 (51%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
+ ++ + ++ +++ + AD G+V VG +LGE GINIA + R ++ +
Sbjct: 439 IKLTEVDGFDVEIGAEGILLFLRYADRPGVVGTVGTLLGEAGINIAAMQVARREAGGETL 498
Query: 67 SFLCIDGSILNSVL 80
L +D ++ +L
Sbjct: 499 MTLTVDQALGADLL 512
>gi|16078648|ref|NP_389467.1| L-serine dehydratase beta chain [Bacillus subtilis subsp. subtilis
str. 168]
gi|221309460|ref|ZP_03591307.1| L-serine dehydratase (beta chain) [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313785|ref|ZP_03595590.1| L-serine dehydratase (beta chain) [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318709|ref|ZP_03600003.1| L-serine dehydratase (beta chain) [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322980|ref|ZP_03604274.1| L-serine dehydratase (beta chain) [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321315351|ref|YP_004207638.1| L-serine dehydratase subunit beta [Bacillus subtilis BSn5]
gi|6094257|sp|O34635|SDHB_BACSU RecName: Full=Probable L-serine dehydratase, beta chain; Short=SDH;
AltName: Full=L-serine deaminase; Short=L-SD
gi|2337814|emb|CAA74258.1| putative YhaQ protein [Bacillus subtilis subsp. subtilis str. 168]
gi|2633957|emb|CAB13458.1| L-serine dehydratase (beta chain) [Bacillus subtilis subsp.
subtilis str. 168]
gi|320021625|gb|ADV96611.1| L-serine dehydratase (beta chain) [Bacillus subtilis BSn5]
Length = 220
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + I +V+ D G + V N+L ++ IN+ H + R
Sbjct: 126 GGGKIEITELNGFELRLSGNHPAILVVHNDKFGTIAGVANVLAKFSINVGHMEVARKDIG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ + +D +I + +L++LS I V +
Sbjct: 186 QLALMTIEVDQNIDDHILDELSKLPNIIQVTKI 218
>gi|126649659|ref|ZP_01721895.1| L-serine dehydratase beta subunit [Bacillus sp. B14905]
gi|126593378|gb|EAZ87323.1| L-serine dehydratase beta subunit [Bacillus sp. B14905]
Length = 220
Score = 86.2 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 42/94 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + G I +V+ D G + V N L + +NI H + R +
Sbjct: 126 GGGKIEVSEVNGFKLRLTGGMPAILVVHDDRAGCIANVANCLAMHEVNIGHMEVSRIERG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + +D +I + VL+++S+ I V +
Sbjct: 186 LTALMVIEVDQNIEDKVLQQISLIPYITKVSKIN 219
>gi|323703732|ref|ZP_08115372.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Desulfotomaculum nigrificans DSM 574]
gi|323531320|gb|EGB21219.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Desulfotomaculum nigrificans DSM 574]
Length = 220
Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 33/94 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +I+ + + + + D G + V +L INI H + R
Sbjct: 126 GGGKITITEIEGFKISLSGESPTLLVFHRDRFGAIAAVAKVLANNEINIGHMEVARKSKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A+ + D + ++ ++ + V
Sbjct: 186 DLALMVIETDQDLSVDIIGEVEQIDLVYKVALIN 219
>gi|282849852|ref|ZP_06259236.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Veillonella parvula ATCC 17745]
gi|282580789|gb|EFB86188.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Veillonella parvula ATCC 17745]
Length = 229
Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 36/94 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ ++ + + + + + D G + V L E INIA H+ R
Sbjct: 134 GGGQIMITEVDGNDMSITGDEFTLVVFHEDRPGAISLVSQALSESDINIATMHVFRKGKH 193
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A+ + D + ++ + I+ V FE
Sbjct: 194 KDAVMVITTDTVVNPITVQFMREFPGIQDVMTFE 227
>gi|150019310|ref|YP_001311564.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium beijerinckii NCIMB 8052]
gi|149905775|gb|ABR36608.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium beijerinckii NCIMB 8052]
Length = 226
Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 37/94 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + +++ D + I + D G++ V +IL IN+A + R Q
Sbjct: 127 GGGNIQVVEVNNNKVDFTGIYETLIIAHKDAPGVINSVTSILYSENINVAFMRVFRQQKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
AI +D + N ++EK+ + V
Sbjct: 187 HEAIMIFEMDNKVNNILIEKIKEIELVHNVISIS 220
>gi|319761665|ref|YP_004125602.1| d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein
[Alicycliphilus denitrificans BC]
gi|330823536|ref|YP_004386839.1| phosphoglycerate dehydrogenase [Alicycliphilus denitrificans K601]
gi|317116226|gb|ADU98714.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Alicycliphilus denitrificans BC]
gi|329308908|gb|AEB83323.1| Phosphoglycerate dehydrogenase [Alicycliphilus denitrificans K601]
Length = 409
Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ ++ G++ + +IL + INIA +L +++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHRNVPGVLSQINSILSDNQINIAGQYLQTNEAVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + LEKL+ +
Sbjct: 383 DLDARSSDLALEKLAQVPGTIRSRVL 408
>gi|260654330|ref|ZP_05859820.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Jonquetella anthropi E3_33 E1]
gi|260630963|gb|EEX49157.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Jonquetella anthropi E3_33 E1]
Length = 225
Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 33/83 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I + +D + + + D GI+ + + + GINIA L R
Sbjct: 123 GGGMVLLTSINGFDVAIDGMSTTLVVPHRDQPGIISALSSEMTHRGINIASMRLSRKFRG 182
Query: 63 EHAISFLCIDGSILNSVLEKLSV 85
+ A++ + +D + + + L
Sbjct: 183 DQAVAVMEVDSPVDEPLRKVLEA 205
>gi|238018592|ref|ZP_04599018.1| hypothetical protein VEIDISOL_00422 [Veillonella dispar ATCC 17748]
gi|237865063|gb|EEP66353.1| hypothetical protein VEIDISOL_00422 [Veillonella dispar ATCC 17748]
Length = 220
Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 35/94 (37%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ ++ + + + + + D G + V L E INIA + R
Sbjct: 125 GGGQIMITEVDGNDMSITGDEFTLVVFHEDRPGAISLVSQALSESDINIATMRVFRKGKH 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A+ + D + ++ + I+ V FE
Sbjct: 185 KDAVMVITTDTVVNPITVQFMRECPGIQDVMTFE 218
>gi|302780109|ref|XP_002971829.1| hypothetical protein SELMODRAFT_412481 [Selaginella moellendorffii]
gi|300160128|gb|EFJ26746.1| hypothetical protein SELMODRAFT_412481 [Selaginella moellendorffii]
Length = 625
Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 40/86 (46%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG ++ + + DV + +I D GI+ VG +LG+ +N++ +GR+ +
Sbjct: 532 DGLAHLSQVGQFSMDVSLEGSVILCKQVDQPGIIGKVGGLLGDGNVNVSFMSVGRTSPRK 591
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +D VL ++ +
Sbjct: 592 QAVMAIGVDEEPSKEVLHRIGAIPAV 617
>gi|325570752|ref|ZP_08146478.1| L-serine ammonia-lyase beta subunit [Enterococcus casseliflavus
ATCC 12755]
gi|325156598|gb|EGC68778.1| L-serine ammonia-lyase beta subunit [Enterococcus casseliflavus
ATCC 12755]
Length = 221
Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G IV+ D+ G++ V N+L E INI + R
Sbjct: 129 GGGNIQISELNGFKISLTLGTPTYVIVHQDVPGMIAKVTNLLSEAQINIGTMTVTREAVG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ AI + +D + + +++ V +
Sbjct: 189 DKAIMIIEVDQR-NDQLAQQIKVLPHVYSA 217
>gi|145593787|ref|YP_001158084.1| D-3-phosphoglycerate dehydrogenase [Salinispora tropica CNB-440]
gi|145303124|gb|ABP53706.1| D-3-phosphoglycerate dehydrogenase [Salinispora tropica CNB-440]
Length = 531
Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 43/85 (50%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++ + ++ +++ + AD G+V VG +LGE G+NIA + R ++ +
Sbjct: 439 KLTEVDGFDVEIGAEGILVFLRYADRPGVVGAVGTLLGEAGVNIAAMQVARREAGGETLM 498
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFV 92
L +D ++ +L ++ +V V
Sbjct: 499 TLTVDQALGADLLTSVADSVGATSV 523
>gi|313893040|ref|ZP_07826617.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Veillonella sp. oral taxon 158 str. F0412]
gi|313442393|gb|EFR60808.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Veillonella sp. oral taxon 158 str. F0412]
Length = 220
Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 34/94 (36%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ + + + + + D G + + L E INIA + R
Sbjct: 125 GGGLIMITEVDGNDMSITGDEFTLVVFHEDRPGAISLISQALSESDINIATMRVFRKGKH 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A+ + D + ++ + I+ V FE
Sbjct: 185 KDAVMVITTDSVVNPITVQFMRECPGIQDVMTFE 218
>gi|227873626|ref|ZP_03991864.1| L-serine ammonia-lyase [Oribacterium sinus F0268]
gi|227840544|gb|EEJ50936.1| L-serine ammonia-lyase [Oribacterium sinus F0268]
Length = 222
Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEY--GINIAHFHLGRSQ 60
G R I + D I +++ D G++ V I+ + +NI +F L R +
Sbjct: 125 GGGNIRVDVINGLRVDFTGESNTILVLHRDKPGMIALVTQIMYDKYKDLNIGNFRLSRPE 184
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + ID ++++++ +
Sbjct: 185 KGGIALMTIEIDQMPPEELMDEINKLPNVENALLIR 220
>gi|238063230|ref|ZP_04607939.1| D-3-phosphoglycerate dehydrogenase [Micromonospora sp. ATCC 39149]
gi|237885041|gb|EEP73869.1| D-3-phosphoglycerate dehydrogenase [Micromonospora sp. ATCC 39149]
Length = 532
Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 40/85 (47%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++ + ++ +++ + D G+V VG +LGE GINIA + R ++ +
Sbjct: 440 KLTEVDGFDVEIGAEGILLFLRYVDRPGVVGTVGTLLGEAGINIAAMQVARREAGGETLM 499
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFV 92
L +D ++ +L + ++
Sbjct: 500 TLTVDQALGADLLTSAADSIGATSA 524
>gi|294794518|ref|ZP_06759654.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Veillonella sp. 3_1_44]
gi|294454848|gb|EFG23221.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Veillonella sp. 3_1_44]
Length = 229
Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 35/94 (37%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ ++ + + + + + D G + V L E INIA + R
Sbjct: 134 GGGQIMITEVDGNDMSITGDEFTLVVFHEDRPGAISLVSQALSESDINIATMRVFRKGKH 193
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A+ + D + ++ + I+ V FE
Sbjct: 194 KDAVMVITTDTVVNPITVQFMREFPGIQDVMTFE 227
>gi|257867887|ref|ZP_05647540.1| L-serine dehydratase [Enterococcus casseliflavus EC30]
gi|257874216|ref|ZP_05653869.1| L-serine dehydratase [Enterococcus casseliflavus EC10]
gi|257876781|ref|ZP_05656434.1| L-serine dehydratase [Enterococcus casseliflavus EC20]
gi|257801970|gb|EEV30873.1| L-serine dehydratase [Enterococcus casseliflavus EC30]
gi|257808380|gb|EEV37202.1| L-serine dehydratase [Enterococcus casseliflavus EC10]
gi|257810947|gb|EEV39767.1| L-serine dehydratase [Enterococcus casseliflavus EC20]
Length = 221
Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + +G IV+ D+ G++ V N+L E INI + R
Sbjct: 129 GGGNIQISELNGFKISLTLGTPTYVIVHQDVPGMIAKVTNLLSEAQINIGTMTVTREAVG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ AI + +D + + +++ V +
Sbjct: 189 DKAIMIIEVDQR-NDQLAQQIKVLPHVYSA 217
>gi|257054946|ref|YP_003132778.1| D-3-phosphoglycerate dehydrogenase [Saccharomonospora viridis DSM
43017]
gi|256584818|gb|ACU95951.1| D-3-phosphoglycerate dehydrogenase [Saccharomonospora viridis DSM
43017]
Length = 531
Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 1 VFSDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRS 59
V + I++ +FD+ M+ + D GI+ VG +LGE GINI + ++
Sbjct: 433 VTGKDDVHKLIEVNGRHFDIRAEGHMLLLEYPDRPGIMGRVGTLLGEAGINIEAAQISQT 492
Query: 60 QSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
+ A+ L +D ++ +L+ + V + ++ F+
Sbjct: 493 TNRADAVMLLRVDRAVNAHMLDPIGATVDAKMIRAVNFD 531
>gi|302542286|ref|ZP_07294628.1| phosphoglycerate dehydrogenase [Streptomyces hygroscopicus ATCC
53653]
gi|302459904|gb|EFL22997.1| phosphoglycerate dehydrogenase [Streptomyces himastatinicus ATCC
53653]
Length = 533
Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 43/94 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + + E + D+ + M + D G+V +G ILGE GINIA + R+
Sbjct: 439 KNLQKIVAVGEYDVDLALADHMAFLRYTDRPGVVGTLGRILGEAGINIAGMQVSRAAVGG 498
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D +I SVL +++ + +
Sbjct: 499 AALVALTVDDTIPQSVLTEIAEEIGATSARSVNL 532
>gi|269798579|ref|YP_003312479.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Veillonella parvula DSM 2008]
gi|269095208|gb|ACZ25199.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Veillonella parvula DSM 2008]
Length = 229
Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 35/94 (37%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ ++ + + + + + D G + V L E INIA + R
Sbjct: 134 GGGQIMITEVDGNDMSITGDEFTLVVFHEDRPGAISLVSQALSESDINIATMRVFRKGKH 193
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A+ + D + ++ + I+ V FE
Sbjct: 194 KDAVMVITTDTVVNPITVQFMRECPGIQDVMTFE 227
>gi|258645797|ref|ZP_05733266.1| phosphoglycerate dehydrogenase [Dialister invisus DSM 15470]
gi|260403167|gb|EEW96714.1| phosphoglycerate dehydrogenase [Dialister invisus DSM 15470]
Length = 530
Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 41/96 (42%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + + + + D + +I + + G++ + ILG+ G+NI +G S+
Sbjct: 431 LFDRKEAKIVSLDHFRVDFEPKGCIILAPHENKPGMIGQMSGILGKAGVNINGMQVGASK 490
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
I + ID I +++L L+ I +
Sbjct: 491 DKNTNIMAVAIDKDIPSAILPVLANIDGIHGITVIH 526
>gi|307720842|ref|YP_003891982.1| D-3-phosphoglycerate dehydrogenase [Sulfurimonas autotrophica DSM
16294]
gi|306978935|gb|ADN08970.1| D-3-phosphoglycerate dehydrogenase [Sulfurimonas autotrophica DSM
16294]
Length = 528
Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F DG R + + + + +I N+D+ G++ VG IL +NI+ F L R++
Sbjct: 433 IFEDGLQRIVATDGFDIEFPVKGDIIFFKNSDVPGVIGSVGTILANNNVNISDFSLARNE 492
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
+ A++ + +D ++ ++ L +L+ V
Sbjct: 493 QS-EALAVILVDNAVNDTTLSELASLDACISVNY 525
>gi|255019203|ref|ZP_05291329.1| hypothetical protein LmonF_18231 [Listeria monocytogenes FSL
F2-515]
Length = 177
Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 36/80 (45%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK I++ E + I I++ D G + V +++ ++ INI + R
Sbjct: 97 GGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVSRKVKG 156
Query: 63 EHAISFLCIDGSILNSVLEK 82
+ A+ + +D + +++ K
Sbjct: 157 DEALMVIEVDQQVEQALIAK 176
>gi|124486358|ref|YP_001030974.1| D-3-phosphoglycerate dehydrogenase [Methanocorpusculum labreanum Z]
gi|124363899|gb|ABN07707.1| D-3-phosphoglycerate dehydrogenase [Methanocorpusculum labreanum Z]
Length = 527
Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 42/91 (46%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
PR + I + D+ +I + + G+V VG ILG++ +NI+ +G ++
Sbjct: 437 PRILSIGKYATDLVPSGYVILADHVNRPGVVGPVGMILGKHNVNISSMQVGGRNVGSESL 496
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D + V+++++ + I K
Sbjct: 497 MILAVDDIVSPEVMQEVASSDGITAAKFVRL 527
>gi|182419137|ref|ZP_02950391.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium butyricum 5521]
gi|237669226|ref|ZP_04529208.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium butyricum E4 str. BoNT E BL5262]
gi|182377092|gb|EDT74662.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium butyricum 5521]
gi|237655113|gb|EEP52671.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium butyricum E4 str. BoNT E BL5262]
Length = 226
Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 35/94 (37%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + D + + + D+ G++ + +IL IN+A + R +
Sbjct: 127 GGGNIKICEVNDNEVDFTGMYETLIVQHKDVPGVIHSITHILYSENINVAFMRVFRDRKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E A +D + +K+ + V
Sbjct: 187 EDATMIFEMDNKVSIETRKKIESLELVYKVISIS 220
>gi|291458214|ref|ZP_06597604.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Oribacterium sp. oral taxon 078 str. F0262]
gi|291418747|gb|EFE92466.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Oribacterium sp. oral taxon 078 str. F0262]
Length = 240
Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEY--GINIAHFHLGRSQ 60
G R + + D I +++ D G++ V N++ E INI +F L R +
Sbjct: 143 GGGNIRVDFVNGLRVDFTGENNTILVLHRDRPGLIASVTNLIYEEYRDINIGNFRLSRRE 202
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + ID + ++E + +
Sbjct: 203 RGGLALMTIEIDQVPPDQMVEAIQNLRDVEKALLIR 238
>gi|149183208|ref|ZP_01861654.1| L-serine dehydratase (beta chain) [Bacillus sp. SG-1]
gi|148849073|gb|EDL63277.1| L-serine dehydratase (beta chain) [Bacillus sp. SG-1]
Length = 221
Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + I +V+ D G + V +L + INI H + R +
Sbjct: 126 GGGKIEVTELNGFELKLTGHHPAILVVHEDRFGAIAAVSQVLANHEINIGHMDVSRKEVG 185
Query: 63 EHAISFLCIDG-SILNSVLEKLSVNVTIRFVKQF 95
+ A+ + ID +I + V+++L + V
Sbjct: 186 KMALMTIEIDQNNIDDKVIDELKALANVTQVTMI 219
>gi|78189340|ref|YP_379678.1| D-3-phosphoglycerate dehydrogenase [Chlorobium chlorochromatii
CaD3]
gi|78171539|gb|ABB28635.1| D-3-phosphoglycerate dehydrogenase [Chlorobium chlorochromatii
CaD3]
Length = 538
Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 39/97 (40%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + R + + + + ++ N D ++ V +L + +A+ L
Sbjct: 442 VFGEKEVRIVMVDQFLLEFKPEGSILLYTNNDQPDVIARVTQLLLAHHCAMAYLALSLDD 501
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+S L ++G + N +LE + + + E
Sbjct: 502 LHNSAMSALVVNGKVTNDLLEAIKQLEGVTSLSLLEL 538
>gi|208434953|ref|YP_002266619.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori G27]
gi|208432882|gb|ACI27753.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori G27]
Length = 524
Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEYILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|134102592|ref|YP_001108253.1| D-3-phosphoglycerate dehydrogenase [Saccharopolyspora erythraea
NRRL 2338]
gi|291004723|ref|ZP_06562696.1| D-3-phosphoglycerate dehydrogenase [Saccharopolyspora erythraea
NRRL 2338]
gi|133915215|emb|CAM05328.1| D-3-phosphoglycerate dehydrogenase (PgdH) [Saccharopolyspora
erythraea NRRL 2338]
Length = 531
Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ +++ +FD+ ++ + D G++ VG +LGE G+NI + ++ A+
Sbjct: 441 KIVEVNGRHFDLRAEGNVLLLEYPDRPGVMGKVGTLLGEVGVNIEAATVSQTTERSDAVM 500
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
L +D + VLE + V R V+ F
Sbjct: 501 LLRVDRPVDAGVLEPIGAAVGARVVRAVTFE 531
>gi|126643167|ref|YP_001086151.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter baumannii ATCC
17978]
Length = 315
Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI + G+ + ++ ++ G++ + N+ E GINI+ L + +
Sbjct: 231 VNFPEIALPLTAGQHRLLHIHKNVPGVLSKINNLFAEQGINISGQSLMT--KGDIGYLVM 288
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D S L+ L V+
Sbjct: 289 DVDASASQEALDMLHEVEGTIRVRVL 314
>gi|88856753|ref|ZP_01131408.1| D-3-phosphoglycerate dehydrogenase [marine actinobacterium
PHSC20C1]
gi|88814050|gb|EAR23917.1| D-3-phosphoglycerate dehydrogenase [marine actinobacterium
PHSC20C1]
Length = 530
Score = 84.7 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 41/90 (45%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I + +V + +I ++ D GIV G G+ INIA + R +A+S
Sbjct: 438 KIVEINGYDIEVPLADHLIVMMYEDRTGIVAVFGKEFGDAEINIAGMQIARESEGGNALS 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D VL ++ + R+V +
Sbjct: 498 VLTVDSQASAEVLATVAERIDARYVHAIDI 527
>gi|308063839|gb|ADO05726.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori Sat464]
Length = 524
Score = 84.7 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 429 VFEEYILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A++ + +D + VLE+L V
Sbjct: 489 Q-KEALALIIVDEEVSLEVLEELKNIPACLSVHYVVI 524
>gi|255568067|ref|XP_002525010.1| d-3-phosphoglycerate dehydrogenase, putative [Ricinus communis]
gi|223535718|gb|EEF37382.1| d-3-phosphoglycerate dehydrogenase, putative [Ricinus communis]
Length = 633
Score = 84.7 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G P ++ DV + +I D G++ VGNILGE+ +N++ +GR+
Sbjct: 541 GIPHLTRVGSFAVDVSLEGNLILCRQVDQPGMIGRVGNILGEHNVNVSFMSVGRTVRRNQ 600
Query: 65 AISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D L K+ I
Sbjct: 601 AIMAIGVDEEPQGQALVKIGEVSAI 625
>gi|260549913|ref|ZP_05824129.1| phosphoglycerate dehydrogenase [Acinetobacter sp. RUH2624]
gi|260407163|gb|EEX00640.1| phosphoglycerate dehydrogenase [Acinetobacter sp. RUH2624]
Length = 410
Score = 84.7 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI + G+ + ++ ++ G++ + N+ E GINI+ L + +
Sbjct: 326 VNFPEIALPLTAGQHRLLHIHKNVPGVLSKINNLFAEQGINISGQSLMT--KGDIGYLIM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D S L+ L V+
Sbjct: 384 DVDASASQEALDTLHEVEGTIRVRVL 409
>gi|169794522|ref|YP_001712315.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter baumannii AYE]
gi|184159670|ref|YP_001848009.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter baumannii ACICU]
gi|213158906|ref|YP_002320904.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter baumannii AB0057]
gi|215482110|ref|YP_002324292.1| D-3-phosphoglycerate dehydrogenase(PGDH) [Acinetobacter baumannii
AB307-0294]
gi|239501925|ref|ZP_04661235.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter baumannii AB900]
gi|260556956|ref|ZP_05829173.1| phosphoglycerate dehydrogenase [Acinetobacter baumannii ATCC 19606]
gi|294837958|ref|ZP_06782641.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter sp. 6013113]
gi|294843286|ref|ZP_06787969.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter sp. 6014059]
gi|294858700|ref|ZP_06796469.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter sp. 6013150]
gi|301344857|ref|ZP_07225598.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter baumannii AB056]
gi|301512319|ref|ZP_07237556.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter baumannii AB058]
gi|301594826|ref|ZP_07239834.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter baumannii AB059]
gi|169147449|emb|CAM85310.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter baumannii AYE]
gi|183211264|gb|ACC58662.1| Phosphoglycerate dehydrogenase [Acinetobacter baumannii ACICU]
gi|193078532|gb|ABO13549.2| D-3-phosphoglycerate dehydrogenase [Acinetobacter baumannii ATCC
17978]
gi|213058066|gb|ACJ42968.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter baumannii AB0057]
gi|213988009|gb|ACJ58308.1| D-3-phosphoglycerate dehydrogenase(PGDH) [Acinetobacter baumannii
AB307-0294]
gi|260409562|gb|EEX02863.1| phosphoglycerate dehydrogenase [Acinetobacter baumannii ATCC 19606]
gi|322509581|gb|ADX05035.1| serA [Acinetobacter baumannii 1656-2]
gi|323519601|gb|ADX93982.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter baumannii
TCDC-AB0715]
Length = 410
Score = 84.7 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI + G+ + ++ ++ G++ + N+ E GINI+ L + +
Sbjct: 326 VNFPEIALPLTAGQHRLLHIHKNVPGVLSKINNLFAEQGINISGQSLMT--KGDIGYLVM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D S L+ L V+
Sbjct: 384 DVDASASQEALDMLHEVEGTIRVRVL 409
>gi|289450401|ref|YP_003474901.1| L-serine dehydratase subunit beta [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289184948|gb|ADC91373.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 231
Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 36/94 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ I ++ ++ + + + D G + + L + INIA L R
Sbjct: 134 GGGQAVITAINGVDIELSGQYDSLMVQHLDRPGALAKITAHLSKQRINIAALKLYRESKG 193
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+A + + D I +++ ++ + + V
Sbjct: 194 LNAFAIIEADERIPREIVDTIAADKGVIKVILIR 227
>gi|312199422|ref|YP_004019483.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Frankia sp. EuI1c]
gi|311230758|gb|ADP83613.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Frankia sp. EuI1c]
Length = 398
Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F G + + ++ G I ++ ++ G++ + ++L E+ +NI L
Sbjct: 306 FDGGTAMSVNLPYLSLPPRPGGHRIAHLHRNVPGVLAKINSLLAEHKVNIDGQLLDTRGD 365
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ ++ + +D +VL+ L+ V+
Sbjct: 366 YGYVLTDIGVD--YPAAVLDSLAAMPETVRVRLL 397
>gi|124003348|ref|ZP_01688198.1| L-serine dehydratase, beta chain [Microscilla marina ATCC 23134]
gi|123991446|gb|EAY30877.1| L-serine dehydratase, beta chain [Microscilla marina ATCC 23134]
Length = 224
Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 32/93 (34%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G D + I DI G + F+ +L + G NIA ++ R
Sbjct: 128 GGGVINIANYNGFRADFSASMNTLVIKAQDIKGSIAFIAQVLAQDGCNIAAMNVSRKGKN 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A F+ ID + LE L I V
Sbjct: 188 DMACQFIEIDSEVAPITLEYLQHLEWIHDVIYI 220
>gi|298252299|ref|ZP_06976102.1| D-3-phosphoglycerate dehydrogenase [Ktedonobacter racemifer DSM
44963]
gi|297546891|gb|EFH80759.1| D-3-phosphoglycerate dehydrogenase [Ktedonobacter racemifer DSM
44963]
Length = 575
Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 10/103 (9%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST-- 62
+PR +++ + ++ N D G++ G +LG+ +NI H +G +
Sbjct: 473 DEPRIVRVGRYWTEFVPEGYILFCRNLDQPGMIGRAGTLLGKAQVNIRHMDVGPVERKPR 532
Query: 63 --------EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ + +D +I + L +LS I V
Sbjct: 533 TRVPGNTTDTALMVISVDDAIPDWALRELSETGDIFGVTVVNL 575
>gi|325123680|gb|ADY83203.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter calcoaceticus
PHEA-2]
Length = 410
Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI + G+ + ++ ++ G++ + N+ E GINI+ L + +
Sbjct: 326 VNFPEIALPLTAGQHRLLHIHKNVPGVLSKINNLFAEQGINISGQSLMT--KGDIGYLVM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D S L+ L V+
Sbjct: 384 DVDASASQEALDMLHEVEGTIRVRVL 409
>gi|169632282|ref|YP_001706018.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter baumannii SDF]
gi|169151074|emb|CAO99732.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter baumannii]
Length = 410
Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI + G+ + ++ ++ G++ + N+ E GINI+ L + +
Sbjct: 326 VNFPEIALPLTAGQHRLLHIHKNVPGVLSKINNLFAEQGINISGQSLMT--KGDIGYLVM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D S L+ L V+
Sbjct: 384 DVDASASQEALDMLHEVEGTIRVRVL 409
>gi|153953336|ref|YP_001394101.1| hypothetical protein CKL_0700 [Clostridium kluyveri DSM 555]
gi|219853965|ref|YP_002471087.1| hypothetical protein CKR_0622 [Clostridium kluyveri NBRC 12016]
gi|146346217|gb|EDK32753.1| SdhB [Clostridium kluyveri DSM 555]
gi|219567689|dbj|BAH05673.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 227
Score = 84.3 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ-S 61
G ++ + + I I + D+ G+V V +L E+ INIA + R
Sbjct: 127 GGGNVVINEVDKDKIEFTGVYPTILINHLDMPGMVARVSEVLYEHEINIAFMKVYRKSIK 186
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ +D I+ V++++ I V+
Sbjct: 187 GSRAVMVFEVDDFIIKDVVDEIENIPNIYKVRAIN 221
>gi|325833264|ref|ZP_08165770.1| phosphoglycerate dehydrogenase [Eggerthella sp. HGA1]
gi|325485646|gb|EGC88114.1| phosphoglycerate dehydrogenase [Eggerthella sp. HGA1]
Length = 530
Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 36/79 (45%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
R + + D+ + D G V +G ILGE GINI +G + + A+
Sbjct: 439 ARLVSLFGYQLDIAPAGQSLVFEYVDAPGRVGAIGTILGEAGINITTMQIGTKPAEQCAL 498
Query: 67 SFLCIDGSILNSVLEKLSV 85
++ ++G + + VL KL
Sbjct: 499 VYMNVEGDVDDDVLSKLRA 517
>gi|297156963|gb|ADI06675.1| D-3-phosphoglycerate dehydrogenase [Streptomyces bingchenggensis
BCW-1]
Length = 534
Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 43/94 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + + + + + D+ + M + D G+V +G ILGE INIA + RS +
Sbjct: 439 KNQQKIVAVGDYDVDLALADHMAFLRYTDRPGVVGTLGRILGEAEINIAGMQVSRSAAGG 498
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D +I VL +++ + +
Sbjct: 499 AALVALTVDDTIPQPVLTEIAEEIGASSARSVNL 532
>gi|118471239|ref|YP_886720.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium smegmatis str.
MC2 155]
gi|118172526|gb|ABK73422.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium smegmatis str.
MC2 155]
Length = 528
Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 36/78 (46%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I NFD+ + + +D G + +G +LG +NI L + S +HA
Sbjct: 438 KIVQINGRNFDLRAEGHNLIVNYSDKPGALGKIGTLLGGANVNILAAQLSQDASGDHATV 497
Query: 68 FLCIDGSILNSVLEKLSV 85
L +D + + V ++
Sbjct: 498 MLRVDTDVPDDVRAAIAD 515
>gi|309389446|gb|ADO77326.1| L-serine ammonia-lyase [Halanaerobium praevalens DSM 2228]
Length = 223
Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ + + ++D G++ + IL Y +NIA + R +
Sbjct: 127 GGGNIIVSELNGTEVKLKGEYYTLITFHSDKPGLIAKISEILQIYNLNIAEMEVLRKEKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + +D + +L+ LS I +K +
Sbjct: 187 SQATAIINLDQKVEKHILKLLSDIPGINNIKLVK 220
>gi|134299115|ref|YP_001112611.1| L-serine dehydratase, iron-sulfur-dependent subunit beta
[Desulfotomaculum reducens MI-1]
gi|134051815|gb|ABO49786.1| L-serine ammonia-lyase [Desulfotomaculum reducens MI-1]
Length = 221
Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 31/85 (36%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK +I+ + + + + D G + V +L INI H + R
Sbjct: 127 GGGKITITEIEGFKISLSGDSPTLLVFHHDRFGAIAKVAQVLACNEINIGHMEVARRSRG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNV 87
+ A+ + D + N ++ +
Sbjct: 187 DQALMVIETDQDLTNETIKAVKRID 211
>gi|255320181|ref|ZP_05361366.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter radioresistens
SK82]
gi|262380399|ref|ZP_06073553.1| phosphoglycerate dehydrogenase [Acinetobacter radioresistens SH164]
gi|255302620|gb|EET81852.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter radioresistens
SK82]
gi|262297845|gb|EEY85760.1| phosphoglycerate dehydrogenase [Acinetobacter radioresistens SH164]
Length = 410
Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI + G+ + ++ ++ G++ + + E+ INI+ L + +
Sbjct: 326 VNFPEIALPLTEGKHRLLHIHKNMPGVLSKINTLFAEHNINISGQSLMT--KGDVGYLVM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D S L+ L V+
Sbjct: 384 DVDASASQEALDTLHQVEGTIRVRVL 409
>gi|241765438|ref|ZP_04763407.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Acidovorax delafieldii 2AN]
gi|241364811|gb|EER59789.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Acidovorax delafieldii 2AN]
Length = 436
Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ ++ G++ + I E INIA +L ++ + +
Sbjct: 352 VNFPEVALPAHPGKHRLLHIHRNVPGVLSEINRIFSENHINIAAQYLQTNEKIGYV--VI 409
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID + + L+KL+ +
Sbjct: 410 DIDAASSDLALDKLAHVPGTLRSRVL 435
>gi|307326525|ref|ZP_07605720.1| D-3-phosphoglycerate dehydrogenase [Streptomyces violaceusniger Tu
4113]
gi|306887933|gb|EFN18924.1| D-3-phosphoglycerate dehydrogenase [Streptomyces violaceusniger Tu
4113]
Length = 533
Score = 83.9 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ + + + E + D+ + M + D G+V +G ILGE GINIA + R+ + A
Sbjct: 441 QQKIVAVGEYDVDLALADHMAFLRYTDRPGVVGTLGRILGEAGINIAGMQVSRAAAGGAA 500
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ L +D +I VL +++ + +
Sbjct: 501 LVALTVDDTIPQPVLTEIAEEIGASSARSVNL 532
>gi|294651720|ref|ZP_06729021.1| phosphoglycerate dehydrogenase [Acinetobacter haemolyticus ATCC
19194]
gi|292822386|gb|EFF81288.1| phosphoglycerate dehydrogenase [Acinetobacter haemolyticus ATCC
19194]
Length = 410
Score = 83.9 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI + G+ + ++ ++ G++ + + E GINI+ L + +
Sbjct: 326 VNFPEIALPLSDGQHRLLHIHKNVPGVLSKINTLFAEQGINISGQSLMT--KGDIGYLVM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D S L+ L V+
Sbjct: 384 DVDASASQEALDTLHNVEGTIRVRVL 409
>gi|226953795|ref|ZP_03824259.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter sp. ATCC 27244]
gi|226835466|gb|EEH67849.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter sp. ATCC 27244]
Length = 410
Score = 83.9 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI + G+ + ++ ++ G++ + + E GINI+ L + +
Sbjct: 326 VNFPEIALPLSDGQHRLLHIHKNVPGVLSKINTLFAEQGINISGQSLMT--KGDIGYLVM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D S L+ L V+
Sbjct: 384 DVDASASQEALDTLHNVEGTIRVRVL 409
>gi|218679036|ref|ZP_03526933.1| D-3-phosphoglycerate dehydrogenase [Rhizobium etli CIAT 894]
Length = 231
Score = 83.9 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 45/62 (72%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VFSDGKPRFI+I+ IN D D+G MI I N D+ G++ F+G LG G+NIA+F LGR +
Sbjct: 156 VFSDGKPRFIQIKGINLDADVGSHMIYITNTDVPGMIGFIGTTLGTAGVNIANFQLGRDK 215
Query: 61 ST 62
+
Sbjct: 216 AG 217
>gi|262373589|ref|ZP_06066867.1| phosphoglycerate dehydrogenase [Acinetobacter junii SH205]
gi|262311342|gb|EEY92428.1| phosphoglycerate dehydrogenase [Acinetobacter junii SH205]
Length = 410
Score = 83.9 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI + G+ + ++ ++ G++ + + E GINI+ L + +
Sbjct: 326 VNFPEIALPLSDGQHRLLHIHKNVPGVLSKINTLFAEQGINISGQSLMT--KGDIGYLVM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D S L+ L V+
Sbjct: 384 DVDASASQEALDTLHNVEGTIRVRVL 409
>gi|300783616|ref|YP_003763907.1| D-3-phosphoglycerate dehydrogenase [Amycolatopsis mediterranei U32]
gi|299793130|gb|ADJ43505.1| D-3-phosphoglycerate dehydrogenase [Amycolatopsis mediterranei U32]
Length = 532
Score = 83.9 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ +++ FD+ ++ + D G++ VG +LGE GINI + ++ A+
Sbjct: 442 KLVEVNGRGFDLRAEGTVLLVEYPDRPGVMGRVGTLLGEAGINIEAAQISQTTDGSDAVM 501
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
L +D I +LE + +V ++ +FN
Sbjct: 502 LLRVDRHIDAHLLEPIGASVGAHTIRAVDFN 532
>gi|242096578|ref|XP_002438779.1| hypothetical protein SORBIDRAFT_10g026070 [Sorghum bicolor]
gi|241917002|gb|EER90146.1| hypothetical protein SORBIDRAFT_10g026070 [Sorghum bicolor]
Length = 613
Score = 83.9 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 39/86 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P + DV + +I D GI+ VG+ILG+ +N++ +GR+ +
Sbjct: 520 DGAPHLTLVGSFRVDVSLVGNLILCCQVDQPGIIGKVGSILGKMNVNVSFMSVGRTAPGK 579
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D L+ + ++
Sbjct: 580 QAIMAIGVDEEPEKEALKLIGDTPSV 605
>gi|291562725|emb|CBL41541.1| L-serine ammonia-lyase [butyrate-producing bacterium SS3/4]
Length = 225
Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ ++ D+ I + + D G + FV +L Y +NI L R
Sbjct: 127 GGGNAVITRLNGVDVDLTGNYSTIVVQHIDKKGTLAFVTAVLSAYDLNIGSLRLYRESKG 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF-EFNVD 100
+ A + + +D + + V+ L ++ V N+D
Sbjct: 187 KMAYAIIEVDTMVSSQVINALRGFEAVKNVLLVPAINLD 225
>gi|331695673|ref|YP_004331912.1| D-3-phosphoglycerate dehydrogenase [Pseudonocardia dioxanivorans
CB1190]
gi|326950362|gb|AEA24059.1| D-3-phosphoglycerate dehydrogenase [Pseudonocardia dioxanivorans
CB1190]
Length = 533
Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 46/91 (50%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I +FD+ ++ + AD G++ VG++LGE +NI + ++ AI
Sbjct: 443 KLVEINGRHFDLRAEGDILLLEYADRPGVMGRVGSLLGEAAVNIEAAQISQTTDGRDAIM 502
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
L +D I +VLE + +V + V+ +
Sbjct: 503 LLRVDRPIDPAVLEPIGASVGAKTVRLISLD 533
>gi|255527315|ref|ZP_05394194.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium carboxidivorans P7]
gi|296185725|ref|ZP_06854134.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium carboxidivorans P7]
gi|255509005|gb|EET85366.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium carboxidivorans P7]
gi|296049853|gb|EFG89278.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium carboxidivorans P7]
Length = 226
Score = 83.9 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 33/81 (40%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
N + I I + D+ G+V V +L Y INIA + RS A +D I
Sbjct: 140 NIEFTGAYPTILINHVDLPGMVARVSAVLYYYRINIAFMRVYRSGKGSAAAMVFEVDDII 199
Query: 76 LNSVLEKLSVNVTIRFVKQFE 96
+++++ I+ +
Sbjct: 200 SQELIDEIRKIPNIKNARAIN 220
>gi|262370635|ref|ZP_06063960.1| D-3-phosphoglycerate dehydrogenase(PGDH) [Acinetobacter johnsonii
SH046]
gi|262314435|gb|EEY95477.1| D-3-phosphoglycerate dehydrogenase(PGDH) [Acinetobacter johnsonii
SH046]
Length = 410
Score = 83.5 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI + G+ + ++ ++ G++ + N+ E+GINI+ L + +
Sbjct: 326 VNFPEIALPLTEGKHRLLHIHKNVPGVLSKINNLFAEHGINISGQSLMT--KGDVGYLVM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + L+ L V+
Sbjct: 384 DVDATASQEALDTLQDVEGTIRVRVL 409
>gi|326490081|dbj|BAJ94114.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504998|dbj|BAK02886.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 613
Score = 83.5 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 38/88 (43%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG P + + DV + +I D GI+ VG+ILG +N+ +GR +
Sbjct: 520 DGTPHLTLVGPFSVDVSLEGNLILCRQVDQPGIIGKVGSILGTMNLNVNFMSVGRIAPGK 579
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRF 91
AI + ID L+ + +++
Sbjct: 580 QAIMAIGIDEEPEKEALKLIGETPSVQE 607
>gi|150390084|ref|YP_001320133.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Alkaliphilus metalliredigens QYMF]
gi|149949946|gb|ABR48474.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Alkaliphilus metalliredigens QYMF]
Length = 222
Score = 83.5 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 34/88 (38%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+I ++ + I + + D G++ IL EYGINIA + R ++A +
Sbjct: 134 TEINDLKLEFTGEYPTIIVSHKDRPGLIAKTTAILCEYGINIAFMRVYRYHKGQNAFMII 193
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFEF 97
D I+ V+ + I
Sbjct: 194 ETDNEIVPEVVGDIKKVAEIDNAYLISI 221
>gi|256380010|ref|YP_003103670.1| D-3-phosphoglycerate dehydrogenase [Actinosynnema mirum DSM 43827]
gi|255924313|gb|ACU39824.1| D-3-phosphoglycerate dehydrogenase [Actinosynnema mirum DSM 43827]
Length = 532
Score = 83.5 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 47/91 (51%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + +FD+ ++ + +D G++ VG +LGE G+N+ + + + A+
Sbjct: 442 KIVGVNGRSFDLRAEGNVLLLEYSDRPGVMGTVGTLLGEAGVNVEAAQISQQKGGSEALM 501
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
L +D + ++VL+ + +V R ++ F+
Sbjct: 502 LLRVDRPVDSNVLDPIGASVGARTMRSVNFD 532
>gi|310794865|gb|EFQ30326.1| phosphoglycerate dehydrogenase [Glomerella graminicola M1.001]
Length = 567
Score = 83.5 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 37/102 (36%), Gaps = 7/102 (6%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLG----- 57
S K+ + M+ + N D G + VG +LG +GINI +
Sbjct: 466 SGQGIYISKLDRFSATFQPQGTMLVLHNYDEPGKIGGVGTVLGRHGINITFMQVASLDGE 525
Query: 58 --RSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
R++ A+ L + G I V++ L I V
Sbjct: 526 EKRAEGGNEALMILGVKGEIGGEVVKDLKKAEGILNVSLVRM 567
>gi|239817102|ref|YP_002946012.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Variovorax paradoxus S110]
gi|239803679|gb|ACS20746.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Variovorax paradoxus S110]
Length = 410
Score = 83.5 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ ++ G++ + I + INI+ L ++ + +
Sbjct: 326 VNFPEVALPAHPGKHRLLHIHRNVPGVLSEINKIFSDNNINISSQFLQTNEKIGYV--VM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID + + LEKL+ +
Sbjct: 384 DIDAAYSDLALEKLAKVNGTIRSRVL 409
>gi|121604756|ref|YP_982085.1| D-isomer specific 2-hydroxyacid dehydrogenase [Polaromonas
naphthalenivorans CJ2]
gi|120593725|gb|ABM37164.1| D-3-phosphoglycerate dehydrogenase [Polaromonas naphthalenivorans
CJ2]
Length = 409
Score = 83.5 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ ++ G++ + + + INIA +L +++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHRNVPGVLSEINRVFSDNHINIASQYLQTNEAIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID + + L KL+ +
Sbjct: 383 DIDAAHSDMALAKLANVPGTIRSRVL 408
>gi|262280301|ref|ZP_06058085.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter calcoaceticus
RUH2202]
gi|262258079|gb|EEY76813.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter calcoaceticus
RUH2202]
Length = 410
Score = 83.5 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI + G+ + ++ ++ G++ + N+ E GINI+ L + +
Sbjct: 326 VNFPEIALPLTAGQHRLLHIHKNVPGVLSKINNLFAEQGINISGQSLMT--KGDIGYLVM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D S + L+ L V+
Sbjct: 384 DVDASASHEALDMLHEVEGTIRVRVL 409
>gi|159036772|ref|YP_001536025.1| D-3-phosphoglycerate dehydrogenase [Salinispora arenicola CNS-205]
gi|157915607|gb|ABV97034.1| D-3-phosphoglycerate dehydrogenase [Salinispora arenicola CNS-205]
Length = 531
Score = 83.5 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 40/85 (47%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++ + ++ +++ + D G+V VG +LG G+NIA + R ++ +
Sbjct: 439 KLTEVDGFDVEIGAEGILVFLRYVDRPGVVGTVGTLLGAAGVNIAAMQVARREAGGETLM 498
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFV 92
L +D ++ +L ++ +V
Sbjct: 499 TLTVDQALGADLLTSVADSVGATSA 523
>gi|297830606|ref|XP_002883185.1| hypothetical protein ARALYDRAFT_479462 [Arabidopsis lyrata subsp.
lyrata]
gi|297329025|gb|EFH59444.1| hypothetical protein ARALYDRAFT_479462 [Arabidopsis lyrata subsp.
lyrata]
Length = 585
Score = 83.5 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G P K+ DV + +I D G++ V +ILG+ +N++ +GR +
Sbjct: 493 GIPSLTKVGLFGVDVSLEGSVILCRQVDQPGMIGKVASILGDENVNVSFMSVGRIAPGKQ 552
Query: 65 AISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +D L+K+ I
Sbjct: 553 AVMAIGVDEQPSKETLKKIGDIPAI 577
>gi|299768589|ref|YP_003730615.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter sp. DR1]
gi|298698677|gb|ADI89242.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter sp. DR1]
Length = 410
Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI + G+ + ++ ++ G++ + N+ E GINI+ L + +
Sbjct: 326 VNFPEIALPLTAGQHRLLHIHKNVPGVLSKINNLFAEQGINISGQSLMT--KGDIGYLVM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D S + L+ L V+
Sbjct: 384 DVDASASHEALDMLHEVEGTIRVRVL 409
>gi|167758365|ref|ZP_02430492.1| hypothetical protein CLOSCI_00705 [Clostridium scindens ATCC 35704]
gi|167664262|gb|EDS08392.1| hypothetical protein CLOSCI_00705 [Clostridium scindens ATCC 35704]
Length = 387
Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 34/94 (36%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + I +++ ++ ++ IL + +NIA
Sbjct: 296 HGNIQNSVNYPDSDMGLRGKNTRIVLLHHNVPNMIGQFTKILADDNMNIADM--SNKSKG 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+A + + ID + V++ L + V+ E
Sbjct: 354 GYAYTMIDIDSPVPEKVVDDLRKVGEVLRVRVIE 387
>gi|293610749|ref|ZP_06693049.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827093|gb|EFF85458.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 410
Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI + G+ + ++ ++ G++ + N+ E GINI+ L + +
Sbjct: 326 VNFPEIALPLTAGQHRLLHIHKNVPGVLSKINNLFAEQGINISGQSLMT--KGDIGYLVM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D S + L+ L V+
Sbjct: 384 DVDASASHEALDMLHEVEGTIRVRVL 409
>gi|330509011|ref|YP_004385439.1| phosphoglycerate dehydrogenase [Methanosaeta concilii GP-6]
gi|328929819|gb|AEB69621.1| phosphoglycerate dehydrogenase [Methanosaeta concilii GP-6]
Length = 525
Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 41/97 (42%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V + + R +++ + M+ V D I+ +LGE INI H+GR
Sbjct: 429 VSGNKEKRIVQLDLYRTYIPTEGDMVIAVIDDKPNIIGPCCVVLGEGNINIGSMHVGRMD 488
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ + L +D + + ++++L ++ K E
Sbjct: 489 EGQPQLMVLSVDQMVPDDLMKRLLQVPGVKSAKMVEL 525
>gi|111608868|gb|ABH10992.1| phosphoglycerate dehydrogenase [Polytomella parva]
Length = 191
Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G P KI ++ + ++ D GIV +G +L + +NI+ + R +
Sbjct: 97 NGTPFITKIGNFLVELSVQGSVLLTRQRDQPGIVGRIGTLLAKENVNISFMTVSRKDD-K 155
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
AI + +D ++L++++ I F+
Sbjct: 156 EAIMAIGVDSEPSEALLKEINKVNGIIESTVFK 188
>gi|50086287|ref|YP_047797.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter sp. ADP1]
gi|49532263|emb|CAG69975.1| D-3-phosphoglycerate dehydrogenase [Acinetobacter sp. ADP1]
Length = 410
Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI + G+ + ++ +I G++ + N+ E INI+ L + +
Sbjct: 326 VNFPEIALPLTEGKHRLLHIHKNIPGVLSKINNLFAEQNINISGQSLMT--KGDIGYLIM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D S L+ L+ V+
Sbjct: 384 DVDASASQEALDMLNQVEGTIRVRVL 409
>gi|257457493|ref|ZP_05622661.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Treponema vincentii ATCC 35580]
gi|257445116|gb|EEV20191.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Treponema vincentii ATCC 35580]
Length = 220
Score = 82.8 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G KI + I +V+ DI G++ V ++ +Y +N+ F+L R +
Sbjct: 124 GGGNIVITKIDGREVKITGQSPTIIVVHNDIPGMIAAVTALMAQYKLNVYKFNLARDKKG 183
Query: 63 EHAISFLCIDG-SILNSVLEKLSVNVTIRFV 92
AI L IDG S+ + + + V
Sbjct: 184 GTAIMTLQIDGRSLGEDLHAAIEKIPGVIKV 214
>gi|42565022|ref|NP_566637.2| D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative
[Arabidopsis thaliana]
gi|11994471|dbj|BAB02473.1| phosphoglycerate dehydrogenase [Arabidopsis thaliana]
Length = 588
Score = 82.8 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G P K+ DV + +I D G++ V +ILG+ +N++ +GR +
Sbjct: 496 GVPSLTKVGLFGVDVSLEGSVILCRQVDQPGMIGKVASILGDENVNVSFMSVGRIAPGKQ 555
Query: 65 AISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +D L+K+ I
Sbjct: 556 AVMAIGVDEQPSKETLKKIGDIPAI 580
>gi|121593285|ref|YP_985181.1| D-3-phosphoglycerate dehydrogenase [Acidovorax sp. JS42]
gi|120605365|gb|ABM41105.1| D-3-phosphoglycerate dehydrogenase [Acidovorax sp. JS42]
Length = 434
Score = 82.8 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + V+ ++ G++ + +IL + INIA +L ++ + +
Sbjct: 350 VNFPEVALPEHAGKHRLLHVHHNVPGVLSQINSILSDNHINIAAQYLQTNEKIGYV--VI 407
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + LEKL+ +
Sbjct: 408 DLDARSSDLALEKLAQVPGTIRSRVL 433
>gi|295097448|emb|CBK86538.1| D-3-phosphoglycerate dehydrogenase [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 410
Score = 82.8 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L + + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLLHIHENRPGVLTAINQIFAEQGVNIAAQYLQTNSQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D I L+ + +
Sbjct: 384 EADEDIAEKALQSMKAIPGTIRARLL 409
>gi|153853317|ref|ZP_01994726.1| hypothetical protein DORLON_00713 [Dorea longicatena DSM 13814]
gi|149754103|gb|EDM64034.1| hypothetical protein DORLON_00713 [Dorea longicatena DSM 13814]
Length = 387
Score = 82.8 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + + + I +++ ++ ++ + IL + +NIA L
Sbjct: 296 NGNIKHSVNYPDCDMGLRGDKTRILVLHHNVPNMIGQISAILAKDNMNIAD--LTNKSKG 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
++A + + +D + + V+E+L + V+
Sbjct: 354 KYAYTMIDVDSEVPDGVVEELKQIGEVLRVRVI 386
>gi|14596141|gb|AAK68798.1| phosphoglycerate dehydrogenase [Arabidopsis thaliana]
Length = 516
Score = 82.8 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G P K+ DV + +I D G++ V +ILG+ +N++ +GR +
Sbjct: 424 GVPSLTKVGLFGVDVSLEGSVILCRQVDQPGMIGKVASILGDENVNVSFMSVGRIAPGKQ 483
Query: 65 AISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +D L+K+ I
Sbjct: 484 AVMAIGVDEQPSKETLKKIGDIPAI 508
>gi|149377131|ref|ZP_01894880.1| D-3-phosphoglycerate dehydrogenase [Marinobacter algicola DG893]
gi|149358549|gb|EDM47022.1| D-3-phosphoglycerate dehydrogenase [Marinobacter algicola DG893]
Length = 409
Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + + ++ ++ G++ + + E GINI +L + + +
Sbjct: 325 VNFPEVALPSHPNQHRLLHIHENVPGVMSEINQVFSENGINICGQYLQTKEDIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D LEKL +
Sbjct: 383 DVDKEYGELALEKLLKVKGTIRCRVL 408
>gi|37958848|gb|AAP51112.1| putative phosphoglycerate dehydrogenase [uncultured bacterium]
Length = 433
Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + G+ + ++ ++ GI+ + + E GINIA L + + +
Sbjct: 349 VNFPEVSIPLGAGKHRLLHIHENVPGILSNINRVFAENGINIAAQSLMTNDAIG--YLVI 406
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D L+K+ +
Sbjct: 407 DVDAEYSEVALQKIQSIPGTIRSRVL 432
>gi|261342315|ref|ZP_05970173.1| D-3-phosphoglycerate dehydrogenase [Enterobacter cancerogenus ATCC
35316]
gi|288315658|gb|EFC54596.1| D-3-phosphoglycerate dehydrogenase [Enterobacter cancerogenus ATCC
35316]
Length = 410
Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L + + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLLHIHENRPGVLTAINQIFAEQGVNIAAQYLQTNSQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 384 EADEDVAEKALQSMKAIPGTIRARLL 409
>gi|219669853|ref|YP_002460288.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Desulfitobacterium hafniense DCB-2]
gi|219540113|gb|ACL21852.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Desulfitobacterium hafniense DCB-2]
Length = 223
Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 34/84 (40%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ ++ + ++ D+ G+V V +++ INIA + R + HA+ + D
Sbjct: 137 DQFKVEIMGDYHTLVVLQNDLPGVVAQVSSLIAATQINIAQMRVSREKKGAHALMIIETD 196
Query: 73 GSILNSVLEKLSVNVTIRFVKQFE 96
+I + L + + E
Sbjct: 197 QAIDPAALALIKKLPAVNQAMAIE 220
>gi|71735117|ref|YP_276976.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71555670|gb|AAZ34881.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 429
Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 345 VNFPEVALPAHPGKHRLLHIHENIPGVLSEINKVFAENGINISGQFLQTNEKVGYV--VI 402
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + KL +
Sbjct: 403 DVDAEYSDLAQAKLQQIKGTIRSRVL 428
>gi|302865806|ref|YP_003834443.1| D-3-phosphoglycerate dehydrogenase [Micromonospora aurantiaca ATCC
27029]
gi|315502351|ref|YP_004081238.1| d-3-phosphoglycerate dehydrogenase [Micromonospora sp. L5]
gi|302568665|gb|ADL44867.1| D-3-phosphoglycerate dehydrogenase [Micromonospora aurantiaca ATCC
27029]
gi|315408970|gb|ADU07087.1| D-3-phosphoglycerate dehydrogenase [Micromonospora sp. L5]
Length = 532
Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 38/73 (52%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++ + ++ +++ + AD G+V VG +LGE G+NIA + R ++ +
Sbjct: 440 KLTEVDGFDVEIGAEGILVFLRYADRPGVVGTVGTLLGEAGVNIAAMQVARREAGGETLM 499
Query: 68 FLCIDGSILNSVL 80
L +D ++ +L
Sbjct: 500 TLTVDQALGADLL 512
>gi|294101091|ref|YP_003552949.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Aminobacterium colombiense DSM 12261]
gi|293616071|gb|ADE56225.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Aminobacterium colombiense DSM 12261]
Length = 228
Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 3/96 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ N V + + D G+V V + + INIA L R
Sbjct: 125 GGGAVELQQVDGFNVSVSGELPSLITFHQDTHGVVAAVTRLFADMKINIATLSLYRKSKG 184
Query: 63 EHAISFLCID--GSILNSVLEKL-SVNVTIRFVKQF 95
A + +D SV E + + +I V
Sbjct: 185 GKASLVIELDLQSPPHRSVREAIEKAHPSIERVLPL 220
>gi|224152572|ref|XP_002337253.1| predicted protein [Populus trichocarpa]
gi|222838623|gb|EEE76988.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 39/86 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
D KP K+ DV + +I D G++ VGNILGE +N++ +G+ +
Sbjct: 46 DRKPHLTKVDSFGVDVSMEGSLILCSQVDQPGMIGSVGNILGEENVNVSFMSVGKIAPQK 105
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +D L+++ +
Sbjct: 106 QAVMTIGVDEKPSKEALKRIGEIPAV 131
>gi|307297860|ref|ZP_07577666.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermotogales bacterium mesG1.Ag.4.2]
gi|306917120|gb|EFN47502.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermotogales bacterium mesG1.Ag.4.2]
Length = 222
Score = 82.0 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS- 61
G R I + DV + I+NADI G + + + +NI++ L R
Sbjct: 122 GGGSVRITAIDDFETDVTGKYPSLVILNADIPGALSKIVGAISSSDMNISNLFLSRVDPF 181
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + +D +L + ++ V E
Sbjct: 182 RHEALCVVELDNEPDEHLLSAIKRLEVVKKVSYLE 216
>gi|89098295|ref|ZP_01171179.1| L-serine dehydratase (beta chain) [Bacillus sp. NRRL B-14911]
gi|89086844|gb|EAR65961.1| L-serine dehydratase (beta chain) [Bacillus sp. NRRL B-14911]
Length = 219
Score = 82.0 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ + ++ I + D G + V ++L + INI H + R +
Sbjct: 126 GGGTIEITELNSFKLKLSGNPAILVI-HNDQFGAISAVTHVLAMHRINIGHMEVSRKEKG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A+ + +D I V+ +L I +
Sbjct: 185 QMAMMVIEVDQRIDLDVIRELEQLPNITQI 214
>gi|332191510|gb|AEE29631.1| D-3-phosphoglycerate dehydrogenase [Arabidopsis thaliana]
Length = 651
Score = 82.0 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G P + DV + +I D G++ VGNILGE +N+ +GR+ +
Sbjct: 559 GVPHLTCVGSFGVDVSLEGNLILCRQVDQPGMIGQVGNILGEQNVNVNFMSVGRTVLRKQ 618
Query: 65 AISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D N LE++ I
Sbjct: 619 AIMAIGVDEEPDNKTLERIGGVSAI 643
>gi|260904884|ref|ZP_05913206.1| D-3-phosphoglycerate dehydrogenase [Brevibacterium linens BL2]
Length = 530
Score = 82.0 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 38/77 (49%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++ + ++++ ++ D GI+ +G LG INIA + S + A+S
Sbjct: 438 KLTEVNGFDLEIELTDNLLIFRYEDRPGIIGQLGQALGANEINIAGMQVSPSATDNDALS 497
Query: 68 FLCIDGSILNSVLEKLS 84
L +D ++ V++ ++
Sbjct: 498 VLAVDSAVSEEVVKAVA 514
>gi|224153962|ref|XP_002337418.1| predicted protein [Populus trichocarpa]
gi|222839162|gb|EEE77513.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 39/86 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
D KP K+ DV + +I D G++ VGNILGE +N++ +G+ +
Sbjct: 46 DRKPHLTKVDSFGVDVSMEGSLILCSQVDQPGMIGSVGNILGEENVNVSFMSVGKIAPQK 105
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +D L+++ +
Sbjct: 106 QAVMTIGVDEKPSKEALKRIGEIPAV 131
>gi|225869460|ref|YP_002745408.1| L-serine dehydratase, beta chain [Streptococcus equi subsp.
zooepidemicus]
gi|225702736|emb|CAX00881.1| putative L-serine dehydratase, beta chain [Streptococcus equi
subsp. zooepidemicus]
Length = 223
Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 40/90 (44%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + ++ + + + + IV+ DI G++ V +IL INIA + R +
Sbjct: 130 GGGNIQVTELNVFSISLSMNTPTLIIVHQDIPGMIAKVTDILSASDINIAQMTVTRESAG 189
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E AI + +D +++++ + V
Sbjct: 190 EKAIMIIEVDSRDCQVAVKQIATIPNLHNV 219
>gi|209695962|ref|YP_002263892.1| D-3-phosphoglycerate dehydrogenase [Aliivibrio salmonicida LFI1238]
gi|208009915|emb|CAQ80228.1| D-3-phosphoglycerate dehydrogenase [Aliivibrio salmonicida LFI1238]
Length = 409
Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + G + ++ + GI+ + +I + GINIA +L S + +
Sbjct: 325 VNFPEVSLPLHTGTSRLLHIHENRPGILTKINSIFADKGINIAAQYLQTSSEMGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + L KL +
Sbjct: 383 DVEAARSEEALTKLKDIEGTIRARILH 409
>gi|254427684|ref|ZP_05041391.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain,
putative [Alcanivorax sp. DG881]
gi|196193853|gb|EDX88812.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain,
putative [Alcanivorax sp. DG881]
Length = 409
Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + + ++ G++ + + E GINI +L ++ + +
Sbjct: 325 VNFPEVALPPHPDMHRLLHTHKNVPGVLTQINTVFSENGINICGQYLQTNEEIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D LEKL +
Sbjct: 383 DVDKGYSQLALEKLRTIDGTIRTRVL 408
>gi|89895422|ref|YP_518909.1| hypothetical protein DSY2676 [Desulfitobacterium hafniense Y51]
gi|89334870|dbj|BAE84465.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 223
Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 34/84 (40%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ ++ + ++ D+ G+V V +++ INIA + R + HA+ + D
Sbjct: 137 DQFKVEIMGDYHTLVVLQNDLPGVVAQVSSLIAATQINIAQMRVSREKKGAHALMIIETD 196
Query: 73 GSILNSVLEKLSVNVTIRFVKQFE 96
+I + L + + E
Sbjct: 197 QAIDPAALALIKKLPAVNQAMAIE 220
>gi|18394525|ref|NP_564034.1| PGDH (3-PHOSPHOGLYCERATE DEHYDROGENASE); phosphoglycerate
dehydrogenase [Arabidopsis thaliana]
gi|3122858|sp|O04130|SERA_ARATH RecName: Full=D-3-phosphoglycerate dehydrogenase, chloroplastic;
Short=3-PGDH; Flags: Precursor
gi|9802747|gb|AAF99816.1|AC034257_8 D-3-phosphoglycerate dehydrogenase [Arabidopsis thaliana]
gi|2189964|dbj|BAA20405.1| Phosphoglycerate dehydrogenase [Arabidopsis thaliana]
gi|2804258|dbj|BAA24440.1| phosphoglycerate dehydrogenase [Arabidopsis thaliana]
gi|15215740|gb|AAK91415.1| At1g17740/F11A6_16 [Arabidopsis thaliana]
gi|20466083|gb|AAM19963.1| At1g17740/F11A6_16 [Arabidopsis thaliana]
gi|21554130|gb|AAM63210.1| Phosphoglycerate dehydrogenase-like protein [Arabidopsis thaliana]
gi|332191509|gb|AEE29630.1| D-3-phosphoglycerate dehydrogenase [Arabidopsis thaliana]
Length = 624
Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G P + DV + +I D G++ VGNILGE +N+ +GR+ +
Sbjct: 532 GVPHLTCVGSFGVDVSLEGNLILCRQVDQPGMIGQVGNILGEQNVNVNFMSVGRTVLRKQ 591
Query: 65 AISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D N LE++ I
Sbjct: 592 AIMAIGVDEEPDNKTLERIGGVSAI 616
>gi|222110007|ref|YP_002552271.1| d-isomer specific 2-hydroxyacid dehydrogenase [Acidovorax ebreus
TPSY]
gi|221729451|gb|ACM32271.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Acidovorax ebreus TPSY]
Length = 409
Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + V+ ++ G++ + +IL + INIA +L ++ + +
Sbjct: 325 VNFPEVALPEHAGKHRLLHVHHNVPGVLSQINSILSDNHINIAAQYLQTNEKIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + LEKL+ +
Sbjct: 383 DLDARSSDLALEKLAQVPGTIRSRVL 408
>gi|121997370|ref|YP_001002157.1| D-isomer specific 2-hydroxyacid dehydrogenase [Halorhodospira
halophila SL1]
gi|121588775|gb|ABM61355.1| D-3-phosphoglycerate dehydrogenase [Halorhodospira halophila SL1]
Length = 389
Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ +C+VNA++ ++ + ++L ++G+NI + A + +
Sbjct: 305 VNFPDMGMPRSGKGDRLCVVNANVPNMLGQISSLLAQHGLNIDDM--FNKAQEQLAYTLV 362
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++G + ++V E+L + V+
Sbjct: 363 DVEGQVPDAVAEELRAIEGVLKVRVIS 389
>gi|82703309|ref|YP_412875.1| D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
[Nitrosospira multiformis ATCC 25196]
gi|82411374|gb|ABB75483.1| D-3-phosphoglycerate dehydrogenase [Nitrosospira multiformis ATCC
25196]
Length = 399
Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ G + I + + + + NA++ +V + + + G+NI G
Sbjct: 305 NGGITNAVNFPNITMERE-SPYRLAVANANVPNMVGQISTAMAKAGLNIHTM--GNKSRG 361
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E A + + +D + +++++ + V+
Sbjct: 362 EMAYTLVDVDSPVPQETIDEIAAIKGVLNVRYL 394
>gi|110832929|ref|YP_691788.1| D-3-phosphoglycerate dehydrogenase [Alcanivorax borkumensis SK2]
gi|110646040|emb|CAL15516.1| D-3-phosphoglycerate dehydrogenase [Alcanivorax borkumensis SK2]
Length = 409
Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + + ++ G++ + + E GINI +L ++ + +
Sbjct: 325 VNFPEVALPPHPDMHRLLHTHKNVPGVLTQINTVFSENGINICGQYLQTNEEIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D LEKL +
Sbjct: 383 DVDKGYSQLALEKLRTIDGTIRTRVL 408
>gi|307543670|ref|YP_003896149.1| D-3-phosphoglycerate dehydrogenase [Halomonas elongata DSM 2581]
gi|307215694|emb|CBV40964.1| D-3-phosphoglycerate dehydrogenase [Halomonas elongata DSM 2581]
Length = 416
Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Query: 2 FSDGKPRF--IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRS 59
FSD + E+ G+ + ++ ++ G++ + +L E INI +L +
Sbjct: 315 FSDNGTTITSVNFPEVALPAHPGKHRLLHIHENVPGVLSEINRVLSEEDINILGQYLQTN 374
Query: 60 QSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + +D LE LS V+
Sbjct: 375 ERIGYV--VIDVDKEYGPRALEALSKVTHTLRVRVL 408
>gi|301049303|ref|ZP_07196273.1| 4-phosphoerythronate dehydrogenase [Escherichia coli MS 185-1]
gi|300298902|gb|EFJ55287.1| 4-phosphoerythronate dehydrogenase [Escherichia coli MS 185-1]
Length = 208
Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 123 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 181
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 182 EADEDVAEKALQAMKAIPGTIRARLL 207
>gi|325003700|ref|ZP_08124812.1| D-3-phosphoglycerate dehydrogenase [Pseudonocardia sp. P1]
Length = 536
Score = 81.6 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 46/91 (50%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I +FD+ ++ + D G++ VG++LGE +NI + ++ A+
Sbjct: 445 KLVEINGRHFDLRAEGEVVLLEYTDRPGVMGRVGSLLGEAAVNIEAAQISQTTEGTDALM 504
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
L +D I +VLE + +V R ++ F+
Sbjct: 505 LLRVDRHIDPAVLEPIGASVGARTIRLISFD 535
>gi|262273692|ref|ZP_06051505.1| D-3-phosphoglycerate dehydrogenase [Grimontia hollisae CIP 101886]
gi|262222107|gb|EEY73419.1| D-3-phosphoglycerate dehydrogenase [Grimontia hollisae CIP 101886]
Length = 409
Score = 81.6 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E GINIA +L + + +
Sbjct: 325 VNFPEVSLPEHTGSSRLLHIHQNKPGILTKINTIFAEEGINIAGQYLQTNAEYGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ LEKL +
Sbjct: 383 DVETEHSEKALEKLKAIEGTLRARILH 409
>gi|120555730|ref|YP_960081.1| D-3-phosphoglycerate dehydrogenase [Marinobacter aquaeolei VT8]
gi|120325579|gb|ABM19894.1| D-3-phosphoglycerate dehydrogenase [Marinobacter aquaeolei VT8]
Length = 409
Score = 81.6 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + + ++ ++ G++ + + E GIN+ +L + + +
Sbjct: 325 VNFPEVALPSHPNQHRLLHIHENVPGVMSEINQVFSENGINVCGQYLQTKEDIGYV--VV 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + LEKL +
Sbjct: 383 DVDKAYGELALEKLRQVKGTIRCRVL 408
>gi|322437164|ref|YP_004219376.1| D-3-phosphoglycerate dehydrogenase [Acidobacterium sp. MP5ACTX9]
gi|321164891|gb|ADW70596.1| D-3-phosphoglycerate dehydrogenase [Acidobacterium sp. MP5ACTX9]
Length = 570
Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 13/110 (11%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V PR + + I+ + + ++ I N D+ G+V +G ILGE+ INIA+F LGR+
Sbjct: 458 VLHGTSPRLLTLDGIDIEAPLNGTLVSIRNHDVPGVVGRIGTILGEHKINIANFALGRAS 517
Query: 61 ----------STEHAISFLCIDGSIL---NSVLEKLSVNVTIRFVKQFEF 97
A++ + ID L L I V+ E
Sbjct: 518 DTPGRSSQRVPQGQALAVVQIDVPDSHAAAPALAALKQIEAIVSVRLIEL 567
>gi|237802243|ref|ZP_04590704.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331025100|gb|EGI05156.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 409
Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHENIPGVLSEINKVFAENGINISGQFLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + KL +
Sbjct: 383 DVDAEYSDLAQAKLQQIKGTIRSRVL 408
>gi|257791620|ref|YP_003182226.1| D-3-phosphoglycerate dehydrogenase [Eggerthella lenta DSM 2243]
gi|317487964|ref|ZP_07946548.1| phosphoglycerate dehydrogenase [Eggerthella sp. 1_3_56FAA]
gi|257475517|gb|ACV55837.1| D-3-phosphoglycerate dehydrogenase [Eggerthella lenta DSM 2243]
gi|316912946|gb|EFV34471.1| phosphoglycerate dehydrogenase [Eggerthella sp. 1_3_56FAA]
Length = 526
Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 34/79 (43%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
R + + D+ + D G V +G ILGE GINI + + A+
Sbjct: 435 ARLVSLFGYQLDIAPAGQSLVFEYVDAPGRVGTIGTILGEAGINITTMQIATLPGEQCAL 494
Query: 67 SFLCIDGSILNSVLEKLSV 85
++ ++G + + VL KL
Sbjct: 495 VYMNVEGDVDDDVLSKLRA 513
>gi|260889453|ref|ZP_05900716.1| phosphoglycerate dehydrogenase [Leptotrichia hofstadii F0254]
gi|260860864|gb|EEX75364.1| phosphoglycerate dehydrogenase [Leptotrichia hofstadii F0254]
Length = 530
Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + R I I+ + D+ I MI + N D+ G++ VG LG+ INIA ++GR ++
Sbjct: 437 NNEERIISIKNHDVDMAISDNMIYLGNEDVPGVIGAVGATLGKGNINIATMNVGRREN-- 494
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI L +D + L++L I++ + +
Sbjct: 495 SAIMLLTVDSEVGRRSLKELRGLSQIKWAHYLDLTI 530
>gi|254784624|ref|YP_003072052.1| D-3-phosphoglycerate dehydrogenase [Teredinibacter turnerae T7901]
gi|237686760|gb|ACR14024.1| D-3-phosphoglycerate dehydrogenase [Teredinibacter turnerae T7901]
Length = 411
Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + V+ ++ G++ + I E INIA +L +S + +
Sbjct: 327 VNFPEVALPAHREVHRLLHVHQNVPGVMTAINRIFSENNINIAGQYLQTKESVGYV--VI 384
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + + L++L +
Sbjct: 385 DVDSAYSDLALKQLREVEGTVRCRVL 410
>gi|120612294|ref|YP_971972.1| D-3-phosphoglycerate dehydrogenase [Acidovorax citrulli AAC00-1]
gi|120590758|gb|ABM34198.1| D-3-phosphoglycerate dehydrogenase [Acidovorax citrulli AAC00-1]
Length = 409
Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ I ++ ++ G++ + + + INIA +L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRILHIHRNVPGVLSAINQVFADNQINIAAQYLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID +KL+ +
Sbjct: 383 DIDAQSSELAQDKLASVPGTIRSRVL 408
>gi|326318362|ref|YP_004236034.1| phosphoglycerate dehydrogenase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323375198|gb|ADX47467.1| Phosphoglycerate dehydrogenase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 409
Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ I ++ ++ G++ + + + INIA +L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRILHIHRNVPGVLSAINQVFADNQINIAAQYLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID +KL+ +
Sbjct: 383 DIDAQSSELAQDKLASVPGTIRSRVL 408
>gi|298526466|ref|ZP_07013875.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis
94_M4241A]
gi|298496260|gb|EFI31554.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis
94_M4241A]
Length = 424
Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I +FD+ + + I D G + +G +LG G+NI L A
Sbjct: 334 KIVQINGRHFDLRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATI 393
Query: 68 FLCIDGSILNSVLEKLSV 85
L +D + + V ++
Sbjct: 394 LLRLDQDVPDDVRTAIAA 411
>gi|257483777|ref|ZP_05637818.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|289626080|ref|ZP_06459034.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289651108|ref|ZP_06482451.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
aesculi str. 2250]
gi|289672288|ref|ZP_06493178.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
syringae FF5]
gi|298489284|ref|ZP_07007300.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|302187840|ref|ZP_07264513.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
syringae 642]
gi|298156183|gb|EFH97287.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320326268|gb|EFW82321.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
glycinea str. B076]
gi|320331732|gb|EFW87670.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330868960|gb|EGH03669.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330872494|gb|EGH06643.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330891631|gb|EGH24292.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv. mori
str. 301020]
gi|330899116|gb|EGH30535.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330944687|gb|EGH46626.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330954761|gb|EGH55021.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae Cit 7]
gi|330982248|gb|EGH80351.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 409
Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHENIPGVLSEINKVFAENGINISGQFLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + KL +
Sbjct: 383 DVDAEYSDLAQAKLQQIKGTIRSRVL 408
>gi|330974548|gb|EGH74614.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 409
Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHENIPGVLSEINKVFAENGINISGQFLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + KL +
Sbjct: 383 DVDAEYSDLAQAKLQQIKGTIRSRVL 408
>gi|66048076|ref|YP_237917.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
syringae B728a]
gi|63258783|gb|AAY39879.1| Amino acid-binding ACT:D-isomer specific 2-hydroxyacid
dehydrogenase, catalytic region:D-isomer specific
2-hydroxyacid dehydrogenase, NAD-binding [Pseudomonas
syringae pv. syringae B728a]
Length = 409
Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHENIPGVLSEINKVFAENGINISGQFLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + KL +
Sbjct: 383 DVDAEYSDLAQAKLQQIKGTIRSRVL 408
>gi|257125820|ref|YP_003163934.1| D-3-phosphoglycerate dehydrogenase [Leptotrichia buccalis C-1013-b]
gi|257049759|gb|ACV38943.1| D-3-phosphoglycerate dehydrogenase [Leptotrichia buccalis C-1013-b]
Length = 530
Score = 81.2 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + R I I+ + D+ I MI + N D+ G++ VG LG+ INIA ++GR ++
Sbjct: 437 NNEERIISIKNHDVDMAISDNMIYLGNDDVPGVIGAVGATLGKENINIATMNVGRREN-- 494
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
AI L +D + L KL I++ + +
Sbjct: 495 SAIMLLTVDSEVGRKSLNKLKGLSQIKWAHYLDLTI 530
>gi|119475434|ref|ZP_01615787.1| D-3-phosphoglycerate dehydrogenase [marine gamma proteobacterium
HTCC2143]
gi|119451637|gb|EAW32870.1| D-3-phosphoglycerate dehydrogenase [marine gamma proteobacterium
HTCC2143]
Length = 409
Score = 81.2 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + + + G++ + + E INI +L +Q + +
Sbjct: 325 VNFPEVALPAHTDMHRLLHTHRNTPGVMSAINKVFAENNINIRAQYLQTTQDIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID L+KLS +
Sbjct: 383 DIDAEYSELALKKLSAIEGTIRCRVL 408
>gi|194014916|ref|ZP_03053533.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
pumilus ATCC 7061]
gi|194013942|gb|EDW23507.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
pumilus ATCC 7061]
Length = 220
Score = 81.2 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 37/86 (43%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
++ + I +V+ D G + V N+L ++ INI H + R + A+ +
Sbjct: 133 TELNGFELRLSGNHPAILVVHNDRYGTIAAVANVLAKFAINIGHMEVARKDVGQEALMTI 192
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D +I + L +L I V Q
Sbjct: 193 EVDQNIDPAALSELETLPNIIQVTQI 218
>gi|297844730|ref|XP_002890246.1| 3-phosphoglycerate dehydrogenase [Arabidopsis lyrata subsp. lyrata]
gi|297336088|gb|EFH66505.1| 3-phosphoglycerate dehydrogenase [Arabidopsis lyrata subsp. lyrata]
Length = 613
Score = 81.2 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G P + DV + +I D G++ VG+ILGE +N+ +GR+ +
Sbjct: 521 GVPHLTCVGSFGVDVSLEGNLILCRQVDQPGMIGQVGHILGEQNVNVNFMSVGRTVLRKQ 580
Query: 65 AISFLCIDGSILNSVLEKLSVNVTI 89
AI + +D N LE++ I
Sbjct: 581 AIMAIGVDEEPDNKTLERIGGVSAI 605
>gi|325274123|ref|ZP_08140261.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas sp. TJI-51]
gi|324100740|gb|EGB98448.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas sp. TJI-51]
Length = 409
Score = 81.2 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHENIPGVLSEINKVFAENGINISGQFLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + EKL +
Sbjct: 383 DVDAEYSDLAQEKLQQVKGTIRSRVL 408
>gi|291532213|emb|CBL05326.1| L-serine ammonia-lyase [Megamonas hypermegale ART12/1]
Length = 220
Score = 81.2 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 39/90 (43%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + + I IV+ D+ G+V V L Y INIA+ + RS+
Sbjct: 125 GGGNIIISAVNNYEVQLSGKYPSIIIVHQDMPGVVNGVTAALARYNINIAYMKVSRSERG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ + +D +I + ++ S + ++ V
Sbjct: 185 AEALMNIEVDDTISDEAVKACSRVIGVKKV 214
>gi|296104575|ref|YP_003614721.1| D-3-phosphoglycerate dehydrogenase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059034|gb|ADF63772.1| D-3-phosphoglycerate dehydrogenase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 410
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E +NIA +L + + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLLHIHENRPGVLTAINQIFAEQSVNIAAQYLQTNSQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 384 EADEDVAEKALQSMKAIPGTIRARLL 409
>gi|114320086|ref|YP_741769.1| D-3-phosphoglycerate dehydrogenase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226480|gb|ABI56279.1| D-3-phosphoglycerate dehydrogenase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 389
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 5 GKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + E+ +C+VNA++ ++ + L E G+NI + E
Sbjct: 299 GNIRNAVNFPEVVMPRGGKGNRLCVVNANVPNMLGRISTALAEAGLNIDDMY--NKSHEE 356
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + ++G+I SV++ ++ + V+ E
Sbjct: 357 LAYTVVDVEGAIPESVVQAIAEVEGVLRVRVIE 389
>gi|319795436|ref|YP_004157076.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Variovorax paradoxus EPS]
gi|315597899|gb|ADU38965.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Variovorax paradoxus EPS]
Length = 410
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + V+ ++ G++ + I + INI+ L ++ + +
Sbjct: 326 VNFPEVALPAHPGKHRLLHVHKNVPGVLSEINKIFSDNHINISSQFLQTNEKIGYV--VM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID + + LEKL+ +
Sbjct: 384 DIDAASSDLALEKLAKVGGTIRSRVL 409
>gi|146309246|ref|YP_001189711.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas mendocina ymp]
gi|145577447|gb|ABP86979.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas mendocina ymp]
Length = 409
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++A++ G++ + + + GINI+ L + + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHANVPGVMSEINKVFADNGINISGQFLQTNDKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + LEKL +
Sbjct: 383 DVDAEYSDLALEKLQRVNGTIRSRVL 408
>gi|42527015|ref|NP_972113.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Treponema denticola ATCC 35405]
gi|41817439|gb|AAS12024.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Treponema denticola ATCC 35405]
Length = 220
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G KI ++ + + DI G + + ++ ++ INI+ H+GR
Sbjct: 124 GGGNILITKINGKPVELSGKNPTLVVEYQDIPGRIAAITSVTAKHKINISQIHIGRDYRG 183
Query: 63 EHAISFLCIDG-SILNSVLEKLSVNVTIRFVKQFE 96
A L +DG S+ + E + I V +
Sbjct: 184 GTATMCLQMDGLSVGPELKEDILQIDHIYNVILIQ 218
>gi|92112231|ref|YP_572159.1| D-3-phosphoglycerate dehydrogenase [Chromohalobacter salexigens DSM
3043]
gi|91795321|gb|ABE57460.1| D-3-phosphoglycerate dehydrogenase [Chromohalobacter salexigens DSM
3043]
Length = 416
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + E+ + + ++ ++ G++ + +L + GINI+ +L +
Sbjct: 318 NGTTITSVNFPEVALPAHPDKHRLLHIHENVPGVMSEINKVLSDEGINISAQYLQTNS-- 375
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ +D + LE L ++
Sbjct: 376 GVGYVVIDVDKAYGPKALEALKRVNHTLRLRVL 408
>gi|26991831|ref|NP_747256.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas putida KT2440]
gi|148550262|ref|YP_001270364.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas putida F1]
gi|24986946|gb|AAN70720.1|AE016715_9 D-3-phosphoglycerate dehydrogenase [Pseudomonas putida KT2440]
gi|148514320|gb|ABQ81180.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas putida F1]
Length = 409
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHENIPGVLSEINKVFAENGINISGQFLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + EKL +
Sbjct: 383 DVDAEYSDLAQEKLQQVKGTIRSRVL 408
>gi|315039759|ref|XP_003169257.1| D-3-phosphoglycerate dehydrogenase [Arthroderma gypseum CBS 118893]
gi|311337678|gb|EFQ96880.1| D-3-phosphoglycerate dehydrogenase [Arthroderma gypseum CBS 118893]
Length = 562
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 9/104 (8%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S +P +I ++ N D G + VG+I+G G+NI +
Sbjct: 459 SGTQPLISRIDRFATSFVPEGNLLICHNFDSPGKIGVVGSIVGRNGVNINFMSVAPISKG 518
Query: 63 ---------EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D ++ V++ L +
Sbjct: 519 KPQKETNSVDEALMILGVDRAVDECVVKDLVKEGGVLSASVVSL 562
>gi|296127708|ref|YP_003634960.1| D-3-phosphoglycerate dehydrogenase [Brachyspira murdochii DSM
12563]
gi|296019524|gb|ADG72761.1| D-3-phosphoglycerate dehydrogenase [Brachyspira murdochii DSM
12563]
Length = 534
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ R +K+ + + + ++ + + + ++ V +L GINI + +
Sbjct: 433 AKNIARIVKLNDYDVIIKPQPHILVVPHINQPAMIAKVATLLSADGINIGSMSVSENIKG 492
Query: 63 -EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+I + +D SI N V+ K+S + K
Sbjct: 493 SNMSIMAINVDRSIGNDVITKISNIEGVHEPKYVRL 528
>gi|192360714|ref|YP_001980756.1| D-3-phosphoglycerate dehydrogenase [Cellvibrio japonicus Ueda107]
gi|190686879|gb|ACE84557.1| D-3-phosphoglycerate dehydrogenase [Cellvibrio japonicus Ueda107]
Length = 409
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + V+A++ G++ + I + INI+ +L + + +
Sbjct: 325 VNFPEVALPGHPDAHRLLHVHANVPGVLSAINKIFSDNKINISSQYLQTNDKVGYV--VV 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I+ + LE+L +
Sbjct: 383 DINSPYSEAALEQLKKIDGTIRCRVL 408
>gi|167036195|ref|YP_001671426.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas putida GB-1]
gi|166862683|gb|ABZ01091.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Pseudomonas putida GB-1]
Length = 409
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHENIPGVLSEINKVFAENGINISGQFLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + EKL +
Sbjct: 383 DVDAEYSDLAQEKLQQVKGTIRSRVL 408
>gi|313501130|gb|ADR62496.1| SerA [Pseudomonas putida BIRD-1]
Length = 409
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHENIPGVLSEINKVFAENGINISGQFLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + EKL +
Sbjct: 383 DVDAEYSDLAQEKLQQVKGTIRSRVL 408
>gi|283788431|ref|YP_003368296.1| D-3-phosphoglycerate dehydrogenase [Citrobacter rodentium ICC168]
gi|282951885|emb|CBG91601.1| D-3-phosphoglycerate dehydrogenase [Citrobacter rodentium ICC168]
Length = 410
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNQIFAEQGVNIAAQYLQTSAQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 384 EADEDVAEKALQAMKAIPGTIRARLL 409
>gi|226946838|ref|YP_002801911.1| D-3-phosphoglycerate dehydrogenase [Azotobacter vinelandii DJ]
gi|226721765|gb|ACO80936.1| D-3-phosphoglycerate dehydrogenase [Azotobacter vinelandii DJ]
Length = 409
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L +++ + +
Sbjct: 325 VNFPEVALPSHPGKHRLLHIHKNIPGVMSEINKVFAENGINISGQFLQTNETVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D LEKL +
Sbjct: 383 DVDAEYSEMALEKLQQVNGTIRSRVL 408
>gi|300925103|ref|ZP_07141018.1| phosphoglycerate dehydrogenase [Escherichia coli MS 182-1]
gi|300418765|gb|EFK02076.1| phosphoglycerate dehydrogenase [Escherichia coli MS 182-1]
Length = 410
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 384 EADEDVAEKALQAMKAIPGTIRARLL 409
>gi|325474078|gb|EGC77266.1| L-serine dehydratase [Treponema denticola F0402]
Length = 220
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G KI ++ + + DI G + + ++ ++ INI+ H+GR
Sbjct: 124 GGGNILITKINGKPVELSGKNPTLVVEYQDIPGRIAAITSVTAKHKINISQIHIGRDYRG 183
Query: 63 EHAISFLCIDG-SILNSVLEKLSVNVTIRFVKQFE 96
A L +DG S+ + E + I V +
Sbjct: 184 GTATMCLQMDGLSVGPELKEDILQIDHIYNVILIQ 218
>gi|70733196|ref|YP_262969.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas fluorescens Pf-5]
gi|68347495|gb|AAY95101.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas fluorescens Pf-5]
Length = 409
Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHENIPGVMSEINKVFAENGINISGQFLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + EKL +
Sbjct: 383 DVDAEYSDLAQEKLQHINGTIRCRVL 408
>gi|187730934|ref|YP_001881682.1| D-3-phosphoglycerate dehydrogenase [Shigella boydii CDC 3083-94]
gi|187427926|gb|ACD07200.1| phosphoglycerate dehydrogenase [Shigella boydii CDC 3083-94]
Length = 410
Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 384 EADEDVAEKALQAMKAIPGTIRARLL 409
>gi|301327319|ref|ZP_07220572.1| phosphoglycerate dehydrogenase [Escherichia coli MS 78-1]
gi|300846051|gb|EFK73811.1| phosphoglycerate dehydrogenase [Escherichia coli MS 78-1]
Length = 410
Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 384 EADEDVAEKALQAMKAIPGTIRARLL 409
>gi|302503639|ref|XP_003013779.1| hypothetical protein ARB_07891 [Arthroderma benhamiae CBS 112371]
gi|291177345|gb|EFE33139.1| hypothetical protein ARB_07891 [Arthroderma benhamiae CBS 112371]
Length = 575
Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 10/105 (9%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S+ +P +I ++ N D G + VG+ILG+ G+NI +
Sbjct: 471 SESQPLISRIDRFATSFVPEGTLLICHNFDSPGKIGVVGSILGKRGVNINFMSVAPISKG 530
Query: 63 ----------EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D ++ V++ L +
Sbjct: 531 KKQQKEIDSSDEALMILGVDRAVDECVVKALVNEGGVLSASVVSL 575
>gi|320182184|gb|EFW57087.1| D-3-phosphoglycerate dehydrogenase [Shigella boydii ATCC 9905]
Length = 410
Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 384 EADEDVAEKALQAMKAIPGTIRARLL 409
>gi|110643060|ref|YP_670790.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli 536]
gi|191171888|ref|ZP_03033434.1| phosphoglycerate dehydrogenase [Escherichia coli F11]
gi|215488211|ref|YP_002330642.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O127:H6 str.
E2348/69]
gi|300995655|ref|ZP_07181183.1| phosphoglycerate dehydrogenase [Escherichia coli MS 200-1]
gi|312964827|ref|ZP_07779067.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli 2362-75]
gi|110344652|gb|ABG70889.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli 536]
gi|190907923|gb|EDV67516.1| phosphoglycerate dehydrogenase [Escherichia coli F11]
gi|215266283|emb|CAS10712.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O127:H6 str.
E2348/69]
gi|222034606|emb|CAP77348.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli LF82]
gi|300304763|gb|EFJ59283.1| phosphoglycerate dehydrogenase [Escherichia coli MS 200-1]
gi|312290383|gb|EFR18263.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli 2362-75]
gi|312947444|gb|ADR28271.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O83:H1 str.
NRG 857C]
gi|323188689|gb|EFZ73974.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli RN587/1]
gi|324011737|gb|EGB80956.1| phosphoglycerate dehydrogenase [Escherichia coli MS 60-1]
Length = 410
Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 384 EADEDVAEKALQAMKAIPGTIRARLL 409
>gi|320175898|gb|EFW50976.1| D-3-phosphoglycerate dehydrogenase [Shigella dysenteriae CDC
74-1112]
Length = 410
Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 384 EADEDVAEKALQAMKAIPGTIRARLL 409
>gi|262377366|ref|ZP_06070590.1| phosphoglycerate dehydrogenase [Acinetobacter lwoffii SH145]
gi|262307819|gb|EEY88958.1| phosphoglycerate dehydrogenase [Acinetobacter lwoffii SH145]
Length = 410
Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI + G+ + ++ +I G++ + N+ E GINI+ L + +
Sbjct: 326 VNFPEIALPLTEGKHRLLHIHQNIPGVLSKINNLFAEQGINISGQSLMT--KGDVGYLVM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + + L+ LS +
Sbjct: 384 DVDAAASHEALDMLSNVEGTIRARVL 409
>gi|218696508|ref|YP_002404175.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli 55989]
gi|218353240|emb|CAU99172.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli 55989]
Length = 410
Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 384 EADEDVAEKALQAMKAIPGTIRARLL 409
>gi|15803448|ref|NP_289481.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O157:H7
EDL933]
gi|15833038|ref|NP_311811.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
Sakai]
gi|16130814|ref|NP_417388.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli str. K-12
substr. MG1655]
gi|24114165|ref|NP_708675.1| D-3-phosphoglycerate dehydrogenase [Shigella flexneri 2a str. 301]
gi|26249329|ref|NP_755369.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli CFT073]
gi|30064223|ref|NP_838394.1| D-3-phosphoglycerate dehydrogenase [Shigella flexneri 2a str.
2457T]
gi|74313470|ref|YP_311889.1| D-3-phosphoglycerate dehydrogenase [Shigella sonnei Ss046]
gi|82545466|ref|YP_409413.1| D-3-phosphoglycerate dehydrogenase [Shigella boydii Sb227]
gi|89109691|ref|AP_003471.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli str. K-12
substr. W3110]
gi|91212292|ref|YP_542278.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli UTI89]
gi|110806814|ref|YP_690334.1| D-3-phosphoglycerate dehydrogenase [Shigella flexneri 5 str. 8401]
gi|117625142|ref|YP_854130.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli APEC O1]
gi|157156494|ref|YP_001464251.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli E24377A]
gi|157162372|ref|YP_001459690.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli HS]
gi|168747604|ref|ZP_02772626.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4113]
gi|168753855|ref|ZP_02778862.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4401]
gi|168760045|ref|ZP_02785052.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4501]
gi|168766910|ref|ZP_02791917.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4486]
gi|168773457|ref|ZP_02798464.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4196]
gi|168781762|ref|ZP_02806769.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4076]
gi|168785763|ref|ZP_02810770.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC869]
gi|168797478|ref|ZP_02822485.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC508]
gi|170018842|ref|YP_001723796.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli ATCC 8739]
gi|170082472|ref|YP_001731792.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli str. K-12
substr. DH10B]
gi|170683573|ref|YP_001745066.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli SMS-3-5]
gi|188492574|ref|ZP_02999844.1| phosphoglycerate dehydrogenase [Escherichia coli 53638]
gi|191168219|ref|ZP_03030014.1| phosphoglycerate dehydrogenase [Escherichia coli B7A]
gi|193063512|ref|ZP_03044601.1| phosphoglycerate dehydrogenase [Escherichia coli E22]
gi|193067273|ref|ZP_03048241.1| phosphoglycerate dehydrogenase [Escherichia coli E110019]
gi|194426244|ref|ZP_03058799.1| phosphoglycerate dehydrogenase [Escherichia coli B171]
gi|194431787|ref|ZP_03064078.1| phosphoglycerate dehydrogenase [Shigella dysenteriae 1012]
gi|195936531|ref|ZP_03081913.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4024]
gi|208806478|ref|ZP_03248815.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4206]
gi|208811833|ref|ZP_03253162.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4045]
gi|208819354|ref|ZP_03259674.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4042]
gi|209398529|ref|YP_002272388.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4115]
gi|209920366|ref|YP_002294450.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli SE11]
gi|217326934|ref|ZP_03443017.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
TW14588]
gi|218555461|ref|YP_002388374.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli IAI1]
gi|218559904|ref|YP_002392817.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli S88]
gi|218691036|ref|YP_002399248.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli ED1a]
gi|218701620|ref|YP_002409249.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli IAI39]
gi|218706417|ref|YP_002413936.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli UMN026]
gi|227888462|ref|ZP_04006267.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli 83972]
gi|237706440|ref|ZP_04536921.1| D-3-phosphoglycerate dehydrogenase [Escherichia sp. 3_2_53FAA]
gi|238902037|ref|YP_002927833.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli BW2952]
gi|253772247|ref|YP_003035078.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162824|ref|YP_003045932.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli B str. REL606]
gi|254794862|ref|YP_003079699.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
TW14359]
gi|256019289|ref|ZP_05433154.1| D-3-phosphoglycerate dehydrogenase [Shigella sp. D9]
gi|256024577|ref|ZP_05438442.1| D-3-phosphoglycerate dehydrogenase [Escherichia sp. 4_1_40B]
gi|260845581|ref|YP_003223359.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O103:H2 str.
12009]
gi|260857035|ref|YP_003230926.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O26:H11 str.
11368]
gi|260869589|ref|YP_003235991.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O111:H- str.
11128]
gi|261226224|ref|ZP_05940505.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
FRIK2000]
gi|261256521|ref|ZP_05949054.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
FRIK966]
gi|291284231|ref|YP_003501049.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O55:H7 str.
CB9615]
gi|293406411|ref|ZP_06650337.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli FVEC1412]
gi|293412271|ref|ZP_06654994.1| conserved hypothetical protein [Escherichia coli B354]
gi|293416166|ref|ZP_06658806.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli B185]
gi|293449235|ref|ZP_06663656.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli B088]
gi|298382147|ref|ZP_06991744.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli FVEC1302]
gi|300815635|ref|ZP_07095859.1| phosphoglycerate dehydrogenase [Escherichia coli MS 107-1]
gi|300820717|ref|ZP_07100868.1| phosphoglycerate dehydrogenase [Escherichia coli MS 119-7]
gi|300896191|ref|ZP_07114740.1| phosphoglycerate dehydrogenase [Escherichia coli MS 198-1]
gi|300906534|ref|ZP_07124227.1| phosphoglycerate dehydrogenase [Escherichia coli MS 84-1]
gi|300921246|ref|ZP_07137618.1| phosphoglycerate dehydrogenase [Escherichia coli MS 115-1]
gi|300928150|ref|ZP_07143693.1| phosphoglycerate dehydrogenase [Escherichia coli MS 187-1]
gi|300936020|ref|ZP_07150968.1| phosphoglycerate dehydrogenase [Escherichia coli MS 21-1]
gi|300947638|ref|ZP_07161808.1| phosphoglycerate dehydrogenase [Escherichia coli MS 116-1]
gi|300954244|ref|ZP_07166709.1| phosphoglycerate dehydrogenase [Escherichia coli MS 175-1]
gi|300980293|ref|ZP_07174947.1| phosphoglycerate dehydrogenase [Escherichia coli MS 45-1]
gi|301027372|ref|ZP_07190712.1| phosphoglycerate dehydrogenase [Escherichia coli MS 69-1]
gi|301027786|ref|ZP_07191092.1| phosphoglycerate dehydrogenase [Escherichia coli MS 196-1]
gi|301303072|ref|ZP_07209199.1| phosphoglycerate dehydrogenase [Escherichia coli MS 124-1]
gi|301643735|ref|ZP_07243774.1| phosphoglycerate dehydrogenase [Escherichia coli MS 146-1]
gi|306812186|ref|ZP_07446384.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli NC101]
gi|307139600|ref|ZP_07498956.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli H736]
gi|307310469|ref|ZP_07590117.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Escherichia coli W]
gi|309793986|ref|ZP_07688411.1| phosphoglycerate dehydrogenase [Escherichia coli MS 145-7]
gi|312972846|ref|ZP_07787019.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli 1827-70]
gi|331643604|ref|ZP_08344735.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli H736]
gi|331648659|ref|ZP_08349747.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli M605]
gi|331654412|ref|ZP_08355412.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli M718]
gi|331659041|ref|ZP_08359983.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli TA206]
gi|331664486|ref|ZP_08365392.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli TA143]
gi|331669648|ref|ZP_08370494.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli TA271]
gi|331674397|ref|ZP_08375157.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli TA280]
gi|331678900|ref|ZP_08379574.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli H591]
gi|331684538|ref|ZP_08385130.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli H299]
gi|71162364|sp|P0A9T2|SERA_ECO57 RecName: Full=D-3-phosphoglycerate dehydrogenase; Short=PGDH
gi|71162365|sp|P0A9T1|SERA_ECOL6 RecName: Full=D-3-phosphoglycerate dehydrogenase; Short=PGDH
gi|71162366|sp|P0A9T0|SERA_ECOLI RecName: Full=D-3-phosphoglycerate dehydrogenase; Short=PGDH
gi|71162367|sp|P0A9T3|SERA_SHIFL RecName: Full=D-3-phosphoglycerate dehydrogenase; Short=PGDH
gi|12517443|gb|AAG58040.1|AE005521_8 D-3-phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EDL933]
gi|26109737|gb|AAN81942.1|AE016766_30 D-3-phosphoglycerate dehydrogenase [Escherichia coli CFT073]
gi|459755|gb|AAA24625.1| phosphoglycerate dehydrogenase [Escherichia coli]
gi|882442|gb|AAA69080.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli str. K-12
substr. MG1655]
gi|1789279|gb|AAC75950.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli str. K-12
substr. MG1655]
gi|13363256|dbj|BAB37207.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
Sakai]
gi|24053306|gb|AAN44382.1| D-3-phosphoglycerate dehydrogenase [Shigella flexneri 2a str. 301]
gi|30042480|gb|AAP18204.1| D-3-phosphoglycerate dehydrogenase [Shigella flexneri 2a str.
2457T]
gi|73856947|gb|AAZ89654.1| D-3-phosphoglycerate dehydrogenase [Shigella sonnei Ss046]
gi|81246877|gb|ABB67585.1| D-3-phosphoglycerate dehydrogenase [Shigella boydii Sb227]
gi|85675724|dbj|BAE76977.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli str. K12
substr. W3110]
gi|91073866|gb|ABE08747.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli UTI89]
gi|110616362|gb|ABF05029.1| D-3-phosphoglycerate dehydrogenase [Shigella flexneri 5 str. 8401]
gi|115514266|gb|ABJ02341.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli APEC O1]
gi|157068052|gb|ABV07307.1| phosphoglycerate dehydrogenase [Escherichia coli HS]
gi|157078524|gb|ABV18232.1| phosphoglycerate dehydrogenase [Escherichia coli E24377A]
gi|169753770|gb|ACA76469.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Escherichia coli ATCC 8739]
gi|169890307|gb|ACB04014.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli str. K-12
substr. DH10B]
gi|170521291|gb|ACB19469.1| phosphoglycerate dehydrogenase [Escherichia coli SMS-3-5]
gi|187770872|gb|EDU34716.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4196]
gi|188017939|gb|EDU56061.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4113]
gi|188487773|gb|EDU62876.1| phosphoglycerate dehydrogenase [Escherichia coli 53638]
gi|189000621|gb|EDU69607.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4076]
gi|189358531|gb|EDU76950.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4401]
gi|189363684|gb|EDU82103.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4486]
gi|189369216|gb|EDU87632.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4501]
gi|189373809|gb|EDU92225.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC869]
gi|189379849|gb|EDU98265.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC508]
gi|190901761|gb|EDV61515.1| phosphoglycerate dehydrogenase [Escherichia coli B7A]
gi|192930789|gb|EDV83394.1| phosphoglycerate dehydrogenase [Escherichia coli E22]
gi|192959230|gb|EDV89665.1| phosphoglycerate dehydrogenase [Escherichia coli E110019]
gi|194415552|gb|EDX31819.1| phosphoglycerate dehydrogenase [Escherichia coli B171]
gi|194420143|gb|EDX36221.1| phosphoglycerate dehydrogenase [Shigella dysenteriae 1012]
gi|208726279|gb|EDZ75880.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4206]
gi|208733110|gb|EDZ81797.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4045]
gi|208739477|gb|EDZ87159.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4042]
gi|209159929|gb|ACI37362.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC4115]
gi|209760408|gb|ACI78516.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli]
gi|209760410|gb|ACI78517.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli]
gi|209760412|gb|ACI78518.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli]
gi|209760414|gb|ACI78519.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli]
gi|209760416|gb|ACI78520.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli]
gi|209913625|dbj|BAG78699.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli SE11]
gi|217319301|gb|EEC27726.1| phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
TW14588]
gi|218362229|emb|CAQ99847.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli IAI1]
gi|218366673|emb|CAR04427.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli S88]
gi|218371606|emb|CAR19445.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli IAI39]
gi|218428600|emb|CAR09527.2| D-3-phosphoglycerate dehydrogenase [Escherichia coli ED1a]
gi|218433514|emb|CAR14417.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli UMN026]
gi|226899480|gb|EEH85739.1| D-3-phosphoglycerate dehydrogenase [Escherichia sp. 3_2_53FAA]
gi|227834731|gb|EEJ45197.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli 83972]
gi|238860718|gb|ACR62716.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli BW2952]
gi|242378443|emb|CAQ33224.1| D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase
[Escherichia coli BL21(DE3)]
gi|253323291|gb|ACT27893.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253974725|gb|ACT40396.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli B str. REL606]
gi|253978891|gb|ACT44561.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli BL21(DE3)]
gi|254594262|gb|ACT73623.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
TW14359]
gi|257755684|dbj|BAI27186.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O26:H11 str.
11368]
gi|257760728|dbj|BAI32225.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O103:H2 str.
12009]
gi|257765945|dbj|BAI37440.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O111:H- str.
11128]
gi|260448042|gb|ACX38464.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Escherichia coli DH1]
gi|281179916|dbj|BAI56246.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli SE15]
gi|281602245|gb|ADA75229.1| D-3-phosphoglycerate dehydrogenase [Shigella flexneri 2002017]
gi|284922859|emb|CBG35948.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli 042]
gi|290764104|gb|ADD58065.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O55:H7 str.
CB9615]
gi|291322325|gb|EFE61754.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli B088]
gi|291426417|gb|EFE99449.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli FVEC1412]
gi|291432355|gb|EFF05337.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli B185]
gi|291469042|gb|EFF11533.1| conserved hypothetical protein [Escherichia coli B354]
gi|294490637|gb|ADE89393.1| phosphoglycerate dehydrogenase [Escherichia coli IHE3034]
gi|298277287|gb|EFI18803.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli FVEC1302]
gi|299879120|gb|EFI87331.1| phosphoglycerate dehydrogenase [Escherichia coli MS 196-1]
gi|300318828|gb|EFJ68612.1| phosphoglycerate dehydrogenase [Escherichia coli MS 175-1]
gi|300359925|gb|EFJ75795.1| phosphoglycerate dehydrogenase [Escherichia coli MS 198-1]
gi|300395072|gb|EFJ78610.1| phosphoglycerate dehydrogenase [Escherichia coli MS 69-1]
gi|300401710|gb|EFJ85248.1| phosphoglycerate dehydrogenase [Escherichia coli MS 84-1]
gi|300409301|gb|EFJ92839.1| phosphoglycerate dehydrogenase [Escherichia coli MS 45-1]
gi|300411788|gb|EFJ95098.1| phosphoglycerate dehydrogenase [Escherichia coli MS 115-1]
gi|300452753|gb|EFK16373.1| phosphoglycerate dehydrogenase [Escherichia coli MS 116-1]
gi|300458812|gb|EFK22305.1| phosphoglycerate dehydrogenase [Escherichia coli MS 21-1]
gi|300463841|gb|EFK27334.1| phosphoglycerate dehydrogenase [Escherichia coli MS 187-1]
gi|300526981|gb|EFK48050.1| phosphoglycerate dehydrogenase [Escherichia coli MS 119-7]
gi|300531564|gb|EFK52626.1| phosphoglycerate dehydrogenase [Escherichia coli MS 107-1]
gi|300841736|gb|EFK69496.1| phosphoglycerate dehydrogenase [Escherichia coli MS 124-1]
gi|301077937|gb|EFK92743.1| phosphoglycerate dehydrogenase [Escherichia coli MS 146-1]
gi|305854224|gb|EFM54662.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli NC101]
gi|306909364|gb|EFN39859.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Escherichia coli W]
gi|307554891|gb|ADN47666.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli ABU 83972]
gi|307625516|gb|ADN69820.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli UM146]
gi|308122393|gb|EFO59655.1| phosphoglycerate dehydrogenase [Escherichia coli MS 145-7]
gi|309703272|emb|CBJ02607.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli ETEC H10407]
gi|310332788|gb|EFQ00002.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli 1827-70]
gi|313647953|gb|EFS12399.1| D-3-phosphoglycerate dehydrogenase [Shigella flexneri 2a str.
2457T]
gi|315062216|gb|ADT76543.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli W]
gi|315137511|dbj|BAJ44670.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli DH1]
gi|315256797|gb|EFU36765.1| phosphoglycerate dehydrogenase [Escherichia coli MS 85-1]
gi|315289477|gb|EFU48872.1| phosphoglycerate dehydrogenase [Escherichia coli MS 110-3]
gi|315293907|gb|EFU53259.1| phosphoglycerate dehydrogenase [Escherichia coli MS 153-1]
gi|315295701|gb|EFU55021.1| phosphoglycerate dehydrogenase [Escherichia coli MS 16-3]
gi|315614930|gb|EFU95568.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli 3431]
gi|320184542|gb|EFW59343.1| D-3-phosphoglycerate dehydrogenase [Shigella flexneri CDC 796-83]
gi|320189256|gb|EFW63915.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
EC1212]
gi|320195031|gb|EFW69660.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli WV_060327]
gi|320202574|gb|EFW77144.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli EC4100B]
gi|320640555|gb|EFX10094.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
G5101]
gi|320645802|gb|EFX14787.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O157:H- str.
493-89]
gi|320651102|gb|EFX19542.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O157:H- str. H
2687]
gi|320656598|gb|EFX24494.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320662117|gb|EFX29518.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O55:H7 str.
USDA 5905]
gi|320667192|gb|EFX34155.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
LSU-61]
gi|323154606|gb|EFZ40805.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli EPECa14]
gi|323162494|gb|EFZ48344.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli E128010]
gi|323168044|gb|EFZ53733.1| D-3-phosphoglycerate dehydrogenase [Shigella sonnei 53G]
gi|323173911|gb|EFZ59540.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli LT-68]
gi|323180359|gb|EFZ65911.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli 1180]
gi|323183468|gb|EFZ68865.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli 1357]
gi|323377200|gb|ADX49468.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Escherichia coli KO11]
gi|323936081|gb|EGB32376.1| D-isomer specific 2-hydroxyacid dehydrogenase [Escherichia coli
E1520]
gi|323941997|gb|EGB38176.1| D-isomer specific 2-hydroxyacid dehydrogenase [Escherichia coli
E482]
gi|323946602|gb|EGB42625.1| D-isomer specific 2-hydroxyacid dehydrogenase [Escherichia coli
H120]
gi|323951650|gb|EGB47525.1| D-isomer specific 2-hydroxyacid dehydrogenase [Escherichia coli
H252]
gi|323957367|gb|EGB53089.1| D-isomer specific 2-hydroxyacid dehydrogenase [Escherichia coli
H263]
gi|323960791|gb|EGB56412.1| D-isomer specific 2-hydroxyacid dehydrogenase [Escherichia coli
H489]
gi|323971738|gb|EGB66966.1| D-isomer specific 2-hydroxyacid dehydrogenase [Escherichia coli
TA007]
gi|323978795|gb|EGB73876.1| D-isomer specific 2-hydroxyacid dehydrogenase [Escherichia coli
TW10509]
gi|324005565|gb|EGB74784.1| phosphoglycerate dehydrogenase [Escherichia coli MS 57-2]
gi|324017232|gb|EGB86451.1| phosphoglycerate dehydrogenase [Escherichia coli MS 117-3]
gi|324119705|gb|EGC13585.1| D-isomer specific 2-hydroxyacid dehydrogenase [Escherichia coli
E1167]
gi|326339003|gb|EGD62818.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
1044]
gi|326343114|gb|EGD66882.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli O157:H7 str.
1125]
gi|330908944|gb|EGH37458.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli AA86]
gi|331037075|gb|EGI09299.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli H736]
gi|331042406|gb|EGI14548.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli M605]
gi|331047794|gb|EGI19871.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli M718]
gi|331053623|gb|EGI25652.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli TA206]
gi|331058417|gb|EGI30398.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli TA143]
gi|331063316|gb|EGI35229.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli TA271]
gi|331068491|gb|EGI39886.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli TA280]
gi|331073730|gb|EGI45051.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli H591]
gi|331078153|gb|EGI49359.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli H299]
gi|332086838|gb|EGI91974.1| D-3-phosphoglycerate dehydrogenase [Shigella boydii 5216-82]
gi|332087673|gb|EGI92800.1| D-3-phosphoglycerate dehydrogenase [Shigella dysenteriae 155-74]
gi|332090963|gb|EGI96054.1| D-3-phosphoglycerate dehydrogenase [Shigella boydii 3594-74]
gi|332102751|gb|EGJ06097.1| D-3-phosphoglycerate dehydrogenase [Shigella sp. D9]
Length = 410
Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 384 EADEDVAEKALQAMKAIPGTIRARLL 409
>gi|157879670|pdb|1PSD|A Chain A, The Allosteric Ligand Site In The Vmax-Type Cooperative
Enzyme Phosphoglycerate Dehydrogenase
gi|157879671|pdb|1PSD|B Chain B, The Allosteric Ligand Site In The Vmax-Type Cooperative
Enzyme Phosphoglycerate Dehydrogenase
Length = 406
Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 319 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 377
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 378 EADEDVAEKALQAMKAIPGTIRARLL 403
>gi|300870001|ref|YP_003784872.1| D-3-phosphoglycerate dehydrogenase [Brachyspira pilosicoli 95/1000]
gi|300687700|gb|ADK30371.1| D-3-phosphoglycerate dehydrogenase [Brachyspira pilosicoli 95/1000]
Length = 534
Score = 80.5 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ R +K+ + + + ++ + + + ++ V L GINI ++ +
Sbjct: 433 AKNIARIVKLNDYDVIIKPQPHILIVPHINQPAMIAKVATTLSSDGINIGSMNVSENIKG 492
Query: 63 -EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+I + +D I + +++K+S + K +
Sbjct: 493 SNMSIMAINVDRIIESDMIDKISQIDGVHQPKYIKL 528
>gi|118617543|ref|YP_905875.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium ulcerans Agy99]
gi|118569653|gb|ABL04404.1| D-3-phosphoglycerate dehydrogenase SerA1 [Mycobacterium ulcerans
Agy99]
Length = 528
Score = 80.5 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 35/90 (38%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I +FD+ + + D G + +G +LG G+NI L A
Sbjct: 438 KIVQINGRHFDLRAEGTNLIVNYVDQPGALGKIGTLLGAAGVNIHAAQLSEDVEGPGATV 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D + V ++ V ++ +
Sbjct: 498 LLRLDQDVPEDVRSAIAAAVGANRLEVVDL 527
>gi|82778323|ref|YP_404672.1| D-3-phosphoglycerate dehydrogenase [Shigella dysenteriae Sd197]
gi|309785277|ref|ZP_07679908.1| D-3-phosphoglycerate dehydrogenase [Shigella dysenteriae 1617]
gi|81242471|gb|ABB63181.1| D-3-phosphoglycerate dehydrogenase [Shigella dysenteriae Sd197]
gi|308926397|gb|EFP71873.1| D-3-phosphoglycerate dehydrogenase [Shigella dysenteriae 1617]
Length = 410
Score = 80.5 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 384 EADEDVAEKALQAMKAIPGTIRARLL 409
>gi|194436762|ref|ZP_03068862.1| phosphoglycerate dehydrogenase [Escherichia coli 101-1]
gi|254037959|ref|ZP_04872017.1| phosphoglycerate dehydrogenase [Escherichia sp. 1_1_43]
gi|194424244|gb|EDX40231.1| phosphoglycerate dehydrogenase [Escherichia coli 101-1]
gi|226839583|gb|EEH71604.1| phosphoglycerate dehydrogenase [Escherichia sp. 1_1_43]
Length = 410
Score = 80.5 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 384 EADEDVAEKALQAMKAIPGTIRARLL 409
>gi|218550161|ref|YP_002383952.1| D-3-phosphoglycerate dehydrogenase [Escherichia fergusonii ATCC
35469]
gi|218357702|emb|CAQ90344.1| D-3-phosphoglycerate dehydrogenase [Escherichia fergusonii ATCC
35469]
gi|324115069|gb|EGC09034.1| D-isomer specific 2-hydroxyacid dehydrogenase [Escherichia
fergusonii B253]
gi|325498473|gb|EGC96332.1| D-3-phosphoglycerate dehydrogenase [Escherichia fergusonii ECD227]
Length = 410
Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 384 EADEDVAEKALQAMKAIPGTIRARLL 409
>gi|183981728|ref|YP_001850019.1| D-3-phosphoglycerate dehydrogenase SerA1 [Mycobacterium marinum M]
gi|183175054|gb|ACC40164.1| D-3-phosphoglycerate dehydrogenase SerA1 [Mycobacterium marinum M]
Length = 528
Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 35/90 (38%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I +FD+ + + D G + +G +LG G+NI L A
Sbjct: 438 KIVQINGRHFDLRAEGTNLIVNYVDQPGALGKIGTLLGAAGVNIHAAQLSEDVEGPGATV 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D + V ++ V ++ +
Sbjct: 498 LLRLDQDVPEDVRSAIAAAVGANRLEVVDL 527
>gi|146280793|ref|YP_001170946.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas stutzeri A1501]
gi|145568998|gb|ABP78104.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas stutzeri A1501]
Length = 468
Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + + GINI L ++ + +
Sbjct: 384 VNFPEVALPSHPGKHRLLHIHQNIPGVMSEINKVFADNGINICGQFLQTNEKVGYV--VI 441
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + LEKL +
Sbjct: 442 DVDKEYSDLALEKLQHVNGTIRSRVL 467
>gi|213964733|ref|ZP_03392933.1| phosphoglycerate dehydrogenase [Corynebacterium amycolatum SK46]
gi|213952926|gb|EEB64308.1| phosphoglycerate dehydrogenase [Corynebacterium amycolatum SK46]
Length = 531
Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I D+ + ++ D+ G + V LGE GINI L ++ + AI
Sbjct: 441 KIVRINGRGIDMRAQGRNLFLLYKDVPGALGRVATTLGESGINIEAAALSPQEADQTAIL 500
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
L + + ++EK+ I + +D
Sbjct: 501 VLRVSKEVPEELVEKI--TEEISATHALQLELD 531
>gi|145224813|ref|YP_001135491.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium gilvum PYR-GCK]
gi|315445143|ref|YP_004078022.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium sp. Spyr1]
gi|145217299|gb|ABP46703.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium gilvum PYR-GCK]
gi|315263446|gb|ADU00188.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium sp. Spyr1]
Length = 528
Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I N D+ + + I D G + +G +LG +NI L + E A
Sbjct: 438 KIVQINGRNLDLRAEGVNVIINYHDQPGALGKIGTLLGGANVNILAAQLSQDADGEGATI 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
L +D + VL + R V V
Sbjct: 498 MLRVDREVPADVLAGIG-----RDVNALTLEV 524
>gi|169619920|ref|XP_001803372.1| hypothetical protein SNOG_13160 [Phaeosphaeria nodorum SN15]
gi|111058367|gb|EAT79487.1| hypothetical protein SNOG_13160 [Phaeosphaeria nodorum SN15]
Length = 571
Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS- 61
S KP ++ + ++ N D G + FVGN+LG+ G+NI ++ +
Sbjct: 471 SGNKPFISRLDRFKGEFVPKGTLLICRNFDSCGKIGFVGNLLGKAGVNIKFMNVAPLEEE 530
Query: 62 -----TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D ++ V + L + F
Sbjct: 531 VEGEGKNEALMILGVDRAVGEDVKKALIGPEGVLEASVVNF 571
>gi|330505478|ref|YP_004382347.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas mendocina NK-01]
gi|328919764|gb|AEB60595.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas mendocina NK-01]
Length = 409
Score = 80.5 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ ++ G++ + + + GINI+ L + + +
Sbjct: 325 VNFPEVALPAHAGKHRLLHIHENVPGVMSEINKVFADNGINISGQFLQTNDKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + LEKL +
Sbjct: 383 DVDAEYSDLALEKLQQVHGTIRSRVL 408
>gi|225619505|ref|YP_002720762.1| D-3-phosphoglycerate dehydrogenase [Brachyspira hyodysenteriae WA1]
gi|225214324|gb|ACN83058.1| D-3-phosphoglycerate dehydrogenase [Brachyspira hyodysenteriae WA1]
Length = 534
Score = 80.5 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ R +K + + + ++ + + + ++ V +L GINI + +
Sbjct: 433 AKNIARIVKFNDYDVIIKPQPHILIVPHINQPAMIAKVATVLSGDGINIGSMSVSENIKG 492
Query: 63 -EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+I + +D I N V+ K+S ++ K
Sbjct: 493 SSTSIMAINVDRVIGNDVITKISNIEGVQDPKYVRL 528
>gi|225571915|ref|ZP_03780785.1| hypothetical protein CLOHYLEM_07889 [Clostridium hylemonae DSM
15053]
gi|225159428|gb|EEG72047.1| hypothetical protein CLOHYLEM_07889 [Clostridium hylemonae DSM
15053]
Length = 94
Score = 80.5 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 32/88 (36%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
K+ I+ + + N D G + V L E I+IA + R + A+ +
Sbjct: 1 KLDGIDVSFSGESNTLIVRNIDQPGCITEVAASLSEEDIDIATMQVFRDKKGGCAVMVVE 60
Query: 71 IDGSILNSVLEKLSVNVTIRFVKQFEFN 98
D + L++L I V N
Sbjct: 61 TDQVVSRDALDRLEGKEGIVNVTFLNVN 88
>gi|310826350|ref|YP_003958707.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding-protein
[Eubacterium limosum KIST612]
gi|308738084|gb|ADO35744.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding-protein
[Eubacterium limosum KIST612]
Length = 389
Score = 80.5 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + V I + + +I ++ + +L + INI+
Sbjct: 298 NGNIVNSVNYPNCSMGVCNSVHRITVNHRNIPNMIGQITAVLAGHNINISDMT--NKNRG 355
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E A + + +D + ++V E L + V+ +
Sbjct: 356 EWAYTMIDVDSEVGDNVKEALKTIEGVTRVRVLK 389
>gi|330806932|ref|YP_004351394.1| Phosphoglycerate dehydrogenase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375040|gb|AEA66390.1| Phosphoglycerate dehydrogenase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 409
Score = 80.1 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHENIPGVMSEINKVFAENGINISGQFLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + EKL +
Sbjct: 383 DVDAEYSDLAQEKLQHINGTIRCRVL 408
>gi|86146378|ref|ZP_01064702.1| Phosphoglycerate dehydrogenase [Vibrio sp. MED222]
gi|85835857|gb|EAQ53991.1| Phosphoglycerate dehydrogenase [Vibrio sp. MED222]
Length = 235
Score = 80.1 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + G + ++ + GI+ + I E GINIA +L + + +
Sbjct: 151 VNFPEVSLPLHTGTSRLLHIHENRPGILTQINTIFAEEGINIAGQYLQTAADMGYV--VI 208
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + L KL +
Sbjct: 209 DVEANRSEEALLKLKEIEGTIRARLLH 235
>gi|311742093|ref|ZP_07715903.1| D-3-phosphoglycerate dehydrogenase [Aeromicrobium marinum DSM
15272]
gi|311314586|gb|EFQ84493.1| D-3-phosphoglycerate dehydrogenase [Aeromicrobium marinum DSM
15272]
Length = 418
Score = 80.1 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + E+N VD + + V+ + G++ V +LGE G+NI L E
Sbjct: 328 GSTAMSVNLPELNLPVDPEKHRLAHVHRNAPGVLASVNTLLGERGVNIEGQQLAT--RGE 385
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ + SVL +L+ ++Q
Sbjct: 386 LGYVVTDVGAEVQPSVLAELAELPETVRLRQLS 418
>gi|296112486|ref|YP_003626424.1| D-3-phosphoglycerate dehydrogenase [Moraxella catarrhalis RH4]
gi|295920180|gb|ADG60531.1| D-3-phosphoglycerate dehydrogenase [Moraxella catarrhalis RH4]
gi|326561526|gb|EGE11869.1| D-3-phosphoglycerate dehydrogenase [Moraxella catarrhalis 7169]
gi|326566157|gb|EGE16312.1| D-3-phosphoglycerate dehydrogenase [Moraxella catarrhalis 12P80B1]
gi|326567996|gb|EGE18088.1| D-3-phosphoglycerate dehydrogenase [Moraxella catarrhalis BC7]
gi|326570702|gb|EGE20736.1| D-3-phosphoglycerate dehydrogenase [Moraxella catarrhalis BC1]
gi|326571257|gb|EGE21280.1| D-3-phosphoglycerate dehydrogenase [Moraxella catarrhalis BC8]
gi|326573061|gb|EGE23034.1| D-3-phosphoglycerate dehydrogenase [Moraxella catarrhalis CO72]
gi|326577820|gb|EGE27688.1| D-3-phosphoglycerate dehydrogenase [Moraxella catarrhalis O35E]
Length = 408
Score = 80.1 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ G + ++ ++ G++ + + GINI L + +
Sbjct: 324 VNFPNVSIPFTDGTHRLLHIHRNVPGVLSQINASFADAGINIIAQSLMT--KGDVGYLVM 381
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + + L++L V+
Sbjct: 382 DVDDNDSDRALKRLRAVPETIRVRVL 407
>gi|326564347|gb|EGE14576.1| D-3-phosphoglycerate dehydrogenase [Moraxella catarrhalis 46P47B1]
Length = 408
Score = 80.1 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ G + ++ ++ G++ + + GINI L + +
Sbjct: 324 VNFPNVSIPFTDGTHRLLHIHRNVPGVLSQINASFADAGINIIAQSLMT--KGDVGYLVM 381
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + + L++L V+
Sbjct: 382 DVDDNDSDRALKRLRAVPETIRVRVL 407
>gi|166030919|ref|ZP_02233748.1| hypothetical protein DORFOR_00600 [Dorea formicigenerans ATCC
27755]
gi|166029186|gb|EDR47943.1| hypothetical protein DORFOR_00600 [Dorea formicigenerans ATCC
27755]
Length = 387
Score = 80.1 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + V I +++ ++ ++ IL + +NIA
Sbjct: 296 NGNIQHSVNYPDCDMGVKGENTRITLLHHNVPNMIGQFTKILADDNMNIADMT--NKSKG 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E+A + + ID + +SV+E L+ + V+
Sbjct: 354 EYAYTMIDIDSDVTDSVIEDLTKVKDVLRVRVIR 387
>gi|148652381|ref|YP_001279474.1| D-3-phosphoglycerate dehydrogenase [Psychrobacter sp. PRwf-1]
gi|148571465|gb|ABQ93524.1| D-3-phosphoglycerate dehydrogenase [Psychrobacter sp. PRwf-1]
Length = 408
Score = 80.1 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ V G + ++ ++ G++ + + GINI L + +
Sbjct: 324 VNFPEVSIPVKEGSHRLLHIHKNVPGVLSQINSSFASAGINILAQSLMT--EGDVGYLVM 381
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D L+KL V+
Sbjct: 382 DVDNRNSQEALDKLRDIEETIRVRVL 407
>gi|28872406|ref|NP_795025.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213971995|ref|ZP_03400092.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv. tomato
T1]
gi|301384886|ref|ZP_07233304.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv. tomato
Max13]
gi|302063032|ref|ZP_07254573.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv. tomato
K40]
gi|302133847|ref|ZP_07259837.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|28855661|gb|AAO58720.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213923257|gb|EEB56855.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv. tomato
T1]
gi|330874161|gb|EGH08310.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330967066|gb|EGH67326.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|331017037|gb|EGH97093.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 409
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHENIPGVLSEINKVFAENGINISGQFLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + KL +
Sbjct: 383 DVDAEYSDLAQAKLQHIKGTIRSRVL 408
>gi|83644490|ref|YP_432925.1| D-3-phosphoglycerate dehydrogenase [Hahella chejuensis KCTC 2396]
gi|83632533|gb|ABC28500.1| Phosphoglycerate dehydrogenase and related dehydrogenase [Hahella
chejuensis KCTC 2396]
Length = 436
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ ++ G++ + ++ + GINI +L + + +
Sbjct: 352 VNFPEVSLPSHPQNHRLLHIHENVPGVLSEINSVFSDNGINICGQYLQTNDKVGYV--VV 409
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ + L+KL +
Sbjct: 410 DVNKDYSDLALQKLKSVKGTIRCRVL 435
>gi|326566146|gb|EGE16302.1| D-3-phosphoglycerate dehydrogenase [Moraxella catarrhalis 103P14B1]
gi|326577241|gb|EGE27134.1| D-3-phosphoglycerate dehydrogenase [Moraxella catarrhalis 101P30B1]
Length = 408
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ G + ++ ++ G++ + + GINI L + +
Sbjct: 324 VNFPNVSIPFTDGTHRLLHIHRNVPGVLSQINASFADAGINIIAQSLMT--KGDVGYLVM 381
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + + L++L V+
Sbjct: 382 DVDDNDSDRALKRLRAVPETIRVRVL 407
>gi|313608154|gb|EFR84205.1| probable L-serine dehydratase, beta chain [Listeria monocytogenes
FSL F2-208]
Length = 87
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 37/82 (45%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
++ E + I I++ D G + V +++ ++ INI + R + A+ +
Sbjct: 1 RLNEFELEFTGTAPAILILHQDKFGAIAAVSSVIADHKINIGQMKVSRKVKGDEALMVIE 60
Query: 71 IDGSILNSVLEKLSVNVTIRFV 92
+D + +++ K++ I V
Sbjct: 61 VDQHVEQALISKIAELPGIYQV 82
>gi|86211233|gb|ABC87292.1| putative phosphoglycerate dehydrogenase [Ceratopteris richardii]
Length = 262
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 40/91 (43%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
P K+ E + D + +I D G++ VGNILG+ IN+ +GR + A+
Sbjct: 172 PHLCKVGEFDVDASLEGSVILTRQQDQPGMIGIVGNILGDENINVNFMSVGRIAPRKEAL 231
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ +D + L+++ ++ +
Sbjct: 232 MAIGLDDEPTQAALKRIGSIPELQEYVYLKL 262
>gi|104784158|ref|YP_610656.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas entomophila L48]
gi|95113145|emb|CAK17873.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas entomophila L48]
Length = 409
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L + + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHENIPGVLSEINKVFAENGINISGQFLQTDEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + EKL +
Sbjct: 383 DVDAEYSDLAQEKLQHVKGTIRSRVL 408
>gi|84390084|ref|ZP_00991346.1| Phosphoglycerate dehydrogenase [Vibrio splendidus 12B01]
gi|84376738|gb|EAP93613.1| Phosphoglycerate dehydrogenase [Vibrio splendidus 12B01]
Length = 409
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + G + ++ + GI+ + I E GINIA +L + + +
Sbjct: 325 VNFPEVSLPLHTGASRLLHIHENRPGILTQINTIFAEEGINIAGQYLQTAADMGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + L KL +
Sbjct: 383 DVEANRSEEALLKLKEIEGTIRARLLH 409
>gi|218710589|ref|YP_002418210.1| D-3-phosphoglycerate dehydrogenase [Vibrio splendidus LGP32]
gi|218323608|emb|CAV19866.1| D-3-phosphoglycerate dehydrogenase [Vibrio splendidus LGP32]
Length = 409
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + G + ++ + GI+ + I E GINIA +L + + +
Sbjct: 325 VNFPEVSLPLHTGTSRLLHIHENRPGILTQINTIFAEEGINIAGQYLQTAADMGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + L KL +
Sbjct: 383 DVEANRSEEALLKLKEIEGTIRARLLH 409
>gi|163784160|ref|ZP_02179098.1| D-3-phosphoglycerate dehydrogenase [Hydrogenivirga sp. 128-5-R1-1]
gi|159880568|gb|EDP74134.1| D-3-phosphoglycerate dehydrogenase [Hydrogenivirga sp. 128-5-R1-1]
Length = 288
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F PR + I + D++ +++ N D+ G++ VG +L + INIA F LGR +
Sbjct: 193 FYGKIPRIMLIDKYWIDIEPEGVILVFENKDVPGVIAKVGEVLARHSINIAGFRLGRIEK 252
Query: 62 TEHAISFLCIDGSILN 77
+ A+ L +D +
Sbjct: 253 GKIALGALQLDDKLNK 268
>gi|170719497|ref|YP_001747185.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas putida W619]
gi|169757500|gb|ACA70816.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Pseudomonas putida W619]
Length = 409
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHENIPGVLSEINKVFAENGINISGQFLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + EKL +
Sbjct: 383 DVDAEYSDLAQEKLQHVKGTIRSRVL 408
>gi|330961905|gb|EGH62165.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 409
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHENIPGVLSEINKVFAENGINISGQFLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + KL +
Sbjct: 383 DVDAEYSDLAQAKLQHIKGTIRSRVL 408
>gi|269965767|ref|ZP_06179864.1| D-3-phosphoglycerate dehydrogenase [Vibrio alginolyticus 40B]
gi|269829635|gb|EEZ83872.1| D-3-phosphoglycerate dehydrogenase [Vibrio alginolyticus 40B]
Length = 410
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 3/88 (3%)
Query: 10 IKIQEINF-DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + GI+ + I E GINIA +L + +
Sbjct: 325 VNFPEVSLPEHSGECSRLLHIHKNRPGILTQINTIFAEEGINIAAQYLQTAAEIGYV--V 382
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ ++ L KL +
Sbjct: 383 IDVETERSEEALTKLKNIEGTIRARILH 410
>gi|326797229|ref|YP_004315049.1| phosphoglycerate dehydrogenase [Marinomonas mediterranea MMB-1]
gi|326547993|gb|ADZ93213.1| Phosphoglycerate dehydrogenase [Marinomonas mediterranea MMB-1]
Length = 409
Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ I ++ + G++ + ++ + INI+ +L ++S +
Sbjct: 325 VNFPEVALPAQADMHRILHIHENRPGVLSKINSVFSDNNINISGQYLRTTESLG--YMVM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + LEK+ +
Sbjct: 383 DVDAEMGELALEKVKEVDGTIRARVL 408
>gi|322710973|gb|EFZ02547.1| d-3-phosphoglycerate dehydrogenase [Metarhizium anisopliae ARSEF
23]
Length = 572
Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 13/108 (12%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR---- 58
SD + K+ N +I + N D G + VG +LG +GINI + +
Sbjct: 465 SDKRVYISKLDCFNATFSPEGTLIILHNYDEPGKIGGVGMVLGSHGINIRYMQVASLDAE 524
Query: 59 ---------SQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+Q A+ L +DG + V+E L + + V +
Sbjct: 525 ARQGHNTPPTQKDNEALMILGVDGEVDAKVMEGLRKSEGVLDVSLIQL 572
>gi|227548065|ref|ZP_03978114.1| phosphoglycerate dehydrogenase [Corynebacterium lipophiloflavum DSM
44291]
gi|227079863|gb|EEI17826.1| phosphoglycerate dehydrogenase [Corynebacterium lipophiloflavum DSM
44291]
Length = 554
Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I D+ + + D G + VG+ LGE GINI L ++ + A+
Sbjct: 465 KIVNINGRGVDMRAEGRNLFLRYTDAPGALGKVGSTLGEAGINIEAAALTQAAKGDGAVL 524
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
L ++ + + ++ + + ++
Sbjct: 525 ILRVEREVPEELEAAIASS---IDASSIQIDL 553
>gi|301629882|ref|XP_002944061.1| PREDICTED: d-3-phosphoglycerate dehydrogenase-like [Xenopus
(Silurana) tropicalis]
Length = 410
Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + E+ G+ I V+ + G++ + +NIA +L
Sbjct: 319 NGTTITSVNFPEVALPAHPGKHRILHVHHNQPGVLSAINQTFAALHVNIAGQYLQTDDKL 378
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +D LEKL +
Sbjct: 379 GYV--VIDLDAQSSELALEKLWQVEGTIRCRVL 409
>gi|157692265|ref|YP_001486727.1| L-serine ammonia-lyase beta chain [Bacillus pumilus SAFR-032]
gi|157681023|gb|ABV62167.1| L-serine ammonia-lyase beta chain [Bacillus pumilus SAFR-032]
Length = 220
Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 38/86 (44%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
++ + I +V+ D G + V N+L ++ INI H + R + A+ +
Sbjct: 133 TELNGFELRLSGNHPAILVVHNDRYGTIAAVANVLAKFAINIGHMEVARKDVGQEALMTI 192
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D +I +VL +L I V Q
Sbjct: 193 EVDQNIDPAVLLELETLPNIIQVTQI 218
>gi|258651703|ref|YP_003200859.1| D-3-phosphoglycerate dehydrogenase [Nakamurella multipartita DSM
44233]
gi|258554928|gb|ACV77870.1| D-3-phosphoglycerate dehydrogenase [Nakamurella multipartita DSM
44233]
Length = 530
Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 39/89 (43%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
+ I+I +FD+ ++ D G++ +G +LGE G NI L + AI
Sbjct: 439 AKLIEINGRHFDLRAEGNLLVFAYGDRPGVMGTIGALLGEQGTNIEAAQLSQELDGHAAI 498
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
L +D ++L+++ + V+
Sbjct: 499 MVLRVDRLPDQALLDRIGAAIEAIQVRGI 527
>gi|297518490|ref|ZP_06936876.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli OP50]
Length = 122
Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 37 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 95
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 96 EADEDVAEKALQAMKAIPGTIRARLL 121
>gi|161506391|ref|YP_001573503.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160867738|gb|ABX24361.1| hypothetical protein SARI_04588 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 427
Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I + G+NIA +L S + + +
Sbjct: 342 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNQIFADQGVNIAAQYLQTSARMGYVVIDI 400
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L + +
Sbjct: 401 EADSDVAEKALLAMKAIPGTIRARLL 426
>gi|326474476|gb|EGD98485.1| D-3-phosphoglycerate dehydrogenase [Trichophyton tonsurans CBS
112818]
Length = 570
Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 10/105 (9%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S+ +P +I ++ N D G + VG+ILG+ G+NI +
Sbjct: 466 SESQPLISRIDRFAASFVPEGTLLICHNFDSPGKIGVVGSILGKRGVNINFMSVAPISKG 525
Query: 63 ----------EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D ++ V+ L +
Sbjct: 526 KKQQKEIHSSDEALMILGVDRAVDECVVRALVNEGGVLSASVVSL 570
>gi|146312971|ref|YP_001178045.1| D-3-phosphoglycerate dehydrogenase [Enterobacter sp. 638]
gi|145319847|gb|ABP61994.1| D-3-phosphoglycerate dehydrogenase [Enterobacter sp. 638]
Length = 410
Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L + + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLLHIHENRPGVLTAINQIFAEQGVNIAAQYLQTNAQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L + +
Sbjct: 384 EADDDVAEKALLSMKAIPGTIRARLL 409
>gi|194707240|gb|ACF87704.1| unknown [Zea mays]
Length = 589
Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 39/89 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V G + ++ DV + +I D GI+ VG+ILG+ +N++ + R+
Sbjct: 493 VRDGGASHLTLVGSLSVDVSLEGNLILCGQLDHPGIIGRVGSILGKMNVNVSFMSVSRTA 552
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTI 89
+ AI + +D L+ + ++
Sbjct: 553 PGKQAIMAIGVDEEPGKEALKLIGDTPSV 581
>gi|16766363|ref|NP_461978.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|56415008|ref|YP_152083.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|161616015|ref|YP_001589980.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167553250|ref|ZP_02347000.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167990423|ref|ZP_02571523.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168236126|ref|ZP_02661184.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168242854|ref|ZP_02667786.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168264505|ref|ZP_02686478.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168463763|ref|ZP_02697680.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194446775|ref|YP_002042315.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194451247|ref|YP_002047048.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194734978|ref|YP_002116011.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197249451|ref|YP_002147977.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197264705|ref|ZP_03164779.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197363937|ref|YP_002143574.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|200388423|ref|ZP_03215035.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204928115|ref|ZP_03219315.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|207858325|ref|YP_002244976.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|238909862|ref|ZP_04653699.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|16421614|gb|AAL21937.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|56129265|gb|AAV78771.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|161365379|gb|ABX69147.1| hypothetical protein SPAB_03816 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194405438|gb|ACF65660.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194409551|gb|ACF69770.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194710480|gb|ACF89701.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195633189|gb|EDX51603.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197095414|emb|CAR60973.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197213154|gb|ACH50551.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197242960|gb|EDY25580.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197290763|gb|EDY30117.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|199605521|gb|EDZ04066.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204322437|gb|EDZ07634.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205322277|gb|EDZ10116.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205331102|gb|EDZ17866.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205338092|gb|EDZ24856.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205347061|gb|EDZ33692.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206710128|emb|CAR34483.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|261248194|emb|CBG26030.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267995221|gb|ACY90106.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159618|emb|CBW19137.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312914084|dbj|BAJ38058.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320087494|emb|CBY97259.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|322613461|gb|EFY10402.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322621053|gb|EFY17911.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624117|gb|EFY20951.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322628144|gb|EFY24933.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633263|gb|EFY30005.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636159|gb|EFY32867.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322639497|gb|EFY36185.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647570|gb|EFY44059.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648754|gb|EFY45201.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653809|gb|EFY50135.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657915|gb|EFY54183.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664018|gb|EFY60217.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322668971|gb|EFY65122.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322673035|gb|EFY69142.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322677974|gb|EFY74037.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681150|gb|EFY77183.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687920|gb|EFY83887.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323131418|gb|ADX18848.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323194884|gb|EFZ80071.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323196635|gb|EFZ81783.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202665|gb|EFZ87705.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323207848|gb|EFZ92794.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323212600|gb|EFZ97417.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323214917|gb|EFZ99665.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222647|gb|EGA07012.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323225073|gb|EGA09325.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230595|gb|EGA14713.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323235054|gb|EGA19140.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239093|gb|EGA23143.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244549|gb|EGA28555.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323247164|gb|EGA31130.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253353|gb|EGA37182.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323256340|gb|EGA40076.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262484|gb|EGA46040.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323267420|gb|EGA50904.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269176|gb|EGA52631.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 410
Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNQIFAEQGVNIAAQYLQTSARMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
DG + L + +
Sbjct: 384 EADGDVAEKALLAMKAIPGTIRARLL 409
>gi|194472963|ref|ZP_03078947.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205358819|ref|ZP_03224148.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194459327|gb|EDX48166.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205331748|gb|EDZ18512.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 427
Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 342 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNQIFAEQGVNIAAQYLQTSARMGYVVIDI 400
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
DG + L + +
Sbjct: 401 EADGDVAEKALLAMKAIPGTIRARLL 426
>gi|146338824|ref|YP_001203872.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizobium sp. ORS278]
gi|146191630|emb|CAL75635.1| D-3-phosphoglycerate dehydrogenase (PGDH) [Bradyrhizobium sp.
ORS278]
Length = 415
Score = 79.7 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 28/86 (32%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ ++ G++ V + + INI +L + +
Sbjct: 324 VNFPQVQLPARPTGTRFIHVHRNVPGVLRQVNEAVSRHNINILAQYLQTDPEVGYVVLET 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ G +L +L V+
Sbjct: 384 DVVGGEGEELLSELRAVDGTIRVRVL 409
>gi|226502750|ref|NP_001148319.1| LOC100281928 [Zea mays]
gi|195616328|gb|ACG29994.1| D-3-phosphoglycerate dehydrogenase [Zea mays]
gi|195617508|gb|ACG30584.1| D-3-phosphoglycerate dehydrogenase [Zea mays]
Length = 590
Score = 79.3 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 39/89 (43%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V G + ++ DV + +I D GI+ VG+ILG+ +N++ + R+
Sbjct: 494 VRDGGASHLTLVGSLSVDVSLEGNLILCGQLDHPGIIGRVGSILGKMNVNVSFMSVSRTA 553
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTI 89
+ AI + +D L+ + ++
Sbjct: 554 PGKQAIMAIGVDEEPGKEALKLIGDTPSV 582
>gi|148253581|ref|YP_001238166.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizobium sp. BTAi1]
gi|146405754|gb|ABQ34260.1| D-3-phosphoglycerate dehydrogenase (PGDH) [Bradyrhizobium sp.
BTAi1]
Length = 415
Score = 79.3 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 28/86 (32%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ ++ G++ V + + INI +L + +
Sbjct: 324 VNFPQVQLPARPTGTRFIHVHRNVPGVLRQVNEAVSRHNINILAQYLQTDPEVGYVVLET 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ G +L +L V+
Sbjct: 384 DVVGGEGEELLSELRAVEGTIRVRVL 409
>gi|16761843|ref|NP_457460.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29143330|ref|NP_806672.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213162873|ref|ZP_03348583.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213417999|ref|ZP_03351079.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
gi|213584198|ref|ZP_03366024.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213646129|ref|ZP_03376182.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|289830214|ref|ZP_06547598.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|25283926|pir||AD0874 D-3-phosphoglycerate dehydrogenase [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16504145|emb|CAD02892.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29138964|gb|AAO70532.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 410
Score = 79.3 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNQIFAEQGVNIAAQYLQTSARMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
DG + L + +
Sbjct: 384 EADGDVAEKALLAMKAIPGTIRARLL 409
>gi|46135935|ref|XP_389659.1| hypothetical protein FG09483.1 [Gibberella zeae PH-1]
Length = 591
Score = 79.3 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 13/109 (11%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR---- 58
SD + K+ N +I + N D G + VG +LG++GINI +
Sbjct: 462 SDERVFISKLDRFNGVFTPEGTLIILHNYDEPGKIGGVGMVLGKHGINIKFMQVASLDPE 521
Query: 59 ---------SQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
+ A+ L + G + + VLE L+ + + V + E
Sbjct: 522 ATKGADTPPDPNGNEALMILGVLGPVSDEVLEGLNNSEGVLDVVEIEIE 570
>gi|326481542|gb|EGE05552.1| phosphoglycerate dehydrogenase [Trichophyton equinum CBS 127.97]
Length = 571
Score = 79.3 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 10/105 (9%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S+ +P +I ++ N D G + VG+ILG+ G+NI +
Sbjct: 467 SESQPLISRIDRFAASFVPEGTLLICHNFDSPGKIGVVGSILGKRGVNINFMSVAPISKG 526
Query: 63 ----------EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D ++ V+ L +
Sbjct: 527 KKQQKEIHSSDEALMILGVDRAVDECVVRALVNEGGVLSASVVSL 571
>gi|62181573|ref|YP_217990.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|62129206|gb|AAX66909.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322716054|gb|EFZ07625.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 410
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNQIFAEQGVNIAAQYLQTSARMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
DG + L + +
Sbjct: 384 EADGDVAEKALLAMKAIPGTIRARLL 409
>gi|224584853|ref|YP_002638651.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|224469380|gb|ACN47210.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
Length = 427
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 342 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNQIFAEQGVNIAAQYLQTSARMGYVVIDI 400
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
DG + L + +
Sbjct: 401 EADGDVAEKALLAMKAIPGTIRARLL 426
>gi|327479061|gb|AEA82371.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas stutzeri DSM 4166]
Length = 411
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + + GINI L ++ + +
Sbjct: 327 VNFPEVALPSHPGKHRLLHIHQNIPGVMSEINKVFADNGINICGQFLQTNEKVGYV--VI 384
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + LEKL +
Sbjct: 385 DVDKEYSDLALEKLQHVNGTIRSRVL 410
>gi|225022672|ref|ZP_03711864.1| hypothetical protein CORMATOL_02717 [Corynebacterium matruchotii
ATCC 33806]
gi|224944580|gb|EEG25789.1| hypothetical protein CORMATOL_02717 [Corynebacterium matruchotii
ATCC 33806]
Length = 558
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 36/78 (46%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I D+ + +D G + VG+ LG+ GINI L + E A+
Sbjct: 469 KIVRINGRGIDLRASGHNLFFNYSDAPGALGIVGSALGDAGINIVAAALTQESGGEFAVL 528
Query: 68 FLCIDGSILNSVLEKLSV 85
L ++ + + +LE ++
Sbjct: 529 ILRVEREVPDELLESIAE 546
>gi|169630385|ref|YP_001704034.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium abscessus ATCC
19977]
gi|169242352|emb|CAM63380.1| D-3-phosphoglycerate dehydrogenase (SerA) [Mycobacterium abscessus]
Length = 523
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I NFD+ + + I AD+ G + +G +LG +NI L + S A
Sbjct: 433 KIVQINGRNFDLRAEGVNLVINYADVPGALGKIGTVLGGAEVNIQAAQLSQDASGAAATI 492
Query: 68 FLCIDGSILNSVLEKLSV 85
L ID + ++VL+++
Sbjct: 493 ILRIDRTAPDAVLDEIRA 510
>gi|213427299|ref|ZP_03360049.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
Length = 410
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLYG-GRRLMHIHENRPGVLTALNQIFAEQGVNIAAQYLQTSARMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
DG + L + +
Sbjct: 384 EADGDVAEKALLAMKAIPGTIRARLL 409
>gi|15595513|ref|NP_249007.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas aeruginosa PAO1]
gi|107099298|ref|ZP_01363216.1| hypothetical protein PaerPA_01000310 [Pseudomonas aeruginosa PACS2]
gi|152988887|ref|YP_001345804.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas aeruginosa PA7]
gi|218889056|ref|YP_002437920.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas aeruginosa LESB58]
gi|254237450|ref|ZP_04930773.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas aeruginosa C3719]
gi|254243414|ref|ZP_04936736.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas aeruginosa 2192]
gi|9946162|gb|AAG03705.1|AE004469_10 D-3-phosphoglycerate dehydrogenase [Pseudomonas aeruginosa PAO1]
gi|126169381|gb|EAZ54892.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas aeruginosa C3719]
gi|126196792|gb|EAZ60855.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas aeruginosa 2192]
gi|150964045|gb|ABR86070.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas aeruginosa PA7]
gi|218769279|emb|CAW25039.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas aeruginosa LESB58]
Length = 409
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++A+I G++ + + + GIN++ +L ++ + +
Sbjct: 325 VNFPEVALPSHPGKHRLLHIHANIPGVMSEINKVFADNGINVSGQYLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + LEKL +
Sbjct: 383 DVDAEYSDLALEKLQQVNGTIRSRVL 408
>gi|262089724|gb|ACY24818.1| D-3-phosphoglycerate dehydrogenase [uncultured organism]
Length = 409
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 33/93 (35%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + E+ + V+A++ G++ + NI + INIA +L +
Sbjct: 318 NGTTISSVNFPEVALPGHPDAHRLLHVHANVPGVLSKINNIFSDRHINIASQYLQTNDKV 377
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + I+ LE+L +
Sbjct: 378 GYV--VVDINSPYDEVALEQLKSIEGTISCRVL 408
>gi|213854925|ref|ZP_03383165.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 301
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 216 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNQIFAEQGVNIAAQYLQTSARMGYVVIDI 274
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
DG + L + +
Sbjct: 275 EADGDVAEKALLAMKAIPGTIRARLL 300
>gi|198243954|ref|YP_002217041.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|197938470|gb|ACH75803.1| phosphoglycerate dehydrogenase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|321225738|gb|EFX50792.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
Length = 410
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNLPEVSLPLHG-GRRLMHIHENRPGVLTALNQIFAEQGVNIAAQYLQTSARMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
DG + L + +
Sbjct: 384 EADGDVAEKALLAMKAIPGTIRARLL 409
>gi|326624809|gb|EGE31154.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
Length = 427
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 342 VNLPEVSLPLHG-GRRLMHIHENRPGVLTALNQIFAEQGVNIAAQYLQTSARMGYVVIDI 400
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
DG + L + +
Sbjct: 401 EADGDVAEKALLAMKAIPGTIRARLL 426
>gi|326629099|gb|EGE35442.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 427
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 342 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNQIFAEQGVNIAAQYLQTSARMGYVVIDI 400
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
DG + L + +
Sbjct: 401 EADGDVAEKALLAMKAIPGTIRARLL 426
>gi|205353986|ref|YP_002227787.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205273767|emb|CAR38762.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
Length = 410
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNQIFAEQGVNIAAQYLQTSARMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
DG + L + +
Sbjct: 384 EADGDVAEKALLAMKAIPGTIRARLL 409
>gi|126666910|ref|ZP_01737886.1| Phosphoglycerate dehydrogenase and related dehydrogenase
[Marinobacter sp. ELB17]
gi|126628626|gb|EAZ99247.1| Phosphoglycerate dehydrogenase and related dehydrogenase
[Marinobacter sp. ELB17]
Length = 409
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + + ++ ++ G++ + + GIN+ +L + +
Sbjct: 325 VNFPEVALPSHPNQHRLLHIHENVPGVMSEINQVFSANGINVCGQYLQTKDDIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + LEKL +
Sbjct: 383 DVDKAYGELALEKLLEVKGTIRCRVL 408
>gi|226365951|ref|YP_002783734.1| D-3-phosphoglycerate dehydrogenase [Rhodococcus opacus B4]
gi|226244441|dbj|BAH54789.1| D-3-phosphoglycerate dehydrogenase [Rhodococcus opacus B4]
Length = 531
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 14/111 (12%)
Query: 1 VFSDGKP--------------RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGE 46
VF DG + + I NF++ L + I D G + +G LG
Sbjct: 420 VFGDGSVINVSGTLTGPQQVEKIVNINGRNFELRAEGLNLVINYTDQPGALGKIGTQLGN 479
Query: 47 YGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
GI+I L + E A L +D + + V + +S V ++
Sbjct: 480 AGIDIQAAQLSQDAEGEGATILLRVDREVPSEVRDAISTAVGATKIELVNL 530
>gi|312881738|ref|ZP_07741515.1| D-3-phosphoglycerate dehydrogenase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370628|gb|EFP98103.1| D-3-phosphoglycerate dehydrogenase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 409
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I E GINIA +L S + +
Sbjct: 325 VNFPEVSLPEHRNCSRLLHIHKNRPGILTQINTIFAEDGINIAGQYLQTSADIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
I+ + L KL +
Sbjct: 383 DIESERADEALRKLKAIEGTIRARILH 409
>gi|224155926|ref|XP_002337654.1| predicted protein [Populus trichocarpa]
gi|222869505|gb|EEF06636.1| predicted protein [Populus trichocarpa]
Length = 138
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 39/86 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
D KP K+ DV + +I D G++ VGNILGE +N++ +G+ +
Sbjct: 45 DRKPHLTKVDSFGVDVSMEGSLILCSQVDQPGMIGSVGNILGEETVNVSFMSIGKIAPQK 104
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +D L+++ +
Sbjct: 105 QAVMTVSVDEKPSKEALKRIGEIPAV 130
>gi|225377167|ref|ZP_03754388.1| hypothetical protein ROSEINA2194_02813 [Roseburia inulinivorans DSM
16841]
gi|225211072|gb|EEG93426.1| hypothetical protein ROSEINA2194_02813 [Roseburia inulinivorans DSM
16841]
Length = 388
Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + I I++ ++ G++ LG+ G+NIA
Sbjct: 297 NGNIVHSVNFPDCSMGACTTAGRIGILHRNVSGMISQYSTTLGDAGMNIAGMT--NKSKG 354
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A + +D + + V++KL + V++ +
Sbjct: 355 DYAYVLIDVDSPVTDEVIQKLENIEGVLKVRKVK 388
>gi|84498265|ref|ZP_00997062.1| probable D-3-phosphoglycerate dehydrogenase [Janibacter sp.
HTCC2649]
gi|84381765|gb|EAP97648.1| probable D-3-phosphoglycerate dehydrogenase [Janibacter sp.
HTCC2649]
Length = 528
Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ I + + +V I M D G+V +G +LG +NI + R + A+
Sbjct: 438 KLIGVNGFDLEVAISDHMAFFSYTDRPGVVGVIGALLGAADVNIGGMQVARDDAAGTALV 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D I V+ ++ V+ +
Sbjct: 498 ALTVDNKIPADVVAAIAS-ELSADVRVVDL 526
>gi|305682015|ref|ZP_07404819.1| phosphoglycerate dehydrogenase [Corynebacterium matruchotii ATCC
14266]
gi|305658488|gb|EFM47991.1| phosphoglycerate dehydrogenase [Corynebacterium matruchotii ATCC
14266]
Length = 531
Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 36/78 (46%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I D+ + +D G + VG+ LG+ GINI L + E A+
Sbjct: 442 KIVRINGRGIDLRASGHNLFFNYSDAPGALGIVGSALGDAGINIVAAALTQESGGEFAVL 501
Query: 68 FLCIDGSILNSVLEKLSV 85
L ++ + + +LE ++
Sbjct: 502 ILRVEREVPDELLESIAE 519
>gi|111023450|ref|YP_706422.1| D-3-phosphoglycerate dehydrogenase [Rhodococcus jostii RHA1]
gi|110822980|gb|ABG98264.1| phosphoglycerate dehydrogenase [Rhodococcus jostii RHA1]
Length = 531
Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 14/111 (12%)
Query: 1 VFSDGKP--------------RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGE 46
VF DG + + I NF++ L + + D G + +G LG
Sbjct: 420 VFGDGSVINVSGTLTGPQQVEKIVNINGRNFELRAEGLNLVVNYTDQPGALGKIGTQLGN 479
Query: 47 YGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
GI+I L + E A L +D + + V + +S V ++
Sbjct: 480 AGIDIQAAQLSQDAEGEGATILLRVDREVPSEVRDAISTAVGATKIELVNL 530
>gi|77461608|ref|YP_351115.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas fluorescens Pf0-1]
gi|77385611|gb|ABA77124.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas fluorescens Pf0-1]
Length = 409
Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHENIPGVMSEINKVFAENGINISGQFLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D EKL +
Sbjct: 383 DVDAEYSELAQEKLQHVNGTIRSRVL 408
>gi|254230211|ref|ZP_04923603.1| D-3-phosphoglycerate dehydrogenase [Vibrio sp. Ex25]
gi|151937243|gb|EDN56109.1| D-3-phosphoglycerate dehydrogenase [Vibrio sp. Ex25]
Length = 425
Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 3/88 (3%)
Query: 10 IKIQEINF-DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + GI+ + I E GINIA +L + +
Sbjct: 340 VNFPEVSLPEHGGECSRLLHIHKNRPGILTQINTIFAEDGINIAAQYLQTAAEIGYV--V 397
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ ++ L KL +
Sbjct: 398 IDVETERSEEALAKLKSIEGTIRARILH 425
>gi|254691175|ref|ZP_05154429.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 6 str.
870]
gi|256256361|ref|ZP_05461897.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 9 str.
C68]
gi|260756776|ref|ZP_05869124.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella abortus bv. 6 str. 870]
gi|260882592|ref|ZP_05894206.1| D-isomer specific 2-hydroxyacid dehydrogenase [Brucella abortus bv.
9 str. C68]
gi|297249722|ref|ZP_06933423.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 5 str.
B3196]
gi|260676884|gb|EEX63705.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella abortus bv. 6 str. 870]
gi|260872120|gb|EEX79189.1| D-isomer specific 2-hydroxyacid dehydrogenase [Brucella abortus bv.
9 str. C68]
gi|297173591|gb|EFH32955.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 5 str.
B3196]
Length = 412
Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + V+ + GI+ + N+ + INIA L + +
Sbjct: 326 VNFPQVQLPLRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G ++VL+++ +
Sbjct: 386 DGVGEASDAVLQEIREIPGTIRARLL 411
>gi|323495986|ref|ZP_08101050.1| D-3-phosphoglycerate dehydrogenase [Vibrio sinaloensis DSM 21326]
gi|323318948|gb|EGA71895.1| D-3-phosphoglycerate dehydrogenase [Vibrio sinaloensis DSM 21326]
Length = 409
Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I E GINIA +L + + +
Sbjct: 325 VNFPEVSLPEHRDCSRLLHIHKNRPGILTQINTIFAEEGINIAGQYLQTAADIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ L KL +
Sbjct: 383 DVESGRSEEALAKLKKIEGTIRARILH 409
>gi|327301994|ref|XP_003235689.1| D-3-phosphoglycerate dehydrogenase [Trichophyton rubrum CBS 118892]
gi|326461031|gb|EGD86484.1| D-3-phosphoglycerate dehydrogenase [Trichophyton rubrum CBS 118892]
Length = 571
Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 10/105 (9%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S+ +P +I ++ N D G + VG+ILG+ G+NI +
Sbjct: 467 SESQPLISRIDRFATSFVPEGTLLICHNFDSPGKIGVVGSILGKRGVNINFMSVAPISKG 526
Query: 63 ----------EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D ++ V++ L +
Sbjct: 527 KKQQKEIDSSDEALMILGVDRAVDECVVKGLVNEGGVLSASVVSL 571
>gi|116054043|ref|YP_788486.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|296386810|ref|ZP_06876309.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas aeruginosa PAb1]
gi|313112071|ref|ZP_07797855.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas aeruginosa 39016]
gi|115589264|gb|ABJ15279.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|310884357|gb|EFQ42951.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas aeruginosa 39016]
Length = 409
Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++A+I G++ + + + GIN++ +L + + +
Sbjct: 325 VNFPEVALPSHPGKHRLLHIHANIPGVMSEINKVFADNGINVSGQYLQTNDKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + LEKL +
Sbjct: 383 DVDAEYSDLALEKLQQVNGTIRSRVL 408
>gi|146387102|pdb|2P9C|A Chain A, Crystal Structure Of Serine Bound G336v Mutant Of E.Coli
Phosphoglycerate Dehydrogenase
gi|146387103|pdb|2P9C|B Chain B, Crystal Structure Of Serine Bound G336v Mutant Of E.Coli
Phosphoglycerate Dehydrogenase
gi|146387104|pdb|2P9E|A Chain A, Crystal Structure Of G336v Mutant Of E.Coli
Phosphoglycerate Dehydrogenase
gi|146387105|pdb|2P9E|B Chain B, Crystal Structure Of G336v Mutant Of E.Coli
Phosphoglycerate Dehydrogenase
gi|146387106|pdb|2P9E|C Chain C, Crystal Structure Of G336v Mutant Of E.Coli
Phosphoglycerate Dehydrogenase
gi|146387107|pdb|2P9E|D Chain D, Crystal Structure Of G336v Mutant Of E.Coli
Phosphoglycerate Dehydrogenase
gi|146387110|pdb|2PA3|A Chain A, Crystal Structure Of Serine Bound G336v Mutant Of E.Coli
Phosphoglycerate Dehydrogenase
Length = 410
Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHV-GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 384 EADEDVAEKALQAMKAIPGTIRARLL 409
>gi|157372157|ref|YP_001480146.1| D-3-phosphoglycerate dehydrogenase [Serratia proteamaculans 568]
gi|157323921|gb|ABV43018.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Serratia
proteamaculans 568]
Length = 412
Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 32/87 (36%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + G++ + I E G+NIA +L + +
Sbjct: 325 VNFPEVSLPAHGPNASRLLHIHENRPGVLTQINQIFAEEGVNIAAQYLQTGPEIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ++ L+++ +
Sbjct: 385 IEAETERADAALQRMKAIDGTIRARLL 411
>gi|167747250|ref|ZP_02419377.1| hypothetical protein ANACAC_01964 [Anaerostipes caccae DSM 14662]
gi|317470995|ref|ZP_07930373.1| L-serine dehydratase [Anaerostipes sp. 3_2_56FAA]
gi|167653228|gb|EDR97357.1| hypothetical protein ANACAC_01964 [Anaerostipes caccae DSM 14662]
gi|316901550|gb|EFV23486.1| L-serine dehydratase [Anaerostipes sp. 3_2_56FAA]
Length = 220
Score = 78.9 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 34/93 (36%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ ++ ++ ++ + N D G V ++L + GINIA L R Q
Sbjct: 124 GGGRVEICQMDGLSTTFSGDIPVLIVHNEDSPGHVAAAASLLADAGINIASMRLSRDQRN 183
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ L D I + + I+
Sbjct: 184 GSAVMVLECDQEIPEETVRMIENMKGIQKAASL 216
>gi|149192410|ref|ZP_01870609.1| D-3-phosphoglycerate dehydrogenase [Vibrio shilonii AK1]
gi|148833757|gb|EDL50795.1| D-3-phosphoglycerate dehydrogenase [Vibrio shilonii AK1]
Length = 235
Score = 78.5 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I + GINIA +L + + +
Sbjct: 151 VNFPEVSLPEHTECSRLLHIHKNRPGILTQINTIFADEGINIAGQYLQTASDIGYV--VI 208
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + L KL + +
Sbjct: 209 DVETARSEEALAKLKLIEGTLRARILH 235
>gi|226941104|ref|YP_002796178.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Laribacter hongkongensis HLHK9]
gi|226716031|gb|ACO75169.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Laribacter hongkongensis HLHK9]
Length = 409
Score = 78.5 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + G++ + + G GINIA +L S + +
Sbjct: 325 VNFPEVSLPEQRGHTRLLHIHRNQPGVLAAINDCFGRQGINIAAQYLQTSPELGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + S+L L +
Sbjct: 383 DTDSPVPESLLAGLEALDGTLRCRLL 408
>gi|262404792|ref|ZP_06081347.1| D-3-phosphoglycerate dehydrogenase [Vibrio sp. RC586]
gi|262349824|gb|EEY98962.1| D-3-phosphoglycerate dehydrogenase [Vibrio sp. RC586]
Length = 409
Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ +++ + ++A+ GI+ + I E GINIA +L + + +
Sbjct: 325 VNFPDVSLPEHRNCSRLLHIHANRPGILTQINTIFAEEGINIAAQYLQTTAEIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + L KL +
Sbjct: 383 DVETARSEEALTKLKAIDGTIRARILH 409
>gi|261211574|ref|ZP_05925862.1| D-3-phosphoglycerate dehydrogenase [Vibrio sp. RC341]
gi|260839529|gb|EEX66155.1| D-3-phosphoglycerate dehydrogenase [Vibrio sp. RC341]
Length = 409
Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ +++ + ++A+ GI+ + I E GINIA +L + + +
Sbjct: 325 VNFPDVSLPEHRNCSRLLHIHANRPGILTQINTIFAEEGINIAAQYLQTTAEIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + L KL +
Sbjct: 383 DVETARSEEALTKLKAIDGTIRARILH 409
>gi|119468966|ref|ZP_01611991.1| D-3-phosphoglycerate dehydrogenase [Alteromonadales bacterium TW-7]
gi|119447618|gb|EAW28885.1| D-3-phosphoglycerate dehydrogenase [Alteromonadales bacterium TW-7]
Length = 409
Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ R + V+ + G++ + ++GINIA +L ++ + +
Sbjct: 325 VNFPEVSLPELANRSRLLHVHHNRPGVLTQINQAFAQHGINIAAQYLQTDEAIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D L++LS +
Sbjct: 383 DVDTDHSEVALKELSAVEGTIRARILH 409
>gi|160895796|ref|YP_001561378.1| NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase [Delftia
acidovorans SPH-1]
gi|160361380|gb|ABX32993.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Delftia
acidovorans SPH-1]
Length = 409
Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ I V+ + G++ + + E GINIA +L + + +
Sbjct: 325 VNFPEVALPAHPGQNRILHVHHNQPGVLSAINQVFAENGINIAGQYLRTDEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ +EKL+ +
Sbjct: 383 DLAAQSSGLAVEKLTQVPGTIRCRVL 408
>gi|311278167|ref|YP_003940398.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Enterobacter cloacae SCF1]
gi|308747362|gb|ADO47114.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Enterobacter cloacae SCF1]
Length = 410
Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I + G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLLHIHENRPGVLTSLNQIFADQGVNIAAQYLQTSPKIGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D I L + +
Sbjct: 384 EADEDIAEKALLSMKAIPGTIRARLL 409
>gi|299533732|ref|ZP_07047104.1| D-isomer specific 2-hydroxyacid dehydrogenase [Comamonas
testosteroni S44]
gi|298718281|gb|EFI59266.1| D-isomer specific 2-hydroxyacid dehydrogenase [Comamonas
testosteroni S44]
Length = 409
Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G I V+ + GI+ + + + GINIA +L + + +
Sbjct: 325 VNFPEVALPEHPGNNRILHVHENRPGILSAINQVFADNGINIAGQYLRTDEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID LEKL+ +
Sbjct: 383 DIDAKSSALALEKLAQIAGTIRCRVL 408
>gi|296171277|ref|ZP_06852681.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894245|gb|EFG74002.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 528
Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 35/90 (38%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I NFD+ + I D G + +G +LG G+NI L A
Sbjct: 438 KIVQINGRNFDLRAQGTNLVINYVDQPGALGKIGTLLGSAGVNIQAAQLSEDAEGPGATI 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D + N V + V ++ +
Sbjct: 498 LLRLDQDVPNEVRSAIGAAVGANKLEVVDL 527
>gi|170766091|ref|ZP_02900902.1| phosphoglycerate dehydrogenase [Escherichia albertii TW07627]
gi|170125237|gb|EDS94168.1| phosphoglycerate dehydrogenase [Escherichia albertii TW07627]
gi|323966714|gb|EGB62146.1| D-isomer specific 2-hydroxyacid dehydrogenase [Escherichia coli
M863]
gi|327251677|gb|EGE63363.1| D-3-phosphoglycerate dehydrogenase [Escherichia coli STEC_7v]
Length = 410
Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + V +
Sbjct: 384 EADEDVAEKALQAMKVIPGTIRARLL 409
>gi|262393252|ref|YP_003285106.1| D-3-phosphoglycerate dehydrogenase [Vibrio sp. Ex25]
gi|262336846|gb|ACY50641.1| D-3-phosphoglycerate dehydrogenase [Vibrio sp. Ex25]
Length = 410
Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 3/88 (3%)
Query: 10 IKIQEINF-DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + GI+ + I E GINIA +L + +
Sbjct: 325 VNFPEVSLPEHGGECSRLLHIHKNRPGILTQINTIFAEDGINIAAQYLQTAAEIGYV--V 382
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ ++ L KL +
Sbjct: 383 IDVETERSEEALAKLKSIEGTIRARILH 410
>gi|154247745|ref|YP_001418703.1| D-3-phosphoglycerate dehydrogenase [Xanthobacter autotrophicus Py2]
gi|154161830|gb|ABS69046.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Xanthobacter autotrophicus Py2]
Length = 429
Score = 78.5 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 28/86 (32%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ ++ ++ G++ + +L + +NIA +L + +
Sbjct: 339 VNFPEVQLPARPTGTRFIQIHRNLPGMLGRLNEVLARHSVNIAAQYLETYADVGYVVLDA 398
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ SVL + +
Sbjct: 399 DASTADSQSVLADIREIEGTIRARLL 424
>gi|221069486|ref|ZP_03545591.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Comamonas testosteroni KF-1]
gi|220714509|gb|EED69877.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Comamonas testosteroni KF-1]
Length = 409
Score = 78.2 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G I V+ + GI+ + + + GINIA +L + + +
Sbjct: 325 VNFPEVALPEHPGNNRILHVHENRPGILSAINQVFADNGINIAGQYLRTDEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID LEKL+ +
Sbjct: 383 DIDAKSSALALEKLAQIAGTIRCRVL 408
>gi|218754755|ref|ZP_03533551.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis GM
1503]
gi|289763176|ref|ZP_06522554.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis GM 1503]
gi|289710682|gb|EFD74698.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis GM 1503]
Length = 438
Score = 78.2 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I +FD+ + + I D G + +G +LG G+NI L A
Sbjct: 348 KIVQINGRHFDLRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATI 407
Query: 68 FLCIDGSILNSVLEKLSV 85
L +D + + V ++
Sbjct: 408 LLRLDQDVPDDVRTAIAA 425
>gi|330989955|gb|EGH88058.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 103
Score = 78.2 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 19 VNFPEVALPAHPGKHRLLHIHENIPGVLSEINKVFAENGINISGQFLQTNEKVGYV--VI 76
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + KL +
Sbjct: 77 DVDAEYSDLAQAKLQQIKGTIRSRVL 102
>gi|264676406|ref|YP_003276312.1| D-isomer specific 2-hydroxyacid dehydrogenase [Comamonas
testosteroni CNB-2]
gi|262206918|gb|ACY31016.1| D-isomer specific 2-hydroxyacid dehydrogenase [Comamonas
testosteroni CNB-2]
Length = 415
Score = 78.2 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G I V+ + GI+ + + + GINIA +L + + +
Sbjct: 331 VNFPEVALPEHPGNNRILHVHENRPGILSAINQVFADNGINIAGQYLRTDEKVGYV--VI 388
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID LEKL+ +
Sbjct: 389 DIDAKSSALALEKLAQIAGTIRCRVL 414
>gi|89900653|ref|YP_523124.1| D-3-phosphoglycerate dehydrogenase [Rhodoferax ferrireducens T118]
gi|89345390|gb|ABD69593.1| D-3-phosphoglycerate dehydrogenase [Rhodoferax ferrireducens T118]
Length = 413
Score = 78.2 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ GR + ++ ++ G++ V L E GINIA +L ++ + +
Sbjct: 329 VNFPEVALPAHTGRSRLLHIHHNVPGVMAHVNERLSEAGINIAAQYLSTNEEVGYV--VI 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + L++L +
Sbjct: 387 DVDSAASQVALDELCAVPETIRCRIL 412
>gi|317125479|ref|YP_004099591.1| D-3-phosphoglycerate dehydrogenase [Intrasporangium calvum DSM
43043]
gi|315589567|gb|ADU48864.1| D-3-phosphoglycerate dehydrogenase [Intrasporangium calvum DSM
43043]
Length = 527
Score = 78.2 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I + +V + M+ +D GI+ VG ILG+ G+NI + R+ + AI
Sbjct: 438 KLVGINGYDLEVPLSDHMLIFEYSDRPGIIGAVGRILGDSGVNIGGMQVSRAA--DQAIG 495
Query: 68 FLCIDGSILNSV 79
L +D ++ + +
Sbjct: 496 VLNVDSAVSSQL 507
>gi|237785818|ref|YP_002906523.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758730|gb|ACR17980.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium kroppenstedtii
DSM 44385]
Length = 532
Score = 78.2 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 46/95 (48%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG + ++I + D+ + + D G + VG+ LGE GIN+ L + ++
Sbjct: 438 DGVEKIVRINDRGLDLRAEGRNVFLHYKDRPGALGAVGSQLGERGINVEAAALSQDKAGT 497
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A L +D ++ + V+E + ++ ++ +F+
Sbjct: 498 GATLALRVDKAVPDDVMESMKASLDAQYAIALDFD 532
>gi|254365629|ref|ZP_04981674.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis str. Haarlem]
gi|134151142|gb|EBA43187.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis str. Haarlem]
Length = 528
Score = 78.2 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I +FD+ + + I D G + +G +LG G+NI L A
Sbjct: 438 KIVQINGRHFDLRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATI 497
Query: 68 FLCIDGSILNSVLEKLSV 85
L +D + + V ++
Sbjct: 498 LLRLDQDVPDDVRTAIAA 515
>gi|15842552|ref|NP_337589.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis
CDC1551]
gi|31794172|ref|NP_856665.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium bovis AF2122/97]
gi|57117042|ref|YP_177916.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis
H37Rv]
gi|121638877|ref|YP_979101.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148662846|ref|YP_001284369.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis
H37Ra]
gi|148824186|ref|YP_001288940.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis F11]
gi|167967839|ref|ZP_02550116.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis H37Ra]
gi|215404980|ref|ZP_03417161.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis
02_1987]
gi|215428447|ref|ZP_03426366.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis T92]
gi|215431947|ref|ZP_03429866.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis
EAS054]
gi|224991369|ref|YP_002646058.1| putative D-3-phosphoglycerate dehydrogenase [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253797911|ref|YP_003030912.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis KZN 1435]
gi|254233079|ref|ZP_04926406.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis C]
gi|254552073|ref|ZP_05142520.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260188020|ref|ZP_05765494.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis
CPHL_A]
gi|260202137|ref|ZP_05769628.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis T46]
gi|260206320|ref|ZP_05773811.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis K85]
gi|289444561|ref|ZP_06434305.1| phosphoglycerate dehydrogenase [Mycobacterium tuberculosis T46]
gi|289448668|ref|ZP_06438412.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis CPHL_A]
gi|289553214|ref|ZP_06442424.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis KZN 605]
gi|289575703|ref|ZP_06455930.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis K85]
gi|289746800|ref|ZP_06506178.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis 02_1987]
gi|289751673|ref|ZP_06511051.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis T92]
gi|289755114|ref|ZP_06514492.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis EAS054]
gi|294993916|ref|ZP_06799607.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis 210]
gi|297635621|ref|ZP_06953401.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis KZN
4207]
gi|297732619|ref|ZP_06961737.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis KZN
R506]
gi|306777289|ref|ZP_07415626.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu001]
gi|306781200|ref|ZP_07419537.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu002]
gi|306785839|ref|ZP_07424161.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu003]
gi|306789879|ref|ZP_07428201.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu004]
gi|306794690|ref|ZP_07432992.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu005]
gi|306798933|ref|ZP_07437235.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu006]
gi|306804778|ref|ZP_07441446.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu008]
gi|306969070|ref|ZP_07481731.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu009]
gi|306973407|ref|ZP_07486068.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu010]
gi|307081115|ref|ZP_07490285.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu011]
gi|307085720|ref|ZP_07494833.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu012]
gi|313659951|ref|ZP_07816831.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis KZN
V2475]
gi|61242571|sp|P0A544|SERA_MYCTU RecName: Full=D-3-phosphoglycerate dehydrogenase; Short=PGDH
gi|61242577|sp|P0A545|SERA_MYCBO RecName: Full=D-3-phosphoglycerate dehydrogenase; Short=PGDH
gi|13882863|gb|AAK47403.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis
CDC1551]
gi|31619767|emb|CAD96707.1| PROBABLE D-3-PHOSPHOGLYCERATE DEHYDROGENASE SERA1 (PGDH)
[Mycobacterium bovis AF2122/97]
gi|41352771|emb|CAE55535.1| PROBABLE D-3-PHOSPHOGLYCERATE DEHYDROGENASE SERA1 (PGDH)
[Mycobacterium tuberculosis H37Rv]
gi|121494525|emb|CAL73006.1| Probable D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|124602138|gb|EAY61148.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis C]
gi|148506998|gb|ABQ74807.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis
H37Ra]
gi|148722713|gb|ABR07338.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis F11]
gi|224774484|dbj|BAH27290.1| putative D-3-phosphoglycerate dehydrogenase [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253319414|gb|ACT24017.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis KZN 1435]
gi|289417480|gb|EFD14720.1| phosphoglycerate dehydrogenase [Mycobacterium tuberculosis T46]
gi|289421626|gb|EFD18827.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis CPHL_A]
gi|289437846|gb|EFD20339.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis KZN 605]
gi|289540134|gb|EFD44712.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis K85]
gi|289687328|gb|EFD54816.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis 02_1987]
gi|289692260|gb|EFD59689.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis T92]
gi|289695701|gb|EFD63130.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis EAS054]
gi|308214339|gb|EFO73738.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu001]
gi|308325983|gb|EFP14834.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu002]
gi|308329514|gb|EFP18365.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu003]
gi|308333653|gb|EFP22504.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu004]
gi|308337010|gb|EFP25861.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu005]
gi|308340824|gb|EFP29675.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu006]
gi|308348637|gb|EFP37488.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu008]
gi|308353362|gb|EFP42213.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu009]
gi|308357207|gb|EFP46058.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu010]
gi|308361161|gb|EFP50012.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu011]
gi|308364754|gb|EFP53605.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu012]
gi|323718375|gb|EGB27549.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis CDC1551A]
gi|326904610|gb|EGE51543.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis W-148]
gi|328457686|gb|AEB03109.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis KZN 4207]
Length = 528
Score = 78.2 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I +FD+ + + I D G + +G +LG G+NI L A
Sbjct: 438 KIVQINGRHFDLRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATI 497
Query: 68 FLCIDGSILNSVLEKLSV 85
L +D + + V ++
Sbjct: 498 LLRLDQDVPDDVRTAIAA 515
>gi|296803933|ref|XP_002842819.1| D-3-phosphoglycerate dehydrogenase [Arthroderma otae CBS 113480]
gi|238846169|gb|EEQ35831.1| D-3-phosphoglycerate dehydrogenase [Arthroderma otae CBS 113480]
Length = 571
Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 37/102 (36%), Gaps = 9/102 (8%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S+ +P ++ ++ N D G + VG+ILG G+NI +
Sbjct: 468 SESQPLISRLDRFTASFVPEGTLLICHNFDSPGKIGVVGSILGGKGVNINFMSVAPVSKG 527
Query: 63 ---------EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ L +D ++ SV++ L +
Sbjct: 528 KQQDGVGAYDEALMILGVDKAVDESVVKALVQEGGVLNASVV 569
>gi|254283136|ref|ZP_04958104.1| chain A, D-3-Phosphoglycerate Dehydrogenase [gamma proteobacterium
NOR51-B]
gi|219679339|gb|EED35688.1| chain A, D-3-Phosphoglycerate Dehydrogenase [gamma proteobacterium
NOR51-B]
Length = 409
Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 28/86 (32%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + + V+ ++ G++ I E GINI +L + +
Sbjct: 325 VNFPEVALPEHDDQHRLLHVHRNVPGVMGAFNRIFSESGINICAQYLQTINDIGYV--VV 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D L +L +
Sbjct: 383 DVDSEYSERALAQLRAIEGTLRCRVL 408
>gi|194368789|pdb|3DDN|A Chain A, Crystal Structure Of Hydroxypyruvic Acid Phosphate Bound
D- 3-Phosphoglycerate Dehydrogenase In Mycobacterium
Tuberculosis
gi|194368790|pdb|3DDN|B Chain B, Crystal Structure Of Hydroxypyruvic Acid Phosphate Bound
D- 3-Phosphoglycerate Dehydrogenase In Mycobacterium
Tuberculosis
Length = 528
Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I +FD+ + + I D G + +G +LG G+NI L A
Sbjct: 438 KIVQINGRHFDLRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATI 497
Query: 68 FLCIDGSILNSVLEKLSV 85
L +D + + V ++
Sbjct: 498 LLRLDQDVPDDVRTAIAA 515
>gi|308375950|ref|ZP_07445640.2| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu007]
gi|308344687|gb|EFP33538.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis SUMu007]
Length = 526
Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I +FD+ + + I D G + +G +LG G+NI L A
Sbjct: 436 KIVQINGRHFDLRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATI 495
Query: 68 FLCIDGSILNSVLEKLSV 85
L +D + + V ++
Sbjct: 496 LLRLDQDVPDDVRTAIAA 513
>gi|300718224|ref|YP_003743027.1| D-3-phosphoglycerate dehydrogenase [Erwinia billingiae Eb661]
gi|299064060|emb|CAX61180.1| D-3-phosphoglycerate dehydrogenase [Erwinia billingiae Eb661]
Length = 411
Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 34/86 (39%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + + ++ + G++ + NI + G+NIA +L + + + +
Sbjct: 325 VNFPEVSLPMHGDQSRLLHIHENRPGVLTAINNIFADQGVNIAAQYLQTTPQMGYVVIDV 384
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + L+ + +
Sbjct: 385 DAPQDVADKALQLMKAIPGTIRARLL 410
>gi|60594357|pdb|1YGY|A Chain A, Crystal Structure Of D-3-Phosphoglycerate Dehydrogenase
From Mycobacterium Tuberculosis
gi|60594358|pdb|1YGY|B Chain B, Crystal Structure Of D-3-Phosphoglycerate Dehydrogenase
From Mycobacterium Tuberculosis
gi|313507314|pdb|3DC2|A Chain A, Crystal Structure Of Serine Bound D-3-Phosphoglycerate
Dehydrogenase From Mycobacterium Tuberculosis
gi|313507315|pdb|3DC2|B Chain B, Crystal Structure Of Serine Bound D-3-Phosphoglycerate
Dehydrogenase From Mycobacterium Tuberculosis
Length = 529
Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I +FD+ + + I D G + +G +LG G+NI L A
Sbjct: 439 KIVQINGRHFDLRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATI 498
Query: 68 FLCIDGSILNSVLEKLSV 85
L +D + + V ++
Sbjct: 499 LLRLDQDVPDDVRTAIAA 516
>gi|77359618|ref|YP_339193.1| D-3-phosphoglycerate dehydrogenase [Pseudoalteromonas haloplanktis
TAC125]
gi|76874529|emb|CAI85750.1| D-3-phosphoglycerate dehydrogenase [Pseudoalteromonas haloplanktis
TAC125]
Length = 409
Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ R + V+ + G++ + ++GINIA +L +S + +
Sbjct: 325 VNFPEVSLPELANRSRLLHVHHNRPGVLTQINQAFAQHGINIAAQYLQTDESIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D L++LS +
Sbjct: 383 DVDTDHSEVALKELSAVEGTIRARILH 409
>gi|66360690|pdb|1YBA|A Chain A, The Active Form Of Phosphoglycerate Dehydrogenase
gi|66360691|pdb|1YBA|B Chain B, The Active Form Of Phosphoglycerate Dehydrogenase
gi|66360692|pdb|1YBA|C Chain C, The Active Form Of Phosphoglycerate Dehydrogenase
gi|66360693|pdb|1YBA|D Chain D, The Active Form Of Phosphoglycerate Dehydrogenase
Length = 410
Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLXHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQXGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ +
Sbjct: 384 EADEDVAEKALQAXKAIPGTIRARLL 409
>gi|258622362|ref|ZP_05717387.1| D-3-phosphoglycerate dehydrogenase [Vibrio mimicus VM573]
gi|258625343|ref|ZP_05720242.1| D-3-phosphoglycerate dehydrogenase [Vibrio mimicus VM603]
gi|262170573|ref|ZP_06038251.1| D-3-phosphoglycerate dehydrogenase [Vibrio mimicus MB-451]
gi|258582384|gb|EEW07234.1| D-3-phosphoglycerate dehydrogenase [Vibrio mimicus VM603]
gi|258585378|gb|EEW10102.1| D-3-phosphoglycerate dehydrogenase [Vibrio mimicus VM573]
gi|261891649|gb|EEY37635.1| D-3-phosphoglycerate dehydrogenase [Vibrio mimicus MB-451]
Length = 409
Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ +++ + ++A+ GI+ + I E GINIA +L + + +
Sbjct: 325 VNFPDVSLPEHRNCSRLLHIHANRPGILTQINTIFAEEGINIAAQYLQTTAEIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + L KL +
Sbjct: 383 DVETARSEEALTKLKAIDGTIRARILH 409
>gi|262166518|ref|ZP_06034255.1| D-3-phosphoglycerate dehydrogenase [Vibrio mimicus VM223]
gi|262026234|gb|EEY44902.1| D-3-phosphoglycerate dehydrogenase [Vibrio mimicus VM223]
Length = 383
Score = 77.8 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ +++ + ++A+ GI+ + I E GINIA +L + + +
Sbjct: 299 VNFPDVSLPEHRNCSRLLHIHANRPGILTQINTIFAEEGINIAAQYLQTTAEIGYV--VI 356
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + L KL +
Sbjct: 357 DVETARSEEALTKLKAIDGTIRARILH 383
>gi|27364916|ref|NP_760444.1| D-3-phosphoglycerate dehydrogenase [Vibrio vulnificus CMCP6]
gi|320155300|ref|YP_004187679.1| D-3-phosphoglycerate dehydrogenase [Vibrio vulnificus MO6-24/O]
gi|27361062|gb|AAO09971.1| D-3-phosphoglycerate dehydrogenase [Vibrio vulnificus CMCP6]
gi|319930612|gb|ADV85476.1| D-3-phosphoglycerate dehydrogenase [Vibrio vulnificus MO6-24/O]
Length = 409
Score = 77.8 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I E GINIA +L S + +
Sbjct: 325 VNFPEVSLPEHRSCSRLLHIHQNRPGILTQINTIFAEEGINIAGQYLQTSADIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ L KL +
Sbjct: 383 DVETERSEEALVKLKEIEGTIRARILH 409
>gi|117619317|ref|YP_857239.1| D-3-phosphoglycerate dehydrogenase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560724|gb|ABK37672.1| D-3-phosphoglycerate dehydrogenase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 445
Score = 77.8 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + G++ + I + GINIA +L S + +
Sbjct: 361 VNFPEVSLPGHKGSSRLLHIHRNQPGVMNQINQIFADEGINIAGQYLQTSSHIGYV--VI 418
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ L KL +
Sbjct: 419 DVETEHSEKALAKLKEIGGTIRARILH 445
>gi|28899367|ref|NP_798972.1| D-3-phosphoglycerate dehydrogenase [Vibrio parahaemolyticus RIMD
2210633]
gi|260878945|ref|ZP_05891300.1| phosphoglycerate dehydrogenase [Vibrio parahaemolyticus AN-5034]
gi|260898254|ref|ZP_05906750.1| phosphoglycerate dehydrogenase [Vibrio parahaemolyticus Peru-466]
gi|260899620|ref|ZP_05908015.1| phosphoglycerate dehydrogenase [Vibrio parahaemolyticus AQ4037]
gi|28807603|dbj|BAC60856.1| D-3-phosphoglycerate dehydrogenase [Vibrio parahaemolyticus RIMD
2210633]
gi|308085857|gb|EFO35552.1| phosphoglycerate dehydrogenase [Vibrio parahaemolyticus Peru-466]
gi|308090450|gb|EFO40145.1| phosphoglycerate dehydrogenase [Vibrio parahaemolyticus AN-5034]
gi|308108223|gb|EFO45763.1| phosphoglycerate dehydrogenase [Vibrio parahaemolyticus AQ4037]
gi|328474103|gb|EGF44908.1| D-3-phosphoglycerate dehydrogenase [Vibrio parahaemolyticus 10329]
Length = 410
Score = 77.8 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 3/88 (3%)
Query: 10 IKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + GI+ + I E GINIA +L +
Sbjct: 325 VNFPEVSLPEHGRECSRLLHIHKNRPGILTQINTIFAEEGINIAAQYLQTEAEIGYV--V 382
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ ++ L KL +
Sbjct: 383 IDVETERSEEALTKLKSIEGTIRARILH 410
>gi|229593199|ref|YP_002875318.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas fluorescens SBW25]
gi|312963707|ref|ZP_07778178.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas fluorescens WH6]
gi|229365065|emb|CAY53254.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas fluorescens SBW25]
gi|311281742|gb|EFQ60352.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas fluorescens WH6]
Length = 409
Score = 77.8 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G+++ + + E GINI+ L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHQNIPGVMMEINKVFAENGINISGQFLQTNEKVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + EKL +
Sbjct: 383 DVDAEYSDLAQEKLQHINGTIRSRVL 408
>gi|237729854|ref|ZP_04560335.1| D-3-phosphoglycerate dehydrogenase [Citrobacter sp. 30_2]
gi|226908460|gb|EEH94378.1| D-3-phosphoglycerate dehydrogenase [Citrobacter sp. 30_2]
Length = 410
Score = 77.8 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNQIFAEQGVNIAAQYLQTSAQVGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L + +
Sbjct: 384 EADEDVAEKALLAMKALPGTIRARLL 409
>gi|323491217|ref|ZP_08096403.1| D-3-phosphoglycerate dehydrogenase [Vibrio brasiliensis LMG 20546]
gi|323314585|gb|EGA67663.1| D-3-phosphoglycerate dehydrogenase [Vibrio brasiliensis LMG 20546]
Length = 409
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I E GINIA +L + + +
Sbjct: 325 VNFPEVSLPEHRDCSRLLHIHQNRPGILTQINTIFAEEGINIAGQYLQTAA--DFGYVVI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ L+KL +
Sbjct: 383 DVETERSEEALKKLKSIEGTIRARILH 409
>gi|330934580|ref|XP_003304604.1| hypothetical protein PTT_17253 [Pyrenophora teres f. teres 0-1]
gi|311318673|gb|EFQ87289.1| hypothetical protein PTT_17253 [Pyrenophora teres f. teres 0-1]
Length = 586
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 14/107 (13%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLG------- 57
+P ++ + + ++ N D +G + +VGN+LG+ G+NI ++
Sbjct: 480 NRPFISRLDKFKGEFVPRGTLLICRNFDSVGKIGYVGNVLGKAGVNIKFMNVAPLDEEVE 539
Query: 58 ---RSQSTE----HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
Q+ A+ L +DG + VL++L + F
Sbjct: 540 ERQNEQNGGQGHKEALMILGVDGRVGEDVLKRLIGEEGVLEASVVNF 586
>gi|37681036|ref|NP_935645.1| D-3-phosphoglycerate dehydrogenase [Vibrio vulnificus YJ016]
gi|37199786|dbj|BAC95616.1| phosphoglycerate dehydrogenase [Vibrio vulnificus YJ016]
Length = 409
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I E GINIA +L S + +
Sbjct: 325 VNFPEVSLPEHRSCSRLLHIHQNRPGILTQINTIFAEEGINIAGQYLQTSADIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ L KL +
Sbjct: 383 DVETERSEEALVKLKEIEGTIRARILH 409
>gi|153840275|ref|ZP_01992942.1| D-3-phosphoglycerate dehydrogenase [Vibrio parahaemolyticus AQ3810]
gi|149746063|gb|EDM57193.1| D-3-phosphoglycerate dehydrogenase [Vibrio parahaemolyticus AQ3810]
Length = 342
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 3/88 (3%)
Query: 10 IKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + GI+ + I E GINIA +L +
Sbjct: 257 VNFPEVSLPEHGRECSRLLHIHKNRPGILTQINTIFAEEGINIAAQYLQTEAEIGYV--V 314
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ ++ L KL +
Sbjct: 315 IDVETERSEEALTKLKSIEGTIRARILH 342
>gi|88858289|ref|ZP_01132931.1| D-3-phosphoglycerate dehydrogenase [Pseudoalteromonas tunicata D2]
gi|88819906|gb|EAR29719.1| D-3-phosphoglycerate dehydrogenase [Pseudoalteromonas tunicata D2]
Length = 410
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ GR + V+ + GI+ + ++GINIA +L +++ + +
Sbjct: 326 VNFPEVSLPELAGRSRLLHVHHNRPGILTQINQAFAQHGINIAAQYLQTNETIGYV--VI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D L++L +
Sbjct: 384 DVDTDDSEIALKELRAVEGTIKARILH 410
>gi|116202061|ref|XP_001226842.1| hypothetical protein CHGG_08915 [Chaetomium globosum CBS 148.51]
gi|88177433|gb|EAQ84901.1| hypothetical protein CHGG_08915 [Chaetomium globosum CBS 148.51]
Length = 1359
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 39/114 (34%), Gaps = 21/114 (18%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S K+ + ++ + N D G + VG +LG++G+NI + +
Sbjct: 472 SGNAVFISKLDRFRANFQPEGTLLVLHNYDEPGKIGNVGMVLGKHGVNINFMQVAALEDG 531
Query: 63 ---------------------EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A+ L + G + +L +L+ + I +
Sbjct: 532 AGTSTVVPVVDGPVETAGPAAKEALMILGVAGDVTEGLLSELNQSEGILHLSLL 585
>gi|302894595|ref|XP_003046178.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727105|gb|EEU40465.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 568
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 13/108 (12%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR---- 58
SD + K+ N +I + N D G + VG +LG +GINI +
Sbjct: 461 SDERVFISKLDRFNGVFTAEGTLIILHNYDEPGKIGGVGTVLGMHGINIKSMQVASLDPE 520
Query: 59 ---------SQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L + G + N VLE L + + V +
Sbjct: 521 ASKGAETPPDPKGDEALMILGVLGPVSNEVLEGLKNSEGVLDVSLVQL 568
>gi|89093525|ref|ZP_01166473.1| D-3-phosphoglycerate dehydrogenase [Oceanospirillum sp. MED92]
gi|89082215|gb|EAR61439.1| D-3-phosphoglycerate dehydrogenase [Oceanospirillum sp. MED92]
Length = 410
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 33/93 (35%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + E+ + V+ ++ GI+ + ++ E INI+ +L ++
Sbjct: 319 NGSSITSVNFPEVALPEHPNVHRLLHVHNNVPGIMTAINSVFSENSINISGQYLQTNEKV 378
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +D L+ L ++
Sbjct: 379 GYV--VVDVDADYSQVALQNLRQIEGTIRCRRL 409
>gi|171681876|ref|XP_001905881.1| hypothetical protein [Podospora anserina S mat+]
gi|170940897|emb|CAP66547.1| unnamed protein product [Podospora anserina S mat+]
Length = 588
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 16/111 (14%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLG----- 57
S K+ + + ++ + N D G + VG +LG +GINI +
Sbjct: 478 SGNAVFISKLDKFAANFQPEGTLLILHNYDEPGKIGNVGMVLGRHGINITFMQVAGLNQE 537
Query: 58 -----------RSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L + G + +LE+L I V +
Sbjct: 538 ARRAVVDGPVDTENGLKEALMILGVGGDVTGELLEELGKAEGILDVSVVQL 588
>gi|88797150|ref|ZP_01112740.1| D-3-phosphoglycerate dehydrogenase [Reinekea sp. MED297]
gi|88780019|gb|EAR11204.1| D-3-phosphoglycerate dehydrogenase [Reinekea sp. MED297]
Length = 409
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ I ++ +I G++ + + E INI +L S+ + +
Sbjct: 325 VNFPEVALPAHPNAHRILHIHENIPGVMSEINQVFSENNINIMGQYLQTSEKIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ LEK+ +
Sbjct: 383 DVAQDCSRKALEKVLQVKGTLRARVL 408
>gi|225686257|ref|YP_002734229.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis ATCC 23457]
gi|256262607|ref|ZP_05465139.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 2 str.
63/9]
gi|225642362|gb|ACO02275.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Brucella
melitensis ATCC 23457]
gi|263092393|gb|EEZ16646.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 2 str.
63/9]
gi|326410616|gb|ADZ67680.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis M28]
gi|326553908|gb|ADZ88547.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis M5-90]
Length = 414
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + GI+ + N+ + INIA L + +
Sbjct: 328 VNFPQVQLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 387
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G ++VL+++ +
Sbjct: 388 DGVGEASDAVLQEIREIPGTIRARLL 413
>gi|229828673|ref|ZP_04454742.1| hypothetical protein GCWU000342_00739 [Shuttleworthia satelles DSM
14600]
gi|229793267|gb|EEP29381.1| hypothetical protein GCWU000342_00739 [Shuttleworthia satelles DSM
14600]
Length = 222
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 35/96 (36%), Gaps = 2/96 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEY--GINIAHFHLGRSQ 60
G R + + + I +++ D G++ V N++ +NI +F L R +
Sbjct: 125 GGGNIRVDFVNGMEVNFTGENNTILVLHRDRPGVIADVTNLMRVKYSDVNIGNFKLSRKE 184
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A+ + ID + E++ +
Sbjct: 185 KGSTALMTIEIDQMPPLGMTEEIESLDNVERALLIR 220
>gi|311747292|ref|ZP_07721077.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Algoriphagus sp. PR1]
gi|126579005|gb|EAZ83169.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Algoriphagus sp. PR1]
Length = 225
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 33/93 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++ + + I D+ G + F+ +++ + NIA + R
Sbjct: 128 GGGIINIAEVDGFVANFSAKNHTLIIKAEDVSGAIAFISSVIAQEKTNIATMSVSRKGKN 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + +D I L+ L I+ +
Sbjct: 188 DRACHVIEMDSGIQEITLQYLKSLPWIKELIYI 220
>gi|332037741|gb|EGI74192.1| D-3-phosphoglycerate dehydrogenase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 409
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ R + V+ + G++ + ++GINIA +L S + +
Sbjct: 325 VNFPEVSLPELANRSRLLHVHHNRPGVLTQINQAFAQHGINIAAQYLQTDASIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D L++LS +
Sbjct: 383 DVDTDQSEVALKELSAVEGTIRARILH 409
>gi|312216238|emb|CBX96189.1| similar to d-3-phosphoglycerate dehydrogenase [Leptosphaeria
maculans]
Length = 620
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 39/107 (36%), Gaps = 12/107 (11%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLG----- 57
S KP ++ + + ++ N D G + FVGN+LG+ G+NI +
Sbjct: 514 SGNKPFISRLDKFRGEFVPRGTLLICRNFDSCGKIGFVGNLLGKAGVNIKFMSVAPLDEE 573
Query: 58 -----RSQSTE--HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D + +V + L + F
Sbjct: 574 IEERQNGEERGSNEALMILGVDRPVDETVQKALIGPEGVLEASVVNF 620
>gi|152998305|ref|YP_001343140.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
subunit [Marinomonas sp. MWYL1]
gi|150839229|gb|ABR73205.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Marinomonas sp. MWYL1]
Length = 409
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 28/86 (32%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ I ++ + G++ + I E INI +L ++ +
Sbjct: 325 VNFPEVALPAQADNHRILHIHENRPGVLSKINAIFSENNINITGQYLRTTEKLG--YMVM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D LEK+ +
Sbjct: 383 DVDAEEGELALEKVREVEGTIKARVL 408
>gi|283835322|ref|ZP_06355063.1| D-3-phosphoglycerate dehydrogenase [Citrobacter youngae ATCC 29220]
gi|291068484|gb|EFE06593.1| D-3-phosphoglycerate dehydrogenase [Citrobacter youngae ATCC 29220]
Length = 410
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNQIFAEQGVNIAAQYLQTSAQVGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L + +
Sbjct: 384 EADEDVAEKALLAMKALPGTIRARLL 409
>gi|157148452|ref|YP_001455771.1| D-3-phosphoglycerate dehydrogenase [Citrobacter koseri ATCC
BAA-895]
gi|157085657|gb|ABV15335.1| hypothetical protein CKO_04278 [Citrobacter koseri ATCC BAA-895]
Length = 410
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLMHIHENRPGVLTALNQIFAEQGVNIAAQYLQTSAQVGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L + +
Sbjct: 384 EADEDVAEKALLAMKALPGTIRARLL 409
>gi|295697599|ref|YP_003590837.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
tusciae DSM 2912]
gi|295413201|gb|ADG07693.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
tusciae DSM 2912]
Length = 222
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 33/82 (40%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
GK ++ + R + + + D+ G + V +L G NIA L R +
Sbjct: 126 GGGKVEIQELDGLPVKFSGDRPTLILYHRDVRGFLAGVSRLLDNQGYNIARLVLERWKKG 185
Query: 63 EHAISFLCIDGSILNSVLEKLS 84
A++ +D I +L+ L
Sbjct: 186 GAAVTVCEVDEEIRPELLDILR 207
>gi|302666561|ref|XP_003024878.1| hypothetical protein TRV_00953 [Trichophyton verrucosum HKI 0517]
gi|291188954|gb|EFE44267.1| hypothetical protein TRV_00953 [Trichophyton verrucosum HKI 0517]
Length = 571
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 10/105 (9%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S+ +P +I ++ N D G + VG+ILG+ G+N+ +
Sbjct: 467 SESQPLISRIDRFATSFVPEGTLLICHNFDSPGKIGVVGSILGKRGVNLNFMSVAPISKG 526
Query: 63 ----------EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D ++ V++ L +
Sbjct: 527 KKQQKEIDSSDEALMILGVDRTVDECVVKALVNEGGVLSASVVSL 571
>gi|254508764|ref|ZP_05120877.1| chain A, D-3-Phosphoglycerate Dehydrogenase [Vibrio
parahaemolyticus 16]
gi|219548343|gb|EED25355.1| chain A, D-3-Phosphoglycerate Dehydrogenase [Vibrio
parahaemolyticus 16]
Length = 409
Score = 77.8 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I E GINIA +L + + +
Sbjct: 325 VNFPEVSLPEHRDCSRLLHIHKNRPGILTQINTIFAEEGINIAGQYLQTAADIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ L KL +
Sbjct: 383 DVEAGRSEEALAKLKNIEGTIRARILH 409
>gi|325284037|ref|YP_004256578.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Deinococcus proteolyticus MRP]
gi|324315846|gb|ADY26961.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Deinococcus proteolyticus MRP]
Length = 222
Score = 77.4 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 1/93 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I ++ G + + D GI+ + + INIA R +
Sbjct: 123 GGGVIVVSSINGSAVNISAGYPTLVLQYEDRPGILARITTAIAAEEINIATLSCTRDRRG 182
Query: 63 EHAISFLCIDGS-ILNSVLEKLSVNVTIRFVKQ 94
A+ + +DG + V+E ++++V+
Sbjct: 183 GSALVAIEMDGPGVHPGVIETFLRYPSMQWVQL 215
>gi|295105824|emb|CBL03367.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Gordonibacter pamelaeae 7-10-1-b]
Length = 388
Score = 77.4 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ + +++ +I ++ + ++ GE G+NI + + A +
Sbjct: 303 VNFPACDMGACPAGMSRAAVMHENIPSMISRITDVFGEEGVNIENMT--NKSRGDAAYTM 360
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
L +D + + +EKL +R V+
Sbjct: 361 LDLDQPVPATAVEKLEALEGVRRVRVV 387
>gi|262368138|pdb|3K5P|A Chain A, Crystal Structure Of Amino Acid-Binding Act: D-Isomer
Specific 2-Hydroxyacid Dehydrogenase Catalytic Domain
From Brucella Melitensis
Length = 416
Score = 77.4 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + GI+ + N+ + INIA L + +
Sbjct: 330 VNFPQVQLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 389
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G ++VL+++ +
Sbjct: 390 DGVGEASDAVLQEIREIPGTIRARLL 415
>gi|225570484|ref|ZP_03779509.1| hypothetical protein CLOHYLEM_06585 [Clostridium hylemonae DSM
15053]
gi|225160681|gb|EEG73300.1| hypothetical protein CLOHYLEM_06585 [Clostridium hylemonae DSM
15053]
Length = 389
Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + I +++ +I ++ +L E +NIA L E A + +
Sbjct: 305 VNFPDCDMGYKGSNTRIVLLHHNIPNMLGQFTKVLAEDNLNIAD--LANKSKGEFAYTMI 362
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
ID + V E+L +R V+ E
Sbjct: 363 DIDSEVPAGVTEELMKIEGVRRVRIIE 389
>gi|260775226|ref|ZP_05884124.1| D-3-phosphoglycerate dehydrogenase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608927|gb|EEX35089.1| D-3-phosphoglycerate dehydrogenase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 409
Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I E GINIA +L S + +
Sbjct: 325 VNFPEVSLPEHRDCSRLLHIHKNRPGILTQINTIFAEEGINIAGQYLQTSADIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ S L+KL +
Sbjct: 383 DVETSRSEEALKKLKGIEGTLRARILH 409
>gi|15642477|ref|NP_232110.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121590757|ref|ZP_01678087.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae 2740-80]
gi|121729024|ref|ZP_01682026.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae V52]
gi|147673205|ref|YP_001217981.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae O395]
gi|153819339|ref|ZP_01972006.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae NCTC 8457]
gi|153822868|ref|ZP_01975535.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae B33]
gi|227082601|ref|YP_002811152.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae M66-2]
gi|229507461|ref|ZP_04396966.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae BX 330286]
gi|229512344|ref|ZP_04401823.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae B33]
gi|229519480|ref|ZP_04408923.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae RC9]
gi|229606966|ref|YP_002877614.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae MJ-1236]
gi|254849605|ref|ZP_05238955.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae MO10]
gi|255746850|ref|ZP_05420795.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholera CIRS 101]
gi|262162015|ref|ZP_06031031.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae INDRE 91/1]
gi|262167310|ref|ZP_06035020.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae RC27]
gi|298500164|ref|ZP_07009969.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae MAK 757]
gi|9657060|gb|AAF95623.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121547398|gb|EAX57511.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae 2740-80]
gi|121628706|gb|EAX61176.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae V52]
gi|126510120|gb|EAZ72714.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae NCTC 8457]
gi|126519605|gb|EAZ76828.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae B33]
gi|146315088|gb|ABQ19627.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae O395]
gi|227010489|gb|ACP06701.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae M66-2]
gi|227014372|gb|ACP10582.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae O395]
gi|229344169|gb|EEO09144.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae RC9]
gi|229352309|gb|EEO17250.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae B33]
gi|229354966|gb|EEO19887.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae BX 330286]
gi|229369621|gb|ACQ60044.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae MJ-1236]
gi|254845310|gb|EET23724.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae MO10]
gi|255735252|gb|EET90652.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholera CIRS 101]
gi|262024285|gb|EEY42976.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae RC27]
gi|262028264|gb|EEY46921.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae INDRE 91/1]
gi|297540857|gb|EFH76911.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae MAK 757]
Length = 409
Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++A+ GI+ + I E GINIA +L + + +
Sbjct: 325 VNFPEVSLPEHRSCSRLLHIHANRPGILTQINTIFAEEGINIAAQYLQTTAEIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + L KL +
Sbjct: 383 DVETARSEEALTKLKAIDGTIRARILH 409
>gi|17989158|ref|NP_541791.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 1 str.
16M]
gi|256043350|ref|ZP_05446285.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 1 str.
Rev.1]
gi|256111643|ref|ZP_05452633.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 3 str.
Ether]
gi|260564556|ref|ZP_05835041.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 1 str.
16M]
gi|265989772|ref|ZP_06102329.1| D-isomer specific 2-hydroxyacid dehydrogenase [Brucella melitensis
bv. 1 str. Rev.1]
gi|265993120|ref|ZP_06105677.1| D-isomer specific 2-hydroxyacid dehydrogenase [Brucella melitensis
bv. 3 str. Ether]
gi|17985010|gb|AAL54055.1| d-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 1 str.
16M]
gi|260152199|gb|EEW87292.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis bv. 1 str.
16M]
gi|262763990|gb|EEZ10022.1| D-isomer specific 2-hydroxyacid dehydrogenase [Brucella melitensis
bv. 3 str. Ether]
gi|263000441|gb|EEZ13131.1| D-isomer specific 2-hydroxyacid dehydrogenase [Brucella melitensis
bv. 1 str. Rev.1]
Length = 412
Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + GI+ + N+ + INIA L + +
Sbjct: 326 VNFPQVQLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G ++VL+++ +
Sbjct: 386 DGVGEASDAVLQEIREIPGTIRARLL 411
>gi|153214529|ref|ZP_01949438.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae 1587]
gi|153802836|ref|ZP_01957422.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae MZO-3]
gi|153826979|ref|ZP_01979646.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae MZO-2]
gi|153830472|ref|ZP_01983139.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae 623-39]
gi|229514105|ref|ZP_04403567.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae TMA 21]
gi|229521306|ref|ZP_04410726.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae TM 11079-80]
gi|229527087|ref|ZP_04416482.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae 12129(1)]
gi|254226259|ref|ZP_04919852.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae V51]
gi|254292114|ref|ZP_04962888.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae AM-19226]
gi|262192694|ref|ZP_06050834.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae CT 5369-93]
gi|297581104|ref|ZP_06943029.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae RC385]
gi|124115331|gb|EAY34151.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae 1587]
gi|124121625|gb|EAY40368.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae MZO-3]
gi|125621232|gb|EAZ49573.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae V51]
gi|148874038|gb|EDL72173.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae 623-39]
gi|149739177|gb|EDM53459.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae MZO-2]
gi|150421982|gb|EDN13955.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae AM-19226]
gi|229335484|gb|EEO00966.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae 12129(1)]
gi|229341838|gb|EEO06840.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae TM 11079-80]
gi|229349286|gb|EEO14243.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae TMA 21]
gi|262031433|gb|EEY50031.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae CT 5369-93]
gi|297534930|gb|EFH73766.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae RC385]
gi|327484971|gb|AEA79378.1| D-3-phosphoglycerate dehydrogenase [Vibrio cholerae LMA3894-4]
Length = 409
Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++A+ GI+ + I E GINIA +L + + +
Sbjct: 325 VNFPEVSLPEHRSCSRLLHIHANRPGILTQINTIFAEEGINIAAQYLQTTAEIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + L KL +
Sbjct: 383 DVETARSEEALTKLKAIDGTIRARILH 409
>gi|256015236|ref|YP_003105245.1| D-3-phosphoglycerate dehydrogenase [Brucella microti CCM 4915]
gi|255997896|gb|ACU49583.1| D-3-phosphoglycerate dehydrogenase [Brucella microti CCM 4915]
Length = 412
Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + GI+ + N+ + INIA L + +
Sbjct: 326 VNFPQVQLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G ++VL+++ +
Sbjct: 386 DGVGEASDAVLQEIREIPGTIRARLL 411
>gi|254712280|ref|ZP_05174091.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti M644/93/1]
gi|254715351|ref|ZP_05177162.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti M13/05/1]
gi|261217079|ref|ZP_05931360.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella ceti M13/05/1]
gi|261319949|ref|ZP_05959146.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella ceti M644/93/1]
gi|260922168|gb|EEX88736.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella ceti M13/05/1]
gi|261292639|gb|EEX96135.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella ceti M644/93/1]
Length = 412
Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + GI+ + N+ + INIA L + +
Sbjct: 326 VNFPQVQLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G ++VL+++ +
Sbjct: 386 DGVGEASDAVLQEIREIPGTIRARLL 411
>gi|294853734|ref|ZP_06794406.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. NVSL 07-0026]
gi|294819389|gb|EFG36389.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. NVSL 07-0026]
Length = 412
Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + GI+ + N+ + INIA L + +
Sbjct: 326 VNFPQVQLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G ++VL+++ +
Sbjct: 386 DGVGEASDAVLQEIREIPGTIRARLL 411
>gi|163844619|ref|YP_001622274.1| D-3-phosphoglycerate dehydrogenase [Brucella suis ATCC 23445]
gi|163675342|gb|ABY39452.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 412
Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + GI+ + N+ + INIA L + +
Sbjct: 326 VNFPQVQLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G ++VL+++ +
Sbjct: 386 DGVGEASDAVLQEIREIPGTIRARLL 411
>gi|114775665|ref|ZP_01451233.1| Phosphoglycerate dehydrogenase and related dehydrogenase
[Mariprofundus ferrooxydans PV-1]
gi|114553776|gb|EAU56157.1| Phosphoglycerate dehydrogenase and related dehydrogenase
[Mariprofundus ferrooxydans PV-1]
Length = 529
Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 47/93 (50%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+F + + R + + +V +I + N D G++ +G IL INI F LGR +
Sbjct: 430 LFDEKRARLVSFDTCDVEVAPAGNLIFLQNEDRPGVIAAIGAILAAANINIGDFRLGRRE 489
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVK 93
T +A++ + +D + +VL +L+ + V+
Sbjct: 490 DTSNAVALIQVDTAPDETVLAELAKLPNVLMVR 522
>gi|23500202|ref|NP_699642.1| D-3-phosphoglycerate dehydrogenase [Brucella suis 1330]
gi|62317678|ref|YP_223531.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 1 str.
9-941]
gi|83269661|ref|YP_418952.1| D-3-phosphoglycerate dehydrogenase [Brucella melitensis biovar
Abortus 2308]
gi|161620521|ref|YP_001594407.1| D-3-phosphoglycerate dehydrogenase [Brucella canis ATCC 23365]
gi|189022927|ref|YP_001932668.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus S19]
gi|225628892|ref|ZP_03786926.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti str. Cudo]
gi|237817223|ref|ZP_04596215.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus str. 2308 A]
gi|254698958|ref|ZP_05160786.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 2 str.
86/8/59]
gi|254702845|ref|ZP_05164673.1| D-3-phosphoglycerate dehydrogenase [Brucella suis bv. 3 str. 686]
gi|254706034|ref|ZP_05167862.1| D-3-phosphoglycerate dehydrogenase [Brucella pinnipedialis
M163/99/10]
gi|254711666|ref|ZP_05173477.1| D-3-phosphoglycerate dehydrogenase [Brucella pinnipedialis B2/94]
gi|254720524|ref|ZP_05182335.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. 83/13]
gi|254732405|ref|ZP_05190983.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 4 str.
292]
gi|256029700|ref|ZP_05443314.1| D-3-phosphoglycerate dehydrogenase [Brucella pinnipedialis
M292/94/1]
gi|256059335|ref|ZP_05449537.1| D-3-phosphoglycerate dehydrogenase [Brucella neotomae 5K33]
gi|256157853|ref|ZP_05455771.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti M490/95/1]
gi|256253185|ref|ZP_05458721.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti B1/94]
gi|260167210|ref|ZP_05754021.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. F5/99]
gi|260544912|ref|ZP_05820733.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus NCTC 8038]
gi|260568244|ref|ZP_05838713.1| D-3-phosphoglycerate dehydrogenase [Brucella suis bv. 4 str. 40]
gi|260760207|ref|ZP_05872555.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella abortus bv. 4 str. 292]
gi|260763445|ref|ZP_05875777.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella abortus bv. 2 str. 86/8/59]
gi|261220292|ref|ZP_05934573.1| D-isomer specific 2-hydroxyacid dehydrogenase [Brucella ceti B1/94]
gi|261313475|ref|ZP_05952672.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella pinnipedialis M163/99/10]
gi|261319289|ref|ZP_05958486.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella pinnipedialis B2/94]
gi|261323294|ref|ZP_05962491.1| D-isomer specific 2-hydroxyacid dehydrogenase [Brucella neotomae
5K33]
gi|261753445|ref|ZP_05997154.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella suis bv. 3 str. 686]
gi|261756614|ref|ZP_06000323.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. F5/99]
gi|265985556|ref|ZP_06098291.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella sp. 83/13]
gi|265986711|ref|ZP_06099268.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella pinnipedialis M292/94/1]
gi|265996361|ref|ZP_06108918.1| D-isomer specific 2-hydroxyacid dehydrogenase [Brucella ceti
M490/95/1]
gi|306838108|ref|ZP_07470965.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. NF 2653]
gi|23463804|gb|AAN33647.1| D-3-phosphoglycerate dehydrogenase [Brucella suis 1330]
gi|62197871|gb|AAX76170.1| SerA-2, D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 1
str. 9-941]
gi|82939935|emb|CAJ12949.1| Amino acid-binding ACT:D-isomer specific 2-hydroxyacid
dehydrogenase, catalytic domain:D-isomer specific
2-hydroxyacid dehydr [Brucella melitensis biovar Abortus
2308]
gi|161337332|gb|ABX63636.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Brucella
canis ATCC 23365]
gi|189021501|gb|ACD74222.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus S19]
gi|225616738|gb|EEH13786.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti str. Cudo]
gi|237788036|gb|EEP62252.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus str. 2308 A]
gi|260098183|gb|EEW82057.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus NCTC 8038]
gi|260154909|gb|EEW89990.1| D-3-phosphoglycerate dehydrogenase [Brucella suis bv. 4 str. 40]
gi|260670525|gb|EEX57465.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella abortus bv. 4 str. 292]
gi|260673866|gb|EEX60687.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella abortus bv. 2 str. 86/8/59]
gi|260918876|gb|EEX85529.1| D-isomer specific 2-hydroxyacid dehydrogenase [Brucella ceti B1/94]
gi|261298512|gb|EEY02009.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella pinnipedialis B2/94]
gi|261299274|gb|EEY02771.1| D-isomer specific 2-hydroxyacid dehydrogenase [Brucella neotomae
5K33]
gi|261302501|gb|EEY05998.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella pinnipedialis M163/99/10]
gi|261736598|gb|EEY24594.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. F5/99]
gi|261743198|gb|EEY31124.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella suis bv. 3 str. 686]
gi|262550658|gb|EEZ06819.1| D-isomer specific 2-hydroxyacid dehydrogenase [Brucella ceti
M490/95/1]
gi|264658908|gb|EEZ29169.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella pinnipedialis M292/94/1]
gi|264664148|gb|EEZ34409.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella sp. 83/13]
gi|306406845|gb|EFM63067.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. NF 2653]
Length = 412
Score = 77.4 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + GI+ + N+ + INIA L + +
Sbjct: 326 VNFPQVQLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G ++VL+++ +
Sbjct: 386 DGVGEASDAVLQEIREIPGTIRARLL 411
>gi|261253919|ref|ZP_05946492.1| D-3-phosphoglycerate dehydrogenase [Vibrio orientalis CIP 102891]
gi|260937310|gb|EEX93299.1| D-3-phosphoglycerate dehydrogenase [Vibrio orientalis CIP 102891]
Length = 409
Score = 77.4 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I E GINIA +L + + +
Sbjct: 325 VNFPEVSLPEHRDCSRLLHIHQNRPGILTQINTIFAEEGINIAGQYLQTAA--DFGYVVI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ L KL +
Sbjct: 383 DVETERSEEALAKLKSIEGTIRARILH 409
>gi|300933674|ref|ZP_07148930.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium resistens DSM
45100]
Length = 530
Score = 77.4 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I + D+ + +V D G + VG+ LG+ GINI L + + A
Sbjct: 441 KIVRINDRGLDLRATGSNMFLVYLDQPGALGKVGSALGDAGINIDAAALSPNDGADTATL 500
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D + +LE + +++ Q +F
Sbjct: 501 VLRVDREVPADLLENIKEDLSTTAAFQLDF 530
>gi|254695521|ref|ZP_05157349.1| D-3-phosphoglycerate dehydrogenase [Brucella abortus bv. 3 str.
Tulya]
gi|261215911|ref|ZP_05930192.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella abortus bv. 3 str. Tulya]
gi|260917518|gb|EEX84379.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella abortus bv. 3 str. Tulya]
Length = 412
Score = 77.4 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + GI+ + N+ + INIA L + +
Sbjct: 326 VNFPQVQLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G ++VL+++ +
Sbjct: 386 DGVGEASDAVLQEIREIPGTIRARLL 411
>gi|121608286|ref|YP_996093.1| D-isomer specific 2-hydroxyacid dehydrogenase [Verminephrobacter
eiseniae EF01-2]
gi|121552926|gb|ABM57075.1| D-3-phosphoglycerate dehydrogenase [Verminephrobacter eiseniae
EF01-2]
Length = 409
Score = 77.4 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + V+ ++ G++ + I + INIA +L +++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHVHRNMPGVLSEINRIFSDTRINIAAQYLQTNETIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID + L++L+ +
Sbjct: 383 DIDAASSELALDRLAGVRGTLRCRVL 408
>gi|313674816|ref|YP_004052812.1| had-superfamily hydrolase, subfamily ib (pspase-like) [Marivirga
tractuosa DSM 4126]
gi|312941514|gb|ADR20704.1| HAD-superfamily hydrolase, subfamily IB (PSPase-like) [Marivirga
tractuosa DSM 4126]
Length = 628
Score = 77.0 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + ++ ++ GI+ + + ++ INIA +L ++ + I+
Sbjct: 544 VNFPNLTLPRLQNAHRLIHIHKNVPGIIAKINQLFAKHEINIAGQYLKTNEKIGYVIT-- 601
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID + ++++L +
Sbjct: 602 DIDKAYSKDLIKELRAIEHTIKFRVL 627
>gi|145298631|ref|YP_001141472.1| D-3-phosphoglycerate dehydrogenase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851403|gb|ABO89724.1| phosphoglycerate dehydrogenase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 410
Score = 77.0 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + G++ + I E GINIA +L S + +
Sbjct: 326 VNFPEVSLPGHKGSSRLLHIHRNQPGVMNKINQIFAEEGINIAGQYLQTSSHIGYV--VI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ L KL +
Sbjct: 384 DVETEHSEKALAKLKEINGTIRARILH 410
>gi|87121193|ref|ZP_01077084.1| D-3-phosphoglycerate dehydrogenase [Marinomonas sp. MED121]
gi|86163685|gb|EAQ64959.1| D-3-phosphoglycerate dehydrogenase [Marinomonas sp. MED121]
Length = 409
Score = 77.0 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G + ++ + GI+ + I + INI +L S++ +
Sbjct: 325 VNFPEVALPAQDGNHRLLHIHENRPGILTKINGIFSDNNINITGQYLRTSENIG--YMVM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + LEK+ +
Sbjct: 383 DVDAENSDLALEKVKEVEGTVRARIL 408
>gi|152971866|ref|YP_001336975.1| D-3-phosphoglycerate dehydrogenase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238896457|ref|YP_002921195.1| D-3-phosphoglycerate dehydrogenase [Klebsiella pneumoniae
NTUH-K2044]
gi|262042558|ref|ZP_06015715.1| D-3-phosphoglycerate dehydrogenase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330011880|ref|ZP_08307181.1| phosphoglycerate dehydrogenase [Klebsiella sp. MS 92-3]
gi|150956715|gb|ABR78745.1| D-3-phosphoglycerate dehydrogenase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238548777|dbj|BAH65128.1| D-3-phosphoglycerate dehydrogenase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259040118|gb|EEW41232.1| D-3-phosphoglycerate dehydrogenase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534059|gb|EGF60706.1| phosphoglycerate dehydrogenase [Klebsiella sp. MS 92-3]
Length = 410
Score = 77.0 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I INIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLLHIHENRPGVLTAINQIFAAQSINIAAQYLQTSPQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + L+ + +
Sbjct: 384 EAEEDVAQQALQAMKAIPGTIRARLL 409
>gi|306845816|ref|ZP_07478384.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. BO1]
gi|306273708|gb|EFM55546.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. BO1]
Length = 412
Score = 77.0 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 28/86 (32%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + GI+ + + + INIA L + +
Sbjct: 326 VNFPQVQLPPRPTGTRFMHVHENRPGILNSLMKVFSHHHINIASQFLQTDGEVGYLVMEA 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G ++VL+++ +
Sbjct: 386 DGVGEASDAVLQEIREIPGTIRARLL 411
>gi|61679883|pdb|1SC6|A Chain A, Crystal Structure Of W139g D-3-Phosphoglycerate
Dehydrogenase Complexed With Nad+
gi|61679884|pdb|1SC6|B Chain B, Crystal Structure Of W139g D-3-Phosphoglycerate
Dehydrogenase Complexed With Nad+
gi|61679885|pdb|1SC6|C Chain C, Crystal Structure Of W139g D-3-Phosphoglycerate
Dehydrogenase Complexed With Nad+
gi|61679886|pdb|1SC6|D Chain D, Crystal Structure Of W139g D-3-Phosphoglycerate
Dehydrogenase Complexed With Nad+
Length = 404
Score = 77.0 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 319 VNFPEVSLPLHG-GRRLXHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQXGYVVIDI 377
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ +
Sbjct: 378 EADEDVAEKALQAXKAIPGTIRARLL 403
>gi|254699709|ref|ZP_05161537.1| D-3-phosphoglycerate dehydrogenase [Brucella suis bv. 5 str. 513]
gi|261750173|ref|ZP_05993882.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella suis bv. 5 str. 513]
gi|261739926|gb|EEY27852.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Brucella suis bv. 5 str. 513]
Length = 412
Score = 77.0 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + GI+ + N+ + INIA L + +
Sbjct: 326 VNFPQVQLPPRPTGTRFMHVHENRPGILNSLMNVFSRHHINIASQFLQTDGEVGYLVMEA 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G ++VL+++ +
Sbjct: 386 DGVGEASDAVLQEIREIPGTIRARLL 411
>gi|295394378|ref|ZP_06804602.1| phosphoglycerate dehydrogenase [Brevibacterium mcbrellneri ATCC
49030]
gi|294972730|gb|EFG48581.1| phosphoglycerate dehydrogenase [Brevibacterium mcbrellneri ATCC
49030]
Length = 527
Score = 77.0 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ +I + ++ + ++ D G++ G LG INI + + +
Sbjct: 433 KDVQKLTEIDGYDLEMKLSDHLVFFKYDDRPGVIGLFGQALGNLDINIEAMQVSPNN--D 490
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
A++ L +D + V+ ++ + F + +
Sbjct: 491 QALAVLAVDSEVSAEVVNTVASEIGASFARVANIEEE 527
>gi|206578579|ref|YP_002236625.1| phosphoglycerate dehydrogenase [Klebsiella pneumoniae 342]
gi|288933603|ref|YP_003437662.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Klebsiella variicola At-22]
gi|290511331|ref|ZP_06550700.1| D-3-phosphoglycerate dehydrogenase [Klebsiella sp. 1_1_55]
gi|206567637|gb|ACI09413.1| phosphoglycerate dehydrogenase [Klebsiella pneumoniae 342]
gi|288888332|gb|ADC56650.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Klebsiella variicola At-22]
gi|289776324|gb|EFD84323.1| D-3-phosphoglycerate dehydrogenase [Klebsiella sp. 1_1_55]
Length = 410
Score = 77.0 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I INIA +L S + + +
Sbjct: 325 VNFPEVSLPLHG-GRRLLHIHENRPGVLTAINQIFAAQSINIAAQYLQTSPQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + L+ + +
Sbjct: 384 EAEEDVAQQALQAMKAIPGTIRARLL 409
>gi|257069029|ref|YP_003155284.1| D-3-phosphoglycerate dehydrogenase [Brachybacterium faecium DSM
4810]
gi|256559847|gb|ACU85694.1| D-3-phosphoglycerate dehydrogenase [Brachybacterium faecium DSM
4810]
Length = 535
Score = 77.0 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR--SQS 61
D + + ++ DV + ++ I D G++ G LGE G+NIA + R S
Sbjct: 438 DQEHKLTEVFGHALDVPLSDHLLIIRYEDGPGLIGQYGLRLGEAGVNIAGMQVSRAGSAR 497
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +D S+ E+L + R + +
Sbjct: 498 GAEALVVLDLDESVDRDFAEELGAAIDARSIDAVDL 533
>gi|330829106|ref|YP_004392058.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Aeromonas veronii B565]
gi|328804242|gb|AEB49441.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Aeromonas veronii B565]
Length = 410
Score = 77.0 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + G++ + I E GINIA +L S + +
Sbjct: 326 VNFPEVSLPGHKGSSRLLHIHRNQPGVMNQINQIFAEEGINIAGQYLQTSSHIGYV--VI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ L KL +
Sbjct: 384 DVETEHSEKALAKLKEINGTIRARILH 410
>gi|153816176|ref|ZP_01968844.1| hypothetical protein RUMTOR_02424 [Ruminococcus torques ATCC 27756]
gi|317500497|ref|ZP_07958720.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Lachnospiraceae bacterium 8_1_57FAA]
gi|331089404|ref|ZP_08338303.1| hypothetical protein HMPREF1025_01886 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145846511|gb|EDK23429.1| hypothetical protein RUMTOR_02424 [Ruminococcus torques ATCC 27756]
gi|316898086|gb|EFV20134.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Lachnospiraceae bacterium 8_1_57FAA]
gi|330404772|gb|EGG84310.1| hypothetical protein HMPREF1025_01886 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 387
Score = 77.0 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + I I++ +I ++ +L E +NI
Sbjct: 296 NGNITHSVNFPDCDMGAKGEGERITILHKNIPNMIGQFTALLAEKNMNIEVMT--NKSRK 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E+A + L +DG++ V +L+ + V+
Sbjct: 354 EYAYTMLDVDGTVSEDVEAQLAAVEGVLKVRVIR 387
>gi|120403120|ref|YP_952949.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium vanbaalenii
PYR-1]
gi|119955938|gb|ABM12943.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium vanbaalenii
PYR-1]
Length = 528
Score = 77.0 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 5/92 (5%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I N ++ + + I D G + +G +LG +NI L + A
Sbjct: 438 KIVQINGRNLELRAEGVNLIINYDDQPGALGKIGTLLGGAAVNILAAQLSQDADGIGATV 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
L +D + VL + R V V
Sbjct: 498 MLRLDREVPGEVLAAIG-----RDVNAVTLEV 524
>gi|260771294|ref|ZP_05880221.1| D-3-phosphoglycerate dehydrogenase [Vibrio furnissii CIP 102972]
gi|260613891|gb|EEX39083.1| D-3-phosphoglycerate dehydrogenase [Vibrio furnissii CIP 102972]
gi|315179099|gb|ADT86013.1| D-3-phosphoglycerate dehydrogenase [Vibrio furnissii NCTC 11218]
Length = 409
Score = 77.0 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I + GINIA +L S + + +
Sbjct: 325 VNFPEVSLPEHRQASRLLHIHENRPGILTQINTIFAQDGINIAAQYLQTSANIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + L KL +
Sbjct: 383 DVENARSEEALAKLKGIDGTIRARILH 409
>gi|256823693|ref|YP_003147656.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Kangiella koreensis DSM 16069]
gi|256797232|gb|ACV27888.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Kangiella koreensis DSM 16069]
Length = 409
Score = 77.0 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + + ++ + GI+ + IL + INI+ +L +
Sbjct: 325 VNFPQVALPEHVNTHRVLHIHHNKPGILSQINQILSQNDINISAQYLQTQ--GDIGYVVT 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID LEK+ +
Sbjct: 383 DIDKGSSQIALEKMREIEGTIRARVL 408
>gi|306840630|ref|ZP_07473382.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. BO2]
gi|306289368|gb|EFM60604.1| D-3-phosphoglycerate dehydrogenase [Brucella sp. BO2]
Length = 370
Score = 76.6 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + GI+ + N+ + INIA L + +
Sbjct: 284 VNFPQVQLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 343
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G ++VL+++ +
Sbjct: 344 DGVGEASDAVLQEIREIPGTIRARLL 369
>gi|309812656|ref|ZP_07706400.1| putative phosphoglycerate dehydrogenase [Dermacoccus sp. Ellin185]
gi|308433351|gb|EFP57239.1| putative phosphoglycerate dehydrogenase [Dermacoccus sp. Ellin185]
Length = 427
Score = 76.6 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + +N G+ I + ++ G + + IL E+G+NI L + T +
Sbjct: 343 VNLPSLNLPERPGQHRIVHFHKNVPGALARMNGILAEHGVNIEGQMLDTAADTGYV--VT 400
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ + ++VL++L ++
Sbjct: 401 DVVSQLPDAVLDQLRAMPETIRLRVVR 427
>gi|126434478|ref|YP_001070169.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium sp. JLS]
gi|126234278|gb|ABN97678.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium sp. JLS]
Length = 528
Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I NFD+ + + + D G + +G +LG +NI L A
Sbjct: 438 KIVQINGRNFDLRAEGVNLIVNYIDQPGALGKIGTLLGTAEVNIHAAQLSEDAEGPGATI 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
L +D + + L+ K E
Sbjct: 498 LLRLDRDVPAELRSALAE---AVDAKTLE 523
>gi|270264940|ref|ZP_06193204.1| hypothetical protein SOD_j01560 [Serratia odorifera 4Rx13]
gi|270041238|gb|EFA14338.1| hypothetical protein SOD_j01560 [Serratia odorifera 4Rx13]
Length = 412
Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 32/87 (36%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + G++ + I E G+NIA +L + +
Sbjct: 325 VNFPEVSLPAHGPNASRLLHIHENRPGVLTQINQIFAEEGVNIAAQYLQTGPEIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ++ L+++ +
Sbjct: 385 IEAETERADAALQRMKAIAGTIRARLL 411
>gi|59712713|ref|YP_205489.1| D-3-phosphoglycerate dehydrogenase [Vibrio fischeri ES114]
gi|59480814|gb|AAW86601.1| D-3-phosphoglycerate dehydrogenase [Vibrio fischeri ES114]
Length = 409
Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + +I GINIA +L S + +
Sbjct: 325 VNFPEVSLPEHTDTSRLLHIHENRPGILTQINSIFANEGINIAAQYLQTSADMGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + L +L +
Sbjct: 383 DVETARAEEALVQLKAIEGTIRARILH 409
>gi|319943533|ref|ZP_08017815.1| D-3-phosphoglycerate dehydrogenase [Lautropia mirabilis ATCC 51599]
gi|319743348|gb|EFV95753.1| D-3-phosphoglycerate dehydrogenase [Lautropia mirabilis ATCC 51599]
Length = 427
Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G I ++ ++ G++ + L GINIA +L +Q + +
Sbjct: 343 VNFPEVSLPAHPGLCRILHIHRNVPGMLTRINERLSNAGINIASQYLQTNQHVGYV--VV 400
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ L ++S +
Sbjct: 401 DVENEGSAEALHEISDLEGTIRARVL 426
>gi|315127459|ref|YP_004069462.1| D-3-phosphoglycerate dehydrogenase [Pseudoalteromonas sp. SM9913]
gi|315015973|gb|ADT69311.1| D-3-phosphoglycerate dehydrogenase [Pseudoalteromonas sp. SM9913]
Length = 409
Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ R + V+ + G++ + ++GINIA +L ++ + +
Sbjct: 325 VNFPEVSLPELANRSRLLHVHHNRPGVLTQINQAFAQHGINIAAQYLQTDEAIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D L++LS +
Sbjct: 383 DVDTVQSEVALKELSAVEGTIRARILH 409
>gi|108798878|ref|YP_639075.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium sp. MCS]
gi|119867993|ref|YP_937945.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium sp. KMS]
gi|108769297|gb|ABG08019.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium sp. MCS]
gi|119694082|gb|ABL91155.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium sp. KMS]
Length = 528
Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I NFD+ + + + D G + +G +LG +NI L A
Sbjct: 438 KIVQINGRNFDLRAEGVNLIVNYIDQPGALGKIGTLLGTAEVNIHAAQLSEDAEGPGATI 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
L +D + + L+ K E
Sbjct: 498 LLRLDRDVPAELRSALAE---AVDAKTLE 523
>gi|197335987|ref|YP_002156905.1| D-3-phosphoglycerate dehydrogenase [Vibrio fischeri MJ11]
gi|197317477|gb|ACH66924.1| D-3-phosphoglycerate dehydrogenase [Vibrio fischeri MJ11]
Length = 409
Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + +I GINIA +L S + +
Sbjct: 325 VNFPEVSLPEHTDTSRLLHIHENRPGILTQINSIFANEGINIAAQYLQTSADMGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + L +L +
Sbjct: 383 DVETARAEEALVQLKAIEGTIRARILH 409
>gi|156975811|ref|YP_001446718.1| D-3-phosphoglycerate dehydrogenase [Vibrio harveyi ATCC BAA-1116]
gi|156527405|gb|ABU72491.1| hypothetical protein VIBHAR_03556 [Vibrio harveyi ATCC BAA-1116]
Length = 409
Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I E GINIA +L + + +
Sbjct: 325 VNFPEVSLPEHRECSRLLHIHKNRPGILTQINTIFAEEGINIAGQYLQTAAEIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ S L KL +
Sbjct: 383 DVETSRSEEALVKLKGIEGTIRARILH 409
>gi|329297003|ref|ZP_08254339.1| D-3-phosphoglycerate dehydrogenase [Plautia stali symbiont]
Length = 412
Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDV-DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + G++ + I E GINIA +L S + +
Sbjct: 325 VNFPEVSLPMHAASASRLLHIHENRPGVLTAINQIFAEQGINIAAQYLQTSPVMGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + L+ + +
Sbjct: 385 IDAEEDVAEKALQLMKAIPGTIRARLL 411
>gi|254515795|ref|ZP_05127855.1| chain A, D-3-Phosphoglycerate Dehydrogenase [gamma proteobacterium
NOR5-3]
gi|219675517|gb|EED31883.1| chain A, D-3-Phosphoglycerate Dehydrogenase [gamma proteobacterium
NOR5-3]
Length = 409
Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + E+ G + ++ ++ G++ + NI E G+NIA +L ++ + +
Sbjct: 325 VNMPEVALPEHDGCHRLLHIHRNVPGVMGAINNIFSEIGVNIAAQYLQTNEHVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID LEKL+ T +
Sbjct: 383 DIDAEYSEVALEKLTALETTLRCRVL 408
>gi|39971783|ref|XP_367282.1| hypothetical protein MGG_07207 [Magnaporthe oryzae 70-15]
gi|145019699|gb|EDK03927.1| hypothetical protein MGG_07207 [Magnaporthe oryzae 70-15]
Length = 586
Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 18/107 (16%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLG----- 57
S ++ N + +M+ + N D G + VG++LG + INI +
Sbjct: 468 SGQNVYISRLGRFNANFTPEGMMLILHNYDEPGKIGNVGSVLGRHSINIRFMQVAGLALH 527
Query: 58 ----------RSQSTE---HAISFLCIDGSILNSVLEKLSVNVTIRF 91
R + E A+ L +DG I VL LS I
Sbjct: 528 DQQKEQVSSNRDRVGEHENEALMILGVDGEITKEVLNDLSQAEGILN 574
>gi|22127177|ref|NP_670600.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis KIM 10]
gi|45443345|ref|NP_994884.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis biovar Microtus
str. 91001]
gi|21960241|gb|AAM86851.1|AE013931_4 D-3-phosphoglycerate dehydrogenase [Yersinia pestis KIM 10]
gi|45438214|gb|AAS63761.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis biovar Microtus
str. 91001]
Length = 447
Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGRLM-ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + GI+ + I E +NIA +L S + +
Sbjct: 359 VNFPEVSLPAHGDNTRRLLHIHENRPGILTSINTIFAEQNVNIAAQYLQTSADIGYVVID 418
Query: 69 LCIDG-SILNSVLEKLSVNVTIRFVKQF 95
+ D L+ + +
Sbjct: 419 VETDDADNAEKALQAMKAIPGTIRARLL 446
>gi|85711163|ref|ZP_01042223.1| D-3-phosphoglycerate dehydrogenase [Idiomarina baltica OS145]
gi|85695076|gb|EAQ33014.1| D-3-phosphoglycerate dehydrogenase [Idiomarina baltica OS145]
Length = 409
Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + G++ + +IL ++ IN+A +L ++ + +
Sbjct: 325 VNFPEVSLPQHATARRLLHIHKNQPGMMNAINSILSDFEINVAGQYLQTDENVGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID +L+K+ +Q
Sbjct: 383 DIDTDNGTELLDKMKAIPGTIRARQL 408
>gi|260771941|ref|ZP_05880859.1| D-3-phosphoglycerate dehydrogenase [Vibrio metschnikovii CIP 69.14]
gi|260613233|gb|EEX38434.1| D-3-phosphoglycerate dehydrogenase [Vibrio metschnikovii CIP 69.14]
Length = 409
Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I + GINIA +L S + + +
Sbjct: 325 VNFPEVSLPQHRDCSRLLHIHENRPGILTQINTIFAQDGINIAAQYLQTSANIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + L KL +
Sbjct: 383 DVETARSEEALIKLKAIDGTIRARILH 409
>gi|227832959|ref|YP_002834666.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium aurimucosum
ATCC 700975]
gi|262182554|ref|ZP_06041975.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium aurimucosum
ATCC 700975]
gi|227453975|gb|ACP32728.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium aurimucosum
ATCC 700975]
Length = 528
Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG + I+I D+ + D G + VG LG GINI L + +
Sbjct: 434 DGVEKIIRINGRGVDMRATGRNLFFSYKDAPGALGTVGTKLGAAGINIVAAALTQGKDAS 493
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A+ L ++ + ++++++ + +Q N
Sbjct: 494 DAVLILRVEREVPEELVDEINAALGAT-CRQLVLN 527
>gi|331005567|ref|ZP_08328939.1| D-3-phosphoglycerate dehydrogenase [gamma proteobacterium IMCC1989]
gi|330420617|gb|EGG94911.1| D-3-phosphoglycerate dehydrogenase [gamma proteobacterium IMCC1989]
Length = 409
Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 30/87 (34%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + + V+ +I G++ + + E INI +L + +
Sbjct: 325 VNFPEVALPSNPEAHRLLHVHKNIPGVLTEINRVFSENEINICGQYLQTNDKVGYV--VT 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ ++ L++L +
Sbjct: 383 EVGTDYSDAALQQLKNITGTIRCRVLH 409
>gi|291538170|emb|CBL11281.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Roseburia intestinalis XB6B4]
Length = 387
Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + I I++ ++ G++ ILG+ GINI
Sbjct: 296 NGNIVHSVNFPDCSMGACTTAGRIGILHRNVKGMLSLYTTILGDAGINIDGM--ANKSKG 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
++A + L +D S+ +VLEKL + V++
Sbjct: 354 DYAYALLDLDTSVPENVLEKLKNTEGVLKVRKI 386
>gi|282858223|ref|ZP_06267413.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Pyramidobacter piscolens W5455]
gi|282583954|gb|EFB89332.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Pyramidobacter piscolens W5455]
Length = 227
Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + V G+ ++ +++ D GIV + G+N+A + R
Sbjct: 125 GGGAVELRAVDGFPMVVPFGQPVLIVMHRDQPGIVSVITGEFYRLGLNVARMEMERRVRG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVN-VTIRFVKQFE 96
A+ +DG++ + E++ R V +
Sbjct: 185 GMAVFVFVLDGAVPADLGERIRTIVPACRRVILLK 219
>gi|171059691|ref|YP_001792040.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Leptothrix cholodnii SP-6]
gi|170777136|gb|ACB35275.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Leptothrix cholodnii SP-6]
Length = 402
Score = 76.2 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 33/93 (35%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ ++ + I NA++ ++ + + G+NI +
Sbjct: 301 HGNVANAVNFPSVSM-ARESAWRVAIANANVPNMLGQISTTMARAGLNIHNMV--NKSRG 357
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + + +D + VL +L+ + V+
Sbjct: 358 DVAYTLVDVDSPVSAQVLAELAAIAGVLAVRYL 390
>gi|240145034|ref|ZP_04743635.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Roseburia intestinalis L1-82]
gi|257202909|gb|EEV01194.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Roseburia intestinalis L1-82]
gi|291535359|emb|CBL08471.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Roseburia intestinalis M50/1]
Length = 387
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + I I++ ++ G++ ILG+ GINI
Sbjct: 296 NGNIVHSVNFPDCSMGACTTAGRIGILHRNVKGMLSLYTTILGDAGINIDGM--ANKSKG 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
++A + L +D S+ +VLEKL + V++
Sbjct: 354 DYAYALLDLDTSVPENVLEKLKNTEGVLKVRKI 386
>gi|189201403|ref|XP_001937038.1| D-3-phosphoglycerate dehydrogenase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984137|gb|EDU49625.1| D-3-phosphoglycerate dehydrogenase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 573
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 43/110 (39%), Gaps = 17/110 (15%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLG------- 57
+P ++ + + ++ N D +G + +VGN+LG+ G+NI ++
Sbjct: 464 NRPFISRLDKFKGEFVPRGTLLICRNFDSVGKIGYVGNVLGKAGVNIKFMNVAPLDEEVE 523
Query: 58 ------RSQSTE----HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
++ A+ L +DG + VL++L + F
Sbjct: 524 ERQNEQNGKNGGQGHKEALMILGVDGRVGEDVLKRLIGEEGVLEASVVNF 573
>gi|300856227|ref|YP_003781211.1| putative D-isomer specific 2-hydroxyacid dehydrogenase [Clostridium
ljungdahlii DSM 13528]
gi|300436342|gb|ADK16109.1| predicted D-isomer specific 2-hydroxyacid dehydrogenase
[Clostridium ljungdahlii DSM 13528]
Length = 388
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 16 NFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
N D++ + + N ++ +V V IL + INIA L S + A + + +DG+
Sbjct: 309 NCDLEYKGHIRLLVGNINVPNMVGQVTTILAQNEINIAS--LLNSHKGKIAYNIIDVDGN 366
Query: 75 ILNSVLEKLSVNVTIRFVKQFE 96
+ + VLEK+ + V+
Sbjct: 367 VTSEVLEKIKAIDGVVMVRIIR 388
>gi|308048407|ref|YP_003911973.1| D-3-phosphoglycerate dehydrogenase [Ferrimonas balearica DSM 9799]
gi|307630597|gb|ADN74899.1| D-3-phosphoglycerate dehydrogenase [Ferrimonas balearica DSM 9799]
Length = 409
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + V+ + GI++ + E GINI+ +L + + +
Sbjct: 325 VNFPEVSLPGHSGTSRLLHVHRNQPGILIQINQAFAEKGINISAQYLQTTPEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D + + LE++ +
Sbjct: 383 DVDTNQADQALEQMKNIPGTIRARLLH 409
>gi|51597499|ref|YP_071690.1| D-3-phosphoglycerate dehydrogenase [Yersinia pseudotuberculosis IP
32953]
gi|108806350|ref|YP_650266.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis Antiqua]
gi|108813273|ref|YP_649040.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis Nepal516]
gi|145597906|ref|YP_001161982.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis Pestoides F]
gi|149367076|ref|ZP_01889109.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis CA88-4125]
gi|153949738|ref|YP_001399840.1| D-3-phosphoglycerate dehydrogenase [Yersinia pseudotuberculosis IP
31758]
gi|162418470|ref|YP_001608132.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis Angola]
gi|165925145|ref|ZP_02220977.1| phosphoglycerate dehydrogenase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165937338|ref|ZP_02225902.1| phosphoglycerate dehydrogenase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166010298|ref|ZP_02231196.1| phosphoglycerate dehydrogenase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212868|ref|ZP_02238903.1| phosphoglycerate dehydrogenase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399894|ref|ZP_02305412.1| phosphoglycerate dehydrogenase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419033|ref|ZP_02310786.1| phosphoglycerate dehydrogenase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167425272|ref|ZP_02317025.1| phosphoglycerate dehydrogenase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|170023108|ref|YP_001719613.1| D-3-phosphoglycerate dehydrogenase [Yersinia pseudotuberculosis
YPIII]
gi|186896621|ref|YP_001873733.1| D-3-phosphoglycerate dehydrogenase [Yersinia pseudotuberculosis
PB1/+]
gi|218928087|ref|YP_002345962.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis CO92]
gi|229837603|ref|ZP_04457765.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis Pestoides A]
gi|229840827|ref|ZP_04460986.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842613|ref|ZP_04462768.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229903731|ref|ZP_04518844.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis Nepal516]
gi|270487513|ref|ZP_06204587.1| phosphoglycerate dehydrogenase [Yersinia pestis KIM D27]
gi|294502920|ref|YP_003566982.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis Z176003]
gi|51590781|emb|CAH22427.1| D-3-phosphoglycerate dehydrogenase (PGDH) [Yersinia
pseudotuberculosis IP 32953]
gi|108776921|gb|ABG19440.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis Nepal516]
gi|108778263|gb|ABG12321.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis Antiqua]
gi|115346698|emb|CAL19581.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis CO92]
gi|145209602|gb|ABP39009.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis Pestoides F]
gi|149290690|gb|EDM40766.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis CA88-4125]
gi|152961233|gb|ABS48694.1| phosphoglycerate dehydrogenase [Yersinia pseudotuberculosis IP
31758]
gi|162351285|gb|ABX85233.1| phosphoglycerate dehydrogenase [Yersinia pestis Angola]
gi|165914812|gb|EDR33425.1| phosphoglycerate dehydrogenase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165923345|gb|EDR40496.1| phosphoglycerate dehydrogenase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165990784|gb|EDR43085.1| phosphoglycerate dehydrogenase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206160|gb|EDR50640.1| phosphoglycerate dehydrogenase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166963027|gb|EDR59048.1| phosphoglycerate dehydrogenase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050602|gb|EDR62010.1| phosphoglycerate dehydrogenase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167055672|gb|EDR65456.1| phosphoglycerate dehydrogenase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169749642|gb|ACA67160.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Yersinia
pseudotuberculosis YPIII]
gi|186699647|gb|ACC90276.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Yersinia
pseudotuberculosis PB1/+]
gi|229679501|gb|EEO75604.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis Nepal516]
gi|229690923|gb|EEO82977.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697193|gb|EEO87240.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229704291|gb|EEO91302.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis Pestoides A]
gi|262360955|gb|ACY57676.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis D106004]
gi|262364895|gb|ACY61452.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis D182038]
gi|270336017|gb|EFA46794.1| phosphoglycerate dehydrogenase [Yersinia pestis KIM D27]
gi|294353379|gb|ADE63720.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis Z176003]
gi|320014006|gb|ADV97577.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 413
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGRLM-ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + GI+ + I E +NIA +L S + +
Sbjct: 325 VNFPEVSLPAHGDNTRRLLHIHENRPGILTSINTIFAEQNVNIAAQYLQTSADIGYVVID 384
Query: 69 LCIDG-SILNSVLEKLSVNVTIRFVKQF 95
+ D L+ + +
Sbjct: 385 VETDDADNAEKALQAMKAIPGTIRARLL 412
>gi|88810647|ref|ZP_01125904.1| D-isomer specific 2-hydroxyacid dehydrogenase [Nitrococcus mobilis
Nb-231]
gi|88792277|gb|EAR23387.1| D-isomer specific 2-hydroxyacid dehydrogenase [Nitrococcus mobilis
Nb-231]
Length = 389
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + EI + +VNA++ ++ + + E +NI + A +
Sbjct: 305 VNLPEIVLPRAGQGDRLTVVNANVPNMLGQISTAVAEASLNIEDMY--NKAKGNLAYTVA 362
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++G I V+E++ + V+ E
Sbjct: 363 DVEGKITAEVVERIRATEGVLAVRVIE 389
>gi|146387108|pdb|2P9G|A Chain A, Crystal Structure Of Serine Bound G336v,G337v Double
Mutant Of E.Coli Phosphoglycerate Dehydrogenase
gi|146387109|pdb|2P9G|B Chain B, Crystal Structure Of Serine Bound G336v,G337v Double
Mutant Of E.Coli Phosphoglycerate Dehydrogenase
Length = 410
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + R + ++ + G++ + I E G+NIA +L S + + +
Sbjct: 325 VNFPEVSLPLHVVR-RLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L+ + +
Sbjct: 384 EADEDVAEKALQAMKAIPGTIRARLL 409
>gi|88706366|ref|ZP_01104071.1| D-3-phosphoglycerate dehydrogenase [Congregibacter litoralis KT71]
gi|88699302|gb|EAQ96416.1| D-3-phosphoglycerate dehydrogenase [Congregibacter litoralis KT71]
Length = 409
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + E+ G + ++ ++ G++ + NI + G+NIA +L ++ + +
Sbjct: 325 VNMPEVALPEHDGSHRLLHIHRNVPGVMGAINNIFSDIGVNIAAQYLQTNEHVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID LE+L+ T +
Sbjct: 383 DIDAEYSEVALERLTALETTLRCRVL 408
>gi|254362642|ref|ZP_04978731.1| phosphoglycerate dehydrogenase [Mannheimia haemolytica PHL213]
gi|261492884|ref|ZP_05989430.1| phosphoglycerate dehydrogenase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496766|ref|ZP_05993141.1| phosphoglycerate dehydrogenase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|153094256|gb|EDN75127.1| phosphoglycerate dehydrogenase [Mannheimia haemolytica PHL213]
gi|261307605|gb|EEY08933.1| phosphoglycerate dehydrogenase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311425|gb|EEY12582.1| phosphoglycerate dehydrogenase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 409
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ + I E +NIA +L + + +
Sbjct: 325 VNFPEVSLPLHTNTKRLLHIHENRPGMLNQINQIFVESNVNIAAQYLQTDAAIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ ++ L++L +
Sbjct: 383 DVESDNVDEALQRLKAIEGTIRARVL 408
>gi|119776081|ref|YP_928821.1| D-3-phosphoglycerate dehydrogenase [Shewanella amazonensis SB2B]
gi|119768581|gb|ABM01152.1| D-3-phosphoglycerate dehydrogenase [Shewanella amazonensis SB2B]
Length = 409
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + G + ++ + GI++ + E GINI+ +L + + +
Sbjct: 325 VNFPEVSLPMHKGTSRLLHIHKNRPGILIKINQAFSEKGINISAQYLQTTADIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D LE+L +
Sbjct: 383 EVDTHQAEEALEQLRGIEGTIRTRLLH 409
>gi|293394577|ref|ZP_06638871.1| D-3-phosphoglycerate dehydrogenase [Serratia odorifera DSM 4582]
gi|291422886|gb|EFE96121.1| D-3-phosphoglycerate dehydrogenase [Serratia odorifera DSM 4582]
Length = 412
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 32/87 (36%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + G++ + I E G+NIA +L + +
Sbjct: 325 VNFPEVSLPAHGPSASRLLHIHQNRPGVLTQINQIFAEEGVNIAAQYLQTGPEIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ++ L+++ +
Sbjct: 385 VEAETERADAALQRMKAIQGTIRARLL 411
>gi|317049396|ref|YP_004117044.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Pantoea sp. At-9b]
gi|316951013|gb|ADU70488.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Pantoea sp. At-9b]
Length = 412
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDV-DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + G++ + I E GINIA +L S + +
Sbjct: 325 VNFPEVSLPMHAASASRLLHIHENRPGVLTAINQIFAEQGINIAAQYLQTSPLMGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + L+ + +
Sbjct: 385 IDAQQDVADKALQLMKAIPGTIRARLL 411
>gi|71278422|ref|YP_268286.1| D-3-phosphoglycerate dehydrogenase [Colwellia psychrerythraea 34H]
gi|71144162|gb|AAZ24635.1| D-3-phosphoglycerate dehydrogenase [Colwellia psychrerythraea 34H]
Length = 417
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + +F + ++ + G++ + E+ INIA +L + +
Sbjct: 333 VSLPDHSFPGQKNTSRLLHIHHNQPGVLTQINQAFAEHNINIAAQYLQTDDKIGYV--VI 390
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D + LE+L +
Sbjct: 391 DLDSEDSSLALEQLKHVDGTIRARILH 417
>gi|238787343|ref|ZP_04631142.1| D-3-phosphoglycerate dehydrogenase [Yersinia frederiksenii ATCC
33641]
gi|238724605|gb|EEQ16246.1| D-3-phosphoglycerate dehydrogenase [Yersinia frederiksenii ATCC
33641]
Length = 413
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGRLM-ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + GI+ + I E +NIA +L S + +
Sbjct: 325 VNFPEVSLPAHGDNTRRLLHIHENRPGILTSINKIFAEQNVNIAAQYLQTSAEIGYVVID 384
Query: 69 LCIDG-SILNSVLEKLSVNVTIRFVKQF 95
+ D L+ + +
Sbjct: 385 VETDDAENAEKALQAMKAIPGTIRARLL 412
>gi|269960423|ref|ZP_06174796.1| D-3-phosphoglycerate dehydrogenase [Vibrio harveyi 1DA3]
gi|269834850|gb|EEZ88936.1| D-3-phosphoglycerate dehydrogenase [Vibrio harveyi 1DA3]
Length = 424
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I E GINIA +L + + +
Sbjct: 340 VNFPEVSLPEHRECSRLLHIHKNRPGILTQINTIFAEDGINIAGQYLQTAAEIGYV--VI 397
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ S L KL +
Sbjct: 398 DVETSRAEEALVKLKGIEGTIRARILH 424
>gi|158424649|ref|YP_001525941.1| D-3-phosphoglycerate dehydrogenase [Azorhizobium caulinodans ORS
571]
gi|158331538|dbj|BAF89023.1| D-3-phosphoglycerate dehydrogenase [Azorhizobium caulinodans ORS
571]
Length = 438
Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 9/86 (10%), Positives = 26/86 (30%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V ++ G++ + +L + +NIA + + +
Sbjct: 348 VNFPQVQLPARPQGTRFIQVQRNLPGMLGRLNEVLARHSVNIAGQYYETYADVGYVVLDA 407
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ VLE + +
Sbjct: 408 DASQADSQRVLEDIRAIDGTIRARLL 433
>gi|41409131|ref|NP_961967.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41397951|gb|AAS05581.1| SerA [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 528
Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I NFD+ + + I D G + +G +LG G+NI L A
Sbjct: 438 KIVQINGRNFDLRARGINLVINYVDQPGALGKIGTLLGSAGVNIQAAQLSEDAEGPGATI 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D + V + V ++ +
Sbjct: 498 LLRLDQDVPADVRSAIGAAVGANKLEVVDL 527
>gi|325066354|ref|ZP_08125027.1| NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase protein
[Actinomyces oris K20]
Length = 396
Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E G + IVN ++ +V V I+ ++G NIA+ L E A++ +
Sbjct: 313 VNFPEAVMTRQEGTHRLVIVNRNVPNMVGQVSTIVAQHGQNIAN--LLNKSRGELAVTLV 370
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++G I VLE+L + +
Sbjct: 371 DVEGEIEPKVLEELRAIDGVLSARGI 396
>gi|238752294|ref|ZP_04613773.1| D-3-phosphoglycerate dehydrogenase [Yersinia rohdei ATCC 43380]
gi|238709455|gb|EEQ01694.1| D-3-phosphoglycerate dehydrogenase [Yersinia rohdei ATCC 43380]
Length = 413
Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGRLM-ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + GI+ + I E +NIA +L S + +
Sbjct: 325 VNFPEVSLPAHGDNTRRLLHIHENRPGILTSINKIFAEQNVNIAAQYLQTSAEIGYVVID 384
Query: 69 LCIDG-SILNSVLEKLSVNVTIRFVKQF 95
+ D L+ + +
Sbjct: 385 VETDDAENAEKALQAMKAIPGTIRARLL 412
>gi|284045014|ref|YP_003395354.1| D-3-phosphoglycerate dehydrogenase [Conexibacter woesei DSM 14684]
gi|283949235|gb|ADB51979.1| D-3-phosphoglycerate dehydrogenase [Conexibacter woesei DSM 14684]
Length = 541
Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRS----- 59
+P +++ FD+ + + D+ G++ VG++ GE GINI +GR
Sbjct: 443 NRPHLLEVWGQRFDLQLESHLALFCYRDVPGMIGRVGSVFGEKGINIVSAAVGREPGDDG 502
Query: 60 -QSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ +A+ + D + +V+E++ + +
Sbjct: 503 PTAGGNAVMAVTTDAPVPAAVIEEIVAGESFVAGRAVNL 541
>gi|118463523|ref|YP_883011.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium avium 104]
gi|254776268|ref|ZP_05217784.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118164810|gb|ABK65707.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium avium 104]
Length = 528
Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I NFD+ + + I D G + +G +LG G+NI L A
Sbjct: 438 KIVQINGRNFDLRARGINLVINYVDQPGALGKIGTLLGSAGVNIQAAQLSEDAEGPGATI 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D + V + V ++ +
Sbjct: 498 LLRLDQDVPADVRSAIGAAVGANKLEVVDL 527
>gi|170728216|ref|YP_001762242.1| D-3-phosphoglycerate dehydrogenase [Shewanella woodyi ATCC 51908]
gi|169813563|gb|ACA88147.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Shewanella woodyi ATCC 51908]
Length = 409
Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + G+++ + E GINIA +L + + +
Sbjct: 325 VNFPEVSLAQHKDASRLLHIHHNRPGVLIKINQAFAEKGINIAAQYLQTTAEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D + LE++ +
Sbjct: 383 EVDSDQADEALEQMKAIEGTIRTRLLH 409
>gi|311747005|ref|ZP_07720790.1| D-3-phosphoglycerate dehydrogenase [Algoriphagus sp. PR1]
gi|126578705|gb|EAZ82869.1| D-3-phosphoglycerate dehydrogenase [Algoriphagus sp. PR1]
Length = 630
Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 30/92 (32%), Gaps = 2/92 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ I + ++ + G++ + +L Y INI +L ++
Sbjct: 540 GNTYNSVNFPNIQLPFLNDAHRLIHIHLNEPGVLARINQVLANYEINIVGQYLKTNEKIG 599
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ I+ ID + ++ L +
Sbjct: 600 YVIT--DIDKAYSPDAIDALKNIPGTIRFRTL 629
>gi|238763236|ref|ZP_04624201.1| D-3-phosphoglycerate dehydrogenase [Yersinia kristensenii ATCC
33638]
gi|238698509|gb|EEP91261.1| D-3-phosphoglycerate dehydrogenase [Yersinia kristensenii ATCC
33638]
Length = 413
Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGRLM-ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + GI+ + I E +NIA +L S + +
Sbjct: 325 VNFPEVSLPAHGDNTRRLLHIHENRPGILTSINKIFAEQNVNIAAQYLQTSADIGYVVID 384
Query: 69 LCIDG-SILNSVLEKLSVNVTIRFVKQF 95
+ D L+ + +
Sbjct: 385 VETDDAENAEKALQAMKAIPGTIRARLL 412
>gi|25027935|ref|NP_737989.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium efficiens
YS-314]
gi|259506328|ref|ZP_05749230.1| phosphoglycerate dehydrogenase [Corynebacterium efficiens YS-314]
gi|23493218|dbj|BAC18189.1| putative D-3-phosphoglycerate dehydrogenase [Corynebacterium
efficiens YS-314]
gi|259166108|gb|EEW50662.1| phosphoglycerate dehydrogenase [Corynebacterium efficiens YS-314]
Length = 530
Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 34/78 (43%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ +I D+ + + D G + VG LG GINI L ++ + A+
Sbjct: 441 KITRINGRGLDMRAEGRNLFLEYTDAPGALGTVGTKLGAAGINIEAAALTQAAKGDGAVL 500
Query: 68 FLCIDGSILNSVLEKLSV 85
L ++ + ++E+++
Sbjct: 501 ILRVEREVPEELVEEITA 518
>gi|291618749|ref|YP_003521491.1| SerA [Pantoea ananatis LMG 20103]
gi|291153779|gb|ADD78363.1| SerA [Pantoea ananatis LMG 20103]
gi|327395082|dbj|BAK12504.1| D-3-phosphoglycerate dehydrogenase SerA [Pantoea ananatis AJ13355]
Length = 412
Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + G++ + I E GINIA +L S + +
Sbjct: 325 VNFPEVSLPMHGISASRLLHIHENRPGVLTAINQIFAEQGINIAAQYLQTSPMMGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + L+ + +
Sbjct: 385 IDAEHELAEKALQLMKAIPGTIRARLL 411
>gi|254483175|ref|ZP_05096408.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain,
putative [marine gamma proteobacterium HTCC2148]
gi|214036546|gb|EEB77220.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain,
putative [marine gamma proteobacterium HTCC2148]
Length = 409
Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + E+ G + ++ ++ GI+ + N+ E G+N++ +L + S
Sbjct: 318 NGTTISSVNFPEVALPEHAGSHRLLHIHRNVPGIMSAINNVFSETGVNVSAQYLQTTASV 377
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +D + LEKL+ +
Sbjct: 378 GYV--VIDVDAEYSDIALEKLAAIDGTIRSRVL 408
>gi|332181940|gb|AEE17628.1| Phosphoglycerate dehydrogenase [Treponema brennaborense DSM 12168]
Length = 392
Score = 75.5 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 4/89 (4%)
Query: 10 IKIQEINFD--VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + D + +CI + +I +V + IL +NI + A +
Sbjct: 305 VNFPKCKIDDPLPAKGTRLCIAHRNIPNMVGQITTILANASLNIEGMV--NQNRGDLAYN 362
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ ++ + + VL KL + V+ E
Sbjct: 363 IIDVETKVGSDVLNKLRTISDVITVRPIE 391
>gi|326772878|ref|ZP_08232162.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Actinomyces viscosus C505]
gi|326637510|gb|EGE38412.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Actinomyces viscosus C505]
Length = 396
Score = 75.5 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E G + IVN ++ +V V I+ ++G NIA+ L E A++ +
Sbjct: 313 VNFPEAVMTRQEGTHRLVIVNRNVPNMVGQVSTIVAQHGQNIAN--LLNKSRGELAVTLV 370
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++G I VLE+L + +
Sbjct: 371 DVEGEIEPKVLEELRAIDGVLSARGI 396
>gi|238798642|ref|ZP_04642117.1| D-3-phosphoglycerate dehydrogenase [Yersinia mollaretii ATCC 43969]
gi|238717528|gb|EEQ09369.1| D-3-phosphoglycerate dehydrogenase [Yersinia mollaretii ATCC 43969]
Length = 413
Score = 75.5 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 30/88 (34%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGRLM-ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + GI+ + I E +NIA +L S + +
Sbjct: 325 VNFPEVSLPAHGDNTRRLLHIHENRPGILTSINKIFAEQNVNIAAQYLQTSAEIGYVVID 384
Query: 69 LCIDGS-ILNSVLEKLSVNVTIRFVKQF 95
+ D + L+ + +
Sbjct: 385 VETDDPDNADKALQAMKSIPGTIRARLL 412
>gi|210633399|ref|ZP_03297772.1| hypothetical protein COLSTE_01685 [Collinsella stercoris DSM 13279]
gi|210159161|gb|EEA90132.1| hypothetical protein COLSTE_01685 [Collinsella stercoris DSM 13279]
Length = 366
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 36/95 (37%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ R I ++ ++ + + + D G + + L +NIA R+++
Sbjct: 135 GGGRMRISAINGVHVEISGLYTTLFVAHQDAPGALAALTGALAHASMNIAFCRTYRTEAG 194
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A S DG+ VL+ + + + E
Sbjct: 195 GRAYSVFETDGAPATGVLDAVRALDLVDYATFIEM 229
>gi|120435092|ref|YP_860778.1| D-3-phosphoglycerate dehydrogenase [Gramella forsetii KT0803]
gi|117577242|emb|CAL65711.1| D-3-phosphoglycerate dehydrogenase [Gramella forsetii KT0803]
Length = 630
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G + + + + ++ + GI+ + IL + INI +L +++
Sbjct: 540 GGTTNSVNFPNLQLPILENAHRLIHIHHNKPGIIAHINKILAAHDINIVGQYLKTNETVG 599
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ I+ ID + V+++L +
Sbjct: 600 YVIT--DIDKAYDADVIKELKGIQGTIRFRVL 629
>gi|330446915|ref|ZP_08310566.1| serA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
gi|328491106|dbj|GAA05063.1| serA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
Length = 409
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I GINIA L + +
Sbjct: 325 VGFPEVSLPEHRGCSRLLHIHENRPGILNQITTIFASEGINIAAQFLQTGAEIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ L KL +
Sbjct: 383 DVETERSKEALAKLKSIEGTIRARILH 409
>gi|254819120|ref|ZP_05224121.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium intracellulare
ATCC 13950]
Length = 528
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 36/90 (40%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I NFD+ + + I D G + +G +LG G+NI L A
Sbjct: 438 KIVQINGRNFDLRARGINLVINYVDQPGALGKIGTLLGSAGVNIQAAQLSEDAEGPGATI 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D + V ++ V ++ +
Sbjct: 498 LLRLDRDVPGDVRAEIGAAVGANKLEVVDL 527
>gi|238916703|ref|YP_002930220.1| D-3-phosphoglycerate dehydrogenase [Eubacterium eligens ATCC 27750]
gi|238872063|gb|ACR71773.1| D-3-phosphoglycerate dehydrogenase [Eubacterium eligens ATCC 27750]
Length = 387
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + V + I + + ++ ++ + +LG GINI+
Sbjct: 296 NGNIVNSVNYPNCDCGVCATKGRITVCHKNVPAVISKITTVLGAAGINISSM--ANQSRG 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A S L I+ S +V+E+LS + V+ +
Sbjct: 354 DYAYSLLDIEASAPEAVVEELSAIEGVIKVRVIK 387
>gi|313675140|ref|YP_004053136.1| l-serine dehydratase, iron-sulfur-dependent, beta subunit
[Marivirga tractuosa DSM 4126]
gi|312941838|gb|ADR21028.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Marivirga tractuosa DSM 4126]
Length = 225
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 31/93 (33%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G K+ ++ + I D G + F+ NI+ NIA + R
Sbjct: 128 GGGVINISKVNGFTANISAALHTLIITAEDTQGSIAFISNIISNDKANIATMSVSRKGKH 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + +D + LE L + V
Sbjct: 188 DIACLAIEMDTGLKTISLEYLKNLDWVIDVIYI 220
>gi|296119581|ref|ZP_06838139.1| phosphoglycerate dehydrogenase [Corynebacterium ammoniagenes DSM
20306]
gi|295967464|gb|EFG80731.1| phosphoglycerate dehydrogenase [Corynebacterium ammoniagenes DSM
20306]
Length = 528
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG + ++I D+ + +D G + VG++LG GINI L + + +
Sbjct: 434 DGVEKIVRIDGRGVDMRATGRNLFFSYSDRPGALGIVGSVLGNAGINIKAAALTQGKQDD 493
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A+ L ++ + + ++ + + + Q F+
Sbjct: 494 AAVLILRVEREVNDELIADIQDKLGASSL-QVNFD 527
>gi|163802939|ref|ZP_02196826.1| D-3-phosphoglycerate dehydrogenase [Vibrio sp. AND4]
gi|159173229|gb|EDP58057.1| D-3-phosphoglycerate dehydrogenase [Vibrio sp. AND4]
Length = 409
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I E GINIA +L + + +
Sbjct: 325 VNFPEVSLPEHRECSRLLHIHKNRPGILTQINTIFAEDGINIAGQYLQTAAEIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ S L KL +
Sbjct: 383 DVETSRAEEALVKLKGIEGTIRARILH 409
>gi|294142436|ref|YP_003558414.1| D-3-phosphoglycerate dehydrogenase [Shewanella violacea DSS12]
gi|293328905|dbj|BAJ03636.1| D-3-phosphoglycerate dehydrogenase [Shewanella violacea DSS12]
Length = 409
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI++ + E GINIA +L + + +
Sbjct: 325 VNFPEVSLAQHKNASRLLHIHHNRPGILIKINQAFAEKGINIAAQYLQTTAEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D LE++ +
Sbjct: 383 EVDSDQAEEALEQMKAIEGTIRTRLLH 409
>gi|240168941|ref|ZP_04747600.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium kansasii ATCC
12478]
Length = 528
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 37/90 (41%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I +FD+ + + + D G + +G +LG G+NI L A
Sbjct: 438 KVVQINGRHFDMRAEGINLIVHYVDQPGALGKIGTLLGAAGVNIHAAQLSEDVEGPRATI 497
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L +D ++ + V + V ++ +
Sbjct: 498 LLRLDQAVPDDVRSAMVAAVGANKIEVVDL 527
>gi|315187470|gb|EFU21226.1| D-3-phosphoglycerate dehydrogenase [Spirochaeta thermophila DSM
6578]
Length = 397
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 4/93 (4%)
Query: 5 GKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + D+ I I N +I +V + +LG INI+
Sbjct: 299 GNIRNSVNFPTCQLDISGD-TRILIANRNIPDMVRQITGVLGSAHINISDMI--NKHKGN 355
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + +DG I + E+LS + V+
Sbjct: 356 IAYNIIDVDGDIPSEATEQLSQIEGVIMVRVLR 388
>gi|304310065|ref|YP_003809663.1| D-3-phosphoglycerate dehydrogenase [gamma proteobacterium HdN1]
gi|301795798|emb|CBL43997.1| D-3-phosphoglycerate dehydrogenase [gamma proteobacterium HdN1]
Length = 409
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 32/93 (34%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + E++ + ++ ++ G++ + + E INIA +L +
Sbjct: 318 NGTTISSVNFPEVSLAGHANVHRLLHIHKNVPGVMSAINRVFSENNINIAGQYLRTNDKI 377
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ++ L+KL +
Sbjct: 378 GYV--VIEVEAGSSEVALQKLREVEGTIRTRVL 408
>gi|224825091|ref|ZP_03698197.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Lutiella
nitroferrum 2002]
gi|224602762|gb|EEG08939.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Lutiella
nitroferrum 2002]
Length = 409
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G+ + ++ + G++ + + GINIA +L ++ + +
Sbjct: 325 VNFPEVSLPEHRGKCRLLHIHKNQPGVLARINDEFSRAGINIAGQYLQTNEEIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID + + LE L +
Sbjct: 383 EIDSAASQTALETLQRIEGTLRCRVL 408
>gi|88802343|ref|ZP_01117870.1| D-3-phosphoglycerate dehydrogenase [Polaribacter irgensii 23-P]
gi|88781201|gb|EAR12379.1| D-3-phosphoglycerate dehydrogenase [Polaribacter irgensii 23-P]
Length = 630
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S + I ++ ++ G++ + IL +Y +NI +L S
Sbjct: 539 SGNTVDAVNFPNIRLPRQTKAHRFLHIHKNVPGVMAKINKILAKYDLNIIGQYLSTDSSV 598
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ I+ +D V+EKL +
Sbjct: 599 GYVIT--DLDKEYNKEVIEKLRNIEGTIKFRVL 629
>gi|329944772|ref|ZP_08292851.1| 4-phosphoerythronate dehydrogenase [Actinomyces sp. oral taxon 170
str. F0386]
gi|328529908|gb|EGF56798.1| 4-phosphoerythronate dehydrogenase [Actinomyces sp. oral taxon 170
str. F0386]
Length = 396
Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ IVN ++ +V V I+ ++G NIA+ L E A++ + ++G I VLE+L
Sbjct: 327 HRLVIVNRNVPNMVGQVSTIVAQHGQNIAN--LLNKSRGELAVTLVDVEGEIEPKVLEEL 384
Query: 84 SVNVTIRFVKQF 95
+ +
Sbjct: 385 RAIDGVLSARGI 396
>gi|320532852|ref|ZP_08033625.1| 4-phosphoerythronate dehydrogenase [Actinomyces sp. oral taxon 171
str. F0337]
gi|320134927|gb|EFW27102.1| 4-phosphoerythronate dehydrogenase [Actinomyces sp. oral taxon 171
str. F0337]
Length = 396
Score = 74.7 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
G + IVN ++ +V V I+ ++G NIA+ L E A++ + ++G I VL+
Sbjct: 325 GTHRLVIVNRNVPNMVGQVSTIVAQHGQNIAN--LLNKSRGELAVTLVDVEGEIEPKVLK 382
Query: 82 KLSVNVTIRFVKQF 95
+L + +
Sbjct: 383 ELRAIDGVLSARGI 396
>gi|238785665|ref|ZP_04629642.1| D-3-phosphoglycerate dehydrogenase [Yersinia bercovieri ATCC 43970]
gi|238713444|gb|EEQ05479.1| D-3-phosphoglycerate dehydrogenase [Yersinia bercovieri ATCC 43970]
Length = 413
Score = 74.7 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGRLM-ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + GI+ + I E +NIA +L S + +
Sbjct: 325 VNFPEVSLPAHGDNTRRLLHIHENRPGILTSINRIFAEQNVNIAAQYLQTSAEIGYVVID 384
Query: 69 LCIDG-SILNSVLEKLSVNVTIRFVKQF 95
+ D L+ + +
Sbjct: 385 VETDDEENAERALQAMKAIPGTIRARLL 412
>gi|187735211|ref|YP_001877323.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Akkermansia muciniphila ATCC BAA-835]
gi|187425263|gb|ACD04542.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Akkermansia muciniphila ATCC BAA-835]
Length = 523
Score = 74.7 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 1 VFSDGKPRFIKIQEIN-FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRS 59
V ++G P ++ N D+ +C+ D GI+ +G+ L GINI +
Sbjct: 426 VVTEGIPMVSRLNNFNGLYADLRGTTLCLRYKDRPGIIALIGSALSSNGINIDNIAAPAD 485
Query: 60 QSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+T A++ + + + + +L+K++ +
Sbjct: 486 HATREALTVIKTNQPVSDELLDKIAKEIDAISAFSLNL 523
>gi|302878366|ref|YP_003846930.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Gallionella capsiferriformans ES-2]
gi|302581155|gb|ADL55166.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Gallionella capsiferriformans ES-2]
Length = 394
Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ + NA++ ++ + + L GINI E A + + D + ++
Sbjct: 319 SAHRLAVANANVPNMLGQISSALAGAGINIHTMM--NKSRGEMAYTLVDTDSPVPPQLIA 376
Query: 82 KLSVNVTIRFVKQF 95
++ + V+
Sbjct: 377 QIEAIQGVLMVRCL 390
>gi|38233698|ref|NP_939465.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium diphtheriae
NCTC 13129]
gi|38199959|emb|CAE49627.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium diphtheriae]
Length = 531
Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I + D+ + D G + VG LG G NI L + + A
Sbjct: 441 KIVRINKRGLDLRAQGFNVYFQYTDTPGALGKVGTALGAQGFNIDAAALSQDSEGDGATL 500
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
L +D I ++++E+++ + +F+
Sbjct: 501 VLRVDKPIPDALVEEIAAGIGA-EAFAVDFD 530
>gi|238795127|ref|ZP_04638717.1| D-3-phosphoglycerate dehydrogenase [Yersinia intermedia ATCC 29909]
gi|238725526|gb|EEQ17090.1| D-3-phosphoglycerate dehydrogenase [Yersinia intermedia ATCC 29909]
Length = 413
Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGRLM-ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + GI+ + I E +NIA +L S + +
Sbjct: 325 VNFPEVSLPAHGDNTRRLLHIHENRPGILTSINKIFAEQDVNIAAQYLQTSAEIGYVVID 384
Query: 69 LCIDG-SILNSVLEKLSVNVTIRFVKQF 95
+ D L+ + +
Sbjct: 385 VETDDAENAEKALQAMKAIPGTIRARLL 412
>gi|238924236|ref|YP_002937752.1| hypothetical protein EUBREC_1874 [Eubacterium rectale ATCC 33656]
gi|238875911|gb|ACR75618.1| hypothetical protein EUBREC_1874 [Eubacterium rectale ATCC 33656]
gi|291529108|emb|CBK94694.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Eubacterium rectale M104/1]
Length = 387
Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + + I++ ++ G++ + L E IN++ L
Sbjct: 296 NGNIVHSVNFPDCSMGACTASGRVGILHKNVKGMIGQITTALAEADINVSD--LTNKGKG 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A S L +D +I S +EKLS + V+ +
Sbjct: 354 DYAYSLLDLDSAIDASTVEKLSAIDGVLRVRVIK 387
>gi|225621170|ref|YP_002722428.1| L-serine dehydratase, iron-sulfur-dependent subunit beta
[Brachyspira hyodysenteriae WA1]
gi|225215990|gb|ACN84724.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Brachyspira hyodysenteriae WA1]
Length = 224
Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G K+ I I IVN D+ GI+ V +I+ E GINI + ++
Sbjct: 125 GGGLIVLDKVNGIEVHYKGDFPTIAIVNRDVPGIIAKVTSIIFENGINIENMNVTPQFEG 184
Query: 63 ---EHAISFLCIDGSILNSVLEKLSVNVTIRF 91
+AI + + I + +K+ IR
Sbjct: 185 PNRGYAIIVIGMTDVISKDIEDKIRKIENIRD 216
>gi|317493811|ref|ZP_07952228.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316918138|gb|EFV39480.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 412
Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + G++ + I E G+NIA +L + + +
Sbjct: 325 VNFPEVSLPMHEENVSRLLHIHENRPGVLTQINQIFAEEGVNIAAQYLQTNAQIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + L+++ +
Sbjct: 385 IETETERAEAALQRMKEIAGTIRARLL 411
>gi|304396733|ref|ZP_07378613.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Pantoea
sp. aB]
gi|304355529|gb|EFM19896.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Pantoea
sp. aB]
Length = 412
Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + G++ + I E GINIA +L S + +
Sbjct: 325 VNFPEVSLPIHGISASRLLHIHENRPGVLTAINQIFAEQGINIAAQYLQTSPFMGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + + L+ + +
Sbjct: 385 IDAEPEVAENALQLMKAIPGTIRARLL 411
>gi|269140292|ref|YP_003296993.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Edwardsiella tarda EIB202]
gi|267985953|gb|ACY85782.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Edwardsiella tarda EIB202]
gi|304560118|gb|ADM42782.1| D-3-phosphoglycerate dehydrogenase [Edwardsiella tarda FL6-60]
Length = 412
Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ +++ + + + + G++ + I E G+NIA +L + + + +
Sbjct: 325 VNFPQVSLPMHEDHVSRLLHTHENRPGMLNAINQIFAEEGVNIAAQYLQTTPTIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + L+++ +
Sbjct: 385 VETETERAEAALQRMREIPGTVRARLL 411
>gi|242238013|ref|YP_002986194.1| D-3-phosphoglycerate dehydrogenase [Dickeya dadantii Ech703]
gi|242130070|gb|ACS84372.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Dickeya
dadantii Ech703]
Length = 410
Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ R + ++ + G++ + NI GINIA +L S + +
Sbjct: 325 VNFPEVSLPAHGERASRLLHIHENRPGVMTQINNIFAAQGINIAAQYLQTSAEIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ DG+ ++ L+ + +
Sbjct: 385 VETDGA--DTALQLMKAIPGTIRARLL 409
>gi|118579173|ref|YP_900423.1| D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
[Pelobacter propionicus DSM 2379]
gi|118501883|gb|ABK98365.1| D-3-phosphoglycerate dehydrogenase [Pelobacter propionicus DSM
2379]
Length = 390
Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 11 KIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ N ++ I ++N+++ ++ + + LGEYG+NI E A + +
Sbjct: 303 SVNYPNCEMAPTGKTRITLLNSNVPKVISRITSTLGEYGLNIDEML--NKNRGEVAYNII 360
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ S+ + ++EKL + V+
Sbjct: 361 DVSDSVPDELIEKLRQVDGVVAVRLI 386
>gi|90580301|ref|ZP_01236108.1| Phosphoglycerate dehydrogenase [Vibrio angustum S14]
gi|90438603|gb|EAS63787.1| Phosphoglycerate dehydrogenase [Vibrio angustum S14]
Length = 409
Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + G++ + I GINIA L + +
Sbjct: 325 VGFPEVSLPEHRGCSRLLHIHENRPGVLNQITTIFASEGINIAAQFLQTGAEIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ L KL +
Sbjct: 383 DVETERSKEALAKLKTIEGTIRARILH 409
>gi|291524974|emb|CBK90561.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Eubacterium rectale DSM 17629]
Length = 387
Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + + I++ ++ G++ + L E IN++ L
Sbjct: 296 NGNIVHSVNFPDCSMGACTASGRVGILHKNVKGMIGQITTALAEADINVSD--LTNKGKG 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A S L +D +I S +EKLS + V+ +
Sbjct: 354 DYAYSLLDLDSAIDASTVEKLSAIDGVLRVRVIK 387
>gi|15827900|ref|NP_302163.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium leprae TN]
gi|221230377|ref|YP_002503793.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium leprae Br4923]
gi|3122862|sp|O33116|SERA_MYCLE RecName: Full=D-3-phosphoglycerate dehydrogenase; Short=PGDH
gi|2414551|emb|CAB16440.1| phosphoglycerate dehydrogenase [Mycobacterium leprae]
gi|13093453|emb|CAC30645.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium leprae]
gi|219933484|emb|CAR71787.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium leprae Br4923]
Length = 528
Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 31/76 (40%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ +++ NFD+ + + I D G + +G +LG G+NI L A
Sbjct: 438 KIVQVNGRNFDLRAQGMNLVIRYVDQPGALGKIGTLLGAAGVNIQAAQLSEDTEGPGATI 497
Query: 68 FLCIDGSILNSVLEKL 83
L +D + V +
Sbjct: 498 LLRLDQDVPGDVRSAI 513
>gi|300870085|ref|YP_003784956.1| L-serine dehydratase iron-sulfur-dependent subunit beta
[Brachyspira pilosicoli 95/1000]
gi|300687784|gb|ADK30455.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Brachyspira pilosicoli 95/1000]
Length = 229
Score = 74.3 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G K+ I I IVN D+ GI+ V +I+ E GINI + ++
Sbjct: 130 GGGLIVLDKVNGIEVHYKGDFPTIAIVNKDVPGIIAKVTSIIFENGINIENMNVTPQFEG 189
Query: 63 ---EHAISFLCIDGSILNSVLEKLSVNVTIRF 91
+AI + + I + E++ IR
Sbjct: 190 PNQGYAIIVIGMTDVISKEIEERIRKIENIRD 221
>gi|225572435|ref|ZP_03781299.1| hypothetical protein RUMHYD_00732 [Blautia hydrogenotrophica DSM
10507]
gi|225040072|gb|EEG50318.1| hypothetical protein RUMHYD_00732 [Blautia hydrogenotrophica DSM
10507]
Length = 387
Score = 74.3 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Query: 4 DGKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+G R + + V GR + I + +I ++ ILG+ G+NIA
Sbjct: 296 NGNIRNSVNFPNCDMGVCKGRSRVAITHRNIPNMISQFSKILGDEGMNIADMT--NKSRG 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E+A + + ++ I +E L + V+
Sbjct: 354 EYAYTLMDMEAEIPGEAIEALESVEGVSRVRVVR 387
>gi|89074091|ref|ZP_01160590.1| Phosphoglycerate dehydrogenase [Photobacterium sp. SKA34]
gi|89050027|gb|EAR55553.1| Phosphoglycerate dehydrogenase [Photobacterium sp. SKA34]
Length = 409
Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + G++ + I GINIA L + +
Sbjct: 325 VGFPEVSLPEHRGCSRLLHIHENRPGVLNQITTIFASEGINIAAQFLQTGAEIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ L KL +
Sbjct: 383 DVETERSKEALAKLKTIEGTIRARILH 409
>gi|170748867|ref|YP_001755127.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Methylobacterium radiotolerans JCM 2831]
gi|170655389|gb|ACB24444.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Methylobacterium radiotolerans JCM 2831]
Length = 416
Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 6/86 (6%), Positives = 25/86 (29%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V ++ G++ + ++ +NIA + +
Sbjct: 327 VNFPQVQLPARPTGTRFIHVQRNLPGMLGRLNDVFSRGHVNIAAQFYQTDGEVGYVVLET 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ ++L ++ +
Sbjct: 387 DATDADAEALLTEIRAIPGTIRARLL 412
>gi|238921218|ref|YP_002934733.1| phosphoglycerate dehydrogenase [Edwardsiella ictaluri 93-146]
gi|238870786|gb|ACR70497.1| phosphoglycerate dehydrogenase [Edwardsiella ictaluri 93-146]
Length = 412
Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ +++ + + + + G++ + I E G+NIA +L + + + +
Sbjct: 325 VNFPQVSLPMHEDHVSRLLHTHENRPGMLNAINQIFAEEGVNIAAQYLQTTPTIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + L+++ +
Sbjct: 385 VETETERAEAALQRMREIPGTVRARLL 411
>gi|163749107|ref|ZP_02156357.1| D-3-phosphoglycerate dehydrogenase [Shewanella benthica KT99]
gi|161331177|gb|EDQ02066.1| D-3-phosphoglycerate dehydrogenase [Shewanella benthica KT99]
Length = 409
Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI++ + E GINIA +L + + +
Sbjct: 325 VNFPEVSLAQHKDTSRLLHIHHNRPGILIKINQAFAEKGINIAAQYLQTTAEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D + LE+L +
Sbjct: 383 EVDSNQAEEALEQLKAIEGTIRTRLLH 409
>gi|262203115|ref|YP_003274323.1| D-3-phosphoglycerate dehydrogenase [Gordonia bronchialis DSM 43247]
gi|262086462|gb|ACY22430.1| D-3-phosphoglycerate dehydrogenase [Gordonia bronchialis DSM 43247]
Length = 531
Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I NFD+ + + AD G + +G +LG GI+I L + A
Sbjct: 441 KIVNINGRNFDLRAEGHNLLVSYADQPGSLGKIGTLLGNAGIDILAAGLSQDAEGAGATI 500
Query: 68 FLCIDGSILNSVLEKLSV 85
L + I + V+ ++
Sbjct: 501 VLRVGRKIDDDVVAAIAD 518
>gi|260588475|ref|ZP_05854388.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Blautia hansenii DSM 20583]
gi|331082248|ref|ZP_08331375.1| hypothetical protein HMPREF0992_00299 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260540950|gb|EEX21519.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Blautia hansenii DSM 20583]
gi|330403042|gb|EGG82607.1| hypothetical protein HMPREF0992_00299 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 387
Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ I + +I ++ +LG+ G+NIA+ ++A + + + I V + L
Sbjct: 318 RLTINHKNIPNMISQFTKVLGDAGVNIANMI--NKSKGDYAYTMIDVTMPISKEVAQALK 375
Query: 85 VNVTIRFVKQFE 96
+ V+ +
Sbjct: 376 AIEEVYRVRIIK 387
>gi|311695445|gb|ADP98318.1| D-3-phosphoglycerate dehydrogenase-like protein [marine bacterium
HP15]
Length = 409
Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + + ++ ++ G++ + + E GIN+ +L + + +
Sbjct: 325 VNFPEVALPSHPNQHRLLHIHENVPGVMSEINQVFSENGINVCGQYLQTKEDIGYV--VV 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ EKL +
Sbjct: 383 DVNKEYGELAQEKLLKVKGTIRCRVL 408
>gi|50122826|ref|YP_051993.1| D-3-phosphoglycerate dehydrogenase [Pectobacterium atrosepticum
SCRI1043]
gi|49613352|emb|CAG76803.1| D-3-phosphoglycerate dehydrogenase [Pectobacterium atrosepticum
SCRI1043]
Length = 410
Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ V R + ++ + G++ + I E GINIA +L + + +
Sbjct: 325 VNFPEVSLPVHGARASRLLHIHENRPGMITKINQIFAEQGINIAAQYLQTTPEIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ DG+ + L+ + +
Sbjct: 385 VETDGA--QTALQLMKAIPGTIRARLL 409
>gi|90412059|ref|ZP_01220066.1| phosphoglycerate dehydrogenase [Photobacterium profundum 3TCK]
gi|90327037|gb|EAS43416.1| phosphoglycerate dehydrogenase [Photobacterium profundum 3TCK]
Length = 409
Score = 74.3 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I GINIA +L + +
Sbjct: 325 VGFPEVSLPEHRNCSRLLHIHENRPGILNQITTIFASEGINIAAQYLQTGAEVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ LEKL +
Sbjct: 383 DVEIERAEEALEKLKAIQGTIRARILH 409
>gi|153010427|ref|YP_001371641.1| D-3-phosphoglycerate dehydrogenase [Ochrobactrum anthropi ATCC
49188]
gi|151562315|gb|ABS15812.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Ochrobactrum anthropi ATCC 49188]
Length = 412
Score = 74.3 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 27/86 (31%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + GI+ + N+ + INIA L + +
Sbjct: 326 VNFPQVQLPPRPTGTRFMHVHENRPGILNSLVNVFSTHNINIASQFLQTDGEVGYLVMEA 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G +VL+ + +
Sbjct: 386 DGVGEASETVLQAIREIPGTIRARLL 411
>gi|119480099|ref|XP_001260078.1| d-3-phosphoglycerate dehydrogenase [Neosartorya fischeri NRRL 181]
gi|119408232|gb|EAW18181.1| d-3-phosphoglycerate dehydrogenase [Neosartorya fischeri NRRL 181]
Length = 582
Score = 73.9 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 35/109 (32%), Gaps = 14/109 (12%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL------ 56
S +P ++ ++ N D G + VG++LG+ G+NI +
Sbjct: 474 SGDQPLINRLGRFETSFVPEGTLLICENYDSPGKIGAVGSLLGQEGVNINFMTVAPVSRK 533
Query: 57 -----GRSQSTE---HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
G + A+ L ID + V + L +
Sbjct: 534 FAFASGETDDGGSKHEALMILGIDKVVDQRVADGLVKGGGVLSASVISL 582
>gi|90023028|ref|YP_528855.1| D-3-phosphoglycerate dehydrogenase [Saccharophagus degradans 2-40]
gi|89952628|gb|ABD82643.1| D-3-phosphoglycerate dehydrogenase [Saccharophagus degradans 2-40]
Length = 411
Score = 73.9 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 31/93 (33%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + E+ + V+ ++ G++ + I E INI +L +
Sbjct: 320 NGTTITSVNFPEVALPSHDKVHRLLHVHKNVPGVLTAINKIFSESDINICGQYLQTNDKL 379
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ L +D + LE+L +
Sbjct: 380 GYV--ILDVDRAYSEMALEQLRKVTGTIRCRVL 410
>gi|160873994|ref|YP_001553310.1| D-3-phosphoglycerate dehydrogenase [Shewanella baltica OS195]
gi|217972051|ref|YP_002356802.1| D-3-phosphoglycerate dehydrogenase [Shewanella baltica OS223]
gi|304411118|ref|ZP_07392734.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Shewanella baltica OS183]
gi|307301759|ref|ZP_07581517.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Shewanella baltica BA175]
gi|160859516|gb|ABX48050.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Shewanella baltica OS195]
gi|217497186|gb|ACK45379.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Shewanella baltica OS223]
gi|304350653|gb|EFM15055.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Shewanella baltica OS183]
gi|306913797|gb|EFN44218.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Shewanella baltica BA175]
gi|315266223|gb|ADT93076.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Shewanella baltica OS678]
Length = 409
Score = 73.9 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + G + ++ + G+++ + E GINIA +L + + +
Sbjct: 325 VNFPEVSLPMHKGTSRLLHIHQNRPGVLIKINQAFSEKGINIAAQYLQTTAEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D L +L +
Sbjct: 383 EVDTHQAEEALVELKAIEGTLRTRVL 408
>gi|126175699|ref|YP_001051848.1| D-3-phosphoglycerate dehydrogenase [Shewanella baltica OS155]
gi|125998904|gb|ABN62979.1| D-3-phosphoglycerate dehydrogenase [Shewanella baltica OS155]
Length = 409
Score = 73.9 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + G + ++ + G+++ + E GINIA +L + + +
Sbjct: 325 VNFPEVSLPMHKGTSRLLHIHQNRPGVLIKINQAFSEKGINIAAQYLQTTAEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D L +L +
Sbjct: 383 EVDTHQAEEALVELKAIEGTLRTRVL 408
>gi|239835142|ref|ZP_04683469.1| D-3-phosphoglycerate dehydrogenase [Ochrobactrum intermedium LMG
3301]
gi|239821281|gb|EEQ92851.1| D-3-phosphoglycerate dehydrogenase [Ochrobactrum intermedium LMG
3301]
Length = 417
Score = 73.9 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 27/86 (31%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + GI+ + N+ + INIA L + +
Sbjct: 331 VNFPQVQLPPRPTGTRFMHVHENRPGILNSLVNVFSTHNINIASQFLQTDGEVGYLVMEA 390
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G +VL+ + +
Sbjct: 391 DGVGDASETVLQAIREIPGTIRARLL 416
>gi|160946963|ref|ZP_02094166.1| hypothetical protein PEPMIC_00924 [Parvimonas micra ATCC 33270]
gi|158447347|gb|EDP24342.1| hypothetical protein PEPMIC_00924 [Parvimonas micra ATCC 33270]
Length = 220
Score = 73.9 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 32/94 (34%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I ++ I + D G++ V IL E INI + R
Sbjct: 127 GGGAIEITNINGVDVKFGGVYNTIILKYNDRYGMIAQVSTILAENKINIGSLVMNRED-- 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + IDG I + ++S + +
Sbjct: 185 GVASAIMEIDGGIDEMAIYRISKLPDMLECMILK 218
>gi|291614524|ref|YP_003524681.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Sideroxydans lithotrophicus ES-1]
gi|291584636|gb|ADE12294.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Sideroxydans lithotrophicus ES-1]
Length = 396
Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 36/91 (39%), Gaps = 3/91 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + + I N+++ ++ + L + INI + E A + +
Sbjct: 308 VNFPNVSMSRE-SAFRVAIANSNVPNMLGQISTALAKASINIHNMT--NKSRGEMAYTLV 364
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
D ++ +++ +++ + V+ D
Sbjct: 365 DTDTALPETLIAQVAAIPGVLMVRALPLEAD 395
>gi|153812226|ref|ZP_01964894.1| hypothetical protein RUMOBE_02624 [Ruminococcus obeum ATCC 29174]
gi|149831633|gb|EDM86720.1| hypothetical protein RUMOBE_02624 [Ruminococcus obeum ATCC 29174]
Length = 387
Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I I + +I ++ ILG G+NIA +A + + ++ + L++L
Sbjct: 318 RITICHKNIPNMISQFTKILGSEGLNIADMT--NKSRGSYAYTIIDLESAASKEALDELK 375
Query: 85 VNVTIRFVKQFE 96
+ V+ +
Sbjct: 376 AIEGVSKVRVIK 387
>gi|152999374|ref|YP_001365055.1| D-3-phosphoglycerate dehydrogenase [Shewanella baltica OS185]
gi|151363992|gb|ABS06992.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Shewanella baltica OS185]
Length = 409
Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + G + ++ + G+++ + E GINIA +L + + +
Sbjct: 325 VNFPEVSLPMHKGTSRLLHIHQNRPGVLIKINQAFSEKGINIAAQYLQTTAEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D L +L +
Sbjct: 383 EVDTHQAEEALVELKAIEGTLRTRVL 408
>gi|308188016|ref|YP_003932147.1| D-3-phosphoglycerate dehydrogenase [Pantoea vagans C9-1]
gi|308058526|gb|ADO10698.1| D-3-phosphoglycerate dehydrogenase [Pantoea vagans C9-1]
Length = 412
Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + G++ + I E GINIA +L S + +
Sbjct: 325 VNFPEVSLPIHGISASRLLHIHENRPGVLTAINQIFAEQGINIAAQYLQTSPFMGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + + L + +
Sbjct: 385 IDAEPEVAENALHLMKAIPGTIRARLL 411
>gi|114561744|ref|YP_749257.1| D-3-phosphoglycerate dehydrogenase [Shewanella frigidimarina NCIMB
400]
gi|114333037|gb|ABI70419.1| D-3-phosphoglycerate dehydrogenase [Shewanella frigidimarina NCIMB
400]
Length = 409
Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + G+++ + E GINIA +L + + +
Sbjct: 325 VNFPEVSLAQHSGTSRLLHIHQNRPGVLIKINQAFSEKGINIAAQYLQTTAEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D L +L +
Sbjct: 383 EVDSDQAEEALVELKSIEGTIRARVL 408
>gi|325981793|ref|YP_004294195.1| phosphoglycerate dehydrogenase [Nitrosomonas sp. AL212]
gi|325531312|gb|ADZ26033.1| Phosphoglycerate dehydrogenase [Nitrosomonas sp. AL212]
Length = 398
Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 36/93 (38%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + +I + + + + NA++ IV + + + G+NI +
Sbjct: 305 NGNITHTVNFPDIRMERE-SPYRVAVANANVPNIVGQISTGMAKAGLNIHNMI--NKSRG 361
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E A + + +D + L++++ + +
Sbjct: 362 EIACTLVDVDSPVPQHALDEIAAIAGVLMARYL 394
>gi|288941799|ref|YP_003444039.1| NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase protein
[Allochromatium vinosum DSM 180]
gi|288897171|gb|ADC63007.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Allochromatium vinosum DSM 180]
Length = 389
Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ +I + IVN+++ ++ + L G+NI + A++ +
Sbjct: 305 VNFPDIVLPRT-EGQRLAIVNSNVPNMLGQISTDLAAAGLNIIDML--NRSRGDVAVTLV 361
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D L + + V+
Sbjct: 362 DVDKPCPEDTLALIRSIDGVLSVRCL 387
>gi|110637406|ref|YP_677613.1| bifunctional phosphoserine phosphatase/phosphoglycerate
dehydrogenase [Cytophaga hutchinsonii ATCC 33406]
gi|110280087|gb|ABG58273.1| phosphoserine phosphatase and phosphoglycerate dehydrogenase
(D-3-phosphoglycerate dehydrogenase) fusion [Cytophaga
hutchinsonii ATCC 33406]
Length = 633
Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 31/93 (33%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + I ++ + GI+ + N+ ++ INI +L ++
Sbjct: 542 NGTTLHSVNFPNIQLPELQEGHRFMHLHENQPGILAKINNLFAKHNINILAQYLKTNEQV 601
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ I+ I VL++L +
Sbjct: 602 GYVIT--DIAKIYDKEVLDELKEIPGTIRFRTL 632
>gi|119713591|gb|ABL97642.1| D-3-phosphoglycerate dehydrogenase [uncultured marine bacterium
EB0_39H12]
Length = 395
Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ I I N ++ ++ + LGE +NIA E A + +
Sbjct: 312 VNFPDVKLK-KTSDHRISITNKNVPAMIGQIATALGELNLNIAEMT--NVSRGEVAYNLI 368
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
I+ + + KLS + V+
Sbjct: 369 DIENEVNEESITKLSEIENVINVRLIN 395
>gi|261868183|ref|YP_003256105.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413515|gb|ACX82886.1| D-3-phosphoglycerate dehydrogenase (pgdh) [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 410
Score = 73.5 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + G++ + I E +NIA +L + +
Sbjct: 326 VNFPEVSLPEHAGSKRLLHIHENRPGVLNRINQIFVEANVNIAAQYLQTDPKIGYV--VI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ +L KL +
Sbjct: 384 DVETEDTAPLLAKLREIDGTIRARVL 409
>gi|295109732|emb|CBL23685.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Ruminococcus obeum A2-162]
Length = 387
Score = 73.5 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I I + +I ++ ILG G+NIA +A + + ++ + L++L
Sbjct: 318 RITIAHKNIPNMISQFTKILGSEGLNIADMT--NKSRGSYAYTIIDLESAASKEALDELR 375
Query: 85 VNVTIRFVKQFE 96
+ V+ +
Sbjct: 376 AIEGVSKVRVIK 387
>gi|293391743|ref|ZP_06636077.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952277|gb|EFE02396.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 410
Score = 73.5 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + G++ + I + +NIA +L + +
Sbjct: 326 VNFPEVSLPEHAGSKRLLHIHENRPGVLNRINQIFVDANVNIAAQYLQTDPKIGYV--VI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ +L KL +
Sbjct: 384 DVETEDTAPLLAKLREIDGTIRARVL 409
>gi|257094140|ref|YP_003167781.1| d-isomer specific 2-hydroxyacid dehydrogenase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046664|gb|ACV35852.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 390
Score = 73.5 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + +I+ + G I N ++ G++ V ++L + +N+
Sbjct: 300 NGNIVNSVNFPKISMERSPGTSRITFANENVSGVLGHVLSVLADNKVNVVDMM--NKSRG 357
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E A + + ++ ++V++ + + + V+
Sbjct: 358 ELAFNIVDVEREPGDAVIDAIKTSAHVIRVRVI 390
>gi|261823109|ref|YP_003261215.1| D-3-phosphoglycerate dehydrogenase [Pectobacterium wasabiae WPP163]
gi|261607122|gb|ACX89608.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Pectobacterium wasabiae WPP163]
Length = 410
Score = 73.5 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ V R + ++ + G++ + I E GINIA +L + + +
Sbjct: 325 VNFPEVSLPVHGARASRLLHIHENRPGVITKINQIFAEQGINIAAQYLQTTPEIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ DG+ + L+ + +
Sbjct: 385 VETDGA--QTALQLMKAIPGTIRARLL 409
>gi|227114285|ref|ZP_03827941.1| D-3-phosphoglycerate dehydrogenase [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 410
Score = 73.5 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ V R + ++ + GI+ + I E GINIA +L + + +
Sbjct: 325 VNFPEVSLPVHGARASRLLHIHENRPGIITKINQIFAEQGINIAAQYLQTTPEIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ DG+ + L+ + +
Sbjct: 385 VETDGA--QTALQLMKAIPGTIRARLL 409
>gi|71064945|ref|YP_263672.1| D-3-phosphoglycerate dehydrogenase [Psychrobacter arcticus 273-4]
gi|71037930|gb|AAZ18238.1| D-3-phosphoglycerate dehydrogenase [Psychrobacter arcticus 273-4]
Length = 408
Score = 73.5 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 32/92 (34%), Gaps = 2/92 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ E++ G + ++ ++ G++ + + E INI L +
Sbjct: 318 GNTATAVNFPEVSIPFKEGTHRLLHIHKNVPGVLSQINRLFAEANINILAQSLMT--EGD 375
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ +D + + L++L V+
Sbjct: 376 VGYLVMDVDYNDSTAALDQLKDVQETIRVRIL 407
>gi|24372451|ref|NP_716493.1| D-3-phosphoglycerate dehydrogenase [Shewanella oneidensis MR-1]
gi|24346434|gb|AAN53938.1|AE015531_4 D-3-phosphoglycerate dehydrogenase [Shewanella oneidensis MR-1]
Length = 409
Score = 73.5 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + G + ++ + G+++ + E GINIA +L + + +
Sbjct: 325 VNFPEVSLPMHKGTSRLLHIHQNRPGVLIKINKAFSEKGINIAAQYLQTTAEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D L +L +
Sbjct: 383 EVDTHQAEEALVELKAIDGTLRTRVL 408
>gi|212637153|ref|YP_002313678.1| D-3-phosphoglycerate dehydrogenase [Shewanella piezotolerans WP3]
gi|212558637|gb|ACJ31091.1| D-3-phosphoglycerate dehydrogenase [Shewanella piezotolerans WP3]
Length = 409
Score = 73.5 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI++ + E GINIA +L + + +
Sbjct: 325 VNFPEVSLAQHSGTSRLLHIHRNRPGILIQINLAFAEKGINIAAQYLQTTAEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D + L ++ +
Sbjct: 383 EVDSDKADEALTEMQAIEGTIRTRLLH 409
>gi|253690043|ref|YP_003019233.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251756621|gb|ACT14697.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 410
Score = 73.5 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ V R + ++ + GI+ + I E GINIA +L + + +
Sbjct: 325 VNFPEVSLPVHGARASRLLHIHENRPGIITKINQIFAEQGINIAAQYLQTTPEIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ DG+ + L+ + +
Sbjct: 385 VETDGA--QTALQLMKAIPGTIRARLL 409
>gi|332160385|ref|YP_004296962.1| D-3-phosphoglycerate dehydrogenase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664615|gb|ADZ41259.1| D-3-phosphoglycerate dehydrogenase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 413
Score = 73.5 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGRLM-ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + GI+ + I E +NIA +L S + +
Sbjct: 325 VNFPEVSLPAHGDNTRRLLHIHENRPGILTSINKIFAEQNVNIAAQYLQTSADIGYVVID 384
Query: 69 LCIDG-SILNSVLEKLSVNVTIRFVKQF 95
+ D L+ + +
Sbjct: 385 VETDDAENAEKALQAMKAIPGTIRSRLL 412
>gi|167622663|ref|YP_001672957.1| D-3-phosphoglycerate dehydrogenase [Shewanella halifaxensis
HAW-EB4]
gi|167352685|gb|ABZ75298.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Shewanella halifaxensis HAW-EB4]
Length = 409
Score = 73.5 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI++ + + E GINIA +L + + +
Sbjct: 325 VNFPEVSLAQHSGTSRLLHIHRNRPGILIQINSAFAEKGINIAAQYLQTTAEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D + L +L +
Sbjct: 383 EVDSDQAENALVELQAIEGTIRTRLLH 409
>gi|226312725|ref|YP_002772619.1| hypothetical protein BBR47_31380 [Brevibacillus brevis NBRC 100599]
gi|226095673|dbj|BAH44115.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 170
Score = 73.5 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 36/88 (40%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+I + G + + + D G++ V L EY IN++ ++ R Q ++A+
Sbjct: 83 ISEINYCACRIPPGAHGLLVRHIDYPGVIYDVSRKLAEYQINVSKLNVSREQKGKNALLI 142
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQFE 96
D I +++ + I V +
Sbjct: 143 SVTDEEITPTIVSAIEELPQITKVLSLQ 170
>gi|123443596|ref|YP_001007569.1| D-3-phosphoglycerate dehydrogenase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090557|emb|CAL13426.1| D-3-phosphoglycerate dehydrogenase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318604380|emb|CBY25878.1| D-3-phosphoglycerate dehydrogenase [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 413
Score = 73.5 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGRLM-ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + GI+ + I E +NIA +L S + +
Sbjct: 325 VNFPEVSLPAHGDNTRRLLHIHENRPGILTSINKIFAEQNVNIAAQYLQTSADIGYVVID 384
Query: 69 LCIDG-SILNSVLEKLSVNVTIRFVKQF 95
+ D L+ + +
Sbjct: 385 VETDDAENAEKALQAMKAIPGTIRSRLL 412
>gi|322699487|gb|EFY91248.1| d-3-phosphoglycerate dehydrogenase [Metarhizium acridum CQMa 102]
Length = 1253
Score = 73.5 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 13/99 (13%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR---- 58
SD + K+ N +I + N D G + VG +LG +GINI + +
Sbjct: 465 SDKRVYISKLDCFNATFSPEGTLIILHNYDEPGKIGGVGMVLGSHGINIRYMQVASLDAE 524
Query: 59 ---------SQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
+Q A+ L +DG + V+E L +
Sbjct: 525 ARQGHNTPPTQKDNEALMILGVDGEVDAKVMEGLRKSEA 563
>gi|157960460|ref|YP_001500494.1| D-3-phosphoglycerate dehydrogenase [Shewanella pealeana ATCC
700345]
gi|157845460|gb|ABV85959.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Shewanella pealeana ATCC 700345]
Length = 409
Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI++ + + E GINIA +L + + +
Sbjct: 325 VNFPEVSLAQHSGTSRLLHIHRNRPGILIQINSAFAEKGINIAAQYLQTTAEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D + L ++ +
Sbjct: 383 EVDSDKADEALVEMQAIEGTIRTRLLH 409
>gi|253578120|ref|ZP_04855392.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850438|gb|EES78396.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 387
Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I I + +I ++ ILG G+NIA E+A + + ++ + L++L
Sbjct: 318 RIAICHKNIPNMISQFTKILGAEGLNIADMT--NKSKGEYAYTLIDLESAASREALDELK 375
Query: 85 VNVTIRFVKQFE 96
+ V+ +
Sbjct: 376 AIEGVSRVRVVK 387
>gi|169334391|ref|ZP_02861584.1| hypothetical protein ANASTE_00791 [Anaerofustis stercorihominis DSM
17244]
gi|169259108|gb|EDS73074.1| hypothetical protein ANASTE_00791 [Anaerofustis stercorihominis DSM
17244]
Length = 390
Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E + + ICI++ ++ +V + ++L +NIA+ E+A + +
Sbjct: 303 VNFPECDLGAMVSNARICIIHKNVPNMVGQISSLLASNDVNIANMI--NKSRGENAYTMI 360
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D + + + + L + V+ +
Sbjct: 361 DVDNDVNDYIEKTLKEVEGVTSVRILK 387
>gi|93005240|ref|YP_579677.1| D-3-phosphoglycerate dehydrogenase [Psychrobacter cryohalolentis
K5]
gi|92392918|gb|ABE74193.1| D-3-phosphoglycerate dehydrogenase [Psychrobacter cryohalolentis
K5]
Length = 408
Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ ++ G++ + + E INI L + +
Sbjct: 324 VNFPEVSIPFKEGTHRLLHIHKNVPGVLSQINRLFAEANINILAQSLMT--EGDVGYLVM 381
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + + L++L V+
Sbjct: 382 DVDYNDSTAALDQLKDVQETIRVRIL 407
>gi|294634869|ref|ZP_06713391.1| D-3-phosphoglycerate dehydrogenase [Edwardsiella tarda ATCC 23685]
gi|291091742|gb|EFE24303.1| D-3-phosphoglycerate dehydrogenase [Edwardsiella tarda ATCC 23685]
Length = 412
Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ +++ + + ++ + G++ + I E G+NIA +L + + + +
Sbjct: 325 VNFPQVSLPMHEEHVSRLLHIHENRPGMLKAINQIFAEEGVNIAAQYLQTTPTIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + L+++ +
Sbjct: 385 VETEVERAEAALQRMRAIPGTVRARLL 411
>gi|307717866|ref|YP_003873398.1| hypothetical protein STHERM_c01490 [Spirochaeta thermophila DSM
6192]
gi|306531591|gb|ADN01125.1| hypothetical protein STHERM_c01490 [Spirochaeta thermophila DSM
6192]
Length = 397
Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 4/93 (4%)
Query: 5 GKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + DV I I N +I +V + +LG INI+
Sbjct: 299 GNIRNSVNFPTCQLDVSGD-TRILIANRNIPDMVRQITGVLGSARINISDMI--NKHKGN 355
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + +DG + + + E LS + V+
Sbjct: 356 IAYNIIDVDGEVPSDISEDLSQIEGVIMVRVLR 388
>gi|167998192|ref|XP_001751802.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696900|gb|EDQ83237.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 122
Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
P +K+ N D+ + +I + D G++ VG+ILGE +NIA +GR + AI
Sbjct: 4 PHLLKVGNFNVDMSLEGSIILYRHVDQSGMIEKVGSILGEENVNIAFMSVGRMVRGQDAI 63
Query: 67 SFLCIDGSILNSVLEK 82
D + S+L+K
Sbjct: 64 VAFGTDEELSKSILQK 79
>gi|157377079|ref|YP_001475679.1| D-3-phosphoglycerate dehydrogenase [Shewanella sediminis HAW-EB3]
gi|157319453|gb|ABV38551.1| D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
[Shewanella sediminis HAW-EB3]
Length = 411
Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + G+++ + E GINIA +L + + +
Sbjct: 325 VNFPEVSLAQHKDTSRLLHIHHNQPGVLIQINQAFAEKGINIAAQYLQTTNEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D LE++ +
Sbjct: 383 EVDSDQAEEALEQMKTIDGTIRTRLLH 409
>gi|296534411|ref|ZP_06896858.1| phosphoglycerate dehydrogenase [Roseomonas cervicalis ATCC 49957]
gi|296265263|gb|EFH11441.1| phosphoglycerate dehydrogenase [Roseomonas cervicalis ATCC 49957]
Length = 421
Score = 73.1 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 9/86 (10%), Positives = 24/86 (27%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ V+ ++ G++ + + + +NI +L + +
Sbjct: 333 VNFPEVTLPARPNGTRYMHVHRNVPGVLAAMNEVFSRFSLNIGAQYLQTDPEIGYVVVDA 392
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
VL L +
Sbjct: 393 ENVSD-PEGVLAALRQIPGTLRARLL 417
>gi|254447282|ref|ZP_05060749.1| D-3-phosphoglycerate dehydrogenase [gamma proteobacterium HTCC5015]
gi|198263421|gb|EDY87699.1| D-3-phosphoglycerate dehydrogenase [gamma proteobacterium HTCC5015]
Length = 388
Score = 72.8 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + ++ + + N + +V + ++LG+ G+NI FH+
Sbjct: 299 NGNIVNSVNFPQVQLPRAGE-QRLAVSNLNRPDMVGQISHVLGDAGLNI--FHMVNESRG 355
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + + ID +SV+EKLS + V+
Sbjct: 356 DVAYTLVDIDSQADDSVIEKLSAIDGVLNVRAL 388
>gi|54310221|ref|YP_131241.1| putative D-3-phosphoglycerate dehydrogenase [Photobacterium
profundum SS9]
gi|46914662|emb|CAG21439.1| putative D-3-phosphoglycerate dehydrogenase [Photobacterium
profundum SS9]
Length = 222
Score = 72.8 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I GINIA +L + +
Sbjct: 138 VGFPEVSLPEHRDCSRLLHIHENRPGILNQITTIFASEGINIAAQYLQTGAEIGYV--VI 195
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ L KL +
Sbjct: 196 DVEIERAEEALNKLKAIEGTIRARILH 222
>gi|254480433|ref|ZP_05093680.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain,
putative [marine gamma proteobacterium HTCC2148]
gi|214039016|gb|EEB79676.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain,
putative [marine gamma proteobacterium HTCC2148]
Length = 394
Score = 72.8 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Query: 4 DGKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+G R + ++ + + + + N ++ I+ V +IL + IN+
Sbjct: 301 NGNIRNSVNFPNLSLE-RVSGCRLSVTNENVPKILGSVLSILADENINVIDML--NKSRN 357
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + + + G + VL+K+ + V+
Sbjct: 358 DIAYNLIDVVGHTSDEVLDKMRALEGVVNVRMI 390
>gi|172040439|ref|YP_001800153.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium urealyticum DSM
7109]
gi|171851743|emb|CAQ04719.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium urealyticum DSM
7109]
Length = 530
Score = 72.8 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I + D+ + +V AD G + +G +LG+ G+NIA L + A
Sbjct: 441 KIVRINDRGLDLRAEGTNLFLVYADQTGALGRIGTLLGKQGVNIAAAALSPNTEDGTATL 500
Query: 68 FLCIDGSILNSVLEKLSV 85
L ID + LE ++
Sbjct: 501 VLRIDRVLTEDELEAVNA 518
>gi|327321766|gb|AEA48241.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium glutamicum]
Length = 530
Score = 72.8 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ +I D+ L + + D G + VG LG GINI L +++ + A+
Sbjct: 441 KITRINGRGLDLRAEGLNLFLQYTDAPGALGTVGTKLGAAGINIEAAALTQAEKGDGAVL 500
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
L ++ ++ + +++ + F VD
Sbjct: 501 ILRVESAVSEELEAEINAELGATS-----FQVD 528
>gi|238754582|ref|ZP_04615936.1| D-3-phosphoglycerate dehydrogenase [Yersinia ruckeri ATCC 29473]
gi|238707213|gb|EEP99576.1| D-3-phosphoglycerate dehydrogenase [Yersinia ruckeri ATCC 29473]
Length = 413
Score = 72.8 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 31/88 (35%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGRLM-ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + GI+ + I E INIA +L S + +
Sbjct: 325 VNFPEVSLPAHGDETRRLLHIHENRPGILTSINQIFAEQNINIAAQYLQTSAEIGYVVID 384
Query: 69 LCIDGSI-LNSVLEKLSVNVTIRFVKQF 95
+ + + + L+ + +
Sbjct: 385 VETENVVLVEKALQLMKAIPGTIRARLL 412
>gi|19552504|ref|NP_600506.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium glutamicum ATCC
13032]
gi|62390170|ref|YP_225572.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium glutamicum ATCC
13032]
gi|145295425|ref|YP_001138246.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium glutamicum R]
gi|21324052|dbj|BAB98677.1| Phosphoglycerate dehydrogenase and related dehydrogenases or
D-3-phosphoglycerate dehydrogenase [Corynebacterium
glutamicum ATCC 13032]
gi|41325506|emb|CAF19986.1| Phosphoglycerate Dehydrogenase [Corynebacterium glutamicum ATCC
13032]
gi|140845345|dbj|BAF54344.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 530
Score = 72.8 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ +I D+ L + + D G + VG LG GINI L +++ + A+
Sbjct: 441 KITRINGRGLDLRAEGLNLFLQYTDAPGALGTVGTKLGAAGINIEAAALTQAEKGDGAVL 500
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFNVD 100
L ++ ++ + +++ + F VD
Sbjct: 501 ILRVESAVSEELEAEINAELGATS-----FQVD 528
>gi|269101829|ref|ZP_06154526.1| D-3-phosphoglycerate dehydrogenase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161727|gb|EEZ40223.1| D-3-phosphoglycerate dehydrogenase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 409
Score = 72.8 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I + GINIA L + +
Sbjct: 325 VGFPEVSLPEQRECSRLLHIHQNRPGILNQITAIFADDGINIAAQFLQTGPEIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ L+KL +
Sbjct: 383 DVETEHAPQALQKLKAIEGTIRARILH 409
>gi|154498768|ref|ZP_02037146.1| hypothetical protein BACCAP_02759 [Bacteroides capillosus ATCC
29799]
gi|150272158|gb|EDM99362.1| hypothetical protein BACCAP_02759 [Bacteroides capillosus ATCC
29799]
Length = 389
Score = 72.8 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+CI++ +I G + + +L + +N+ + ++A + + I+ I + V++++
Sbjct: 319 RLCIIHRNIPGAIANITKVLSDDNVNVENMT--NKSKKDYAYTVVDINAKIRDDVVDEIR 376
Query: 85 VNVTIRFVKQFE 96
+ V+
Sbjct: 377 ALEGVLRVRLLS 388
>gi|325263852|ref|ZP_08130585.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Clostridium sp. D5]
gi|324030890|gb|EGB92172.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Clostridium sp. D5]
Length = 387
Score = 72.8 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + I I++ +I ++ +L + +NI+
Sbjct: 296 NGNITHSVNYPDCDMGQKGEGSRITILHHNIPNMLGQFTALLAKEKLNISLM--ANKSKK 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E+A + + +DG + +V ++LS + ++
Sbjct: 354 EYAYTMIDVDGDVSQAVKDELSSIEGVLKIRVI 386
>gi|291543519|emb|CBL16628.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Ruminococcus sp. 18P13]
Length = 387
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ N ++ +C+++ ++ I+ + + LG+ G NI + + +
Sbjct: 299 GNIINSVNFP--NAEMHANGTKLCVLHKNVPTIIAQITSALGDAGKNIDNMV--NASKKD 354
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+A + + + G + +S+++ + + V+
Sbjct: 355 NAYTMIDVAGDVADSIVDTVKAIDGVIRVRVI 386
>gi|251794013|ref|YP_003008745.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter aphrophilus
NJ8700]
gi|247535412|gb|ACS98658.1| D-3-phosphoglycerate dehydrogenase (pgdh) [Aggregatibacter
aphrophilus NJ8700]
Length = 410
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + G + ++ + G++ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPENEGSKRLLHIHENRPGVLNKINQIFVEANVNIAAQYLQTDPKIGYVVIDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + +L KL +
Sbjct: 386 ETDDATP--LLAKLREIDGTIRTRVL 409
>gi|91794446|ref|YP_564097.1| D-3-phosphoglycerate dehydrogenase [Shewanella denitrificans OS217]
gi|91716448|gb|ABE56374.1| D-3-phosphoglycerate dehydrogenase [Shewanella denitrificans OS217]
Length = 409
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + G+++ + E GINIA +L + + +
Sbjct: 325 VNFPEVSLPQHKGTSRLLHIHHNRPGVLIKINQAFSEKGINIAAQYLQTTAVIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D L +L +
Sbjct: 383 EVDSDQAEEALVELKAIDGTIRTRVL 408
>gi|114048793|ref|YP_739343.1| D-3-phosphoglycerate dehydrogenase [Shewanella sp. MR-7]
gi|113890235|gb|ABI44286.1| D-3-phosphoglycerate dehydrogenase [Shewanella sp. MR-7]
Length = 409
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + G + ++ + G+++ + E GINIA +L + + +
Sbjct: 325 VNFPEVSLPMHKGISRLLHIHQNRPGVLIKINKAFSEKGINIAAQYLQTTAEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D L +L +
Sbjct: 383 EVDTHQAEEALVELKAIEGTLRTRVL 408
>gi|70989461|ref|XP_749580.1| D-3-phosphoglycerate dehydrogenase [Aspergillus fumigatus Af293]
gi|66847211|gb|EAL87542.1| D-3-phosphoglycerate dehydrogenase [Aspergillus fumigatus Af293]
Length = 635
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 14/109 (12%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL------ 56
S +P ++ ++ N D G + VG++LG+ +NI +
Sbjct: 527 SGDQPLINRLGRFETSFVPEGTLLICENYDSPGKIGAVGSLLGQERVNINFMTVAPVSRK 586
Query: 57 -----GRSQSTE---HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
G + A+ L ID + V + L +
Sbjct: 587 LAFASGATDDGGSKHEALMILGIDKVVDQRVADGLIKGGGVLSASVISL 635
>gi|197301799|ref|ZP_03166869.1| hypothetical protein RUMLAC_00525 [Ruminococcus lactaris ATCC
29176]
gi|197299239|gb|EDY33769.1| hypothetical protein RUMLAC_00525 [Ruminococcus lactaris ATCC
29176]
Length = 373
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + N V I I++ +I ++ +L + +NIA
Sbjct: 282 NGNITHSVNYPDCNVGVRGDAERITILHKNIPNMIGQFTTLLAQEDLNIALMT--NKSRK 339
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E+A + + +DG + + V K+ + V+
Sbjct: 340 EYAYTVIDVDGIVSDEVAAKIKGVSGVLGVRVIR 373
>gi|120597635|ref|YP_962209.1| D-3-phosphoglycerate dehydrogenase [Shewanella sp. W3-18-1]
gi|146294226|ref|YP_001184650.1| D-3-phosphoglycerate dehydrogenase [Shewanella putrefaciens CN-32]
gi|120557728|gb|ABM23655.1| D-3-phosphoglycerate dehydrogenase [Shewanella sp. W3-18-1]
gi|145565916|gb|ABP76851.1| D-3-phosphoglycerate dehydrogenase [Shewanella putrefaciens CN-32]
gi|319427570|gb|ADV55644.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Shewanella putrefaciens 200]
Length = 409
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + G+++ + E GINIA +L + + +
Sbjct: 325 VNFPEVSLPTHKGTSRLLHIHQNRPGVLIKINQAFSEKGINIAAQYLQTTAEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + L +L +
Sbjct: 383 EVDTTQAEEALVELKAIEGTLRTRVL 408
>gi|330859852|emb|CBX70183.1| D-3-phosphoglycerate dehydrogenase [Yersinia enterocolitica W22703]
Length = 214
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGRLM-ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + GI+ + I E +NIA +L S + +
Sbjct: 126 VNFPEVSLPAHGDNTRRLLHIHENRPGILTSINKIFAEQNVNIAAQYLQTSADIGYVVID 185
Query: 69 LCIDG-SILNSVLEKLSVNVTIRFVKQF 95
+ D L+ + +
Sbjct: 186 VETDDAENAEKALQAMKAIPGTIRSRLL 213
>gi|125975514|ref|YP_001039424.1| D-3-phosphoglycerate dehydrogenase [Clostridium thermocellum ATCC
27405]
gi|256004198|ref|ZP_05429181.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Clostridium thermocellum DSM 2360]
gi|281419453|ref|ZP_06250467.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Clostridium thermocellum JW20]
gi|125715739|gb|ABN54231.1| D-3-phosphoglycerate dehydrogenase [Clostridium thermocellum ATCC
27405]
gi|255991788|gb|EEU01887.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Clostridium thermocellum DSM 2360]
gi|281406859|gb|EFB37123.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Clostridium thermocellum JW20]
gi|316939634|gb|ADU73668.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Clostridium thermocellum DSM 1313]
Length = 391
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 30/87 (34%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + + + +I + + +++ GINI + L
Sbjct: 305 VNFPNCELPYTGN-VRVIVAHDNIPNMFGQITSLIARNGINIGDMISKHKDKIG--YTIL 361
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ I + ++E + +R V+
Sbjct: 362 NVEREISDEIVENIRAIEGVRMVRVIN 388
>gi|15805524|ref|NP_294220.1| L-serine dehydratase subunit beta [Deinococcus radiodurans R1]
gi|6458183|gb|AAF10074.1|AE001908_9 L-serine dehydratase, beta subunit [Deinococcus radiodurans R1]
Length = 238
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 35/93 (37%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G ++Q + + + + D +G++ + + + G+NIA R+
Sbjct: 140 GGGVILVTQVQGLGVNFSGASPTLLLRYTDAVGMIARIASSIAAAGVNIAALTCTRAARG 199
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ + +D L ++ + +V+
Sbjct: 200 GQALLAIELDAPPSPEALSFIASWQDVNWVRLL 232
>gi|229008779|ref|ZP_04166170.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
mycoides Rock1-4]
gi|228752491|gb|EEM02128.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
mycoides Rock1-4]
Length = 219
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 41/92 (44%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
GK + I+I + +++ R + I+N D G + V +IL INI + + + +
Sbjct: 128 GKIKVIEINGFDLNLNETRSALLIMNNDHFGTISSVTSILATRKININMIRVSQKEKGKI 187
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + + + + V+E++ I
Sbjct: 188 SLLVIETEELLNHEVIEEIKGLPKIYQTLVLS 219
>gi|296140550|ref|YP_003647793.1| D-3-phosphoglycerate dehydrogenase [Tsukamurella paurometabola DSM
20162]
gi|296028684|gb|ADG79454.1| D-3-phosphoglycerate dehydrogenase [Tsukamurella paurometabola DSM
20162]
Length = 528
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ I NFD+ L + + D G + +G +LG+ GI+I L +
Sbjct: 434 GQVQKVTNINGRNFDLRAEGLNLYVAYPDQPGSLGKLGTVLGDAGIDIQAAALSQDAEGN 493
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
A L + + V +K+S + + ++
Sbjct: 494 GATVLLRVSQPVPADVQQKIS--DAVSATTVVQVDL 527
>gi|184201703|ref|YP_001855910.1| D-3-phosphoglycerate dehydrogenase [Kocuria rhizophila DC2201]
gi|183581933|dbj|BAG30404.1| D-3-phosphoglycerate dehydrogenase [Kocuria rhizophila DC2201]
Length = 398
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ D I + V++++ G++ V ++LGE+GIN+ L
Sbjct: 314 VNFPEVQLDPTIHGTRLLHVHSNVPGVLARVNSVLGEHGINVDRQQLVTKAQMG--YLVT 371
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ V+ + V
Sbjct: 372 DCGNGVTEDVVAAVKALPETVRVATVS 398
>gi|113969062|ref|YP_732855.1| D-3-phosphoglycerate dehydrogenase [Shewanella sp. MR-4]
gi|113883746|gb|ABI37798.1| D-3-phosphoglycerate dehydrogenase [Shewanella sp. MR-4]
Length = 409
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + G + ++ + G+++ + E GINIA +L + + +
Sbjct: 325 VNFPEVSLPMHKGISRLLHIHQNRPGVLIKINKAFSEKGINIAAQYLQTTAEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D L +L +
Sbjct: 383 EVDTHQAEEALVELKAIEGTLRTRVL 408
>gi|117921853|ref|YP_871045.1| D-3-phosphoglycerate dehydrogenase [Shewanella sp. ANA-3]
gi|117614185|gb|ABK49639.1| D-3-phosphoglycerate dehydrogenase [Shewanella sp. ANA-3]
Length = 409
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + G + ++ + G+++ + E GINIA +L + + +
Sbjct: 325 VNFPEVSLPMHKGISRLLHIHQNRPGVLIKINKAFSEKGINIAAQYLQTTAEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D L +L +
Sbjct: 383 EVDTHQAEEALVELKAIEGTLRTRVL 408
>gi|320540104|ref|ZP_08039759.1| putative D-3-phosphoglycerate dehydrogenase [Serratia symbiotica
str. Tucson]
gi|320029770|gb|EFW11794.1| putative D-3-phosphoglycerate dehydrogenase [Serratia symbiotica
str. Tucson]
Length = 412
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 29/87 (33%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + G++ + I E G+NIA +L + +
Sbjct: 325 VNFPEVSLPAHGPNASRLLHIHQNRPGVLTQINQIFAEEGVNIAAQYLQTGSEIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + L ++ +
Sbjct: 385 IEAEIERAGIALRRMKAIEGTIRTRLL 411
>gi|209547232|ref|YP_002279150.1| D-3-phosphoglycerate dehydrogenase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538476|gb|ACI58410.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 412
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 25/86 (29%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + GI+ + I G+NI L + + +
Sbjct: 326 VNFPQVQLPPRPNGTRFIHVHENRPGILNSLNTIFSSRGLNIVGEFLQTHGEMGYVVIEV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G + +L L +
Sbjct: 386 EGVGQTADDILNALRQIPGTIRARLV 411
>gi|255324581|ref|ZP_05365698.1| phosphoglycerate dehydrogenase [Corynebacterium tuberculostearicum
SK141]
gi|255298487|gb|EET77787.1| phosphoglycerate dehydrogenase [Corynebacterium tuberculostearicum
SK141]
Length = 528
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 35/82 (42%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG +FI+I D+ + AD G + VG LG GINI L +
Sbjct: 434 DGTEKFIRINGRGVDMRATGRNLFFRYADAPGALGTVGTKLGAAGINIVAAALTHGKQES 493
Query: 64 HAISFLCIDGSILNSVLEKLSV 85
A+ L ++ + ++ +++
Sbjct: 494 DAVLILRVEAEVPEHLIAEINA 515
>gi|296127086|ref|YP_003634338.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Brachyspira murdochii DSM 12563]
gi|296018902|gb|ADG72139.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Brachyspira murdochii DSM 12563]
Length = 224
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G K+ I I IVN DI GI+ V +I+ E INI + ++
Sbjct: 125 GGGLIVLDKVNGIEVHYKGDFPTIAIVNKDIPGIIAQVTSIIFENDINIENMNVTPQFEG 184
Query: 63 ---EHAISFLCIDGSILNSVLEKLSVNVTIRF 91
+AI + + I + EK+ IR
Sbjct: 185 PNKGYAIIVIGMTDVISKEIEEKIRSIKNIRD 216
>gi|281356516|ref|ZP_06243008.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Victivallis vadensis ATCC BAA-548]
gi|281317208|gb|EFB01230.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Victivallis vadensis ATCC BAA-548]
Length = 524
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 4 DGKPRFIKIQEIN-FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ ++ + + ++ + + D G++ + ILGE INI + +
Sbjct: 428 ENNLMISRLNDFDQLYLEPSGHHLFVEYKDEPGVIGRIAGILGEKNINIIDIRAPQDLKS 487
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+++ + + + + +++K+ ++ K F+F
Sbjct: 488 GLSLTVVKTNVEVPDMLIQKIR--EAVKASKAFQF 520
>gi|52425798|ref|YP_088935.1| D-3-phosphoglycerate dehydrogenase [Mannheimia succiniciproducens
MBEL55E]
gi|52307850|gb|AAU38350.1| SerA protein [Mannheimia succiniciproducens MBEL55E]
Length = 410
Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ I ++ + GI+ + + + INIA +L + +
Sbjct: 326 VNFPEVSLPEHRTAKRILHIHHNRPGILNKINQVFVDENINIAAQYLQTDAKIGYV--VI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ +L+KL +
Sbjct: 384 DVETDDSTDLLQKLKSIEGTIRARVL 409
>gi|258546197|ref|ZP_05706431.1| D-3-phosphoglycerate dehydrogenase [Cardiobacterium hominis ATCC
15826]
gi|258518622|gb|EEV87481.1| D-3-phosphoglycerate dehydrogenase [Cardiobacterium hominis ATCC
15826]
Length = 404
Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ + G++ V ++ E+GINIA L E +
Sbjct: 320 VNFPEVSLPLREDTHRLLHIHRNQPGVLSAVNHLFAEHGINIAAQTLIT--KGEIGYLVM 377
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ S LE+L +
Sbjct: 378 DVAHSDSQVALEQLKSVAGTIRSRII 403
>gi|210612258|ref|ZP_03289206.1| hypothetical protein CLONEX_01406 [Clostridium nexile DSM 1787]
gi|210151632|gb|EEA82639.1| hypothetical protein CLONEX_01406 [Clostridium nexile DSM 1787]
Length = 387
Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Query: 4 DGKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+G R + + G+ I I++ ++ ++ +L E G+NI+
Sbjct: 296 NGNIRNSVNYPNCDMGYRDGKTRITILHHNVPNMIGQFTTLLAEAGVNISDMT--NKSKK 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E+A + + I+G + + EKL + V+ E
Sbjct: 354 EYAYTMIDIEGGLNEEIKEKLGTIKDVLRVRVIE 387
>gi|91775077|ref|YP_544833.1| D-3-phosphoglycerate dehydrogenase [Methylobacillus flagellatus KT]
gi|91709064|gb|ABE48992.1| D-3-phosphoglycerate dehydrogenase [Methylobacillus flagellatus KT]
Length = 410
Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ ++ G++ V ++ INIA + + +
Sbjct: 326 VNFPEVSIPKQPGTHRLLHIHRNVPGVLSAVNSLFARNNINIAAQSMMT--KGDIGYMIM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ S ++ +E L +
Sbjct: 384 DVEASASSAAIEALQTVEGTLRTRVL 409
>gi|329917244|ref|ZP_08276463.1| D-3-phosphoglycerate dehydrogenase [Oxalobacteraceae bacterium
IMCC9480]
gi|327544579|gb|EGF30064.1| D-3-phosphoglycerate dehydrogenase [Oxalobacteraceae bacterium
IMCC9480]
Length = 410
Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + G+ + ++ ++ G++ + I E GINI+ L ++S +
Sbjct: 326 VNFPEVVVPLFGGKHRLLHIHRNVPGVLSAINRIFAENGINISAQSLMTNESIG--YLVM 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ +EKL +
Sbjct: 384 DVPMGCSTVAMEKLHEIEGTIRTRVL 409
>gi|171850955|emb|CAQ00040.1| D-3-phosphoglycerate dehydrogenase [Rhodococcus erythropolis]
Length = 271
Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 36/76 (47%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I +FD+ I + +D G++ +G +LG G++I L + E A
Sbjct: 182 KIVNINGRSFDLRAEGHNIVVHYSDRPGVLGVLGTVLGNAGVDILAAALSQDAEGEGATV 241
Query: 68 FLCIDGSILNSVLEKL 83
L +D + ++ +E +
Sbjct: 242 ILRVDRVVGDAEVEAI 257
>gi|56461204|ref|YP_156485.1| D-3-phosphoglycerate dehydrogenase [Idiomarina loihiensis L2TR]
gi|56180214|gb|AAV82936.1| D-3-phosphoglycerate dehydrogenase [Idiomarina loihiensis L2TR]
Length = 408
Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + G++ + I+ + IN+ +L ++ + +
Sbjct: 324 VNFPEVSLPTHATAQRLLHIHKNQPGMLNAINRIISDNEINVVGQYLQTDENVGYV--VM 381
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID VL++L ++
Sbjct: 382 DIDSDNGADVLQQLKDIPGTIRARRL 407
>gi|149908680|ref|ZP_01897341.1| phosphoglycerate dehydrogenase [Moritella sp. PE36]
gi|149808222|gb|EDM68161.1| phosphoglycerate dehydrogenase [Moritella sp. PE36]
Length = 409
Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + E G+NI+ +L + + +
Sbjct: 325 VNFPEVSLPGHAGSSRLMHIHQNQPGILNQITQAFAEEGVNISGQYL--QTAGDIGYVVI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ L KL +
Sbjct: 383 DVESEHAERGLAKLKSISGTIRSRLLR 409
>gi|124010070|ref|ZP_01694731.1| D-3-phosphoglycerate dehydrogenase [Microscilla marina ATCC 23134]
gi|123983893|gb|EAY24293.1| D-3-phosphoglycerate dehydrogenase [Microscilla marina ATCC 23134]
Length = 631
Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I + V+ ++ GI+ + IL + +NI +L ++ + I+
Sbjct: 547 VNFPNIQLPEQRNAHRLIHVHENVPGILAKINTILNRHEVNILGQYLKTNEKLGYVIT-- 604
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ ++ ++ +
Sbjct: 605 DVNKEYDKELINEMRAIPHTIKFRPL 630
>gi|254495393|ref|ZP_05108317.1| D-isomer specific 2-hydroxyacid dehydrogenase [Polaribacter sp.
MED152]
gi|85819748|gb|EAQ40905.1| D-isomer specific 2-hydroxyacid dehydrogenase [Polaribacter sp.
MED152]
Length = 630
Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S + I ++ + G++ + IL +Y +NI +L
Sbjct: 539 SGNTVDAVNFPNIRLPRQTDAHRFLHIHKNKSGVMAKINEILAQYDLNITGQYLSTDPKV 598
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ I+ +D V++KL +
Sbjct: 599 GYVIT--DLDKEYNKEVIDKLRNVDGTIKFRVL 629
>gi|159128988|gb|EDP54102.1| D-3-phosphoglycerate dehydrogenase [Aspergillus fumigatus A1163]
Length = 584
Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 14/109 (12%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL------ 56
S +P ++ ++ N D G + VG++LG+ +NI +
Sbjct: 476 SGDQPLINRLGRFETSFVPEGTLLICENYDSPGKIGAVGSLLGQERVNINFMTVAPVSRK 535
Query: 57 -----GRSQSTE---HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
G + A+ L ID + V + L +
Sbjct: 536 LAFASGATDDGGSKHEALMILGIDKVVDQRVADGLIKGGGVLSASVISL 584
>gi|313899970|ref|ZP_07833470.1| putative phosphoglycerate dehydrogenase [Clostridium sp. HGF2]
gi|312955022|gb|EFR36690.1| putative phosphoglycerate dehydrogenase [Clostridium sp. HGF2]
Length = 388
Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 34/93 (36%), Gaps = 3/93 (3%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + ++ + ICI+N ++ +V + L G+NI + +
Sbjct: 296 GNITHSVNLPDMQL-AQECKYRICIINKNVPNVVGAITTALANVGVNIENM--ANKGKKD 352
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+A L + + ++E+L I +
Sbjct: 353 YAYMILDTNDEVSEELMERLRSREGIINARLIT 385
>gi|291550283|emb|CBL26545.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Ruminococcus torques L2-14]
Length = 387
Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + N + I I++ ++ ++ +L + NIA
Sbjct: 296 NGNITHSVNYPDCNVGTKVDGDRITILHRNVPNMIGQFTTLLAQENQNIALMT--NKSKK 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E+A + + +DGS+ + V+ KL + V+ +
Sbjct: 354 EYAYTVIDVDGSVSDEVVSKLESIADVLGVRVIK 387
>gi|127514124|ref|YP_001095321.1| D-3-phosphoglycerate dehydrogenase [Shewanella loihica PV-4]
gi|126639419|gb|ABO25062.1| D-3-phosphoglycerate dehydrogenase [Shewanella loihica PV-4]
Length = 409
Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI++ + E GINIA +L + + +
Sbjct: 325 VNFPEVSLAQHKDTSRLLHIHHNRPGILIKINQAFAEKGINIAAQYLQTTAEIGYV--VM 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + LE++ +
Sbjct: 383 EVNSDQADEALEEMKAIDGTIRTRLLH 409
>gi|113460268|ref|YP_718326.1| D-3-phosphoglycerate dehydrogenase [Haemophilus somnus 129PT]
gi|112822311|gb|ABI24400.1| D-3-phosphoglycerate dehydrogenase [Haemophilus somnus 129PT]
Length = 410
Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I E INIA +L + +
Sbjct: 326 VNFPEVSLPEHSNAKRLLHIHHNRPGILNKINQIFVEQNINIAAEYLQTEAKIGYV--VI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ +L KL +
Sbjct: 384 DVETEDTAQLLAKLKQIEGTIRARVL 409
>gi|170718308|ref|YP_001785321.1| D-3-phosphoglycerate dehydrogenase [Haemophilus somnus 2336]
gi|168826437|gb|ACA31808.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Haemophilus somnus 2336]
Length = 410
Score = 71.6 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + GI+ + I E INIA +L + +
Sbjct: 326 VNFPEVSLPEHSNAKRLLHIHHNRPGILNKINQIFVEQNINIAAEYLQTEAKIGYV--VI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ +L KL +
Sbjct: 384 DVETEDTAQLLAKLKQIEGTIRARVL 409
>gi|313887734|ref|ZP_07821416.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846343|gb|EFR33722.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Peptoniphilus harei ACS-146-V-Sch2b]
Length = 222
Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 33/94 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + + I I D D + + G++ V IL + NI + + + T
Sbjct: 128 GGGNMKIVDINGIQVDYDGKFPTLLFQYPEQKGVIADVSTILAKESYNIESINTSKDELT 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ +D SVL KL N K E
Sbjct: 188 NIVTLTVELDEGASESVLNKLLNNSRYITSKYVE 221
>gi|167757103|ref|ZP_02429230.1| hypothetical protein CLORAM_02652 [Clostridium ramosum DSM 1402]
gi|237735826|ref|ZP_04566307.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|167703278|gb|EDS17857.1| hypothetical protein CLORAM_02652 [Clostridium ramosum DSM 1402]
gi|229381571|gb|EEO31662.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 387
Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + +N + + +CI+N ++ I+ + + ++ +NI +
Sbjct: 296 NGNIINSVNFPGVN-QARMSKTRLCIINKNVPNILANISKLFADHNLNIENMV--NRSRG 352
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E+A + + + + ++E++ I V+
Sbjct: 353 EYAYTLIDTNDEVRPDIIERIESANGIINVRAI 385
>gi|226305887|ref|YP_002765847.1| D-3-phosphoglycerate dehydrogenase [Rhodococcus erythropolis PR4]
gi|229493419|ref|ZP_04387208.1| phosphoglycerate dehydrogenase [Rhodococcus erythropolis SK121]
gi|226185004|dbj|BAH33108.1| D-3-phosphoglycerate dehydrogenase [Rhodococcus erythropolis PR4]
gi|229319735|gb|EEN85567.1| phosphoglycerate dehydrogenase [Rhodococcus erythropolis SK121]
Length = 530
Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 36/76 (47%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I +FD+ I + +D G++ +G +LG G++I L + E A
Sbjct: 441 KIVNINGRSFDLRAEGHNIVVHYSDRPGVLGVLGTVLGNAGVDILAAALSQDAEGEGATV 500
Query: 68 FLCIDGSILNSVLEKL 83
L +D + ++ +E +
Sbjct: 501 ILRVDRVVGDAEVEAI 516
>gi|261416777|ref|YP_003250460.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Fibrobacter succinogenes subsp. succinogenes S85]
gi|261373233|gb|ACX75978.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Fibrobacter succinogenes subsp. succinogenes S85]
gi|302327640|gb|ADL26841.1| putative D-3-phosphoglycerate dehydrogenase [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 388
Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ ++N D+ ++ + + G GINIA F + + + + ++ + +S++EKLS
Sbjct: 318 RVVVINQDVPNMISEITKVFGAEGINIASF--SNKSNGKIGYNLVDVESKVDDSIVEKLS 375
Query: 85 VNVTIRFVKQFEF 97
+ V+ F
Sbjct: 376 KLDKVIKVRVIHF 388
>gi|153870715|ref|ZP_02000057.1| D-3-phosphoglycerate dehydrogenase [Beggiatoa sp. PS]
gi|152072816|gb|EDN69940.1| D-3-phosphoglycerate dehydrogenase [Beggiatoa sp. PS]
Length = 387
Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + + +VN+++ G++ + + +NIA L + A + +
Sbjct: 305 VNFPDMEMPRNG-GHRLLVVNSNVPGMIERISTAIANANLNIAD--LLNRSRSNIACTLV 361
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D +I SV+++L + V+
Sbjct: 362 DVDSAIPQSVIDELKTKEGVLTVQTL 387
>gi|172057700|ref|YP_001814160.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Exiguobacterium sibiricum 255-15]
gi|171990221|gb|ACB61143.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Exiguobacterium sibiricum 255-15]
Length = 385
Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 5 GKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + + R + I + +I +V + ++L INIA+ G
Sbjct: 296 GNIRNAVNFPSVELPYAGKR-RLTIAHQNIPNMVGQIASVLATEQINIANMING--SKDG 352
Query: 64 HAISFLCIDGSILNSV-LEKLSVNVTIRFVKQF 95
A + + ID + ++ LE+L+ + +
Sbjct: 353 IAYTIIDIDNHLDETISLEQLNAIPGVLKTRLL 385
>gi|207110944|ref|ZP_03245106.1| D-3-phosphoglycerate dehydrogenase [Helicobacter pylori
HPKX_438_CA4C1]
Length = 75
Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
VF + + +I + D++ M+ N DI G++ VGN +GINIA F LGR+
Sbjct: 9 VFEEDILKLTEIDGFHIDIEPKGKMLLFRNTDIPGVIGSVGNAFARHGINIADFRLGRNT 68
Query: 61 STE 63
E
Sbjct: 69 QKE 71
>gi|329894934|ref|ZP_08270733.1| D-3-phosphoglycerate dehydrogenase [gamma proteobacterium IMCC3088]
gi|328922663|gb|EGG29998.1| D-3-phosphoglycerate dehydrogenase [gamma proteobacterium IMCC3088]
Length = 395
Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + I + N ++ I+ V ++L + IN+A E A + +
Sbjct: 308 VNFPSLSLERT-AGCRISVTNNNVPKILGSVLSVLADADINVADML--NKSRGELAYNLI 364
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ S L ++ + V+
Sbjct: 365 DVETCPDESTLARIQSIEGVVNVRLI 390
>gi|154250150|ref|YP_001410975.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Fervidobacterium nodosum Rt17-B1]
gi|154154086|gb|ABS61318.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Fervidobacterium nodosum Rt17-B1]
Length = 220
Score = 71.2 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + KI + + + IVN D G + + + + NIA+ +L R +
Sbjct: 122 GGGAIKITKINGVECQLTGDFPTLVIVNKDKPGALKDILDCI---KTNIANVYLRRINAL 178
Query: 63 E-HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
+ A++ + +D + + VL+ L + V
Sbjct: 179 QAIALTIIELDENASDDVLKCLKNLNNVLEVYNVRIE 215
>gi|238759302|ref|ZP_04620468.1| D-3-phosphoglycerate dehydrogenase [Yersinia aldovae ATCC 35236]
gi|238702463|gb|EEP95014.1| D-3-phosphoglycerate dehydrogenase [Yersinia aldovae ATCC 35236]
Length = 413
Score = 71.2 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 27/87 (31%), Gaps = 2/87 (2%)
Query: 11 KIQEINFDVDIGRLM-ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
E++ + ++ + GI+ + I E +NIA +L S + + +
Sbjct: 326 NFPEVSLPAHGDNTRRLLHIHENRPGILTSINKIFAEQNVNIAAQYLQTSAEIGYVVIDV 385
Query: 70 CIDG-SILNSVLEKLSVNVTIRFVKQF 95
D L + +
Sbjct: 386 ETDDAENAEKALLAMKAIPGTIRARLL 412
>gi|227496628|ref|ZP_03926904.1| D-3-phosphoglycerate dehydrogenase [Actinomyces urogenitalis DSM
15434]
gi|226833861|gb|EEH66244.1| D-3-phosphoglycerate dehydrogenase [Actinomyces urogenitalis DSM
15434]
Length = 394
Score = 71.2 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Query: 4 DGKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
DG+ + E + G + IVN ++ +V V I+ + G NIA+ L
Sbjct: 300 DGQIHNSVNFPEAVMAREPGTFRLLIVNKNVPNMVGQVSTIVAQRGHNIAN--LLNRSRG 357
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E A++ + +DG + E++ ++ V
Sbjct: 358 ELAVTLVDVDGEADAQLAEEVRGIDGVQSVSLI 390
>gi|300781348|ref|ZP_07091202.1| phosphoglycerate dehydrogenase [Corynebacterium genitalium ATCC
33030]
gi|300533055|gb|EFK54116.1| phosphoglycerate dehydrogenase [Corynebacterium genitalium ATCC
33030]
Length = 527
Score = 70.8 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 32/78 (41%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I D+ + + D G + VG LGE+ INI L +S + A
Sbjct: 438 KIVRINGRGVDMRAEGRNLFLSYTDQPGALGKVGFQLGEHDINIEAAALTQSAKDDGAFL 497
Query: 68 FLCIDGSILNSVLEKLSV 85
L ++ + + ++
Sbjct: 498 ILRVESEVPADLEASVAK 515
>gi|148981100|ref|ZP_01816293.1| D-3-phosphoglycerate dehydrogenase [Vibrionales bacterium SWAT-3]
gi|145961003|gb|EDK26327.1| D-3-phosphoglycerate dehydrogenase [Vibrionales bacterium SWAT-3]
Length = 76
Score = 70.8 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ ++ + GI+ + I E GINIA +L + + + ++ L KL
Sbjct: 7 RLLHIHQNRPGILTQINTIFAEEGINIAGQYLQTAADMGYV--VIDVEADRSEEALLKLK 64
Query: 85 VNVTIRFVKQFE 96
+
Sbjct: 65 EIEGTIRARLLH 76
>gi|284035994|ref|YP_003385924.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Spirosoma linguale DSM 74]
gi|283815287|gb|ADB37125.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Spirosoma linguale DSM 74]
Length = 634
Score = 70.8 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + G + ++A++ GI+ + I +Y INI +L ++ + I+
Sbjct: 550 VNFPELQLPLLKGAHRLLHIHANVPGILAKMNTIFAKYHINIHGQYLKTNEKIGYVIT-- 607
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + V+E+L +
Sbjct: 608 DVAKEYADEVVEELKGIDNTIKFRLL 633
>gi|260577503|ref|ZP_05845445.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium jeikeium ATCC
43734]
gi|258604372|gb|EEW17607.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium jeikeium ATCC
43734]
Length = 529
Score = 70.8 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 34/90 (37%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I D+ + +V D G + VG +LG GINI L + + A
Sbjct: 440 KIVRINHRGLDLRATGTNLFLVYPDQPGALGKVGTLLGNKGINIDAAALSPTDDEQTATL 499
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L + + ++E++ +
Sbjct: 500 VLRVSEELDQQLVEEVKAELNASNAFVLNL 529
>gi|325675891|ref|ZP_08155575.1| phosphoglycerate dehydrogenase [Rhodococcus equi ATCC 33707]
gi|325553862|gb|EGD23540.1| phosphoglycerate dehydrogenase [Rhodococcus equi ATCC 33707]
Length = 530
Score = 70.8 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 35/76 (46%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I +FD+ I + D G++ +G +LG GI+I L + E A
Sbjct: 441 KIVNINGRSFDLRAEGHNIVVHYTDRPGVLGVLGTVLGTAGIDIQAAALSQDAEGEGATV 500
Query: 68 FLCIDGSILNSVLEKL 83
L +D + ++ + ++
Sbjct: 501 ILRVDRVVGDAEVAQI 516
>gi|257871069|ref|ZP_05650722.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
gallinarum EG2]
gi|257805233|gb|EEV34055.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
gallinarum EG2]
Length = 394
Score = 70.8 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R + + + ++N ++ ++ + +I+ E GINI + ++A +
Sbjct: 300 RSVNFPTVEMAFH-SPYRLTVINRNVPNMLGQISSIIAESGINIDNML--NRGRDDYAYT 356
Query: 68 FLCI---DGSILNSVLEKLSVNVTIRFVKQFE 96
+ + D ++L +V +KL I V+ +
Sbjct: 357 LVDVGATDAALLEAVADKLRAKEDIIRVRVIK 388
>gi|320353061|ref|YP_004194400.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Desulfobulbus propionicus DSM 2032]
gi|320121563|gb|ADW17109.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Desulfobulbus propionicus DSM 2032]
Length = 400
Score = 70.8 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 9/100 (9%)
Query: 4 DGKPRFIKIQEIN----FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRS 59
+ I DV + ++N D G++ + NILG INI +
Sbjct: 301 GNIVHSVNFPNIETIPTVDV---HTRLTVINRDQPGMIGMISNILGAERINI--MNYTNK 355
Query: 60 QSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ + + G + V K++ + V+ +
Sbjct: 356 SNGTVGYNIIDCAGPVSEEVQTKIAQQDGVLRVRVIPLEI 395
>gi|223985207|ref|ZP_03635292.1| hypothetical protein HOLDEFILI_02598 [Holdemania filiformis DSM
12042]
gi|223962824|gb|EEF67251.1| hypothetical protein HOLDEFILI_02598 [Holdemania filiformis DSM
12042]
Length = 387
Score = 70.8 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 37/93 (39%), Gaps = 4/93 (4%)
Query: 4 DGKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+G R + + ++ + +C + ++ ++ + ++ + GINI + L
Sbjct: 297 NGNIRNAVNLPDVVMERSGQA-RLCCFHRNVPNMLAHISGMISKQGINIEN--LLNRSQG 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E A + + +D + + L I V+
Sbjct: 354 EFAYTLVDVDTPAVEKIAATLRQQPEILRVRVL 386
>gi|315634902|ref|ZP_07890184.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter segnis ATCC
33393]
gi|315476454|gb|EFU67204.1| D-3-phosphoglycerate dehydrogenase [Aggregatibacter segnis ATCC
33393]
Length = 410
Score = 70.8 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + +
Sbjct: 326 VNFPEVSLPEHEGSKRLLHIHENRPGILTKINQIFVEANVNIAAQYLQTDPKIGYV--VI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ +L+KL +
Sbjct: 384 DVETDDSAPLLDKLRHIEGTIRTRVL 409
>gi|312140491|ref|YP_004007827.1| d-3-phosphoglycerate dehydrogenase [Rhodococcus equi 103S]
gi|311889830|emb|CBH49147.1| D-3-phosphoglycerate dehydrogenase [Rhodococcus equi 103S]
Length = 530
Score = 70.8 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 35/76 (46%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + I +FD+ I + D G++ +G +LG GI+I L + E A
Sbjct: 441 KIVNINGRSFDLRAEGHNIVVHYTDRPGVLGVLGTVLGTAGIDIQAAALSQDAEGEGATV 500
Query: 68 FLCIDGSILNSVLEKL 83
L +D + ++ + ++
Sbjct: 501 ILRVDRVVGDAEVAQI 516
>gi|154502772|ref|ZP_02039832.1| hypothetical protein RUMGNA_00586 [Ruminococcus gnavus ATCC 29149]
gi|153796655|gb|EDN79075.1| hypothetical protein RUMGNA_00586 [Ruminococcus gnavus ATCC 29149]
Length = 390
Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + V I I++ +I ++ +L G+NI+
Sbjct: 299 NGNITHSVNYPDCDMGVKGSGARITILHRNIPNMLGQFTALLAGEGMNISLM--ANKSKK 356
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E+A + + ++ + + + L + V+
Sbjct: 357 EYAYTMIDVESEVSGQIAKALEAVEGVLKVRVI 389
>gi|257455914|ref|ZP_05621131.1| D-3-phosphoglycerate dehydrogenase [Enhydrobacter aerosaccus SK60]
gi|257446660|gb|EEV21686.1| D-3-phosphoglycerate dehydrogenase [Enhydrobacter aerosaccus SK60]
Length = 410
Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 9/92 (9%), Positives = 26/92 (28%), Gaps = 2/92 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ ++ G + ++ ++ G++ + + INI L +
Sbjct: 320 GDTATSVNFPNVSMPQKEGTHRLLHIHQNVPGVLSQINKSFADANINIFAQSLMTEEDVG 379
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +E L V+
Sbjct: 380 --YLVMDVGSGDSAQAVEALKNIPETIRVRVL 409
>gi|109897481|ref|YP_660736.1| D-3-phosphoglycerate dehydrogenase [Pseudoalteromonas atlantica
T6c]
gi|109699762|gb|ABG39682.1| D-3-phosphoglycerate dehydrogenase [Pseudoalteromonas atlantica
T6c]
Length = 409
Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ R + ++ + G++ + E INIA +L + +
Sbjct: 325 VNFPEVSLPSHADRSRLLHIHKNAPGVLTQINQAFAEKNINIAAQYLQTDDIIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ + LE+L++ +
Sbjct: 383 DVETDDADEALEQLNLIDGTIKSRIL 408
>gi|301155286|emb|CBW14752.1| D-3-phosphoglycerate dehydrogenase [Haemophilus parainfluenzae
T3T1]
Length = 410
Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ +G + ++ + G++ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHVGTKRLLHIHENRPGVLNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + +L KL +
Sbjct: 386 ETDDASP--LLAKLREIEGTIKARVL 409
>gi|119899389|ref|YP_934602.1| D-3-phosphoglycerate dehydrogenase [Azoarcus sp. BH72]
gi|119671802|emb|CAL95716.1| D-3-phosphoglycerate dehydrogenase [Azoarcus sp. BH72]
Length = 410
Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G+ + ++ ++ G++ + GINIA +L + + +
Sbjct: 326 VNFPEVSLPEHAGKCRVLHIHRNVPGMLARINERFSRAGINIAGQYLQTTPDLGYV--VI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + ++L +
Sbjct: 384 DVDAAASQVAFDELCSIEGTIRCRVL 409
>gi|170741925|ref|YP_001770580.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Methylobacterium sp. 4-46]
gi|168196199|gb|ACA18146.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Methylobacterium sp. 4-46]
Length = 415
Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 26/86 (30%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V +I G++ + ++ GINIA + +
Sbjct: 326 VNFPQVQLAARPLGTRYIHVQRNIPGMLRRLNDVFARQGINIAAQFYQTDGEVGYVVIET 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++LE++ +
Sbjct: 386 DAVEGDAEALLEEIRQLEGTIRARLL 411
>gi|68536373|ref|YP_251078.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium jeikeium K411]
gi|68263972|emb|CAI37460.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium jeikeium K411]
Length = 529
Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 34/90 (37%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I D+ + +V D G + VG +LG GINI L + + A
Sbjct: 440 KIVRINHRGLDLRATGTNLFLVYPDQPGALGKVGTLLGNKGINIDAAALSPTDDEQTATL 499
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
L + + ++E++ +
Sbjct: 500 VLRVSEELDQQLVEEVKAELNASNAFVLNL 529
>gi|296394457|ref|YP_003659341.1| D-3-phosphoglycerate dehydrogenase [Segniliparus rotundus DSM
44985]
gi|296181604|gb|ADG98510.1| D-3-phosphoglycerate dehydrogenase [Segniliparus rotundus DSM
44985]
Length = 531
Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
D + + FD+ + I AD G + VG +LG+ G+NI + S +
Sbjct: 437 DQVAKITSVGRRGFDLRAEGFNLVISYADRPGALGKVGTLLGDAGVNIQAAAVSHDASGD 496
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
A L +D I + ++ ++ E ++
Sbjct: 497 GATMVLRVDNEIPADLRHAVA--DSVEATSLVEVDL 530
>gi|292492654|ref|YP_003528093.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Nitrosococcus halophilus Nc4]
gi|291581249|gb|ADE15706.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Nitrosococcus halophilus Nc4]
Length = 387
Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ I NA+I +V + L E G+NI + A + + +D I +L+
Sbjct: 316 EGWRLAIANANIPTMVAQISTHLAEGGLNIIDML--NKSRRDLAYTLVDVDRPIPKHLLD 373
Query: 82 KLSVNVTIRFVKQF 95
+ + V+
Sbjct: 374 GIKAIQGVLSVRAL 387
>gi|319441148|ref|ZP_07990304.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium variabile DSM
44702]
Length = 531
Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I + D+ L + + +D G + VG LG GINI L + + + A
Sbjct: 441 KIVRINDRGLDLRAEGLNLFLTYSDQPGALGTVGTFLGREGININAAALSQDLAEDSATL 500
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
L ++ I ++ ++ + + + ++
Sbjct: 501 VLRVEKEIPADLVSQIG--EALSASRAVQLDL 530
>gi|303311837|ref|XP_003065930.1| D-3-phosphoglycerate dehydrogenase, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240105592|gb|EER23785.1| D-3-phosphoglycerate dehydrogenase, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320039874|gb|EFW21808.1| D-3-phosphoglycerate dehydrogenase [Coccidioides posadasii str.
Silveira]
Length = 589
Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 34/118 (28%), Gaps = 23/118 (19%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL------ 56
S + ++ ++ N D G + VG+ILG+ +NI +
Sbjct: 472 SGSQIIISRLGRFATSFVPEGRLLICHNYDSPGKIGVVGSILGKQDVNINFMSVAPISKQ 531
Query: 57 ----------GRSQSTE-------HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +DG + V+ L + +
Sbjct: 532 LLEEDAAKGQSQKGYGGNGNGIHTEALMLLGVDGPVSQDVVTALVDSGGVLSASLVSL 589
>gi|119193730|ref|XP_001247470.1| hypothetical protein CIMG_01241 [Coccidioides immitis RS]
Length = 585
Score = 70.8 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 33/114 (28%), Gaps = 19/114 (16%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS- 61
S + ++ ++ N D G + VG+ILG+ +NI +
Sbjct: 472 SGSQIIISRLGRFATSFVPEGRLLICHNYDSPGKIGVVGSILGKEDVNINFMSVAPISKQ 531
Query: 62 ------------------TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
A+ L +DG + V+ L + +
Sbjct: 532 LLEENAAKGQNGGNGNGIHTEALMLLGVDGPVSQDVVTALVDSGGVLSASLVSL 585
>gi|160937406|ref|ZP_02084767.1| hypothetical protein CLOBOL_02297 [Clostridium bolteae ATCC
BAA-613]
gi|158439475|gb|EDP17225.1| hypothetical protein CLOBOL_02297 [Clostridium bolteae ATCC
BAA-613]
Length = 387
Score = 70.5 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + + +++ +I ++ + IL E G+NI+ ++A + L
Sbjct: 303 VNFPSCDMGMCQAESRVAVLHMNIPNMIGQITAILAEQGMNISDMT--NKSRDKYAYTLL 360
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ +S ++KL + V+ +
Sbjct: 361 DLEHKAEDSTIQKLRAIKGVLRVRVVK 387
>gi|326381545|ref|ZP_08203239.1| D-3-phosphoglycerate dehydrogenase [Gordonia neofelifaecis NRRL
B-59395]
gi|326199792|gb|EGD56972.1| D-3-phosphoglycerate dehydrogenase [Gordonia neofelifaecis NRRL
B-59395]
Length = 531
Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 17/110 (15%)
Query: 1 VFSDGKP--------------RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGE 46
VF+DG + + I NFD+ + + AD G + +G +LG
Sbjct: 420 VFADGSIVNVAGTLTGPQQVQKIVNINGRNFDLRAEGRNLLVSYADQPGSLGKIGTVLGN 479
Query: 47 YGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
G++I L + A L +D + ++++ +
Sbjct: 480 AGVDIVAAALAQDVEGAGATMILRLDRELDDALVA---SVGDAVSATLIK 526
>gi|325285236|ref|YP_004261026.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Cellulophaga lytica DSM 7489]
gi|324320690|gb|ADY28155.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Cellulophaga lytica DSM 7489]
Length = 630
Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S + I ++ ++ GI+ + +L EY +NI +L
Sbjct: 539 SGNTVDAVNFPSIRLPRQTNAHRFLHIHKNVPGIMAKINKVLAEYEMNINGQYLSTDSEV 598
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ I+ +D V++ L +
Sbjct: 599 GYVIT--DLDKKYNKEVIKALKKVENTIKFRVL 629
>gi|255281743|ref|ZP_05346298.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Bryantella formatexigens DSM 14469]
gi|255267810|gb|EET61015.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Bryantella formatexigens DSM 14469]
Length = 387
Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ E + + I I + +I ++ ++LGE +NIA+
Sbjct: 296 HGNIHHSVNYPECDMGICSTVCRIAINHRNIKNMIGQFASVLGEADLNIANM--ANQSKG 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E+A S +D + V+E L + V+ +
Sbjct: 354 EYAYSLFDLDTMVTPQVIETLKKIDGVLKVRVLK 387
>gi|261855935|ref|YP_003263218.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Halothiobacillus neapolitanus c2]
gi|261836404|gb|ACX96171.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Halothiobacillus neapolitanus c2]
Length = 387
Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 4/93 (4%)
Query: 4 DGKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+G R + E+ G + I N ++ +V + +ILG+ +NI L
Sbjct: 298 NGNIRNSVNFPEVRM-ARSGVQRLAIANRNMPDMVGQISHILGKSNVNIE--RLTNESRK 354
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + + +D + + L L I ++
Sbjct: 355 QVAYTLIDLDSPVSDDTLAALRGINGILRIRVL 387
>gi|74316968|ref|YP_314708.1| D-3-phosphoglycerate dehydrogenase [Thiobacillus denitrificans ATCC
25259]
gi|74056463|gb|AAZ96903.1| D-isomer specific 2-hydroxyacid dehydrogenase [Thiobacillus
denitrificans ATCC 25259]
Length = 391
Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + + I NA++ +V + ++L G+NI +
Sbjct: 300 NGNILNSVNFPSVAMPRE-SAFRLAIANANVPNMVGQISSVLAAAGLNIHNMV--NKSKG 356
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + + +D ++ SV+ +L+ + V+
Sbjct: 357 DMAYTLVDVDSAVAGSVIAQLNAIGGVLGVRYL 389
>gi|51245561|ref|YP_065445.1| D-3-phosphoglycerate dehydrogenase [Desulfotalea psychrophila
LSv54]
gi|50876598|emb|CAG36438.1| related to D-3-phosphoglycerate dehydrogenase [Desulfotalea
psychrophila LSv54]
Length = 393
Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 36/95 (37%), Gaps = 3/95 (3%)
Query: 4 DGKPRFIKIQEIN-FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ I D + + ++N D+ G++ V NI + +NI + +
Sbjct: 300 GNVVHSVNFPNIESTPADTVKNRLIVINKDVPGMIANVSNIFSGFNVNIVSYL--NQSNG 357
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ + ++ +I ++ K+ + + EF
Sbjct: 358 AIGYNIIDMEETIPEELVAKIVELPDVIRTRVIEF 392
>gi|291548213|emb|CBL21321.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Ruminococcus sp. SR1/5]
Length = 347
Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I + +++ ++ V ILG G+NIA E A + + ++ + L++L
Sbjct: 278 RISLAHSNTPNMISQVTKILGSEGLNIADMT--NKSKGEFAYTLIDLESAASAKALDELK 335
Query: 85 VNVTIRFVKQFE 96
+ V+ +
Sbjct: 336 EIEGMYRVRVVK 347
>gi|311740551|ref|ZP_07714378.1| phosphoglycerate dehydrogenase [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304071|gb|EFQ80147.1| phosphoglycerate dehydrogenase [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 528
Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG +FI+I D+ + AD G + VG LG GINI +
Sbjct: 434 DGTEKFIRINGRGVDMRATGRNLFFRYADAPGALGTVGTKLGAAGINIVAAAFTHGKQES 493
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFN 98
A+ L ++ + ++ +++ + +Q
Sbjct: 494 DAVLILRVEAEVPEHLIAEINATLGA-ECEQLNME 527
>gi|156932634|ref|YP_001436550.1| D-3-phosphoglycerate dehydrogenase [Cronobacter sakazakii ATCC
BAA-894]
gi|156530888|gb|ABU75714.1| hypothetical protein ESA_00416 [Cronobacter sakazakii ATCC BAA-894]
Length = 412
Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + G + ++ + G++ + I E GINIA +L + + +
Sbjct: 325 VNFPEVSLPLHGGSVSRLLHIHENRPGVLTAINQIFAEQGINIAAQYLQTTPQMGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ I + L+ + +
Sbjct: 385 IDAPEDIAYNALQSMKAIQGTIRARLL 411
>gi|225561271|gb|EEH09552.1| D-3-phosphoglycerate dehydrogenase [Ajellomyces capsulatus G186AR]
Length = 598
Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 35/118 (29%), Gaps = 26/118 (22%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST--- 62
+P ++ ++ N D G + VG+ILG G+NI +
Sbjct: 481 QPLISRLGRFATSFVPEGTLLICHNYDSPGKIGVVGSILGREGVNINFMGVAPVSKGLVE 540
Query: 63 -----------------------EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D ++ +SV + L +
Sbjct: 541 GEKAVASSETNAHPDSRDKVVPEKEALMILGVDRAVEDSVAKALVEEGGVLSASVISL 598
>gi|192359656|ref|YP_001981568.1| D-isomer specific 2-hydroxyacid dehydrogenase [Cellvibrio japonicus
Ueda107]
gi|190685821|gb|ACE83499.1| D-isomer specific 2-hydroxyacid dehydrogenase [Cellvibrio japonicus
Ueda107]
Length = 391
Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVDIG-RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ ++ D G I N ++ G++ V +IL + +N+ + A +
Sbjct: 307 VNFPAVSMDRGPGIGARITFSNENVSGVLGHVLSILADNKVNVVDMV--NKSRGDVAYNI 364
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + G+ SV++ ++ + V+
Sbjct: 365 IDVAGAPDASVIDAIAKVDHVIAVRVI 391
>gi|219559028|ref|ZP_03538104.1| D-3-phosphoglycerate dehydrogenase [Mycobacterium tuberculosis T17]
gi|289571195|ref|ZP_06451422.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis T17]
gi|289544949|gb|EFD48597.1| D-3-phosphoglycerate dehydrogenase serA1 [Mycobacterium
tuberculosis T17]
Length = 528
Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 32/78 (41%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I +FD+ + + I G + +G +LG G+NI L A
Sbjct: 438 KIVQINGRHFDLRAQGINLIIHYVHRAGALGKIGTLLGTAGVNILAAQLSEDAEGPGATI 497
Query: 68 FLCIDGSILNSVLEKLSV 85
L +D + + V ++
Sbjct: 498 LLRLDQDVPDDVRTAIAA 515
>gi|167746527|ref|ZP_02418654.1| hypothetical protein ANACAC_01237 [Anaerostipes caccae DSM 14662]
gi|167653487|gb|EDR97616.1| hypothetical protein ANACAC_01237 [Anaerostipes caccae DSM 14662]
Length = 386
Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 30/92 (32%), Gaps = 2/92 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I + + ++ ++ + + L E G NI + +
Sbjct: 297 GNIVNSVNYPNCDLGDIEAECRITVHHKNLPNMIGQLTSALAEEGYNIENML--NKSKKD 354
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+A S ++ VL K+ + ++
Sbjct: 355 YAYSIFDVEKRPSEKVLSKMKQIDGVIRLRVL 386
>gi|29655020|ref|NP_820712.1| D-3-phosphoglycerate dehydrogenase [Coxiella burnetii RSA 493]
gi|212211774|ref|YP_002302710.1| D-3-phosphoglycerate dehydrogenase [Coxiella burnetii CbuG_Q212]
gi|29542289|gb|AAO91226.1| D-3-phosphoglycerate dehydrogenase [Coxiella burnetii RSA 493]
gi|212010184|gb|ACJ17565.1| D-3-phosphoglycerate dehydrogenase [Coxiella burnetii CbuG_Q212]
Length = 388
Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
I I N ++ +V V +L + INI E A + + ++ I +
Sbjct: 314 ARTEGCRIAITNKNVPNMVAQVSTVLSQADINIIDMI--NKSRDEIAYTLIDVNKKIDQN 371
Query: 79 VLEKLSVNVTIRFVKQF 95
+L +L I V+
Sbjct: 372 ILHQLQSIDGIIRVRLL 388
>gi|85059987|ref|YP_455689.1| D-3-phosphoglycerate dehydrogenase [Sodalis glossinidius str.
'morsitans']
gi|84780507|dbj|BAE75284.1| D-3-phosphoglycerate dehydrogenase [Sodalis glossinidius str.
'morsitans']
Length = 410
Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ R + ++ + G++ + I E GINIA +L + +
Sbjct: 325 VNFPEVSLPEHGERVSRLLHIHENRPGVLTRINQIFAELGINIAAQYLQTTPEIGYV--V 382
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ ++ + ++ L+ + +
Sbjct: 383 IDVETAAKDTALQLMKAISGTIRARLL 409
>gi|325478450|gb|EGC81564.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Anaerococcus prevotii ACS-065-V-Col13]
Length = 220
Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I + + + + + G++ FV IL + G NI +
Sbjct: 128 GGGAIVITNINGNAIEFKANKPTLFMAYGEQKGVIAFVSGILFDNGYNINTMK--TIKED 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
++ + +D + + VL+K+ F+K
Sbjct: 186 DNVMLVCELDEPLRDDVLQKIREGKDFTFIKYI 218
>gi|326791174|ref|YP_004308995.1| phosphoglycerate dehydrogenase [Clostridium lentocellum DSM 5427]
gi|326541938|gb|ADZ83797.1| Phosphoglycerate dehydrogenase [Clostridium lentocellum DSM 5427]
Length = 385
Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ I + + I+ + I+ E GINI ++A + + D SI ++++
Sbjct: 315 RLAIAHKNTPAILGKITAIIAEQGINIQDMT--NRSRGDYAYTLIDTDTSISEEDIQRIE 372
Query: 85 VNVTIRFVKQFE 96
+ V+
Sbjct: 373 SVDNVIKVRILT 384
>gi|325576992|ref|ZP_08147563.1| D-3-phosphoglycerate dehydrogenase [Haemophilus parainfluenzae ATCC
33392]
gi|325160950|gb|EGC73069.1| D-3-phosphoglycerate dehydrogenase [Haemophilus parainfluenzae ATCC
33392]
Length = 419
Score = 70.1 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ +G + ++ + G++ + I E +NIA +L + + +
Sbjct: 335 VNFPEVSLPEHVGTKRLLHIHENRPGVLNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 394
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + +L KL +
Sbjct: 395 ETDDASP--LLAKLREIEGTIKARVL 418
>gi|297587894|ref|ZP_06946538.1| L-serine ammonia-lyase [Finegoldia magna ATCC 53516]
gi|297574583|gb|EFH93303.1| L-serine ammonia-lyase [Finegoldia magna ATCC 53516]
Length = 220
Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I I I I + D+ GI+ + + L G NI +
Sbjct: 127 GGGNIEIIDINGIAVQFTGTYPTILLKYVDVRGIIADISSELARNGYNIEGMK--TLKHD 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ +D +I + E L + F K +
Sbjct: 185 GIVTLIVELDKNIGEDLTEHLLKDERFLFTKYIQ 218
>gi|161830073|ref|YP_001597554.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Coxiella burnetii RSA 331]
gi|161761940|gb|ABX77582.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Coxiella burnetii RSA 331]
Length = 388
Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
I I N ++ +V V +L + INI E A + + ++ I +
Sbjct: 314 ARTEGCRIAITNKNVPNMVAQVSTVLSQADINIIDMI--NKSRDEIAYTLIDVNKKIDQN 371
Query: 79 VLEKLSVNVTIRFVKQF 95
+L +L I V+
Sbjct: 372 ILHQLQSIDGIIRVRLL 388
>gi|165923947|ref|ZP_02219779.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Coxiella burnetii RSA 334]
gi|165916603|gb|EDR35207.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Coxiella burnetii RSA 334]
Length = 388
Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
I I N ++ +V V +L + INI E A + + ++ I +
Sbjct: 314 ARTEGCRIAITNKNVPNMVAQVSTVLSQADINIIDMI--NKSRDEIAYTLIDVNKKIDQN 371
Query: 79 VLEKLSVNVTIRFVKQF 95
+L +L I V+
Sbjct: 372 ILHQLQSIDGIIRVRLL 388
>gi|154706091|ref|YP_001423693.1| D-3-phosphoglycerate dehydrogenase [Coxiella burnetii Dugway
5J108-111]
gi|154355377|gb|ABS76839.1| D-3-phosphoglycerate dehydrogenase [Coxiella burnetii Dugway
5J108-111]
Length = 388
Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
I I N ++ +V V +L + INI E A + + ++ I +
Sbjct: 314 ARTEGCRIAITNKNVPNMVAQVSTVLSQADINIIDMI--NKSRDEIAYTLIDVNKKIDQN 371
Query: 79 VLEKLSVNVTIRFVKQF 95
+L +L I V+
Sbjct: 372 ILHQLQSIDGIIRVRLL 388
>gi|332174924|gb|AEE24178.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Glaciecola agarilytica 4H-3-7+YE-5]
Length = 409
Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ R + ++ + G++ + + INIA +L + + +
Sbjct: 325 VNFPEVSLPSHADRSRLLHIHKNAPGVLTQINQAFAQKNINIAAQYLQTDDTIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ + LE+L++ +
Sbjct: 383 DVETDDADEALEQLNMIDGTIKSRIL 408
>gi|154270428|ref|XP_001536069.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409996|gb|EDN05384.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 603
Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 35/118 (29%), Gaps = 26/118 (22%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST--- 62
+P ++ ++ N D G + VG+ILG G+NI +
Sbjct: 486 QPLISRLGRFATSFVPEGTLLICHNYDSPGKIGVVGSILGREGVNINFMGVAPVSKGLVE 545
Query: 63 -----------------------EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D ++ +SV + L +
Sbjct: 546 GEKAVASSETNAHPDSMDKVVPEKEALMILGVDRAVEDSVAKALVEEGGVLSASVISL 603
>gi|225351431|ref|ZP_03742454.1| hypothetical protein BIFPSEUDO_03026 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157775|gb|EEG71058.1| hypothetical protein BIFPSEUDO_03026 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 276
Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + + +I I ++A++ G++ V +LGE INIA LG
Sbjct: 184 FRGSTMLSVNLPQITLSDIRSNFRIAHLHANLPGVLAKVNRVLGEENINIAAQALGT--E 241
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E + L++L+ ++
Sbjct: 242 GEIGYVVTDVAQRPSQKALDELAAIEGTIRMRVIS 276
>gi|251788160|ref|YP_003002881.1| D-3-phosphoglycerate dehydrogenase [Dickeya zeae Ech1591]
gi|247536781|gb|ACT05402.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Dickeya
zeae Ech1591]
Length = 410
Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ R + ++ + GI+ + NI E GINIA +L S + + +
Sbjct: 325 VNFPEVSLPTHSDRASRLLHIHENRPGIMTQINNIFAEQGINIAAQYLQTSPTIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ DG+ ++ L+ + +
Sbjct: 385 VETDGA--DTALQLMKAIPGTIRARLL 409
>gi|302408012|ref|XP_003001841.1| D-3-phosphoglycerate dehydrogenase [Verticillium albo-atrum
VaMs.102]
gi|261359562|gb|EEY21990.1| D-3-phosphoglycerate dehydrogenase [Verticillium albo-atrum
VaMs.102]
Length = 630
Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 35/103 (33%), Gaps = 15/103 (14%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S ++ N + ++ + N D G + VG +LG YG+NI + +
Sbjct: 468 SGQSIYISRLDRFNATFEPEGTLLVLHNYDEPGKIGGVGMVLGRYGVNIRFMQVASVDAG 527
Query: 63 --------------EHAISFLCIDGSILNSVLEKLSVNVTIRF 91
A+ L +DG + V+ L I
Sbjct: 528 AKRKRVEGENGNEENEALMILGVDG-VSAEVVTDLKGTEGILD 569
>gi|260063164|ref|YP_003196244.1| D-3-phosphoglycerate dehydrogenase [Robiginitalea biformata
HTCC2501]
gi|88783258|gb|EAR14430.1| D-3-phosphoglycerate dehydrogenase [Robiginitalea biformata
HTCC2501]
Length = 627
Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I ++ ++ GI+ + +L Y +NI +L + I+
Sbjct: 543 VNFPNIRLPKQQNAHRFLHIHKNVPGIMAHINKVLASYDMNIIGQYLSTDPEVGYVIT-- 600
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D +V+++L +
Sbjct: 601 DLDKEYNKAVIKELKAIEHTIKFRVL 626
>gi|152965481|ref|YP_001361265.1| D-3-phosphoglycerate dehydrogenase [Kineococcus radiotolerans
SRS30216]
gi|151359998|gb|ABS03001.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Kineococcus radiotolerans SRS30216]
Length = 425
Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + + G + + ++ ++ G++ + +L E G+NI L +
Sbjct: 341 VNLPTLGTETTPGTVRLAHLHRNVPGVLANINKVLAEAGVNIEGQQLAT--RGDLGYVVT 398
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I V +L V+Q
Sbjct: 399 DIAAHASEDVGRRLRELPETVRVRQL 424
>gi|254417937|ref|ZP_05031661.1| HAD-superfamily hydrolase, subfamily IB (PSPase-like), putative
[Brevundimonas sp. BAL3]
gi|196184114|gb|EDX79090.1| HAD-superfamily hydrolase, subfamily IB (PSPase-like), putative
[Brevundimonas sp. BAL3]
Length = 630
Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + G I ++ + G++ + L G+NI HL + T + I+
Sbjct: 546 VNLPNVQLAEVSGAHRILHIHKNQPGVLAELNRALAAAGLNILGQHLKTDERTGYVIT-- 603
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D L L +
Sbjct: 604 DVDRDYDPEALRTLKTVPGTLKFRTLH 630
>gi|226324611|ref|ZP_03800129.1| hypothetical protein COPCOM_02395 [Coprococcus comes ATCC 27758]
gi|225207059|gb|EEG89413.1| hypothetical protein COPCOM_02395 [Coprococcus comes ATCC 27758]
Length = 386
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 36/93 (38%), Gaps = 4/93 (4%)
Query: 4 DGKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+G R + + V + I I++ +I ++ +L + +NI
Sbjct: 296 NGNIRNSVNFPACDMGVR-DKTRITILHRNIPNMIGQFTALLAKDNVNIDDMT--NKSRG 352
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+A + + +D + V++ L + + V+
Sbjct: 353 SYAYTMIDVDNDVAEDVVKGLEMIEGVLKVRVI 385
>gi|291276391|ref|YP_003516163.1| D-3-phosphoglycerate dehydrogenase [Helicobacter mustelae 12198]
gi|290963585|emb|CBG39417.1| D-3-phosphoglycerate dehydrogenase [Helicobacter mustelae 12198]
Length = 527
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILG-EYGINIAHFHLGRSQSTE 63
P+ + + E IG+ + I + + ++ + ILG ++ INI H +
Sbjct: 431 NIPKVLCLDEYETAFSIGQHTLLIPHQNKPAMIAKIAEILGSKHQININHMSV-TQGKNG 489
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
++ + D +I N VLE++ I
Sbjct: 490 ESLMLISTDVAIQNEVLEEIRQTDGI 515
>gi|307132677|ref|YP_003884693.1| D-3-phosphoglycerate dehydrogenase [Dickeya dadantii 3937]
gi|306530206|gb|ADN00137.1| D-3-phosphoglycerate dehydrogenase [Dickeya dadantii 3937]
Length = 410
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ R + ++ + GI+ + +I E GINIA +L S + +
Sbjct: 325 VNFPEVSLPTHSDRASRLLHIHENRPGIMTQINHIFAEQGINIAAQYLQTSPEIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ DG+ ++ L+ + +
Sbjct: 385 VETDGA--DTALQLMKSIPGTIRARLL 409
>gi|283795980|ref|ZP_06345133.1| D-3-phosphoglycerate dehydrogenase [Clostridium sp. M62/1]
gi|291076626|gb|EFE13990.1| D-3-phosphoglycerate dehydrogenase [Clostridium sp. M62/1]
gi|295090925|emb|CBK77032.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Clostridium cf. saccharolyticum K10]
Length = 387
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + V + +++ +I ++ + IL +NIA+
Sbjct: 296 NGNIHHSVNYPDCDMGVCASVSRVALLHRNIPNMIGQISAILAATDMNIANMV--NKSRD 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A + + ++ + +EKL ++ V+
Sbjct: 354 KYAYTLIDLETEADSETIEKLKKISGMKRVRVIR 387
>gi|153208202|ref|ZP_01946612.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Coxiella burnetii 'MSU Goat Q177']
gi|212217943|ref|YP_002304730.1| D-3-phosphoglycerate dehydrogenase [Coxiella burnetii CbuK_Q154]
gi|120576107|gb|EAX32731.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Coxiella burnetii 'MSU Goat Q177']
gi|212012205|gb|ACJ19585.1| D-3-phosphoglycerate dehydrogenase [Coxiella burnetii CbuK_Q154]
Length = 388
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
I I N ++ +V V + + INI E A + + ++ I +
Sbjct: 314 ARTEGCRIAITNKNVPNMVAQVSTVFSQADINIIDMI--NKSRDEIAYTLIDVNKKIDQN 371
Query: 79 VLEKLSVNVTIRFVKQF 95
+L +L I V+
Sbjct: 372 ILHQLQSIDGIIRVRLL 388
>gi|260599254|ref|YP_003211825.1| D-3-phosphoglycerate dehydrogenase [Cronobacter turicensis z3032]
gi|260218431|emb|CBA33539.1| D-3-phosphoglycerate dehydrogenase [Cronobacter turicensis z3032]
Length = 428
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + G + ++ + G++ + I E GINIA +L + + +
Sbjct: 341 VNFPEVSLPLHGGSVSRLLHIHENRPGVLTAINQIFAEQGINIAAQYLQTTPQMGYVVID 400
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ I + L+ + +
Sbjct: 401 VDAPEDIAYNALQSMKAIQGTIRARLL 427
>gi|222080786|ref|YP_002542514.1| D-3-phosphoglycerate dehydrogenase [Agrobacterium radiobacter K84]
gi|221725465|gb|ACM28554.1| D-3-phosphoglycerate dehydrogenase protein [Agrobacterium
radiobacter K84]
Length = 412
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 25/86 (29%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + G++ + I +NI L T + +
Sbjct: 326 VNFPQVQLPPRPNGTRFIHVHENRPGMLNSLNAIFSSRALNIVGEFLQTHGDTGYVVIEA 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
G + +L+ L +
Sbjct: 386 EGVGQTADDILDALRQIPGTIRARLL 411
>gi|305667295|ref|YP_003863582.1| D-3-phosphoglycerate dehydrogenase [Maribacter sp. HTCC2170]
gi|88709342|gb|EAR01575.1| D-3-phosphoglycerate dehydrogenase [Maribacter sp. HTCC2170]
Length = 627
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S + I ++ ++ G++ + +L +Y +NI +L
Sbjct: 536 SGNTVDAVNFPNIRLPKQTNAHRFLHIHENVPGVMAKINEVLAKYEMNIVGQYLSTDMDL 595
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ IS +D VL+ L +
Sbjct: 596 GYVIS--DMDKEYNKDVLKALKQIDHTIKFRVL 626
>gi|256422762|ref|YP_003123415.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Chitinophaga pinensis DSM 2588]
gi|256037670|gb|ACU61214.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Chitinophaga pinensis DSM 2588]
Length = 412
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 29/84 (34%), Gaps = 2/84 (2%)
Query: 12 IQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI 71
I I+ I ++ ++ G++ + +L + INI +L + + + L +
Sbjct: 330 IPAISVPAVDHTHRILHIHENVPGVLSEINTVLSQNKINILGQYLKTNDAIGYV--VLDV 387
Query: 72 DGSILNSVLEKLSVNVTIRFVKQF 95
D + L +
Sbjct: 388 DSKLSKEAFALLKDVNHTIKTRLL 411
>gi|240949734|ref|ZP_04754066.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus minor NM305]
gi|240295766|gb|EER46453.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus minor NM305]
Length = 409
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++A+ GI+ + + + +NIA +L + +
Sbjct: 325 VNFPEVSLPTHDNTKRLLHIHANKPGILNKINQVFVDANVNIAGQYLQTDPEIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + L++L +
Sbjct: 383 DVQSEDTSEALQRLKEIEGTIKTRVL 408
>gi|169825201|ref|YP_001692812.1| L-serine dehydratase subunit beta [Finegoldia magna ATCC 29328]
gi|302380461|ref|ZP_07268929.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Finegoldia magna ACS-171-V-Col3]
gi|303234617|ref|ZP_07321251.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Finegoldia magna BVS033A4]
gi|167832006|dbj|BAG08922.1| L-serine dehydratase beta subunit [Finegoldia magna ATCC 29328]
gi|302311772|gb|EFK93785.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Finegoldia magna ACS-171-V-Col3]
gi|302494280|gb|EFL54052.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Finegoldia magna BVS033A4]
Length = 220
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I I I I + D+ GI+ + + L +G NI +
Sbjct: 127 GGGNIEIIDINGIAVQFTGSYPTILLKYVDVRGIIADISSNLARHGYNIEGMK--TLKHD 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ +D +I + E L + F K +
Sbjct: 185 GIVTLIVELDKNIGEDLTENLLKDKRFLFTKYIQ 218
>gi|189500503|ref|YP_001959973.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Chlorobium phaeobacteroides BS1]
gi|189495944|gb|ACE04492.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Chlorobium phaeobacteroides BS1]
Length = 387
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G I I N+++ +V + ++L + GINI + A + L
Sbjct: 305 VNFPEMRMP-RAGASRIAISNSNVPKMVGQITSVLADSGINIVDML--NKSRGDIAYNLL 361
Query: 70 CIDGSILNSVLEKLSVNVTIRFVK 93
+ + + +K+ + V+
Sbjct: 362 DLGTEVGKDIADKIKKIEGVLAVR 385
>gi|255932639|ref|XP_002557876.1| Pc12g10550 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582495|emb|CAP80682.1| Pc12g10550 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 596
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 34/117 (29%), Gaps = 27/117 (23%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S +P ++ + ++ N + G + VGNILG+ G+NI +
Sbjct: 475 SGDRPLITRLGRFEASFEPQGTLLICENYNSPGKIGVVGNILGQEGVNINFMAVAPVSPK 534
Query: 63 ---------------------------EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L ID + V L+ I
Sbjct: 535 LAVNESLKEPFPTDGSSQEPTAKSQSLNEALMILGIDRGVPAHVTAALAKETGILSA 591
>gi|30248351|ref|NP_840421.1| D-isomer specific 2-hydroxyacid dehydrogenase [Nitrosomonas
europaea ATCC 19718]
gi|30138237|emb|CAD84245.1| D-isomer specific 2-hydroxyacid dehydrogenase [Nitrosomonas
europaea ATCC 19718]
Length = 403
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 9/86 (10%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + + + NA++ ++ + + + G+NI + E A + +
Sbjct: 312 VNFPDVVME-RGTPYRVAVANANVPNLLGQISTCMADVGLNIHNMV--NKSRGEMAYTLV 368
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D ++ ++ + + V+
Sbjct: 369 DTDKAVPQETIDAIVRITGVLMVRYL 394
>gi|219871235|ref|YP_002475610.1| D-3-phosphoglycerate dehydrogenase [Haemophilus parasuis SH0165]
gi|219691439|gb|ACL32662.1| D-3-phosphoglycerate dehydrogenase [Haemophilus parasuis SH0165]
Length = 410
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + + + +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHKGTKRLLHIHENRPGILNQINKVFVDANVNIAAEYLQTDPTIGYV--VI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ L++L +
Sbjct: 384 DVETEQTGEALKRLKEIDGTIRARVL 409
>gi|292487120|ref|YP_003529990.1| D-3-phosphoglycerate dehydrogenase [Erwinia amylovora CFBP1430]
gi|292900496|ref|YP_003539865.1| D-3-phosphoglycerate dehydrogenase [Erwinia amylovora ATCC 49946]
gi|291200344|emb|CBJ47472.1| D-3-phosphoglycerate dehydrogenase [Erwinia amylovora ATCC 49946]
gi|291552537|emb|CBA19582.1| D-3-phosphoglycerate dehydrogenase [Erwinia amylovora CFBP1430]
gi|312171225|emb|CBX79484.1| D-3-phosphoglycerate dehydrogenase [Erwinia amylovora ATCC
BAA-2158]
Length = 412
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 30/87 (34%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E + + + ++ + GI+ + I E GINI+ +L + + +
Sbjct: 325 VNFPEASLPMHGANASRLMHIHENRPGILTAINQIFAEQGINISAQYLQTTPQMGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + L+ + +
Sbjct: 385 VEAPQETADKALQLMKAIPGTVRARLL 411
>gi|259909575|ref|YP_002649931.1| D-3-phosphoglycerate dehydrogenase [Erwinia pyrifoliae Ep1/96]
gi|224965197|emb|CAX56729.1| D-3-phosphoglycerate dehydrogenase [Erwinia pyrifoliae Ep1/96]
gi|283479654|emb|CAY75570.1| D-3-phosphoglycerate dehydrogenase [Erwinia pyrifoliae DSM 12163]
Length = 412
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 30/87 (34%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E + + + ++ + G++ + I E GINI+ +L + + +
Sbjct: 325 VNFPEASLPMHGANASRLMHIHENRPGVLTAINQIFAEQGINISAQYLQTTPQMGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + L+ + +
Sbjct: 385 VEAPQETADKALQLMKAIPGTVRARLL 411
>gi|254523303|ref|ZP_05135358.1| D-3-phosphoglycerate dehydrogenase [Stenotrophomonas sp. SKA14]
gi|219720894|gb|EED39419.1| D-3-phosphoglycerate dehydrogenase [Stenotrophomonas sp. SKA14]
Length = 413
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 29/86 (33%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ V I + +NI L + + +
Sbjct: 327 VNFPEVTLPEHADSLRLLHIHQNVPGVLSKVNEIFSRHNVNIDGQFLRTDPKVGYVVIDI 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+V ++L+ +
Sbjct: 387 TASEEQAAAVRDELAAIPGTLRTRIL 412
>gi|227500872|ref|ZP_03930921.1| L-serine ammonia-lyase [Anaerococcus tetradius ATCC 35098]
gi|227216976|gb|EEI82361.1| L-serine ammonia-lyase [Anaerococcus tetradius ATCC 35098]
Length = 220
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G K+ + + + + A+ G++ FV IL + G NI +
Sbjct: 128 GGGAIVITKMNGNPIEFKANKPTLFMSYAEQKGVIAFVSGILFDNGYNINTMK--TIKEG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +D + +LEK+ F+K
Sbjct: 186 NNVMLVCELDDPLREDILEKIRAGKDFTFLKYI 218
>gi|154482701|ref|ZP_02025149.1| hypothetical protein EUBVEN_00377 [Eubacterium ventriosum ATCC
27560]
gi|149736477|gb|EDM52363.1| hypothetical protein EUBVEN_00377 [Eubacterium ventriosum ATCC
27560]
Length = 387
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + V I + + +I ++ + +++ GIN++
Sbjct: 296 NGNIVNSVNYPKCDLGVCDKTTRITVCHKNIPNMIGQLTSVVAAEGINVSDMV--DKSKG 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A + + D ++ KL + V+ +
Sbjct: 354 DYAYAIIDCDDPATEQLVSKLQAVEGVIKVRVIK 387
>gi|310766517|gb|ADP11467.1| D-3-phosphoglycerate dehydrogenase [Erwinia sp. Ejp617]
Length = 412
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 30/87 (34%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E + + + ++ + G++ + I E GINI+ +L + + +
Sbjct: 325 VNFPEASLPMHGANASRLMHIHENRPGVLTAINQIFAEQGINISAQYLQTTPQMGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + L+ + +
Sbjct: 385 VEAPQETADKALQLMKAIPGTVRARLL 411
>gi|295134716|ref|YP_003585392.1| D-3-phosphoglycerate dehydrogenase [Zunongwangia profunda SM-A87]
gi|294982731|gb|ADF53196.1| D-3-phosphoglycerate dehydrogenase [Zunongwangia profunda SM-A87]
Length = 630
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 2/92 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G + + + ++ + GI+ + IL IN+ HL +++
Sbjct: 540 GGTTNSVNFPNLQLPRLENAHRLIHIHHNKPGIIAHMNRILAANDINVVGQHLKTNETIG 599
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ I+ I+ N V+++L +
Sbjct: 600 YVIT--DINKKYDNDVIKELKGIEGTIRFRVL 629
>gi|319948224|ref|ZP_08022380.1| D-3-phosphoglycerate dehydrogenase [Dietzia cinnamea P4]
gi|319438099|gb|EFV93063.1| D-3-phosphoglycerate dehydrogenase [Dietzia cinnamea P4]
Length = 530
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
D + ++I E FD+ + + +D G++ VG+ILG GI+I L + + E
Sbjct: 437 DQVQKIVRINERGFDLRAQGQNLFVHYSDRPGVLGKVGSILGGEGIDIQAAALSQDATGE 496
Query: 64 HAISFLCIDGSILNSVLEKL 83
A L +D ++ ++++
Sbjct: 497 GASLILRVDRAVAEPTIDRI 516
>gi|152979526|ref|YP_001345155.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus succinogenes
130Z]
gi|150841249|gb|ABR75220.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Actinobacillus succinogenes 130Z]
Length = 412
Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 30/88 (34%), Gaps = 4/88 (4%)
Query: 10 IKIQEINFDV--DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ E++ + ++ + GI+ + + + +NIA L + +
Sbjct: 326 VNFPEVSLPEQNTGKAKRLLHIHRNKPGILNKINQVFVDADVNIAAQFLQTDPTIGYV-- 383
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ ++ + +L KL +
Sbjct: 384 VIDVETENTDDLLTKLKEIDGTIRARVL 411
>gi|190574149|ref|YP_001971994.1| D-3-phosphoglycerate dehydrogenase [Stenotrophomonas maltophilia
K279a]
gi|190012071|emb|CAQ45693.1| putative D-3-phosphoglycerate dehydrogenase [Stenotrophomonas
maltophilia K279a]
Length = 440
Score = 69.3 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 29/86 (33%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ V I + +NI L + + +
Sbjct: 354 VNFPEVTLPEHEDSLRLLHIHQNVPGVLSKVNEIFSRHNVNIDGQFLRTDPKVGYVVIDI 413
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+V ++L+ +
Sbjct: 414 TASEEQAAAVRDELAAIPGTLRTRIL 439
>gi|317508269|ref|ZP_07965949.1| phosphoglycerate dehydrogenase [Segniliparus rugosus ATCC BAA-974]
gi|316253444|gb|EFV12834.1| phosphoglycerate dehydrogenase [Segniliparus rugosus ATCC BAA-974]
Length = 523
Score = 69.3 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 36/88 (40%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + FD+ + + + AD G + +G +LG+ G+NI + S +
Sbjct: 429 GQVAKITSVGHRGFDLRAEGVNLVVSYADRPGALGKIGTLLGDAGVNIEAAAVSHDASGD 488
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRF 91
A L +D I + + + + V R
Sbjct: 489 GATIVLRVDKEIDSQLRQTVRDAVGARS 516
>gi|260913238|ref|ZP_05919720.1| D-3-phosphoglycerate dehydrogenase [Pasteurella dagmatis ATCC
43325]
gi|260632825|gb|EEX50994.1| D-3-phosphoglycerate dehydrogenase [Pasteurella dagmatis ATCC
43325]
Length = 410
Score = 69.3 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + G++ + + +NIA +L S + +
Sbjct: 326 VNFPEVSLPEHSGTKRLLHIHHNKPGVLNQINQVFVNANVNIAAQYLQTDPSIGYV--VI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ +S+L +L +
Sbjct: 384 DVETEETSSLLTQLKEIDGTIRARVL 409
>gi|194365564|ref|YP_002028174.1| D-3-phosphoglycerate dehydrogenase [Stenotrophomonas maltophilia
R551-3]
gi|194348368|gb|ACF51491.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Stenotrophomonas maltophilia R551-3]
Length = 413
Score = 69.3 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 29/86 (33%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ V I + +NI L + + +
Sbjct: 327 VNFPEVTLPEHADSLRLLHIHQNVPGVLSKVNEIFSRHNVNIDGQFLRTDPKVGYVVIDI 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+V ++L+ +
Sbjct: 387 TASEEQAAAVRDELAAIPGTLRTRIL 412
>gi|94501974|ref|ZP_01308482.1| Phosphoglycerate dehydrogenase and related dehydrogenase
[Oceanobacter sp. RED65]
gi|94425916|gb|EAT10916.1| Phosphoglycerate dehydrogenase and related dehydrogenase
[Oceanobacter sp. RED65]
Length = 409
Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 28/86 (32%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ I ++ + G++ + I E IN+ L S + +
Sbjct: 325 VNFPEVALPQHGNFHRILHIHKNQPGVLNAINTIFAENNINVLGQFLQTSADIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ S LEK+ +
Sbjct: 383 DVEESAGELALEKVQEVEATIRARIL 408
>gi|289622714|emb|CBI50983.1| unnamed protein product [Sordaria macrospora]
Length = 623
Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 35/131 (26%), Gaps = 34/131 (25%)
Query: 1 VFSDGKPRFIKIQEIN-FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR- 58
V S K+ + ++ + N D G + VG ++G + INI +
Sbjct: 493 VTSGSDIFISKLDRFAGANFQPEGTLLVLRNYDRPGKIGGVGMVVGRHDINIRFMQVAGL 552
Query: 59 ------------------SQSTE--------------HAISFLCIDGSILNSVLEKLSVN 86
A+ L ++G + V+ +L
Sbjct: 553 SGGGGDGTKRRARPVGTVETRGGEETETLEETEEDSREALMILGVEGDVTEEVVRELEGQ 612
Query: 87 VTIRFVKQFEF 97
I V
Sbjct: 613 EGILDVSLVRL 623
>gi|289208385|ref|YP_003460451.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Thioalkalivibrio sp. K90mix]
gi|288944016|gb|ADC71715.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Thioalkalivibrio sp. K90mix]
Length = 387
Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + D I +VN ++ V + ++LGE +NI HL
Sbjct: 298 NGNVVNSVNLPTLVLDRKGD-TRIAVVNRNLPDRVARISHVLGESNLNI--LHLMNDSRG 354
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + L +DG S L+ L + +
Sbjct: 355 DLAYTLLDVDGKPDPSTLDALLQIDGVLRARVL 387
>gi|220934709|ref|YP_002513608.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Thioalkalivibrio sp. HL-EbGR7]
gi|219996019|gb|ACL72621.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Thioalkalivibrio sp. HL-EbGR7]
Length = 387
Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 4 DGKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+G R + + E+ G + ++N ++ +V + +ILG+ +NI H
Sbjct: 298 NGNVRNSVNLPEVFLP-RAGDSRLAVINRNLPDMVGQISHILGKASLNIVHMV--NESRG 354
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A + + ++G I ++S + V+
Sbjct: 355 AIAYTIMDVEGEITEDAAREISAIDGVLRVRVL 387
>gi|271502126|ref|YP_003335152.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Dickeya dadantii Ech586]
gi|270345681|gb|ACZ78446.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Dickeya dadantii Ech586]
Length = 410
Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ R + ++ + GI+ + NI E GINIA +L S + + +
Sbjct: 325 VNFPEVSLPTHSDRASRLLHIHENRPGIMTQINNIFAEQGINIAAQYLQTSPTIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ DG+ ++ L+ + +
Sbjct: 385 VETDGA--DTALQLMKSIPGTIRARLL 409
>gi|328949088|ref|YP_004366425.1| phosphoglycerate dehydrogenase [Treponema succinifaciens DSM 2489]
gi|328449412|gb|AEB15128.1| Phosphoglycerate dehydrogenase [Treponema succinifaciens DSM 2489]
Length = 392
Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
+ G +CI + + G+V ILGE +NI E A + + + G +
Sbjct: 315 PIPCGGTRLCISHKNEPGLVAQFTTILGEANLNIEGMV--NQNRCEVAYNIIDVAGKVTE 372
Query: 78 SVLEKLSVNVTIRFVKQF 95
LE L+ + V+
Sbjct: 373 QTLENLAAIKDVTKVRPI 390
>gi|330432255|gb|AEC17314.1| D-3-phosphoglycerate dehydrogenase [Gallibacterium anatis UMN179]
Length = 412
Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ ++ + GI+ + I + G+NIA +L ++ + + ++ S+ +KL
Sbjct: 343 RLLHIHHNRPGILNKINQIFVDNGVNIAAQYLQTDEAIGYV--VIDVESENTESLQQKLK 400
Query: 85 VNVTIRFVKQF 95
+
Sbjct: 401 QIDGTIKARVL 411
>gi|258574947|ref|XP_002541655.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901921|gb|EEP76322.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 568
Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 32/113 (28%), Gaps = 23/113 (20%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS- 61
S + ++ ++ N D G + VG+ILG+ G+NI +
Sbjct: 451 SGSQIVISRLGRFATSFVPEGRLLICHNYDSPGKIGVVGSILGKGGVNINFMSVAPVSKK 510
Query: 62 ----------------------TEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A+ L +D + ++ L +
Sbjct: 511 LLEEDAAREQGQKLYDHSGNGTNTEALMILGVDRPVSQDIVTTLVNAGGVLSA 563
>gi|212695779|ref|ZP_03303907.1| hypothetical protein ANHYDRO_00312 [Anaerococcus hydrogenalis DSM
7454]
gi|212677212|gb|EEB36819.1| hypothetical protein ANHYDRO_00312 [Anaerococcus hydrogenalis DSM
7454]
Length = 218
Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I + + + + I + G++ F+ N+L ++ NI +
Sbjct: 127 GGGNIMINQIMDNDVEYNGKNPTIICTYPEQKGMIAFISNVLFDHNYNIKNMK--TMHKG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +D + V +++ F+K
Sbjct: 185 GIIMLIVELDQDLEEDVYKEIEAGKNFEFIKYL 217
>gi|291562578|emb|CBL41394.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[butyrate-producing bacterium SS3/4]
Length = 388
Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I +++A+I ++ + +IL GINIA+ ++A + L ++ + + L
Sbjct: 318 RIGLLHANIPNMIGQITSILAAEGINIANMT--NKSRDKYAYTLLDLENPVKEEAVAHLE 375
Query: 85 VNVTIRFVKQFE 96
+ V+ +
Sbjct: 376 KISGMYKVRVIK 387
>gi|291165640|gb|EFE27689.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Filifactor alocis ATCC 35896]
Length = 222
Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 33/94 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + I I + G I + + G++ V IL + NI ++ T
Sbjct: 128 GGGAMVIVNINGIKVEYCGGYPTILLQYNEQKGVIASVSTILLDNNYNIETIMTHKNTLT 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ +D I ++V E++ K E
Sbjct: 188 NVVTLTIEVDSKITDTVKEQIGNTNRFLTQKYVE 221
>gi|119944373|ref|YP_942053.1| D-3-phosphoglycerate dehydrogenase [Psychromonas ingrahamii 37]
gi|119862977|gb|ABM02454.1| D-3-phosphoglycerate dehydrogenase [Psychromonas ingrahamii 37]
Length = 409
Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
E++ V + + ++ ++ GI+ + EYGINIA +L + + + +
Sbjct: 326 NFPEVSLPVHVDASRLLHIHKNMPGILTKINLTFEEYGINIAAQYLQTNANIGYV--VID 383
Query: 71 IDGSILNSVLEKLSVNVTIRFVKQFE 96
++ L KL+ +
Sbjct: 384 VNSDDAQLALAKLNEIEGTIKARLLR 409
>gi|313114888|ref|ZP_07800386.1| 4-phosphoerythronate dehydrogenase [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310622765|gb|EFQ06222.1| 4-phosphoerythronate dehydrogenase [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 386
Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + E+N G ICI++ + G++ + + E G+NI +
Sbjct: 297 NGNIIHSVNMPEVN-QPRAGGKRICIIHKNEPGMISQITALTTEAGLNIENMV--NKSKK 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A + L G++ + EKL+ + V+
Sbjct: 354 NMAYTMLDATGAVDKKLAEKLAAIPAVIRVRIL 386
>gi|322834199|ref|YP_004214226.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Rahnella sp. Y9602]
gi|321169400|gb|ADW75099.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Rahnella sp. Y9602]
Length = 412
Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E + + + ++ + G++ + I E GINIA +L S + +
Sbjct: 325 VNFPEASLPAHTEKASRLLHIHENRPGVLTSINQIFAEQGINIAAQYLQTSPEIGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
D + L + L+ + +
Sbjct: 385 AETDINTLTTALQLMKAIPGTIRARLL 411
>gi|169351328|ref|ZP_02868266.1| hypothetical protein CLOSPI_02108 [Clostridium spiroforme DSM 1552]
gi|169291550|gb|EDS73683.1| hypothetical protein CLOSPI_02108 [Clostridium spiroforme DSM 1552]
Length = 398
Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + +N + ++ +CI+N ++ I+ + + +Y +NI +
Sbjct: 306 NGNIINSVNFPGVN-QARVSKVRLCIINKNVPNILASISKLFADYNLNIENMV--NRSRG 362
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E+A + + + + ++EK+ + I V+
Sbjct: 363 EYAYTLIDTNDDVCKDIIEKIETSKGIISVRSI 395
>gi|325845876|ref|ZP_08169074.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481782|gb|EGC84814.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 218
Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I + + + + I + G++ F+ N+L ++ NI +
Sbjct: 127 GGGNIMINQIMDNDVEYNGKNPTIICTYPEQKGMIAFISNVLFDHNYNIKNMK--TMHKG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +D + V +++ F+K
Sbjct: 185 GIIMLIVELDQDLEEDVYKEIEAGKNFEFIKYL 217
>gi|291459109|ref|ZP_06598499.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Oribacterium sp. oral taxon 078 str. F0262]
gi|291418363|gb|EFE92082.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Oribacterium sp. oral taxon 078 str. F0262]
Length = 392
Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 34/95 (35%), Gaps = 3/95 (3%)
Query: 3 SDGKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+G R + + + + R I +++ +I ++ + +L INI +
Sbjct: 295 DNGNIRNSVNYPDCDMGICQSRERIALLHKNIPNMLGQITAVLARREINIENML--NRGR 352
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + L + + S + +L I +
Sbjct: 353 GGFAYTLLDLGKPVEESDVRELEAIEGIIRFRLVS 387
>gi|239628340|ref|ZP_04671371.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518486|gb|EEQ58352.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 387
Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
Query: 4 DGKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+G R + + + + +++ +I ++ V L G+NI+
Sbjct: 296 NGNIRNSVNYPSCDMGICQTESRVAVLHMNIPNMIGQVTGTLASQGVNISDMT--NKSRD 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A + L ++ S +EKL + V+ +
Sbjct: 354 KYAYTLLDLEHKAEESTIEKLRAIKGVLRVRVVK 387
>gi|254282685|ref|ZP_04957653.1| D-3-phosphoglycerate dehydrogenase [gamma proteobacterium NOR51-B]
gi|219678888|gb|EED35237.1| D-3-phosphoglycerate dehydrogenase [gamma proteobacterium NOR51-B]
Length = 395
Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 4/92 (4%)
Query: 5 GKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + I + I I N + G++ + +LG+ IN+
Sbjct: 301 GNIRNSVNFPTIELERT-QGCRIAITNLNEPGVLSHILTLLGDNEINVVDML--NKSRDS 357
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A + + ID + ++++L + V+
Sbjct: 358 IAYNLIDIDTAPGVDLVQQLEQVEGVVNVRVI 389
>gi|90406855|ref|ZP_01215047.1| Phosphoglycerate dehydrogenase [Psychromonas sp. CNPT3]
gi|90312092|gb|EAS40185.1| Phosphoglycerate dehydrogenase [Psychromonas sp. CNPT3]
Length = 409
Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 2/86 (2%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
E++ + ++ + GI+ + + INIA +L + + + +
Sbjct: 326 NFPEVSLPEHKNACRLLHIHHNQPGILTKINLAFAQSNINIAAQYLQTNANIGYV--VID 383
Query: 71 IDGSILNSVLEKLSVNVTIRFVKQFE 96
I+ L KL + +
Sbjct: 384 INSDDSQLALSKLKEIEGTIRARLLK 409
>gi|88704743|ref|ZP_01102456.1| D-3-phosphoglycerate dehydrogenase [Congregibacter litoralis KT71]
gi|88701064|gb|EAQ98170.1| D-3-phosphoglycerate dehydrogenase [Congregibacter litoralis KT71]
Length = 392
Score = 68.5 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I+ + + I N ++ ++ + I+ ++ INI E A + +
Sbjct: 304 VNFPNISLP-RATPVRVTITNRNVPKVLNQITAIIADHDINIVDML--NKSRAEIAYNII 360
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ LE L + V+
Sbjct: 361 DLEACPSEDSLEALRSIEEVINVRVI 386
>gi|315499113|ref|YP_004087917.1| had-superfamily hydrolase, subfamily ib (pspase-like)
[Asticcacaulis excentricus CB 48]
gi|315417125|gb|ADU13766.1| HAD-superfamily hydrolase, subfamily IB (PSPase-like)
[Asticcacaulis excentricus CB 48]
Length = 642
Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + GR ++ ++ G++ + NI+ +Y +NI HL ++ + +
Sbjct: 558 VNMPNVQLSEVEGRHRFLHIHQNVPGVMAAINNIIAKYNLNILAQHLKTNEQLGYV--IV 615
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D L++L +
Sbjct: 616 DVDRGYSREALDELKAVTGTLKFRSL 641
>gi|282881863|ref|ZP_06290514.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Peptoniphilus lacrimalis 315-B]
gi|300813292|ref|ZP_07093649.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Peptoniphilus sp. oral taxon 836 str. F0141]
gi|281298272|gb|EFA90717.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Peptoniphilus lacrimalis 315-B]
gi|300512617|gb|EFK39760.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 221
Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 36/94 (38%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + I I + D + + GI+ + +IL + NI + + T
Sbjct: 127 GGGNMIIVDINGIQVEFDGTHPTLLFRYNEQKGIISEISSILYKNDYNIESINTIKDDLT 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E + +D ++ +++KL+ N K E
Sbjct: 187 EIVNLTIELDQNLSIDLVKKLTTNSKFLMAKYVE 220
>gi|229820915|ref|YP_002882441.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Beutenbergia cavernae DSM 12333]
gi|229566828|gb|ACQ80679.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Beutenbergia cavernae DSM 12333]
Length = 401
Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ + + D G I ++ + G++ + L ++G N+ + LG +A
Sbjct: 314 VNVPGLVLDAPRPGTRRIAHLHRNTPGVLALLNETLAQHGTNVEYQVLGTRGEIGYA--V 371
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ G + V+++L V+
Sbjct: 372 TDVGGEVPRGVVDELHEMPHTIRVRLL 398
>gi|302387976|ref|YP_003823798.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Clostridium saccharolyticum WM1]
gi|302198604|gb|ADL06175.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Clostridium saccharolyticum WM1]
Length = 387
Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 35/95 (36%), Gaps = 3/95 (3%)
Query: 3 SDGKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+G R + + + I +++ +I ++ + L +NI+
Sbjct: 295 DNGNIRNSVNFPYCDMGICKAASRIAVLHLNIPNMIGQISGTLAAGDVNISDMT--NKSR 352
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A + L ++ ++KL + V+ +
Sbjct: 353 EKYAYTLLDLESVPDEESIQKLKAIKGVLRVRIVK 387
>gi|116624992|ref|YP_827148.1| D-3-phosphoglycerate dehydrogenase [Candidatus Solibacter usitatus
Ellin6076]
gi|116228154|gb|ABJ86863.1| D-3-phosphoglycerate dehydrogenase [Candidatus Solibacter usitatus
Ellin6076]
Length = 412
Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G+ + ++ + G++ + + E INIA +L + + +
Sbjct: 325 VNFPEVSLPEHPGKHRVLHIHHNQPGVLSAINAVFSEDAINIAAEYLQTDAKVGYVVIDV 384
Query: 70 CIDG-SILNSVLEKLSVNVTIRFVKQF 95
D ++ KL + +
Sbjct: 385 ETDERDETANIRRKLELVPGTIRTRIL 411
>gi|229113595|ref|ZP_04243043.1| L-serine dehydratase, beta chain [Bacillus cereus Rock1-15]
gi|228669894|gb|EEL25289.1| L-serine dehydratase, beta chain [Bacillus cereus Rock1-15]
Length = 219
Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 37/89 (41%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G+ + I++ + + I+N + + V +L INI+ + R ++
Sbjct: 126 GGGRVKIIEVNGFELKLRDTTPALLIMNNNHFSTISSVIALLSRCKINISTVRISRKETG 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRF 91
+ ++ + + ++ V+ +++ I
Sbjct: 186 KLSLLIIETEKPLVPEVIREINKLSGIHQ 214
>gi|220922815|ref|YP_002498117.1| NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
[Methylobacterium nodulans ORS 2060]
gi|219947422|gb|ACL57814.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Methylobacterium nodulans ORS 2060]
Length = 414
Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 28/87 (32%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V +I G++ + ++ GINIA E +
Sbjct: 326 VNFPQVQLAARPLGTRYIHVQRNIPGMLRRLNDVFASNGINIAAQFYQTD--GEVGYVVI 383
Query: 70 CIDG-SILNSVLEKLSVNVTIRFVKQF 95
D +++LE++ +
Sbjct: 384 ETDALGDADALLEEIRELEGTIRARLL 410
>gi|219670580|ref|YP_002461015.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Desulfitobacterium hafniense DCB-2]
gi|219540840|gb|ACL22579.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Desulfitobacterium hafniense DCB-2]
Length = 387
Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + V I I + +I ++ + L + +NI+ L +A + +
Sbjct: 303 VNFPNCDMGVCNQAGRIAINHKNIPNMLGQFTSTLAKENVNISD--LMNKSKGSYAYTLI 360
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
I+ ++ KL + V+ +
Sbjct: 361 DIETPAAPEMITKLKEIDGVLKVRVIK 387
>gi|188582224|ref|YP_001925669.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Methylobacterium populi BJ001]
gi|179345722|gb|ACB81134.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Methylobacterium populi BJ001]
Length = 416
Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 33/89 (37%), Gaps = 4/89 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ +G + V+ ++ G++ + +NIA +L E +
Sbjct: 326 VNFPQVQIPPRVGGVRFMHVHRNVPGVLGHINQAFARRDVNIASQYL--QTEGELGYVVV 383
Query: 70 CIDGSILN--SVLEKLSVNVTIRFVKQFE 96
D + + S+L +L+ + +
Sbjct: 384 EADTAPADRASILAELNAIEGTVRTRLIQ 412
>gi|240277875|gb|EER41382.1| D-3-phosphoglycerate dehydrogenase [Ajellomyces capsulatus H143]
gi|325095932|gb|EGC49242.1| D-3-phosphoglycerate dehydrogenase [Ajellomyces capsulatus H88]
Length = 598
Score = 68.1 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 35/118 (29%), Gaps = 26/118 (22%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST--- 62
+P ++ ++ N D G + VG+ILG G+N+ +
Sbjct: 481 QPLISRLGRFATSFVPEGTLLICHNYDSPGKIGVVGSILGREGVNVNFMGVAPVSKGLVE 540
Query: 63 -----------------------EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ A+ L +D ++ +SV + L +
Sbjct: 541 GEKAVASSETNAHPDTRDKVVPEKEALMILGVDRAVEDSVAKALVEEGGVLSASVISL 598
>gi|163849667|ref|YP_001637710.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Methylobacterium extorquens PA1]
gi|218528216|ref|YP_002419032.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Methylobacterium chloromethanicum CM4]
gi|240136882|ref|YP_002961349.1| D-3-phosphoglycerate dehydrogenase [Methylobacterium extorquens
AM1]
gi|254558741|ref|YP_003065836.1| D-3-phosphoglycerate dehydrogenase [Methylobacterium extorquens
DM4]
gi|163661272|gb|ABY28639.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Methylobacterium extorquens PA1]
gi|218520519|gb|ACK81104.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Methylobacterium chloromethanicum CM4]
gi|240006846|gb|ACS38072.1| D-3-phosphoglycerate dehydrogenase [Methylobacterium extorquens
AM1]
gi|254266019|emb|CAX21769.1| D-3-phosphoglycerate dehydrogenase [Methylobacterium extorquens
DM4]
Length = 416
Score = 68.1 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ IG + V+ ++ G++ V G+NIA +L E +
Sbjct: 326 VNFPQVQIPPRIGGVRFLHVHRNVPGVLGHVNQAFARRGVNIASQYL--QTEGELGYVVV 383
Query: 70 CIDGSILNS--VLEKLSVNVTIRFVKQFE 96
D + + +L +L + +
Sbjct: 384 EADAAPADRAGILAELDAIDGTVRTRLIQ 412
>gi|331700661|ref|YP_004397620.1| phosphoglycerate dehydrogenase [Lactobacillus buchneri NRRL
B-30929]
gi|329128004|gb|AEB72557.1| Phosphoglycerate dehydrogenase [Lactobacillus buchneri NRRL
B-30929]
Length = 388
Score = 68.1 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + + + +++ +I +V + +L + GINI + + A + +
Sbjct: 301 VNLPNLQVPFN-TPYRLTLIHKNIPNMVGQIATLLADAGINIESM--SNAARKDVAYTIV 357
Query: 70 CIDGSILNS---VLEKLSVNVTIRFVKQFE 96
+D ++++LS + V+ +
Sbjct: 358 DLDNLNNEEEHQLVDRLSKIDAVFRVRVLQ 387
>gi|332142377|ref|YP_004428115.1| D-3-phosphoglycerate dehydrogenase [Alteromonas macleodii str.
'Deep ecotype']
gi|327552399|gb|AEA99117.1| D-3-phosphoglycerate dehydrogenase [Alteromonas macleodii str.
'Deep ecotype']
Length = 409
Score = 68.1 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ R + V+ + GI+ + E GINI +L + + +
Sbjct: 325 VNFPEVSLPEHTNRSRLLHVHKNQPGILTQINQAFAEKGINIEAQYLQTNAEIGYV--VV 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ L +L +
Sbjct: 383 DVKEDRGYEALAELQQIDGTIKTRILH 409
>gi|229826261|ref|ZP_04452330.1| hypothetical protein GCWU000182_01633 [Abiotrophia defectiva ATCC
49176]
gi|229789131|gb|EEP25245.1| hypothetical protein GCWU000182_01633 [Abiotrophia defectiva ATCC
49176]
Length = 388
Score = 68.1 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I + I +++ +I ++ +L Y +NI ++A S
Sbjct: 303 VNYPNCEVAKLISKARITLLHKNIPSMITKFTTVLSSYNVNIEEMV--NKSRGDYAYSVF 360
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
ID + + + L + V+ +
Sbjct: 361 DIDTEVTEEMKKALEEIEGVLKVRAIQ 387
>gi|163753519|ref|ZP_02160643.1| phosphoserine phosphatase and phosphoglycerate dehydrogenase
(D-3-phosphoglycerate dehydrogenase) fusion [Kordia
algicida OT-1]
gi|161327251|gb|EDP98576.1| phosphoserine phosphatase and phosphoglycerate dehydrogenase
(D-3-phosphoglycerate dehydrogenase) fusion [Kordia
algicida OT-1]
Length = 630
Score = 68.1 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 27/93 (29%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S + I ++ ++ GI+ V +L +Y +N+ +L
Sbjct: 539 SGNTVDAVNFPNIRLPRQTNAHRFLHIHKNVPGIMAKVNKVLAKYELNVTGQYLSTDSKV 598
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +D V L +
Sbjct: 599 GYV--IVDVDKEYNKKVTSALKKIENTIKFRIL 629
>gi|226289513|gb|EEH45017.1| D-3-phosphoglycerate dehydrogenase [Paracoccidioides brasiliensis
Pb18]
Length = 598
Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 26/118 (22%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL--------- 56
+P ++ ++ N D G + VG+ILG+ G+NI +
Sbjct: 481 QPLISRLGRFTTSFAPEGTLLICHNYDSPGKIGVVGSILGKEGVNINFMGVAPVSKSLLV 540
Query: 57 -----------------GRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
G + + A+ L +D ++ ++V++ L V
Sbjct: 541 APTNKSLGEVKAGLDETGSYEPEKEALMILGVDRTVEDNVVKALVEEGGALSVSVLSL 598
>gi|239995914|ref|ZP_04716438.1| D-3-phosphoglycerate dehydrogenase [Alteromonas macleodii ATCC
27126]
Length = 409
Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ GR + V+ + GI+ + E GINI +L + + +
Sbjct: 325 VNFPEVSLPEHTGRSRLLHVHKNQPGILTQINQAFAEKGINIEAQYLQTNAEIGYV--VV 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ L +L +
Sbjct: 383 DVKEDRGYEALAELQQIDGTIKTRILH 409
>gi|188534927|ref|YP_001908724.1| D-3-phosphoglycerate dehydrogenase [Erwinia tasmaniensis Et1/99]
gi|188029969|emb|CAO97853.1| D-3-phosphoglycerate dehydrogenase [Erwinia tasmaniensis Et1/99]
Length = 412
Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 30/87 (34%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E + + + ++ + G++ + I E GINI +L + + +
Sbjct: 325 VNFPEASLPMHGANASRLMHIHENRPGVLTAINQIFAEQGINILAQYLQTTPKMGYVVID 384
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ I + L+ + +
Sbjct: 385 VEAPQEIADKALQLMKSIPGTVRTRLL 411
>gi|302874892|ref|YP_003843525.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Clostridium cellulovorans 743B]
gi|307690491|ref|ZP_07632937.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Clostridium cellulovorans 743B]
gi|302577749|gb|ADL51761.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Clostridium cellulovorans 743B]
Length = 387
Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + V I I + +I ++ +L E INI+ A + +
Sbjct: 303 VNYPNCDMGVCTKAARITINHKNIPNMLGQFTTVLAEENINISDMT--NKSKGNWAYTMI 360
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
I+ ++++E++S + V+ +
Sbjct: 361 DIESLATDNIVERISSIDGVVNVRIIK 387
>gi|145636267|ref|ZP_01791936.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittHH]
gi|145270432|gb|EDK10366.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittHH]
Length = 410
Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 386 ETNDASP--LLTKLKEIDGTIRARVL 409
>gi|6094258|sp|P33074|SDHB_PEPAS RecName: Full=L-serine dehydratase, beta chain; Short=SDH; AltName:
Full=L-serine deaminase; Short=L-SD
gi|2315865|gb|AAC45545.1| beta-subunit of L-serine dehydratase [Peptoniphilus
asaccharolyticus]
Length = 222
Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 33/94 (35%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + + I I + I + + G++ +V ++L NI + +++ T
Sbjct: 128 GGGAMKIVNINGIAIEFRGEYSTILLEYPEQRGVISYVSSLLTGSEYNIESLNTKKNKLT 187
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ ID + S+ + K E
Sbjct: 188 NIVTLTVEIDKPLTESLKSAILGVERFTTAKYVE 221
>gi|289523663|ref|ZP_06440517.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503355|gb|EFD24519.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 214
Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 32/81 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I + + I + D G+V V ++ E G+NIA L R
Sbjct: 113 GGGVIELQEIDGFSISLSGDLAAIITFHRDQPGVVAAVAGVMAEKGLNIATMRLHRQGRG 172
Query: 63 EHAISFLCIDGSILNSVLEKL 83
A + IDG + S +++
Sbjct: 173 GKAAMVIEIDGELKESTKDEI 193
>gi|302670702|ref|YP_003830662.1| D-3-phosphoglycerate dehydrogenase SerA [Butyrivibrio
proteoclasticus B316]
gi|302395175|gb|ADL34080.1| D-3-phosphoglycerate dehydrogenase SerA [Butyrivibrio
proteoclasticus B316]
Length = 389
Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ I++ ++ ++ + LG G NI ++A + + ++ I ++++
Sbjct: 314 AGPRLAIIHKNVANMISQFTSFLGNAGYNIKDM--SNKSRGDYAYTLIDLEDEIEDAIVS 371
Query: 82 KLSVNVTIRFVKQFEFNV 99
K+ + V+ +V
Sbjct: 372 KIEKIDDVIRVRIVRKDV 389
>gi|213609981|ref|ZP_03369807.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 67
Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 25/66 (37%)
Query: 30 NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
+ + G++ + I E G+NIA +L S + + + DG + L +
Sbjct: 1 HENRPGVLTALNQIFAEQGVNIAAQYLQTSARMGYVVIDIEADGDVAEKALLAMKAIPGT 60
Query: 90 RFVKQF 95
+
Sbjct: 61 IRARLL 66
>gi|218132964|ref|ZP_03461768.1| hypothetical protein BACPEC_00825 [Bacteroides pectinophilus ATCC
43243]
gi|217991837|gb|EEC57841.1| hypothetical protein BACPEC_00825 [Bacteroides pectinophilus ATCC
43243]
Length = 387
Score = 68.1 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 4 DGKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+G R + + V I + + +I ++ + +LG G+NI+
Sbjct: 296 NGNIRNSVNYPACDMGVCTNTGRIAVCHKNIPSVISNITAVLGAAGVNISDML--NKSRN 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A S +D ++ V++KL + V+ +
Sbjct: 354 DYAYSLFDLDDAVNADVIKKLEEVEGVIKVRVVK 387
>gi|260582269|ref|ZP_05850062.1| phosphoglycerate dehydrogenase [Haemophilus influenzae NT127]
gi|260094637|gb|EEW78532.1| phosphoglycerate dehydrogenase [Haemophilus influenzae NT127]
Length = 410
Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 386 ETNDASP--LLTKLKEIDGTIRARVL 409
>gi|331012072|gb|EGH92128.1| D-3-phosphoglycerate dehydrogenase [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 427
Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + ++ +I G++ + + E GINI+ L ++ + +
Sbjct: 325 VNFPEVALPAHPGKHRLLHIHENIPGVLSEINKVFAENGINISGQFLQTNEKVGYV--VI 382
Query: 70 CIDGSILN 77
+D +
Sbjct: 383 DVDAEYSD 390
>gi|212715546|ref|ZP_03323674.1| hypothetical protein BIFCAT_00444 [Bifidobacterium catenulatum DSM
16992]
gi|212660913|gb|EEB21488.1| hypothetical protein BIFCAT_00444 [Bifidobacterium catenulatum DSM
16992]
Length = 276
Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + + +I I ++A++ G++ V ++LGE INIA LG
Sbjct: 184 FKGSTMLSVDLPQITLSDIRSNFRIAHLHANLPGVLAKVNHVLGEENINIAAQALGT--E 241
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E + L++L+ ++
Sbjct: 242 GEIGYVVTDVAQRPSQKALDELAAIEGTIRMRVIS 276
>gi|154488904|ref|ZP_02029753.1| hypothetical protein BIFADO_02213 [Bifidobacterium adolescentis
L2-32]
gi|154083041|gb|EDN82086.1| hypothetical protein BIFADO_02213 [Bifidobacterium adolescentis
L2-32]
Length = 399
Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + + +I I ++A++ G++ V +LGE GINIA LG
Sbjct: 307 FKGSTMLSVNLPQITLSDIKSNFRIAHLHANLPGVLARVNRVLGEDGINIAAQALGT--E 364
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E + L++L+ ++
Sbjct: 365 GEIGYVVTDVAQRPDQRALDQLASIEGTIRMRVIS 399
>gi|119026130|ref|YP_909975.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium adolescentis
ATCC 15703]
gi|118765714|dbj|BAF39893.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium adolescentis
ATCC 15703]
Length = 403
Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + + +I I ++A++ G++ V +LGE GINIA LG
Sbjct: 311 FKGSTMLSVNLPQITLSDIKSNFRIAHLHANLPGVLARVNRVLGEDGINIAAQALGT--E 368
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E + L++L+ ++
Sbjct: 369 GEIGYVVTDVAQRPDQRALDQLASIEGTIRMRVIS 403
>gi|237808127|ref|YP_002892567.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Tolumonas auensis DSM 9187]
gi|237500388|gb|ACQ92981.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Tolumonas auensis DSM 9187]
Length = 410
Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 32/87 (36%), Gaps = 3/87 (3%)
Query: 10 IKIQEINF-DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ ++ + ++ + G++ + + GINIA L + S +
Sbjct: 325 VNFPEVSLPELGRKTSRLLHIHRNQPGVLNKINQAFADEGINIAGQFLQTNASIGYV--V 382
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ ++ + L +L +
Sbjct: 383 IEVETEHSDIALARLKEIDGTLKARIL 409
>gi|68249067|ref|YP_248179.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae
86-028NP]
gi|68057266|gb|AAX87519.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae
86-028NP]
Length = 410
Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 386 ETNDASP--LLTKLKEIDGTIRARVL 409
>gi|319898016|ref|YP_004136213.1| d-3-phosphoglycerate dehydrogenase [Haemophilus influenzae F3031]
gi|317433522|emb|CBY81905.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae F3031]
Length = 410
Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 386 ETNDASP--LLTKLKEIDGTIRARVL 409
>gi|301169186|emb|CBW28783.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 10810]
Length = 410
Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 386 ETNDASP--LLTKLKEIDGTIRARVL 409
>gi|256546050|ref|ZP_05473403.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Anaerococcus vaginalis ATCC 51170]
gi|256398167|gb|EEU11791.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Anaerococcus vaginalis ATCC 51170]
Length = 218
Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 33/93 (35%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G +I + + + I + G++ F+ N+L ++ NI +
Sbjct: 127 GGGNIMINQIMDNEVEYNGKNPTIICTYPEQKGMIAFISNVLFDHNYNIKNMKTIN--KG 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +D + V +++ F+K
Sbjct: 185 NTIMLIVELDQDLEEEVYKEIEAGKNFEFIKYL 217
>gi|229846551|ref|ZP_04466659.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 7P49H1]
gi|229810644|gb|EEP46362.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 7P49H1]
Length = 410
Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 386 ETNDASP--LLTKLKEIDGTIRARVL 409
>gi|225680421|gb|EEH18705.1| D-3-phosphoglycerate dehydrogenase [Paracoccidioides brasiliensis
Pb03]
Length = 518
Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 26/118 (22%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL--------- 56
+P ++ ++ N D G + VG+ILG+ G+NI +
Sbjct: 401 QPLISRLGRFTTSFAPEGTLLICHNYDSPGKIGVVGSILGKEGVNINFMGVAPVSKSLLV 460
Query: 57 -----------------GRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
G + + A+ L +D ++ ++V++ L V
Sbjct: 461 GPTNKSLGEVKAGLDETGSYEPEKEALMILGVDRTVEDNVVKALVEEGGALSVSVLSL 518
>gi|257465215|ref|ZP_05629586.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus minor 202]
gi|257450875|gb|EEV24918.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus minor 202]
Length = 409
Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 28/86 (32%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++A+ GI+ + + + +NIA +L + +
Sbjct: 325 VNFPEVSLPTHDNTKRLLHIHANKPGILNKINQVFVDANVNIAGQYLQTDPEIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ L +L +
Sbjct: 383 DVQSEDTADFLARLKEIDGTIKTRVL 408
>gi|255038435|ref|YP_003089056.1| D-3-phosphoglycerate dehydrogenase [Dyadobacter fermentans DSM
18053]
gi|254951191|gb|ACT95891.1| HAD-superfamily hydrolase, subfamily IB (PSPase- like) [Dyadobacter
fermentans DSM 18053]
Length = 635
Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 9/86 (10%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + ++A++ G++ + I + INI +L ++ + +
Sbjct: 551 VNFPEVQLPKLKDSHRLLHIHANVPGVLAKLNQIFAKNNINITGQYLKTNEHIGYV--IV 608
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I ++++ +
Sbjct: 609 DIAKDYTEEFIQEVKEVEGTIRFRML 634
>gi|114331558|ref|YP_747780.1| D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
[Nitrosomonas eutropha C91]
gi|114308572|gb|ABI59815.1| D-3-phosphoglycerate dehydrogenase [Nitrosomonas eutropha C91]
Length = 405
Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 9/86 (10%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + + + NA++ ++ + + + G+NI + E A + +
Sbjct: 312 VNFPDVVME-RGTPFRVAVANANVPNLLGQISTRMADIGLNIHNMI--NKSRGEMAYTLV 368
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D ++ ++ ++ + V+
Sbjct: 369 DTDRAVPPEIINAIAQITGVLMVRYL 394
>gi|33598504|ref|NP_886147.1| D-3-phosphoglycerate dehydrogenase [Bordetella parapertussis 12822]
gi|33603448|ref|NP_891008.1| D-3-phosphoglycerate dehydrogenase [Bordetella bronchiseptica RB50]
gi|33574633|emb|CAE39284.1| D-3-phosphoglycerate dehydrogenase [Bordetella parapertussis]
gi|33577572|emb|CAE34837.1| D-3-phosphoglycerate dehydrogenase [Bordetella bronchiseptica RB50]
Length = 406
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+++ +G I V+ + G + + N++ ++G+NI L +A
Sbjct: 323 VNFPELSYQAPVGGSRIIHVHRNAPGALGALDNLMAQHGLNIVSQSLQTKGQIGYA--VT 380
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+DG + ++VL L + ++
Sbjct: 381 DVDGEVSDTVLADLRSHPVTVRCEKL 406
>gi|319775607|ref|YP_004138095.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae F3047]
gi|317450198|emb|CBY86414.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae F3047]
Length = 410
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 386 ETNDASP--LLTKLKEIDGTIRARVL 409
>gi|239917378|ref|YP_002956936.1| D-3-phosphoglycerate dehydrogenase [Micrococcus luteus NCTC 2665]
gi|281414138|ref|ZP_06245880.1| D-3-phosphoglycerate dehydrogenase [Micrococcus luteus NCTC 2665]
gi|239838585|gb|ACS30382.1| D-3-phosphoglycerate dehydrogenase [Micrococcus luteus NCTC 2665]
Length = 531
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + +V + ++ D G++ +G LG G+NIA + R A++
Sbjct: 441 KLVGVDRHELEVPLADHLLVFAYQDRPGVIGVLGQALGVQGVNIAGMDVSRDDE-GAALA 499
Query: 68 FLCIDGSILNSV 79
L +DG++
Sbjct: 500 VLTLDGALSGDT 511
>gi|145630356|ref|ZP_01786137.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae R3021]
gi|144984091|gb|EDJ91528.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae R3021]
Length = 410
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 386 ETNDASP--LLTKLKEIDGTIRARVL 409
>gi|289704780|ref|ZP_06501201.1| phosphoglycerate dehydrogenase [Micrococcus luteus SK58]
gi|289558496|gb|EFD51766.1| phosphoglycerate dehydrogenase [Micrococcus luteus SK58]
Length = 531
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + +V + ++ D G++ +G LG G+NIA + R A++
Sbjct: 441 KLVGVDRHELEVPLADHLLVFAYQDRPGVIGVLGQALGVQGVNIAGMDVSRDDE-GAALA 499
Query: 68 FLCIDGSILNSV 79
L +DG++
Sbjct: 500 VLTLDGALSGDT 511
>gi|148827662|ref|YP_001292415.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittGG]
gi|148718904|gb|ABR00032.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittGG]
Length = 410
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 386 ETNDASP--LLTKLKEIDGTIRARVL 409
>gi|261198128|ref|XP_002625466.1| phosphoglycerate dehydrogenase [Ajellomyces dermatitidis SLH14081]
gi|239595429|gb|EEQ78010.1| phosphoglycerate dehydrogenase [Ajellomyces dermatitidis SLH14081]
gi|239615717|gb|EEQ92704.1| phosphoglycerate dehydrogenase [Ajellomyces dermatitidis ER-3]
gi|327356769|gb|EGE85626.1| phosphoglycerate dehydrogenase [Ajellomyces dermatitidis ATCC
18188]
Length = 602
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 34/122 (27%), Gaps = 30/122 (24%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST--- 62
+P ++ ++ N D G + VG+ILG+ G+NI +
Sbjct: 481 QPLISRLGRFATSFVPDGTLLICHNYDSPGKIGVVGSILGKEGVNINFMGVAPVSKGLLE 540
Query: 63 ---------------------------EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ L +D ++ V++ L +
Sbjct: 541 CERIAATSEPKSQDMSQPDTRDKYEVEHEALMILGVDKAVEEGVVKALVEEGGVLSASVV 600
Query: 96 EF 97
Sbjct: 601 SL 602
>gi|145628841|ref|ZP_01784641.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 22.1-21]
gi|145638620|ref|ZP_01794229.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittII]
gi|144979311|gb|EDJ88997.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 22.1-21]
gi|145272215|gb|EDK12123.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittII]
gi|309750119|gb|ADO80103.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae R2866]
Length = 410
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 386 ETNDASP--LLTKLKEIDGTIRARVL 409
>gi|254558137|ref|YP_003065662.1| D-3-phosphoglycerate dehydrogenase [Methylobacterium extorquens
DM4]
gi|254265680|emb|CAX17018.1| D-3-phosphoglycerate dehydrogenase [Methylobacterium extorquens
DM4]
Length = 417
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 31/89 (34%), Gaps = 4/89 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ G + V+ ++ G++ V + +N+A +L + + +
Sbjct: 328 VNFPQVQIPPRQGGVRFLHVHRNVPGVLGRVNAAIARRDVNVAAQYLQTDGALGYV--VV 385
Query: 70 CIDGSILN--SVLEKLSVNVTIRFVKQFE 96
D + +L +L + +
Sbjct: 386 EADAPPPDLAGILAELRGIEGTVRARVIQ 414
>gi|145634538|ref|ZP_01790247.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittAA]
gi|145268083|gb|EDK08078.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittAA]
Length = 410
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 386 ETNDASP--LLTKLKEIDGTIRARVL 409
>gi|293401996|ref|ZP_06646136.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304654|gb|EFE45903.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 386
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + ++ + + ICI+N +I ++ V LG +GINI +
Sbjct: 295 NGNITHSVNLPDMQITQE-TKYRICIINKNIPDMISSVSTALGNHGINIENMAS--KGKK 351
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
++A + L + + ++++L I +
Sbjct: 352 DYAYTILETNDEVSEELVQRLQEREGIVMARLI 384
>gi|325831984|ref|ZP_08165081.1| 4-phosphoerythronate dehydrogenase [Eggerthella sp. HGA1]
gi|325486305|gb|EGC88757.1| 4-phosphoerythronate dehydrogenase [Eggerthella sp. HGA1]
Length = 413
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 39/98 (39%), Gaps = 6/98 (6%)
Query: 3 SDGKPRFIKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+ + + + +++A++ + + N+ G+ G+NI +
Sbjct: 318 NGNIANSVNYPACDMGPVPDGLRRVAVLHANVPNAIARITNVFGDAGVNIENMM--NKAR 375
Query: 62 TEHAISFLCIDGSI---LNSVLEKLSVNVTIRFVKQFE 96
E+A + L +D + +E+LS +R V+ +
Sbjct: 376 GENAYTMLDLDAGTPGHPDDAIERLSAIEGVRRVRVVK 413
>gi|145632731|ref|ZP_01788465.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 3655]
gi|229844375|ref|ZP_04464515.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 6P18H1]
gi|144986926|gb|EDJ93478.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 3655]
gi|229812624|gb|EEP48313.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 6P18H1]
Length = 410
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 386 ETNDASP--LLTKLKEIDGTIRARVL 409
>gi|33591404|ref|NP_879048.1| D-3-phosphoglycerate dehydrogenase [Bordetella pertussis Tohama I]
gi|33571046|emb|CAE40534.1| D-3-phosphoglycerate dehydrogenase [Bordetella pertussis Tohama I]
Length = 406
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+++ +G I V+ + G + + N++ ++G+NI L +A
Sbjct: 323 VNFPELSYQAPVGGSRIIHVHRNAPGALGALDNLMAQHGLNIVSQSLQTKGQIGYA--VT 380
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+DG + ++VL L + ++
Sbjct: 381 DVDGEVSDTVLADLRSHPVTVRCEKL 406
>gi|325568620|ref|ZP_08144913.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus ATCC 12755]
gi|325157658|gb|EGC69814.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus ATCC 12755]
Length = 394
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R + + + I+N ++ ++ + +I+ E GINI + + A +
Sbjct: 300 RSVNFPTVEMAFH-SPYRLTIINRNVPNMLGQISSIIAESGINIDNML--NRGREDFAYT 356
Query: 68 FLCI---DGSILNSVLEKLSVNVTIRFVKQFE 96
+ D ++LN + +KL N I V+ +
Sbjct: 357 LADVASEDEALLNQLADKLRENENIVRVRVIK 388
>gi|329122345|ref|ZP_08250932.1| D-3-phosphoglycerate dehydrogenase [Haemophilus aegyptius ATCC
11116]
gi|327473627|gb|EGF19046.1| D-3-phosphoglycerate dehydrogenase [Haemophilus aegyptius ATCC
11116]
Length = 410
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 386 ETNDASP--LLTKLKEIDGTIRARVL 409
>gi|302382818|ref|YP_003818641.1| HAD-superfamily hydrolase, subfamily IB (PSPase-like)
[Brevundimonas subvibrioides ATCC 15264]
gi|302193446|gb|ADL01018.1| HAD-superfamily hydrolase, subfamily IB (PSPase-like)
[Brevundimonas subvibrioides ATCC 15264]
Length = 630
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + G I ++ + G++ + L G+NI HL + T + I+
Sbjct: 546 VNLPNVQLSDVSGGHRILHIHRNQPGVMAELNRELSAAGLNILGQHLKTDERTGYVIT-- 603
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D L L +
Sbjct: 604 DVDRDYDPQALRVLKSVAGTLRFRLLH 630
>gi|15603536|ref|NP_246610.1| D-3-phosphoglycerate dehydrogenase [Pasteurella multocida subsp.
multocida str. Pm70]
gi|12722078|gb|AAK03755.1| SerA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 410
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ +G + ++ + G++ + + + +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHVGTKRLLHIHHNKQGVLNKINQVFVDANVNIAAQYLQTDPAIGYV--VI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ +S+L +L +
Sbjct: 384 DVETEDTHSLLTQLKEIEGTIRARVL 409
>gi|256826789|ref|YP_003150748.1| phosphoglycerate dehydrogenase-like oxidoreductase [Cryptobacterium
curtum DSM 15641]
gi|256582932|gb|ACU94066.1| phosphoglycerate dehydrogenase-like oxidoreductase [Cryptobacterium
curtum DSM 15641]
Length = 387
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Query: 11 KIQEINFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ V I +++ + +V + L E G NI+ HL + E A + +
Sbjct: 303 NFPAVQAPVLPEGAGRIALLHTNRPNMVGQITAALAEAGANIS--HLMNASRNEAAYTLI 360
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
D S+ L++L + ++
Sbjct: 361 DTDESVGKVPLDQLRAIEGVWRLRTIR 387
>gi|148825255|ref|YP_001290008.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittEE]
gi|148715415|gb|ABQ97625.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae PittEE]
Length = 410
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 386 ETNDASP--LLTKLKEIDGTIRARVL 409
>gi|309972378|gb|ADO95579.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae R2846]
Length = 410
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 386 ETNDASP--LLTKLKEIDGTIRARVL 409
>gi|2290989|gb|AAC46259.1| D-3-phosphoglycerate dehydrogenase homolog [Bordetella pertussis]
Length = 399
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+++ +G I V+ + G + + N++ ++G+NI L +A
Sbjct: 316 VNFPELSYQAPVGGSRIIHVHRNAPGALGALDNLMAQHGLNIVSQSLQTKGQIGYA--VT 373
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+DG + ++VL L + ++
Sbjct: 374 DVDGEVSDTVLADLRSHPVTVRCEKL 399
>gi|119504963|ref|ZP_01627040.1| Spermidine/putrescine ABC transporter ATP-binding subunit [marine
gamma proteobacterium HTCC2080]
gi|119459249|gb|EAW40347.1| Spermidine/putrescine ABC transporter ATP-binding subunit [marine
gamma proteobacterium HTCC2080]
Length = 395
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 4/92 (4%)
Query: 5 GKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + + + I I N ++ G + + +G+ IN+ L E
Sbjct: 301 GNIRNSVNFPRLELERT-TGSRIAITNTNLPGTLSHILTAIGDSQINVVD--LLNKSRDE 357
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A + + ++ + +LE+L + V+
Sbjct: 358 IAYNLIDLNTTPPADLLEQLRGIEGVINVRCI 389
>gi|27383076|ref|NP_774605.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizobium japonicum USDA
110]
gi|27356250|dbj|BAC53230.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizobium japonicum USDA
110]
Length = 432
Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 31/86 (36%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + V+ ++ G++ + + + INIA +L + + +
Sbjct: 344 VNFPEVQLHLRPSGARFSHVHRNVPGMLRRLNEVFLQRDINIAAQYLETAGDLGYVVLDA 403
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ G +L+++ +
Sbjct: 404 DLGGQDSGELLQQIRALDGTVGARLV 429
>gi|254517207|ref|ZP_05129264.1| D-3-phosphoglycerate dehydrogenase [gamma proteobacterium NOR5-3]
gi|219674045|gb|EED30414.1| D-3-phosphoglycerate dehydrogenase [gamma proteobacterium NOR5-3]
Length = 392
Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 32/93 (34%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + I + + I N ++ ++ + ++ E+ INI
Sbjct: 297 NGNIANSVNFPNIALPRT-TPVRVTITNRNVPKVLNQITAVIAEHDINIVDML--NKSRA 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + + ++ + LE L + V+
Sbjct: 354 DLAYNIIDLEACPTDDSLEALRSIEEVINVRVL 386
>gi|89897429|ref|YP_520916.1| hypothetical protein DSY4683 [Desulfitobacterium hafniense Y51]
gi|89336877|dbj|BAE86472.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 387
Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + V I I + +I ++ + L + +NI+ L +A + +
Sbjct: 303 VNFPNCDMGVCNQAGRIAINHKNIPNMLGQFTSTLAKENVNISD--LMNKSKGSYAYTLI 360
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
I+ ++ +L + V+ +
Sbjct: 361 DIETPAGPDIITRLKEIDGVLKVRVIK 387
>gi|16272413|ref|NP_438626.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae Rd KW20]
gi|260580472|ref|ZP_05848300.1| phosphoglycerate dehydrogenase [Haemophilus influenzae RdAW]
gi|1173427|sp|P43885|SERA_HAEIN RecName: Full=D-3-phosphoglycerate dehydrogenase; Short=PGDH
gi|1573443|gb|AAC22124.1| D-3-phosphoglycerate dehydrogenase (serA) [Haemophilus influenzae
Rd KW20]
gi|260092814|gb|EEW76749.1| phosphoglycerate dehydrogenase [Haemophilus influenzae RdAW]
Length = 410
Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDPKIGYVVVDV 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 386 ETNDASP--LLTKLKEIDGTIRARVL 409
>gi|291520565|emb|CBK75786.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Butyrivibrio fibrisolvens 16/4]
Length = 387
Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 10/94 (10%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + + + I++ + G++ IL +N+
Sbjct: 296 NGNITHSVNYPDCDMGICTAESRVAILHKNKAGLIASFTTILSNENVNVDDMT--NKSRG 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A + L + + +SV+ ++ + V+ +
Sbjct: 354 DYAYTLLDLGSKLSDSVVSEIEKVEGVIKVRVVK 387
>gi|78484972|ref|YP_390897.1| D-3-phosphoglycerate dehydrogenase [Thiomicrospira crunogena XCL-2]
gi|78363258|gb|ABB41223.1| D-3-phosphoglycerate dehydrogenase [Thiomicrospira crunogena XCL-2]
Length = 409
Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
E++ R + ++ + GI+ + GIN+A +L + + +
Sbjct: 326 NFPEVSLPEHKDRSRLLHIHKNQPGIMTKINEAFAHKGINVAAQYLQTNAEIGYV--VID 383
Query: 71 IDGSILNSVLEKLSVNVTIRFVKQFE 96
I+ + L++L +
Sbjct: 384 INSEDREAGLKELKAIEGTIRTRVLH 409
>gi|111610291|gb|ABH11649.1| phosphoglycerate dehydrogenase [Lactobacillus helveticus CNRZ32]
gi|328468624|gb|EGF39623.1| phosphoglycerate dehydrogenase [Lactobacillus helveticus MTCC 5463]
Length = 388
Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 34/96 (35%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + + I +++ +I +V + L GINI + +
Sbjct: 295 GNIQNSVNLPNLQVPFQ-APYRITLIHKNIPNMVGQIATALANAGINIKSM--SNAARKD 351
Query: 64 HAISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
A + + +D N ++EKL + V+ +
Sbjct: 352 IAYTMIDLDNLKNEEDNKLIEKLGKIDAVFRVRVLK 387
>gi|322513331|ref|ZP_08066451.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus ureae ATCC
25976]
gi|322120885|gb|EFX92739.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus ureae ATCC
25976]
Length = 429
Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Query: 10 IKIQEINFDV-DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + GI+ + + + +NIA +L + + +
Sbjct: 344 VNFPEVSLPILHSDAKRLLHIHENRPGILNKINQVFVDGNVNIAGQYLQTDPNIGYVVID 403
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ +D + + LE+L +
Sbjct: 404 VELDDA--SEALERLQQIDGTIKARVIS 429
>gi|317488569|ref|ZP_07947114.1| D-isomer specific 2-hydroxyacid dehydrogenase [Eggerthella sp.
1_3_56FAA]
gi|316912311|gb|EFV33875.1| D-isomer specific 2-hydroxyacid dehydrogenase [Eggerthella sp.
1_3_56FAA]
Length = 391
Score = 67.4 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 38/98 (38%), Gaps = 6/98 (6%)
Query: 3 SDGKPRFIKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+ + + + +++A++ + + N+ G+ G+NI +
Sbjct: 296 NGNIANSVNYPACDMGPVPDGLRRVAVLHANVPNAIARITNVFGDAGVNIENMM--NKAR 353
Query: 62 TEHAISFLCIDGSI---LNSVLEKLSVNVTIRFVKQFE 96
E A + L +D + +E+LS +R V+ +
Sbjct: 354 GEKAYTMLDLDAGTPGHPDDAIERLSAIEGVRRVRVVK 391
>gi|308125687|ref|ZP_07663478.1| phosphoglycerate dehydrogenase [Vibrio parahaemolyticus K5030]
gi|308111086|gb|EFO48626.1| phosphoglycerate dehydrogenase [Vibrio parahaemolyticus K5030]
Length = 72
Score = 67.4 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ + + GI+ + I E GINIA +L + + ++ L KL
Sbjct: 4 LTAHSQNRPGILTQINTIFAEEGINIAAQYLQTEAEIGYV--VIDVETERSEEALTKLKS 61
Query: 86 NVTIRFVKQFE 96
+
Sbjct: 62 IEGTIRARILH 72
>gi|119476197|ref|ZP_01616549.1| D-isomer specific 2-hydroxyacid dehydrogenase [marine gamma
proteobacterium HTCC2143]
gi|119450824|gb|EAW32058.1| D-isomer specific 2-hydroxyacid dehydrogenase [marine gamma
proteobacterium HTCC2143]
Length = 393
Score = 67.4 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Query: 10 IKIQEINFDVDI--GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + G + + I N ++ I+ + +IL + IN+ + A +
Sbjct: 307 VNFPPLYLERTPQSGSVRLSISNRNVPKILGSILSILADENINVIDML--NKSREDIAYN 364
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + S VLE + + V+
Sbjct: 365 LIDLQSSPPEQVLEIMRKIDGVVNVRLI 392
>gi|221133830|ref|ZP_03560135.1| D-3-phosphoglycerate dehydrogenase [Glaciecola sp. HTCC2999]
Length = 409
Score = 67.4 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 8/87 (9%), Positives = 30/87 (34%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + ++ + G++ + INIA +L +++ + +
Sbjct: 325 VNFPEVSLPGHNKHSRLLHIHKNAPGVLTQINQAFASQNINIAAQYLQTNENIGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + +L+ +
Sbjct: 383 DVETDRADDAFAQLTQIDGTIKTRILH 409
>gi|257877286|ref|ZP_05656939.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus EC20]
gi|257811452|gb|EEV40272.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus EC20]
Length = 394
Score = 67.0 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R + + + I+N ++ ++ + +I+ E GINI + + A +
Sbjct: 300 RSVNFPTVEMAFH-SPYRLTIINRNVPNMLGQISSIIAESGINIDNML--NRGREDFAYT 356
Query: 68 FLCI---DGSILNSVLEKLSVNVTIRFVKQFE 96
+ D +LN + +KL N I V+ +
Sbjct: 357 LADVASEDEVLLNQLADKLRENENIVRVRVIK 388
>gi|167855374|ref|ZP_02478141.1| D-3-phosphoglycerate dehydrogenase [Haemophilus parasuis 29755]
gi|167853522|gb|EDS24769.1| D-3-phosphoglycerate dehydrogenase [Haemophilus parasuis 29755]
Length = 410
Score = 67.0 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + + + +NIA +L + + +
Sbjct: 326 VNFPEVSLPEHKGTKRLLHIHENRPGILNQLNKVFVDANVNIAAEYLQTDPTIGYV--VI 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ L+ L +
Sbjct: 384 DVETEQTGEALKCLKEIDGTIRARVL 409
>gi|227508356|ref|ZP_03938405.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227192174|gb|EEI72241.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 388
Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 34/96 (35%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + + I +++ +I +V + L GINI + +
Sbjct: 295 GNIQNSVNLPNLQVPFQ-APYRITLIHKNIPNMVGQIATALANAGINIESM--SNAARKD 351
Query: 64 HAISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
A + + +D N +++ LS + V+ +
Sbjct: 352 VAYTMIDLDNLKNEEDNKLIDTLSKIDAVFRVRVLK 387
>gi|190409979|ref|YP_001965503.1| putative D-3-phosphoglycerate dehydrogenase [Sinorhizobium
meliloti]
gi|125631009|gb|ABN47010.1| putative D-3-phosphoglycerate dehydrogenase [Sinorhizobium meliloti
SM11]
Length = 412
Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 27/86 (31%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + G+++ + I G+NI L T + +
Sbjct: 326 VNFPQVQLPERPNGTRFIHVHENRPGMLIQLNEIFSSRGLNIVAEFLQTHGDTGYVVVEA 385
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L+ L +
Sbjct: 386 EGISANADEILQSLRKIPGTIRTRLV 411
>gi|56479357|ref|YP_160946.1| D-3-phosphoglycerate dehydrogenase [Aromatoleum aromaticum EbN1]
gi|56315400|emb|CAI10045.1| D-3-phosphoglycerate dehydrogenase [Aromatoleum aromaticum EbN1]
Length = 409
Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G+ + ++ ++ G++ + + + G+NI +L +Q + +
Sbjct: 325 VNFPEVSLPAHEGQCRVMHIHHNVPGMLARINERISKAGLNIVAQYLQTTQHVGYV--VI 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D ++L+ +
Sbjct: 383 DVDAEARQVAFDELNAIDGTIRCRLI 408
>gi|319951629|ref|YP_004162896.1| d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein
[Cellulophaga algicola DSM 14237]
gi|319420289|gb|ADV47398.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Cellulophaga algicola DSM 14237]
Length = 630
Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I ++ ++ G++ V +L Y +NI +L + IS
Sbjct: 546 VNFPNIRLPKQNKAHRFLHIHKNVPGVMAKVNEVLARYELNITGQYLSTDNEVGYVIS-- 603
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ V+++L +
Sbjct: 604 DVNKEYNKDVIKELKKIENTIKFRVL 629
>gi|229828500|ref|ZP_04454569.1| hypothetical protein GCWU000342_00562 [Shuttleworthia satelles DSM
14600]
gi|229793094|gb|EEP29208.1| hypothetical protein GCWU000342_00562 [Shuttleworthia satelles DSM
14600]
Length = 387
Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 9/94 (9%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + +++ + G + + +I+G+ +N+A
Sbjct: 296 NGNIINSVNFPRCDMGECSAESRLAVLHKNSKGTLAAITSIVGDADVNVADMT--NKSRD 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+A + + +D ++ ++ K+ ++ V+ +
Sbjct: 354 VYAYTLMDLDSALPKDLVAKIDALESVIKVRVVK 387
>gi|225388719|ref|ZP_03758443.1| hypothetical protein CLOSTASPAR_02455 [Clostridium asparagiforme
DSM 15981]
gi|225045231|gb|EEG55477.1| hypothetical protein CLOSTASPAR_02455 [Clostridium asparagiforme
DSM 15981]
Length = 387
Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + V + +++ +I ++ + IL E G+NI+ ++A + L
Sbjct: 303 VNYPNCDMGVCQAASRVAVLHMNIPNMIGQITGILAEQGVNISDMT--NKSRDKYAYTLL 360
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + L+KL+ + V+
Sbjct: 361 DLENVLEPITLQKLNAIKGVLRVRVVR 387
>gi|315656840|ref|ZP_07909727.1| D-3-phosphoglycerate dehydrogenase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492795|gb|EFU82399.1| D-3-phosphoglycerate dehydrogenase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 431
Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIG-RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
S + + ++ + + I +++ ++ G++ + + + G+NI LG +
Sbjct: 326 SGETVMSVNMPNLSLEPTDNTKYRITLIHKNVPGVMAKINQLFSDAGVNIEGQVLGTNGE 385
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ I I + + L++++ + V+
Sbjct: 386 VGYVIG--DISSEMPKAALDEIAKFDSTLSVRCI 417
>gi|325106262|ref|YP_004275916.1| HAD-superfamily hydrolase, subfamily IB (PSPase-like) [Pedobacter
saltans DSM 12145]
gi|324975110|gb|ADY54094.1| HAD-superfamily hydrolase, subfamily IB (PSPase-like) [Pedobacter
saltans DSM 12145]
Length = 431
Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 32/92 (34%), Gaps = 2/92 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + G + ++ ++ G++ + + ++ INI L +
Sbjct: 341 GTTYKSSNFPNLQLPKMDGAHRLIHIHKNVPGVMSEITKVFAKHHINIVSQFLMTTSRIG 400
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ I+ I+ SV+++L +
Sbjct: 401 YVIT--DINTQYDKSVIKELKAVENTIKFRIL 430
>gi|304439491|ref|ZP_07399400.1| L-serine ammonia-lyase beta subunit [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304372087|gb|EFM25684.1| L-serine ammonia-lyase beta subunit [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 221
Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 29/94 (30%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + I I + I + + G+V V L + NI + + + T
Sbjct: 127 GGGAIVIVDINGIEVEFRGEFPTILLKYHEQKGVVANVSKFLADASYNIESINTNKDRIT 186
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ ID + + +++ E
Sbjct: 187 NLVTLTVEIDRPLEEKLKDEILNQDRFLESTYVE 220
>gi|161506671|ref|YP_001576621.1| phosphoglycerate dehydrogenase [Lactobacillus helveticus DPC 4571]
gi|160347660|gb|ABX26334.1| phosphoglycerate dehydrogenase [Lactobacillus helveticus DPC 4571]
Length = 388
Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 34/96 (35%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + + I +++ +I +V + L GINI + +
Sbjct: 295 GNIQNSVNLPNLQVPFQ-APYRITLIHKNIPNMVGQIATALANAGINIKSM--SNAARKD 351
Query: 64 HAISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
A + + +D N ++EKL + V+ +
Sbjct: 352 IAYTMIDLDNLKNEEDNKLIEKLGKIDAVFRVRVLK 387
>gi|227511356|ref|ZP_03941405.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus buchneri ATCC
11577]
gi|227523561|ref|ZP_03953610.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus hilgardii ATCC
8290]
gi|227085406|gb|EEI20718.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus buchneri ATCC
11577]
gi|227089326|gb|EEI24638.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus hilgardii ATCC
8290]
Length = 388
Score = 67.0 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 34/96 (35%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + + I +++ +I +V + L GINI + +
Sbjct: 295 GNIQNSVNLPNLQVPFQ-APYRITLIHKNIPNMVGQIATALANAGINIESM--SNAARKD 351
Query: 64 HAISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
A + + +D N +++ LS + V+ +
Sbjct: 352 VAYTMIDLDNLKNEEDNKLIDTLSKIDAVFRVRVLK 387
>gi|254490086|ref|ZP_05103279.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain,
putative [Methylophaga thiooxidans DMS010]
gi|224464750|gb|EEF81006.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain,
putative [Methylophaga thiooxydans DMS010]
Length = 409
Score = 67.0 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 25/86 (29%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI I ++ + G++ V + ++ INI + L
Sbjct: 325 VNFPEIAMQQQPDTHRILHIHHNQPGVLSHVNQLFAKHNINIVAQSMMTRDEIG--YLIL 382
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ E L ++
Sbjct: 383 DVNQLDTKLAFENLHSVEGTIRLRVL 408
>gi|312129978|ref|YP_003997318.1| d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein
[Leadbetterella byssophila DSM 17132]
gi|311906524|gb|ADQ16965.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Leadbetterella byssophila DSM 17132]
Length = 636
Score = 67.0 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ + + ++ ++ GI+ + NI ++ INI +L S + +
Sbjct: 552 VNFPELSLPLLHDSHRLLHIHKNVPGILAKLNNIFAKHHINIRGQYLKTSAEIGYV--IV 609
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I+ S ++ L +
Sbjct: 610 DIEKSYSREFVQDLKSIEETIRFRML 635
>gi|253988633|ref|YP_003039989.1| D-3-phosphoglycerate dehydrogenase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211638043|emb|CAR66671.1| d-3-phosphoglycerate dehydrogenase (ec 1.1.1.95) [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253780083|emb|CAQ83244.1| d-3-phosphoglycerate dehydrogenase [Photorhabdus asymbiotica]
Length = 413
Score = 67.0 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ ++ + GI+ + + E INIA +L S + +
Sbjct: 325 VNFPEVSLPAHADDTNRFLHIHENRPGILNSINQVFAEQDINIAAQYLRTSGDMGYVVID 384
Query: 69 LCIDGSILNS-VLEKLSVNVTIRFVKQF 95
+ + V +KL +
Sbjct: 385 IVTETPAQAEMVFQKLKALPGTIRSRLL 412
>gi|270283999|ref|ZP_05965393.2| D-3-phosphoglycerate dehydrogenase [Bifidobacterium gallicum DSM
20093]
gi|270277907|gb|EFA23761.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium gallicum DSM
20093]
Length = 401
Score = 67.0 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + + +I +C ++ + GI+ V LGE +NI LG
Sbjct: 307 FRGSTMLSVNLPQITVGACKSAARLCHLHQNFPGILAKVNQYLGEQDLNITAQSLGTEGE 366
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+A + + G + L+ L ++ FE
Sbjct: 367 IGYA--IVDVSGKPSRNTLDALEAIPGTIRLRVFE 399
>gi|227486003|ref|ZP_03916319.1| L-serine ammonia-lyase [Anaerococcus lactolyticus ATCC 51172]
gi|227236048|gb|EEI86063.1| L-serine ammonia-lyase [Anaerococcus lactolyticus ATCC 51172]
Length = 236
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G K+ + + + + + G++ V +L EYG NI +
Sbjct: 145 GGGAIVITKVNGNAIEYYANKPTLFMAYGEQKGVIAHVSGVLFEYGYNIHMMK--TIKDG 202
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
++ + +D + VLEK+ F+K
Sbjct: 203 DNVMLVCELDEPLKEGVLEKIREGKEFTFLKYI 235
>gi|54026192|ref|YP_120434.1| D-3-phosphoglycerate dehydrogenase [Nocardia farcinica IFM 10152]
gi|54017700|dbj|BAD59070.1| putative D-3-phosphoglycerate dehydrogenase [Nocardia farcinica IFM
10152]
Length = 532
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 36/100 (36%), Gaps = 15/100 (15%)
Query: 1 VFSDGK--------------PRFIKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILG 45
VF DG+ + + I N+D+ + + D G + +G LG
Sbjct: 420 VFGDGRTLNVAGTLTEPQQVQKIVNINGRNYDMRAEGLNLAVLNYDDRPGALGKIGTRLG 479
Query: 46 EYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
E I+I L + E A L ++ + V ++
Sbjct: 480 EADIDILAAQLSQDIDKEGATVILRVNKPVPADVQTAIAE 519
>gi|149188791|ref|ZP_01867082.1| Spermidine/putrescine ABC transporter ATP-binding subunit [Vibrio
shilonii AK1]
gi|148837452|gb|EDL54398.1| Spermidine/putrescine ABC transporter ATP-binding subunit [Vibrio
shilonii AK1]
Length = 389
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I + I N ++ ++ V ++L + IN+ E A + L
Sbjct: 307 VNFPTIRLE-RAEGYRITFANDNVPRVLGSVLSLLADLNINVLDML--NKSREEVAYTIL 363
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I+ + +L +S + V+
Sbjct: 364 DIEQEPNDELLSAISNVEHVFNVRTL 389
>gi|257790720|ref|YP_003181326.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Eggerthella lenta DSM 2243]
gi|257474617|gb|ACV54937.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Eggerthella lenta DSM 2243]
Length = 391
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 39/98 (39%), Gaps = 6/98 (6%)
Query: 3 SDGKPRFIKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+ + + + +++A++ + + N+ G+ G+NI +
Sbjct: 296 NGNIANSVNYPACDMGPVPDGLRRVAVLHANVPNAIARITNVFGDAGVNIENMM--NKAR 353
Query: 62 TEHAISFLCIDGSI---LNSVLEKLSVNVTIRFVKQFE 96
E+A + L +D + +E+LS +R V+ +
Sbjct: 354 GENAYTMLDLDAGTPGHPDDAIERLSAIEGVRRVRVVK 391
>gi|295397862|ref|ZP_06807925.1| D-isomer specific 2-hydroxyacid dehydrogenase [Aerococcus viridans
ATCC 11563]
gi|294973907|gb|EFG49671.1| D-isomer specific 2-hydroxyacid dehydrogenase [Aerococcus viridans
ATCC 11563]
Length = 418
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + + + I I+N +I ++ + + E G+NIA+ +
Sbjct: 317 GDIVNSVNFPSVQMSFN-SPVRITIINRNIPNMIGKISTFVAEQGMNIANMV--NRGRGD 373
Query: 64 HAISFLC---IDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + +D + ++ KL I V+ E
Sbjct: 374 FAYTLVDLEELDHEKVERLVAKLEEIPDIVRVRAIE 409
>gi|315655239|ref|ZP_07908140.1| D-3-phosphoglycerate dehydrogenase [Mobiluncus curtisii ATCC 51333]
gi|315490494|gb|EFU80118.1| D-3-phosphoglycerate dehydrogenase [Mobiluncus curtisii ATCC 51333]
Length = 413
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIG-RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
S + + ++ + + I +++ ++ G++ + + + G+NI LG +
Sbjct: 308 SGETVMSVNMPNLSLEPTDNTKYRITLIHKNVPGVMAKINQLFSDAGVNIEGQVLGTNGE 367
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ I I + + L++++ + V+
Sbjct: 368 VGYVIG--DISSEMPKAALDEIAKFDSTLSVRCI 399
>gi|315650407|ref|ZP_07903478.1| D-isomer specific 2-hydroxyacid dehydrogenase [Eubacterium
saburreum DSM 3986]
gi|315487334|gb|EFU77645.1| D-isomer specific 2-hydroxyacid dehydrogenase [Eubacterium
saburreum DSM 3986]
Length = 387
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + V + I++ +I ++ + + + G NI+ L A + +
Sbjct: 303 VNFPSCDMGVCQSEGRVAILHKNIPNMIGQITSAFAKNGYNISD--LTNKSKGTKAYTLI 360
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
I+ + ++++L+ + V+ +
Sbjct: 361 DIESKASDKLVDELNSIDGVLKVRVIK 387
>gi|298346694|ref|YP_003719381.1| phosphoglycerate dehydrogenase [Mobiluncus curtisii ATCC 43063]
gi|304389597|ref|ZP_07371559.1| D-3-phosphoglycerate dehydrogenase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|298236755|gb|ADI67887.1| phosphoglycerate dehydrogenase [Mobiluncus curtisii ATCC 43063]
gi|304327150|gb|EFL94386.1| D-3-phosphoglycerate dehydrogenase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 413
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIG-RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
S + + ++ + + I +++ ++ G++ + + + G+NI LG +
Sbjct: 308 SGETVMSVNMPNLSLEPTDNTKYRITLIHKNVPGVMAKINQLFSDAGVNIEGQVLGTNGE 367
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ I I + + L++++ + V+
Sbjct: 368 VGYVIG--DISSEMPKAALDEIAKFDSTLSVRCI 399
>gi|229817308|ref|ZP_04447590.1| hypothetical protein BIFANG_02569 [Bifidobacterium angulatum DSM
20098]
gi|229785097|gb|EEP21211.1| hypothetical protein BIFANG_02569 [Bifidobacterium angulatum DSM
20098]
Length = 399
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + +IN + G I +++++ G++ V ++LGE INIA LG E
Sbjct: 315 VNMPQINLSENRGVARIAHLHSNLPGVLARVNHVLGEENINIAAQALGT--EGELGYVVT 372
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ LE L ++
Sbjct: 373 DVAQRPNRETLEALRSIEGTIRMRVIS 399
>gi|291523659|emb|CBK81952.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Coprococcus catus GD/7]
Length = 386
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I I + +I ++ + GINI + A + + I + +++EKL+
Sbjct: 317 RITICHKNIPNMLGQLTGACAAEGINIEDMT--NKSKGDWAYTMMDIGSEVSEALVEKLA 374
Query: 85 VNVTIRFVKQFE 96
+ V++ +
Sbjct: 375 AINGVVKVRKVK 386
>gi|303252456|ref|ZP_07338620.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248491|ref|ZP_07530509.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302648657|gb|EFL78849.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306854967|gb|EFM87152.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 409
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Query: 10 IKIQEINFDV-DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + GI+ + + + +NIA +L + + +
Sbjct: 324 VNFPEVSLPILHSDAKRLLHIHENRPGILNKINQVFVDGNVNIAGQYLQTDPNIGYVVID 383
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ +D + + LE+L +
Sbjct: 384 VELDDA--SEALERLQQIDGTIKARVIS 409
>gi|165976877|ref|YP_001652470.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165876978|gb|ABY70026.1| phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 409
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Query: 10 IKIQEINFDV-DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + GI+ + + + +NIA +L + + +
Sbjct: 324 VNFPEVSLPILHSDAKRLLHIHENRPGILNKINQVFVDGNVNIAGQYLQTDPNIGYVVID 383
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ +D + + LE+L +
Sbjct: 384 VELDDA--SEALERLQQIDGTIKARVIS 409
>gi|145640438|ref|ZP_01796022.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae R3021]
gi|145275024|gb|EDK14886.1| D-3-phosphoglycerate dehydrogenase [Haemophilus influenzae 22.4-21]
Length = 286
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ G + ++ + GI+ + I E +NIA +L + + +
Sbjct: 202 VNFPEVSLPEHEGTKRLLHIHENRPGILNKLNQIFVEANLNIAAQYLQTDLKIGYVVVDV 261
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 262 ETNDASP--LLTKLKEIDGTIRARVL 285
>gi|329847730|ref|ZP_08262758.1| D-3-phosphoglycerate dehydrogenase [Asticcacaulis biprosthecum C19]
gi|328842793|gb|EGF92362.1| D-3-phosphoglycerate dehydrogenase [Asticcacaulis biprosthecum C19]
Length = 645
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + GR ++ ++ G++ + ++ +Y +N+ HL ++S + +
Sbjct: 561 VNMPHVQLSDVEGRHRFLHLHQNVPGVLAAINAVMAKYNLNVVAQHLKTTESLGYV--IV 618
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D LE+L +
Sbjct: 619 DVDNGYPKEALEELKQVHGTLKFRSLT 645
>gi|46143684|ref|ZP_00204551.1| COG0111: Phosphoglycerate dehydrogenase and related dehydrogenases
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208916|ref|YP_001054141.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
L20]
gi|190150726|ref|YP_001969251.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303250952|ref|ZP_07337141.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307246364|ref|ZP_07528440.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307250722|ref|ZP_07532656.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307253099|ref|ZP_07534980.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307255350|ref|ZP_07537160.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259800|ref|ZP_07541518.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307264127|ref|ZP_07545721.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|126097708|gb|ABN74536.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189915857|gb|ACE62109.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302650169|gb|EFL80336.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306852697|gb|EFM84926.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306857226|gb|EFM89348.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306859393|gb|EFM91425.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306861659|gb|EFM93643.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866098|gb|EFM97968.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306870501|gb|EFN02251.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 409
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Query: 10 IKIQEINFDV-DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + GI+ + + + +NIA +L + + +
Sbjct: 324 VNFPEVSLPILHSDAKRLLHIHENRPGILNKINQVFVDGNVNIAGQYLQTDPNIGYVVID 383
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ +D + + LE+L +
Sbjct: 384 VELDDA--SEALERLQQIDGTIKARVIS 409
>gi|315285499|ref|ZP_07872163.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria ivanovii FSL F6-596]
gi|313630914|gb|EFR98599.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria ivanovii FSL F6-596]
Length = 212
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Query: 11 KIQEINFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ N ++ I I + +I +V + LG+Y +NI E+A + +
Sbjct: 119 SVNYPNVEMPYNGHPRIGICHQNIPNMVGQITTELGKYSLNILDMT--NRSKNEYAYTLI 176
Query: 70 CIDGSILNSVLEKLS----VNVTIRFVKQFE 96
ID + LE+L + V+ E
Sbjct: 177 DIDKE-TQANLEQLKRDLLAVQGVLRVRVIE 206
>gi|254786723|ref|YP_003074152.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic
domain-containing protein [Teredinibacter turnerae
T7901]
gi|237684643|gb|ACR11907.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
protein [Teredinibacter turnerae T7901]
Length = 393
Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E + + I N ++ G++ V ++ E +N+ + A + L
Sbjct: 307 VNFPETSMGGLVSGCRITFTNQNVSGVLGNVLSVFAENNVNVIDMM--NKSRNDVAYNIL 364
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID ++VL L + ++
Sbjct: 365 DIDTCPSDAVLAALKSVEHVISLRVI 390
>gi|307257519|ref|ZP_07539283.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306863955|gb|EFM95874.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 409
Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Query: 10 IKIQEINFDV-DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + GI+ + + + +NIA +L + + +
Sbjct: 324 VNFPEVSLPILHSDAKRLLHIHENRPGILNKINQVFVDGNVNIAGQYLQTDPNIGYVVID 383
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ +D + + LE+L +
Sbjct: 384 VELDDA--SEALERLQQIDGTIKARVIS 409
>gi|328543022|ref|YP_004303131.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain,
putative [Polymorphum gilvum SL003B-26A1]
gi|326412768|gb|ADZ69831.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain,
putative [Polymorphum gilvum SL003B-26A1]
Length = 414
Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ ++ G + + ++ + +NI ++ + + L
Sbjct: 326 VNFPQVQLPKGTDATRFIQVHRNVPGAMRTLNDLFARHNLNIHAQYMQTIEDIGYV--VL 383
Query: 70 CIDGSILN--SVLEKLSVNVTIRFVKQFE 96
+DG + N +LE++ +
Sbjct: 384 DVDGQVPNGVDILEEIRALPNTIRARLLN 412
>gi|226328279|ref|ZP_03803797.1| hypothetical protein PROPEN_02173 [Proteus penneri ATCC 35198]
gi|225203012|gb|EEG85366.1| hypothetical protein PROPEN_02173 [Proteus penneri ATCC 35198]
Length = 416
Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 31/88 (35%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + G++ + + E IN+A +L S + + +
Sbjct: 328 VNFPEVSLPSHGDDVNRLLHIHENRPGMMNSINKVFTEENINVAAQYLRTSGNVGYVVID 387
Query: 69 LCIDGSILNS-VLEKLSVNVTIRFVKQF 95
+ VL+KL +
Sbjct: 388 ITTQTKAQAELVLQKLKELPGTIRARML 415
>gi|307261931|ref|ZP_07543589.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306868342|gb|EFN00161.1| D-3-phosphoglycerate dehydrogenase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 409
Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Query: 10 IKIQEINFDV-DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + GI+ + + + +NIA +L + + +
Sbjct: 324 VNFPEVSLPILHSDAKRLLHIHENRPGILNKINQVFVDGNVNIAGQYLQTDPNIGYVVID 383
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ +D + + LE+L +
Sbjct: 384 VELDDA--SEALERLQQIDGTIKARVIS 409
>gi|306822419|ref|ZP_07455797.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium dentium ATCC
27679]
gi|309802465|ref|ZP_07696571.1| phosphoglycerate dehydrogenase [Bifidobacterium dentium JCVIHMP022]
gi|304553964|gb|EFM41873.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium dentium ATCC
27679]
gi|308220865|gb|EFO77171.1| phosphoglycerate dehydrogenase [Bifidobacterium dentium JCVIHMP022]
Length = 399
Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + + +I I ++A++ G++ V +LGE INIA LG
Sbjct: 307 FKGSTMLSVNMPQITLSDIRSTCRIAHLHANLPGVLAHVNRVLGEDNINIAAQSLGT--E 364
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E + + L+ L+ ++
Sbjct: 365 GELGYVVTDVAQRPDQNALDALAAIEGTIRMRVIS 399
>gi|284008410|emb|CBA74846.1| D-3-phosphoglycerate dehydrogenase [Arsenophonus nasoniae]
Length = 413
Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 6/90 (6%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + G++ + + E INIA +L
Sbjct: 325 VNFPEVSLPIHTEETNRLLHIHENRPGMLNRINQLFMEDEINIAAQYL--QTKGNIGYVV 382
Query: 69 LCIDGSI---LNSVLEKLSVNVTIRFVKQF 95
+ I S+L+KL +
Sbjct: 383 IDITSQPEKTAKSLLQKLKSLPGTIRTRLL 412
>gi|291457553|ref|ZP_06596943.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium breve DSM
20213]
gi|291380606|gb|EFE88124.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium breve DSM
20213]
Length = 399
Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + +IN G I ++ ++ G++ V +LGE INI+ L E
Sbjct: 315 VNLPQINLTDCKGVCRIAHLHDNLPGVLARVNRVLGEENINISFQSLAT--EGELGYVVT 372
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + LE L ++
Sbjct: 373 DVAQKPSPATLEALRSIEGTIRMRVI 398
>gi|171742506|ref|ZP_02918313.1| hypothetical protein BIFDEN_01618 [Bifidobacterium dentium ATCC
27678]
gi|171278120|gb|EDT45781.1| hypothetical protein BIFDEN_01618 [Bifidobacterium dentium ATCC
27678]
Length = 399
Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + + +I I ++A++ G++ V +LGE INIA LG
Sbjct: 307 FKGSTMLSVNMPQITLSDIRSTCRIAHLHANLPGVLAHVNRVLGEDNINIAAQSLGT--E 364
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E + + L+ L+ ++
Sbjct: 365 GELGYVVTDVAQRPDQNALDALAAIEGTIRMRVIS 399
>gi|268611575|ref|ZP_06145302.1| D-3-phosphoglycerate dehydrogenase [Ruminococcus flavefaciens FD-1]
Length = 386
Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + + ICI++ ++ + + +G GINI + + + A + L
Sbjct: 304 VNLPNASMNAV--GTKICIIHKNVPTTIASITTAVGNEGINIENMV--NASKKDFAYTML 359
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ G + +V K++ + V+
Sbjct: 360 DVTGDVPPTVEGKINAVDGVIRVRVI 385
>gi|323144608|ref|ZP_08079196.1| phosphoglycerate dehydrogenase [Succinatimonas hippei YIT 12066]
gi|322415617|gb|EFY06363.1| phosphoglycerate dehydrogenase [Succinatimonas hippei YIT 12066]
Length = 411
Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 28/87 (32%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + V+ ++ G++ + + IN+A +L + +
Sbjct: 326 VNFPEVSLPAKREGVSRLLHVHKNVPGVMRQINEVFASKDINVAAQYLQTT--GDVGYVV 383
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ I ++ L +
Sbjct: 384 MDIHSETPEEIVPLLKQIPATLKCRIL 410
>gi|269468603|gb|EEZ80247.1| phosphoglycerate dehydrogenase [uncultured SUP05 cluster bacterium]
Length = 385
Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 31/93 (33%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + E + I + +I +V + + + G NI
Sbjct: 296 NGNILNSVNFPEAKMPRAGKE-RLAITHKNIPNMVGQISTAVADAGANIVDML--NKSRD 352
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + + ++ I ++V+ L I V+
Sbjct: 353 DVAYTLIDLESEISDTVISNLKQIEGILTVRGL 385
>gi|37527473|ref|NP_930817.1| D-3-phosphoglycerate dehydrogenase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786908|emb|CAE15978.1| D-3-phosphoglycerate dehydrogenase (PGDH) [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 413
Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ V ++ + GI+ + + E INIA +L S + +
Sbjct: 325 VNFPEVSLPVHADDTNRFLHIHENRPGILNSINQVFAEQDINIAAQYLRTSGDMGYVVID 384
Query: 69 LCIDGSILNS-VLEKLSVNVTIRFVKQF 95
+ + V +KL +
Sbjct: 385 IVTENPAQAEMVFQKLKALPGTIRSRLL 412
>gi|257065615|ref|YP_003151871.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Anaerococcus prevotii DSM 20548]
gi|256797495|gb|ACV28150.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Anaerococcus prevotii DSM 20548]
Length = 220
Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G K+ + + + + A+ G++ FV IL + G NI +
Sbjct: 128 GGGAIVITKMNGNAIEFKANKPTLFMSYAEQKGVIAFVSGILFDNGYNINTMK--TIKED 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +D + +L+K+ F+K
Sbjct: 186 NNVMLVCELDEPLREDILQKIRDGKDFTFIKYI 218
>gi|313635536|gb|EFS01759.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria seeligeri FSL N1-067]
Length = 432
Score = 66.2 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Query: 11 KIQEINFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ N ++ I I + +I +V + LG+Y +NI E+A + +
Sbjct: 302 SVNYPNVEMPYNGHPRIGICHQNIPNMVGQITTELGKYSLNILDMT--NRSKNEYAYTLI 359
Query: 70 CIDGSILNSVLEKLS----VNVTIRFVKQFE 96
ID + LE+L + V+ E
Sbjct: 360 DIDKE-TQANLEQLKRDLLAVQGVLRVRVIE 389
>gi|313904145|ref|ZP_07837524.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Eubacterium cellulosolvens 6]
gi|313470947|gb|EFR66270.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Eubacterium cellulosolvens 6]
Length = 387
Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I I + ++ ++ G+IL + G+NIA+ ++A + + ++ + + ++ ++
Sbjct: 318 RITICHKNVKDMIRQFGSILSDEGMNIANM--ANKSRGDYAYTVIDLETPVNDKIMTRIE 375
Query: 85 VNVTIRFVKQFE 96
+ + +
Sbjct: 376 SVEGVLRARIIK 387
>gi|283456407|ref|YP_003360971.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium dentium Bd1]
gi|283103041|gb|ADB10147.1| serA1 D-3-phosphoglycerate dehydrogenase [Bifidobacterium dentium
Bd1]
Length = 356
Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F + + +I I ++A++ G++ V +LGE INIA LG
Sbjct: 264 FKGSTMLSVNMPQITLSDIRSTCRIAHLHANLPGVLAHVNRVLGEDNINIAAQSLGT--E 321
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E + + L+ L+ ++
Sbjct: 322 GELGYVVTDVAQRPDQNALDALAAIEGTIRMRVIS 356
>gi|296129418|ref|YP_003636668.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Cellulomonas flavigena DSM 20109]
gi|296021233|gb|ADG74469.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Cellulomonas flavigena DSM 20109]
Length = 399
Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + D + ++ ++ G++ V L ++G+NI L E
Sbjct: 315 VNLPNLALDQRPDAHRVAYLHRNVPGVLATVNATLADHGVNIEGQLLAT--RGELGYVVT 372
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + V++ LS ++
Sbjct: 373 DVSAPVADDVVDVLSGRPESLRLRLL 398
>gi|259502991|ref|ZP_05745893.1| D-isomer specific 2-hydroxyacid dehydrogenase [Lactobacillus antri
DSM 16041]
gi|259169056|gb|EEW53551.1| D-isomer specific 2-hydroxyacid dehydrogenase [Lactobacillus antri
DSM 16041]
Length = 376
Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 35/96 (36%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + + + I++ +I ++ + + G+NI + L +
Sbjct: 283 GNTVNSVNLPNVQAPFAG-PYRLTIIHRNIPNMLGQITTAIAGAGLNIEN--LLNRARGD 339
Query: 64 HAISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
A + + ++ +I +VL L + V+ E
Sbjct: 340 FAYTIVDVNQMTPAIERAVLAALDKIPAVSRVRLIE 375
>gi|255530177|ref|YP_003090549.1| HAD-superfamily hydrolase [Pedobacter heparinus DSM 2366]
gi|255343161|gb|ACU02487.1| HAD-superfamily hydrolase, subfamily IB (PSPase-like) [Pedobacter
heparinus DSM 2366]
Length = 432
Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 28/85 (32%), Gaps = 2/85 (2%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+ + ++ ++ GI+ V I ++ INI L + S + I+
Sbjct: 349 NFPNLQLPRIDKSHRLIHIHKNVPGIMAKVNTIFAKHDINIVGQFLMTNPSIGYVIT--D 406
Query: 71 IDGSILNSVLEKLSVNVTIRFVKQF 95
I+ + + L +
Sbjct: 407 INAQYDKQLFKSLKKIEHTIKFRVL 431
>gi|83590779|ref|YP_430788.1| L-serine ammonia-lyase [Moorella thermoacetica ATCC 39073]
gi|83573693|gb|ABC20245.1| L-serine ammonia-lyase [Moorella thermoacetica ATCC 39073]
Length = 218
Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 35/93 (37%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ KI ++ + D G++ V +L G+NIA + R ++
Sbjct: 123 GGAQVVVNKIDAFEVEIYGDLPTLVAAYPDRPGVIAAVAALLAGVGVNIAGMRVSRREAG 182
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E A+ + D +I ++ + + V Q
Sbjct: 183 EQALMVVETDQAIPPGLVPAMRALPMMERVIQI 215
>gi|317496716|ref|ZP_07955046.1| D-isomer specific 2-hydroxyacid dehydrogenase [Lachnospiraceae
bacterium 5_1_63FAA]
gi|291559299|emb|CBL38099.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[butyrate-producing bacterium SSC/2]
gi|316895728|gb|EFV17880.1| D-isomer specific 2-hydroxyacid dehydrogenase [Lachnospiraceae
bacterium 5_1_63FAA]
Length = 387
Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 32/94 (34%), Gaps = 3/94 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + G I + + ++ ++ + IL G NI++
Sbjct: 296 NGNIVNSVNYPNCDLGEASGAARITVHHKNLPNMIGQLTAILAADGHNISNML--NKSKG 353
Query: 63 EHAISFLCID-GSILNSVLEKLSVNVTIRFVKQF 95
E A S ++ + ++K+ + V+
Sbjct: 354 EWAYSMFDMEKKAPTEETIKKMEQIDGVVRVRVL 387
>gi|313123688|ref|YP_004033947.1| d-isomer specific 2-hydroxyacid dehydrogenase [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312280251|gb|ADQ60970.1| D-isomer specific 2-hydroxyacid dehydrogenase [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 391
Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + ++ + I +++ +I ++ + L GINI + L +
Sbjct: 296 GNIINSVNLPNVSAPFE-SDHRITLIHKNIPNMIGQISTYLAGRGINIEN--LVNKAKDK 352
Query: 64 HAISFLC---IDGSILNSVLEKLSVNVTIRFVKQFE 96
+A + + ID + + V+ L + V+
Sbjct: 353 YAYTMIDIDEIDQATQDEVVLNLEQIPAVTRVRILT 388
>gi|167767385|ref|ZP_02439438.1| hypothetical protein CLOSS21_01904 [Clostridium sp. SS2/1]
gi|167711360|gb|EDS21939.1| hypothetical protein CLOSS21_01904 [Clostridium sp. SS2/1]
Length = 387
Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 32/94 (34%), Gaps = 3/94 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + G I + + ++ ++ + IL G NI++
Sbjct: 296 NGNIVNSVNYPNCDLGEASGAARITVHHKNLPNMIGQLTAILAADGHNISNML--NKSKG 353
Query: 63 EHAISFLCID-GSILNSVLEKLSVNVTIRFVKQF 95
E A S ++ + ++K+ + V+
Sbjct: 354 EWAYSMFDMEKKAPTEETIKKMEQIDGVVRVRVL 387
>gi|319787403|ref|YP_004146878.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Pseudoxanthomonas suwonensis 11-1]
gi|317465915|gb|ADV27647.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Pseudoxanthomonas suwonensis 11-1]
Length = 413
Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 32/86 (37%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G L + ++ ++ G++ V I + +NI L + + +
Sbjct: 327 VNFPEVTLPEHEGSLRLLHIHRNVPGVLSKVNEIFSRHAVNIDGQFLRTDPKVGYVVIDV 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D + + + E+L+ +
Sbjct: 387 AADEAKVGLLREELAAIPGTLRTRVL 412
>gi|58426360|gb|AAW75397.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 495
Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 7/86 (8%), Positives = 28/86 (32%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ + + + +NI L + + +
Sbjct: 409 VNFPEVTLPEHPDSLRLLHIHRNVPGVLSQINELFSRHNLNIDGQFLRTDPKVGYVVIDV 468
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + L+ +
Sbjct: 469 SASEELAAILKDGLAQITGTLRTRVL 494
>gi|160881506|ref|YP_001560474.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Clostridium phytofermentans ISDg]
gi|160430172|gb|ABX43735.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Clostridium phytofermentans ISDg]
Length = 386
Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 8/74 (10%), Positives = 26/74 (35%), Gaps = 2/74 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ I + + ++ + +NI + L ++A + L + + ++
Sbjct: 315 AGTRVTICHRNKPNMLAQFTTVFSSKNLNIEN--LANKSKGDYAYTVLDLCTVVTEEFVK 372
Query: 82 KLSVNVTIRFVKQF 95
+L + V+
Sbjct: 373 ELEEIEGVLKVRVI 386
>gi|312889936|ref|ZP_07749480.1| HAD-superfamily hydrolase, subfamily IB (PSPase-like)
[Mucilaginibacter paludis DSM 18603]
gi|311297468|gb|EFQ74593.1| HAD-superfamily hydrolase, subfamily IB (PSPase-like)
[Mucilaginibacter paludis DSM 18603]
Length = 430
Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 9/74 (12%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ ++ ++ GI+ + + ++ INI L + + I+ ++ +L
Sbjct: 358 NAHRLIHIHKNVPGILAQINEVFAKHNINIVGEFLVTNAQIGYVIT--DVNKGYDQQILT 415
Query: 82 KLSVNVTIRFVKQF 95
+L +
Sbjct: 416 ELKKIEHTIKFRLL 429
>gi|167462008|ref|ZP_02327097.1| L-serine dehydratase (beta chain) [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322384861|ref|ZP_08058522.1| L-serine dehydratase beta chain-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321150330|gb|EFX43832.1| L-serine dehydratase beta chain-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 234
Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLM--ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G ++ D + +++ D G V V ++L ++ INI + + RS
Sbjct: 126 GGGSMEIREV--RQLDDTPSGKTPAMLVLHEDKYGAVANVTSLLAKHHINIGYMEVSRST 183
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
++ + +D S+ +S++ + I +
Sbjct: 184 K-GQSLMAIEVDQSVDDSLIHHMYGLPHITEI 214
>gi|170747844|ref|YP_001754104.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Methylobacterium radiotolerans JCM 2831]
gi|170654366|gb|ACB23421.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Methylobacterium radiotolerans JCM 2831]
Length = 407
Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + V+ ++ G++ + I +NI +L + +
Sbjct: 317 VNFPQVQLPPRLSGARFLHVHRNVPGVLGQINAIFSGRSLNIDAQYLQTDGEFGYVVVDA 376
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ + VL L +
Sbjct: 377 SVPPGEADGVLHALRAIDGTVRTRHLR 403
>gi|261366566|ref|ZP_05979449.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Subdoligranulum variabile DSM 15176]
gi|282571384|gb|EFB76919.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Subdoligranulum variabile DSM 15176]
Length = 386
Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + +++ +G ICI++ + G + + IL +NI +
Sbjct: 297 NGNITHSVNLPDVS-QPRVGGRRICIIHKNAPGAISAITGILTAAHLNIENMV--NKSKK 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + L + G I +++ +LS V+
Sbjct: 354 DIAYTLLDVTGEISDTLAAELSGIEPAIRVRIL 386
>gi|67906575|gb|AAY82681.1| predicted D-isomer specific 2-hydroxyacid dehydrogenase family
protein [uncultured bacterium MedeBAC49C08]
Length = 395
Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I N ++ G++ + I+ E G+NI + A + + +D +E +
Sbjct: 324 YRLTIANKNVSGMIGKITAIIAEEGLNIIDMK--NRSRDDIAYNVIDLDSEPSTKSIEAI 381
Query: 84 SVNVTIRFVKQFE 96
I V+Q
Sbjct: 382 KGEENIINVRQIN 394
>gi|310287090|ref|YP_003938348.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium bifidum S17]
gi|311063955|ref|YP_003970680.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium bifidum
PRL2010]
gi|309251026|gb|ADO52774.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium bifidum S17]
gi|310866274|gb|ADP35643.1| SerA D-3-phosphoglycerate dehydrogenase [Bifidobacterium bifidum
PRL2010]
Length = 399
Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I ++A++ G++ V ++LGE INIA LG E + + L+ LS
Sbjct: 330 RIAHLHANLPGVLARVNHVLGEENINIAAQSLGT--EGELGYVVTDVSQKPSQTTLDALS 387
Query: 85 VNVTIRFVKQFE 96
++
Sbjct: 388 HIEGTIRMRVIS 399
>gi|227504457|ref|ZP_03934506.1| phosphoglycerate dehydrogenase [Corynebacterium striatum ATCC 6940]
gi|227199105|gb|EEI79153.1| phosphoglycerate dehydrogenase [Corynebacterium striatum ATCC 6940]
Length = 528
Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 37/81 (45%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG +FI+I E FD+ + D G + VG LG GINI L + ++
Sbjct: 434 DGVEKFIRINERGFDMRATGRNLFFSYDDAPGALGTVGTKLGAAGINIVAAALTQGKTPA 493
Query: 64 HAISFLCIDGSILNSVLEKLS 84
A+ L ++ + ++E +
Sbjct: 494 DAVLILRVEREVAEELVEDIK 514
>gi|295102272|emb|CBK99817.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Faecalibacterium prausnitzii L2-6]
Length = 386
Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
G ICI++ + G++ + + E G+NI + A + L G++ +++
Sbjct: 313 RAGGKRICIIHKNEPGMISQITALTTEAGLNIENMV--NKSRKNMAYTMLDATGAVNDAL 370
Query: 80 LEKLSVNVTIRFVKQF 95
KLS + V+
Sbjct: 371 AAKLSAIPAVVRVRIL 386
>gi|302335503|ref|YP_003800710.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Olsenella uli DSM 7084]
gi|301319343|gb|ADK67830.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Olsenella uli DSM 7084]
Length = 407
Score = 65.4 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + L I ++ ++ ++ + +L Y NI A + +
Sbjct: 315 VNYPDCDLGPVTSGLRIAALHDNVPNMIGQITAVLARYDANIRRM--SNEAQDGSAYTLI 372
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+DG + + + L I ++ E
Sbjct: 373 DLDGRLDDGAVADLRPIPGIYRIRVLE 399
>gi|313640158|gb|EFS04764.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria seeligeri FSL S4-171]
Length = 395
Score = 65.4 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Query: 11 KIQEINFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ N ++ I I + +I +V + LG+Y +NI E+A + +
Sbjct: 302 SVNYPNVEMPYNGHPRIGICHQNIPNMVGQITTELGKYSLNILDMT--NRSKNEYAYTLI 359
Query: 70 CIDGSILNSVLEKLS----VNVTIRFVKQFE 96
ID + LE+L + V+ E
Sbjct: 360 DIDKE-TQANLEQLKRDLLAVQGVLRVRVIE 389
>gi|313139789|ref|ZP_07801982.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium bifidum NCIMB
41171]
gi|313132299|gb|EFR49916.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium bifidum NCIMB
41171]
Length = 399
Score = 65.4 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I ++A++ G++ V ++LGE INIA LG E + + L+ LS
Sbjct: 330 RIAHLHANLPGVLARVNHVLGEENINIAAQSLGT--EGELGYVVTDVSQKPSQTTLDALS 387
Query: 85 VNVTIRFVKQFE 96
++
Sbjct: 388 HIEGTIRMRVIS 399
>gi|299820852|ref|ZP_07052741.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria grayi DSM 20601]
gi|299817873|gb|EFI85108.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria grayi DSM 20601]
Length = 395
Score = 65.4 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 7/90 (7%)
Query: 12 IQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+ N D+ I I + +I +V + L + NI S ++A + +
Sbjct: 302 VNYPNVDMPYKGLPRISICHKNIPNMVGQITTELAKNTFNIIDMR--NSSKGDYAYTLID 359
Query: 71 IDGSILN----SVLEKLSVNVTIRFVKQFE 96
+D + + +LS + V+ E
Sbjct: 360 LDEANTKADLRDIKRELSAIQGVLRVRILE 389
>gi|229077253|ref|ZP_04209947.1| L-serine dehydratase, beta chain [Bacillus cereus Rock4-18]
gi|228706084|gb|EEL58379.1| L-serine dehydratase, beta chain [Bacillus cereus Rock4-18]
Length = 219
Score = 65.4 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 34/89 (38%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G+ + I++ + I+N + + V IL INI + R ++ +
Sbjct: 127 GGRVKIIEVNGFELKLREENPAFLIMNNNHFSTISSVIAILSSCKININKVRISRKETGK 186
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+I + + ++ ++ K+ I
Sbjct: 187 LSILIIETEKPLVPELIGKIKKLSGIHQA 215
>gi|300812035|ref|ZP_07092486.1| 4-phosphoerythronate dehydrogenase [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
gi|300496984|gb|EFK32055.1| 4-phosphoerythronate dehydrogenase [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
Length = 391
Score = 65.4 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + ++ + I +++ +I ++ + L GINI + L +
Sbjct: 296 GNIINSVNLPNVSAPFE-SDHRITLIHKNIPNMIGQISTYLAGRGINIEN--LVNKAKEK 352
Query: 64 HAISFLC---IDGSILNSVLEKLSVNVTIRFVKQFE 96
+A + + ID + + V+ L + V+
Sbjct: 353 YAYTMIDIDEIDQATQDEVVLNLEQIPAVTRVRILT 388
>gi|47095631|ref|ZP_00233239.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes str. 1/2a F6854]
gi|258611415|ref|ZP_05232079.2| D-isomer specific 2-hydroxyacid dehydrogenase [Listeria
monocytogenes FSL N3-165]
gi|258612250|ref|ZP_05269157.2| D-isomer specific 2-hydroxyacid dehydrogenase [Listeria
monocytogenes F6900]
gi|293596257|ref|ZP_05229813.2| D-isomer specific 2-hydroxyacid dehydrogenase [Listeria
monocytogenes FSL J1-194]
gi|293596643|ref|ZP_05263091.2| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes J2818]
gi|47016061|gb|EAL06986.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes str. 1/2a F6854]
gi|258599770|gb|EEW13095.1| D-isomer specific 2-hydroxyacid dehydrogenase [Listeria
monocytogenes FSL N3-165]
gi|258610062|gb|EEW22670.1| D-isomer specific 2-hydroxyacid dehydrogenase [Listeria
monocytogenes F6900]
gi|293591080|gb|EFF99414.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes J2818]
gi|293594052|gb|EFG01813.1| D-isomer specific 2-hydroxyacid dehydrogenase [Listeria
monocytogenes FSL J1-194]
Length = 403
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 6/85 (7%)
Query: 16 NFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
N ++ I I + +I +V + LG+Y +NI E+A + + ID
Sbjct: 315 NVEMPYNGHPRIGICHKNIPNMVGQITTELGKYSLNILDMI--NRSKNEYAYTLIDIDKE 372
Query: 75 IL---NSVLEKLSVNVTIRFVKQFE 96
+ + L + V+ E
Sbjct: 373 TQANLEQLKQDLLAVQGVLRVRVIE 397
>gi|257867176|ref|ZP_05646829.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus EC30]
gi|257873511|ref|ZP_05653164.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus EC10]
gi|257801232|gb|EEV30162.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus EC30]
gi|257807675|gb|EEV36497.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus EC10]
Length = 394
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R + + + I+N ++ ++ + +I+ E GINI + + A +
Sbjct: 300 RSVNFPTVEMAFH-SPYRLTIINRNVPNMLGQISSIIAESGINIDNML--NRGREDFAYT 356
Query: 68 FLCI---DGSILNSVLEKLSVNVTIRFVKQFE 96
+ D ++LN + +KL NV I V+ +
Sbjct: 357 LADVASEDEALLNQLADKLRENVNIVRVRVIK 388
>gi|326798169|ref|YP_004315988.1| amino acid-binding ACT domain protein [Sphingobacterium sp. 21]
gi|326548933|gb|ADZ77318.1| amino acid-binding ACT domain protein [Sphingobacterium sp. 21]
Length = 430
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 29/92 (31%), Gaps = 2/92 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + ++ ++ GI+ + N+ ++ INI L
Sbjct: 340 GDTAMSRNFPNMQLPRIHQAHRLIHIHKNVPGIMAQINNVFAQHHINIVAQFLMT--KGN 397
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
I +++L++L T ++
Sbjct: 398 IGYVITDISKGYDDTLLKELRQITTTIKLRIL 429
>gi|224282630|ref|ZP_03645952.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium bifidum NCIMB
41171]
Length = 393
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I ++A++ G++ V ++LGE INIA LG E + + L+ LS
Sbjct: 324 RIAHLHANLPGVLARVNHVLGEENINIAAQSLGT--EGELGYVVTDVSQKPSQTTLDALS 381
Query: 85 VNVTIRFVKQFE 96
++
Sbjct: 382 HIEGTIRMRVIS 393
>gi|328867831|gb|EGG16212.1| 3-phosphoglycerate dehydrogenase [Dictyostelium fasciculatum]
Length = 984
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I+ + I ++ + G++ + IL E N++ L +
Sbjct: 902 VNFPAISMPIRPDTHRILNIHQNRPGVLRDINLILSE--FNVSAQTLSTRKQIG--YIIA 957
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + + +K+S + +
Sbjct: 958 DVDKAASKEIKKKISSIPSSIKTRVL 983
>gi|289436066|ref|YP_003465938.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289172310|emb|CBH28856.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 395
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Query: 11 KIQEINFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ N ++ I I + +I +V + LG+Y +NI E+A + +
Sbjct: 302 SVNYPNVEMPYNGHPRIGICHQNIPNMVGQITTELGKYSLNILDMT--NRSKNEYAYTLI 359
Query: 70 CIDGSILNSVLEKLS----VNVTIRFVKQFE 96
ID + LE+L + V+ E
Sbjct: 360 DIDKE-TQANLEQLKRDLLAVQGVLRVRVIE 389
>gi|28377138|ref|NP_784030.1| phosphoglycerate dehydrogenase [Lactobacillus plantarum WCFS1]
gi|254555357|ref|YP_003061774.1| phosphoglycerate dehydrogenase [Lactobacillus plantarum JDM1]
gi|300766876|ref|ZP_07076789.1| phosphoglycerate dehydrogenase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|28269969|emb|CAD62868.1| phosphoglycerate dehydrogenase [Lactobacillus plantarum WCFS1]
gi|254044284|gb|ACT61077.1| phosphoglycerate dehydrogenase [Lactobacillus plantarum JDM1]
gi|300495414|gb|EFK30569.1| phosphoglycerate dehydrogenase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 392
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 34/90 (37%), Gaps = 6/90 (6%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
I + ++N + +++ ++ +V + L +NI + + A + +
Sbjct: 301 INLPDLNVPFNAA-YRFTVIHENVPNMVSQITAKLAAANLNITTM--ANAAKHQIAYTII 357
Query: 70 CID---GSILNSVLEKLSVNVTIRFVKQFE 96
+D ++ +LS + V+ +
Sbjct: 358 DVDDLQQPQQADLIAELSKIPAVSRVRLLK 387
>gi|116874170|ref|YP_850951.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria welshimeri serovar 6b str. SLCC5334]
gi|116743048|emb|CAK22172.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria welshimeri serovar 6b str. SLCC5334]
Length = 395
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 8/90 (8%)
Query: 12 IQEINFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+ N ++ I I + +I +V + LG+Y +NI E+A + +
Sbjct: 303 VNYPNVEMPYNGHPRIGICHKNIPNMVGQITTELGKYSLNILDMT--NRSKNEYAYTLID 360
Query: 71 IDGSILNSVLEKLS----VNVTIRFVKQFE 96
ID + LE+L + V+ E
Sbjct: 361 IDKE-TQANLEQLKHDLLAVQGVLRVRVIE 389
>gi|325918208|ref|ZP_08180356.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas vesicatoria ATCC
35937]
gi|325535581|gb|EGD07429.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas vesicatoria ATCC
35937]
Length = 417
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 7/86 (8%), Positives = 28/86 (32%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ + + + +NI L + + +
Sbjct: 331 VNFPEVTLPEHPDSLRLLHIHRNVPGVLSQINELFSRHNLNIDGQFLRTDPKVGYVVIDV 390
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ++L +
Sbjct: 391 SASEELAGVLKDELGQITGTLRTRVL 416
>gi|308179355|ref|YP_003923483.1| phosphoglycerate dehydrogenase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|308044846|gb|ADN97389.1| phosphoglycerate dehydrogenase [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 392
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 34/90 (37%), Gaps = 6/90 (6%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
I + ++N + +++ ++ +V + L +NI + + A + +
Sbjct: 301 INLPDLNVPFNAA-YRFTVIHENVPNMVSQITAKLAAANLNITTM--ANAAKHQIAYTII 357
Query: 70 CID---GSILNSVLEKLSVNVTIRFVKQFE 96
+D ++ +LS + V+ +
Sbjct: 358 DVDDLQQPQQADLIAELSKIPAVSRVRLLK 387
>gi|160935004|ref|ZP_02082390.1| hypothetical protein CLOLEP_03880 [Clostridium leptum DSM 753]
gi|156866457|gb|EDO59829.1| hypothetical protein CLOLEP_03880 [Clostridium leptum DSM 753]
Length = 389
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 35/96 (36%), Gaps = 2/96 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ + ++ G +C+ + +I ++ V +L + G+NI +
Sbjct: 295 LSDGNIINSVNFPALSSPRAAGCSRVCVFHKNIPSMLSQVTKLLSDKGVNIENMQS--KS 352
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ A + L G + LE L + I ++
Sbjct: 353 RKDVAYTVLDCAGQVGQDALESLVDSEGIIRIRVIS 388
>gi|325686206|gb|EGD28253.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 391
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + ++ + I +++ +I ++ + L GINI + L +
Sbjct: 296 GDIINSVNLPNVSAPFE-SDHRITLIHKNIPNMIGQISTYLAGRGINIEN--LVNKAKDK 352
Query: 64 HAISFLC---IDGSILNSVLEKLSVNVTIRFVKQFE 96
+A + + ID + + V+ L + V+
Sbjct: 353 YAYTMIDIDEIDQATQDEVVLNLEQIPAVTRVRILT 388
>gi|16804861|ref|NP_466346.1| hypothetical protein lmo2824 [Listeria monocytogenes EGD-e]
gi|217965968|ref|YP_002351646.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes HCC23]
gi|224502762|ref|ZP_03671069.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes FSL R2-561]
gi|254830740|ref|ZP_05235395.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes 10403S]
gi|254899718|ref|ZP_05259642.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes J0161]
gi|255016658|ref|ZP_05288784.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes FSL F2-515]
gi|255029264|ref|ZP_05301215.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes LO28]
gi|255521739|ref|ZP_05388976.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes FSL J1-175]
gi|284800288|ref|YP_003412153.1| hypothetical protein LM5578_0033 [Listeria monocytogenes 08-5578]
gi|284993473|ref|YP_003415241.1| hypothetical protein LM5923_0033 [Listeria monocytogenes 08-5923]
gi|16412324|emb|CAD01037.1| lmo2824 [Listeria monocytogenes EGD-e]
gi|217335238|gb|ACK41032.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes HCC23]
gi|284055850|gb|ADB66791.1| hypothetical protein LM5578_0033 [Listeria monocytogenes 08-5578]
gi|284058940|gb|ADB69879.1| hypothetical protein LM5923_0033 [Listeria monocytogenes 08-5923]
gi|307572415|emb|CAR85594.1| D-3-phosphoglycerate dehydrogenase [Listeria monocytogenes L99]
Length = 395
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 6/85 (7%)
Query: 16 NFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
N ++ I I + +I +V + LG+Y +NI E+A + + ID
Sbjct: 307 NVEMPYNGHPRIGICHKNIPNMVGQITTELGKYSLNILDMI--NRSKNEYAYTLIDIDKE 364
Query: 75 IL---NSVLEKLSVNVTIRFVKQFE 96
+ + L + V+ E
Sbjct: 365 TQANLEQLKQDLLAVQGVLRVRVIE 389
>gi|255025114|ref|ZP_05297100.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes FSL J2-003]
Length = 395
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 6/85 (7%)
Query: 16 NFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
N ++ I I + +I +V + LG+Y +NI E+A + + ID
Sbjct: 307 NVEMPYNGHPRIGICHKNIPNMVGQITTELGKYSLNILDMI--NRSKNEYAYTLIDIDKE 364
Query: 75 IL---NSVLEKLSVNVTIRFVKQFE 96
+ + L + V+ E
Sbjct: 365 TQANLEQLKQDLLAVQGVLRVRVIE 389
>gi|255022933|ref|ZP_05294919.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes FSL J1-208]
gi|313605931|gb|EFR83114.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes FSL F2-208]
Length = 395
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 6/85 (7%)
Query: 16 NFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
N ++ I I + +I +V + LG+Y +NI E+A + + ID
Sbjct: 307 NVEMPYNGHPRIGICHKNIPNMVGQITTELGKYSLNILDMI--NRSKNEYAYTLIDIDKE 364
Query: 75 IL---NSVLEKLSVNVTIRFVKQFE 96
+ + L + V+ E
Sbjct: 365 TQANLEQLKQDLLAVQGVLRVRVIE 389
>gi|224498338|ref|ZP_03666687.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes Finland 1988]
Length = 395
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 6/85 (7%)
Query: 16 NFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
N ++ I I + +I +V + LG+Y +NI E+A + + ID
Sbjct: 307 NVEMPYNGHPRIGICHKNIPNMVGQITTELGKYSLNILDMI--NRSKNEYAYTLIDIDKE 364
Query: 75 IL---NSVLEKLSVNVTIRFVKQFE 96
+ + L + V+ E
Sbjct: 365 TQANLEQLKQDLLAVQGVLRVRVIE 389
>gi|229916352|ref|YP_002884998.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Exiguobacterium sp. AT1b]
gi|229467781|gb|ACQ69553.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Exiguobacterium sp. AT1b]
Length = 387
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 33/91 (36%), Gaps = 5/91 (5%)
Query: 5 GKPRFI-KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + R + I++ ++ +V + L +G+NI + E
Sbjct: 298 GNIRSSANFPNVELPYTGKR-RLGILHRNVPNMVGQITGELASHGLNIDNMV--NRSRGE 354
Query: 64 HAISFLCIDGSILNSV-LEKLSVNVTIRFVK 93
A + + +D S + + L + V+
Sbjct: 355 MAYTLIDLDNSEHEPLSIHALYEIQGVIRVR 385
>gi|303242238|ref|ZP_07328726.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Acetivibrio cellulolyticus CD2]
gi|302590226|gb|EFL59986.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Acetivibrio cellulolyticus CD2]
Length = 387
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + G + + + ++ + + + + Y INI +
Sbjct: 305 VNFPDSEL-ARSGDRRVIVAHDNVPNMFGQITSTIASYKINIGDMLSRHRDKIG--YTIF 361
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I+GS+ V+ +L +R V+
Sbjct: 362 DIEGSLSEEVVNRLKSISGVRMVRVI 387
>gi|257437895|ref|ZP_05613650.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Faecalibacterium prausnitzii A2-165]
gi|257199555|gb|EEU97839.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Faecalibacterium prausnitzii A2-165]
Length = 386
Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
G ICI++ + G++ + + E G+NI + A + L G++ +
Sbjct: 313 RAGGKRICIIHKNEPGMISQITALTTEAGLNIENMV--NKSKKNMAYTMLDATGAVDGRL 370
Query: 80 LEKLSVNVTIRFVKQF 95
EKL+ + V+
Sbjct: 371 AEKLAAIPAVIRVRIL 386
>gi|329113449|ref|ZP_08242230.1| D-3-phosphoglycerate dehydrogenase [Acetobacter pomorum DM001]
gi|326697274|gb|EGE48934.1| D-3-phosphoglycerate dehydrogenase [Acetobacter pomorum DM001]
Length = 419
Score = 65.1 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 8/90 (8%), Positives = 24/90 (26%), Gaps = 6/90 (6%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + ++ G+++ + I N+ L E +
Sbjct: 328 VNFPGVQLPQSPRGTRFMHAHRNVPGMMMRLNEIFMNADCNVTAQFLQTD--GEIGYVVI 385
Query: 70 CID----GSILNSVLEKLSVNVTIRFVKQF 95
D + + +L+ L +
Sbjct: 386 EADTGGSTELDDRLLQALRGLEGTIRARLI 415
>gi|298705972|emb|CBJ29093.1| D-3-phosphoglycerate dehydrogenase [Ectocarpus siliculosus]
Length = 623
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Query: 1 VFSDGKPRFIKIQEINF--DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR 58
VF + +P ++I ++ N D G+V+ V L +N+ ++GR
Sbjct: 525 VFGE-EPNLVQIDNHRSFPAFKPEGTIVMFRNEDRAGVVLQVLQELEAAEVNVGRLNVGR 583
Query: 59 SQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ E A++ + IDG I V+ KL +R V
Sbjct: 584 QE-GELALTIMGIDGEITPDVMSKLGALSAVREVSVANL 621
>gi|300112892|ref|YP_003759467.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Nitrosococcus watsonii C-113]
gi|299538829|gb|ADJ27146.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Nitrosococcus watsonii C-113]
Length = 387
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ I NA+I +V + L E G+NI + A + + +D I +++
Sbjct: 316 DSWRLAIANANIPTMVAQISTHLAEAGLNIIDML--NKSQSNLAYTLVDVDRPIPKYLVD 373
Query: 82 KLSVNVTIRFVKQF 95
+ + V+
Sbjct: 374 GIRAVQGVLSVRAL 387
>gi|16802015|ref|NP_472283.1| hypothetical protein lin2956 [Listeria innocua Clip11262]
gi|16415497|emb|CAC98181.1| lin2956 [Listeria innocua Clip11262]
gi|313616401|gb|EFR89345.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria innocua FSL S4-378]
Length = 395
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Query: 11 KIQEINFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ N ++ I I + +I +V + LG+Y +NI E+A + +
Sbjct: 302 SVNYPNVEMPYNGHPRIGICHKNIPNMVGQITTELGKYSLNILDMI--NRSKNEYAYTLI 359
Query: 70 CIDGSILNSVLEKLS----VNVTIRFVKQFE 96
ID + LE+L + V+ E
Sbjct: 360 DIDKE-TQANLEQLKSDLLAVQGVLRVRVIE 389
>gi|66813238|ref|XP_640798.1| 3-phosphoglycerate dehydrogenase [Dictyostelium discoideum AX4]
gi|74855598|sp|Q54UH8|SERA_DICDI RecName: Full=D-3-phosphoglycerate dehydrogenase; Short=3-PGDH
gi|60468832|gb|EAL66832.1| 3-phosphoglycerate dehydrogenase [Dictyostelium discoideum AX4]
Length = 407
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI V I ++ + G++ + NIL E N++ L +
Sbjct: 325 VNFPEIALPVSPSTHRILNIHNNKPGVLRDINNILSE--FNVSAQVLSTRKQIG--YIIA 380
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + +K+S +
Sbjct: 381 DVDSEASKEIKKKISSLPNSIKTRVL 406
>gi|323485641|ref|ZP_08090980.1| hypothetical protein HMPREF9474_02731 [Clostridium symbiosum
WAL-14163]
gi|323691716|ref|ZP_08105977.1| hypothetical protein HMPREF9475_00839 [Clostridium symbiosum
WAL-14673]
gi|323401052|gb|EGA93411.1| hypothetical protein HMPREF9474_02731 [Clostridium symbiosum
WAL-14163]
gi|323504260|gb|EGB20061.1| hypothetical protein HMPREF9475_00839 [Clostridium symbiosum
WAL-14673]
Length = 389
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + V + +++ +I ++ + IL +NIA+ ++A + +
Sbjct: 305 VNYPDCDMGVCASVNRVALLHMNIPNMIGQISAILAATDMNIANMT--NKSKEKYAYTLI 362
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + + +KL+ + V+
Sbjct: 363 DLENELDDLTRQKLNAIKGMMRVRVIR 389
>gi|217076639|ref|YP_002334355.1| B L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermosipho africanus TCF52B]
gi|217036492|gb|ACJ75014.1| B L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermosipho africanus TCF52B]
Length = 215
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR-SQS 61
G + I + D+ + IVN DI + + + + +N+A+ +L R +
Sbjct: 123 GGGDIKITNIDSVPCDLSWDYDTLVIVNKDIPKALEKILDAI---NVNVANLYLRRINAL 179
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E A++ + +D I N LE+++ +
Sbjct: 180 LERALTIVELDEPIDN--LEEITKIPYVYEC 208
>gi|315284209|ref|ZP_07872103.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria marthii FSL S4-120]
gi|313612146|gb|EFR86394.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria marthii FSL S4-120]
Length = 395
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 11 KIQEINFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ N ++ I I + +I +V + LG+Y +NI E+A + +
Sbjct: 302 SVNYPNVEMPYNGHPRIGICHKNIPNMVGQITTELGKYSLNILDMT--NRSKNEYAYTLI 359
Query: 70 CIDGSIL---NSVLEKLSVNVTIRFVKQFE 96
ID + + L + V+ E
Sbjct: 360 DIDKETQANLEQLKQDLLSVQGVLRVRLIE 389
>gi|313621857|gb|EFR92542.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria innocua FSL J1-023]
Length = 395
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Query: 11 KIQEINFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ N ++ I I + +I +V + LG+Y +NI E+A + +
Sbjct: 302 SVNYPNVEMPYNGHPRIGICHKNIPNMVGQITTELGKYSLNILDMI--NRSKNEYAYTLI 359
Query: 70 CIDGSILNSVLEKLS----VNVTIRFVKQFE 96
ID + LE+L + V+ E
Sbjct: 360 DIDKE-TQANLEQLKRDLLAVQGVLRVRVIE 389
>gi|300858316|ref|YP_003783299.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium
pseudotuberculosis FRC41]
gi|300685770|gb|ADK28692.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium
pseudotuberculosis FRC41]
gi|302206033|gb|ADL10375.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium
pseudotuberculosis C231]
gi|302330586|gb|ADL20780.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium
pseudotuberculosis 1002]
gi|308276270|gb|ADO26169.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium
pseudotuberculosis I19]
Length = 531
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 31/78 (39%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ ++I + D+ + D G++ VG G G NI + ++ +
Sbjct: 441 KIVRINKRGLDLRAHGFNVFFQYTDTPGVLGKVGTAFGAAGFNIDAAAMSQNSDGTGSTL 500
Query: 68 FLCIDGSILNSVLEKLSV 85
L ID S++E ++
Sbjct: 501 VLRIDKPAAESLVETIAE 518
>gi|21231273|ref|NP_637190.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|188991507|ref|YP_001903517.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas campestris pv.
campestris str. B100]
gi|21112925|gb|AAM41114.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|167733267|emb|CAP51465.1| phosphoglycerate dehydrogenase [Xanthomonas campestris pv.
campestris]
Length = 413
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 7/86 (8%), Positives = 28/86 (32%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ + + + +NI L + + +
Sbjct: 327 VNFPEVTLPEHPDSLRLLHIHRNVPGVLSQINELFSRHNLNIDGQFLRTDPKVGYVVIDV 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ++L +
Sbjct: 387 SASEELAGVLKDELGQITGTLRTRVL 412
>gi|78047446|ref|YP_363621.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035876|emb|CAJ23567.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 440
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 7/86 (8%), Positives = 28/86 (32%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ + + + +NI L + + +
Sbjct: 354 VNFPEVTLPEHAESLRLLHIHRNVPGVLSQINELFSRHNVNIDGQFLRTDPKVGYVVIDV 413
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ++L +
Sbjct: 414 SASEELAGVLKDELGQITGTLRTRVL 439
>gi|194323807|ref|ZP_03057583.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
novicida FTE]
gi|208779898|ref|ZP_03247242.1| D-3-phosphoglycerate dehydrogenase [Francisella novicida FTG]
gi|194322171|gb|EDX19653.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
novicida FTE]
gi|208744353|gb|EDZ90653.1| D-3-phosphoglycerate dehydrogenase [Francisella novicida FTG]
Length = 414
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ I ++ +I GI+ + IL IN+ +L ++ + + +
Sbjct: 328 VNFPELSLPSHRETHRILHIHQNIPGIINELNRILASKNINVEGQYLRTLENIGYVVMDI 387
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++++ +
Sbjct: 388 KSSSDEAKELIDEFKKVKATIKARYL 413
>gi|46909013|ref|YP_015402.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes str. 4b F2365]
gi|47093283|ref|ZP_00231054.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes str. 4b H7858]
gi|258611660|ref|ZP_05241221.2| D-isomer specific 2-hydroxyacid dehydrogenase [Listeria
monocytogenes FSL R2-503]
gi|293596801|ref|ZP_05264261.2| D-isomer specific 2-hydroxyacid dehydrogenase [Listeria
monocytogenes HPB2262]
gi|300763418|ref|ZP_07073416.1| D-isomer specific 2-hydroxyacid dehydrogenase [Listeria
monocytogenes FSL N1-017]
gi|46882286|gb|AAT05579.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes serotype 4b str. F2365]
gi|47018357|gb|EAL09119.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes str. 4b H7858]
gi|258605168|gb|EEW17776.1| D-isomer specific 2-hydroxyacid dehydrogenase [Listeria
monocytogenes FSL R2-503]
gi|293582448|gb|EFF94480.1| D-isomer specific 2-hydroxyacid dehydrogenase [Listeria
monocytogenes HPB2262]
gi|300515695|gb|EFK42744.1| D-isomer specific 2-hydroxyacid dehydrogenase [Listeria
monocytogenes FSL N1-017]
Length = 403
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 16 NFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
N ++ I I + +I +V + LG+Y +NI E+A + + ID
Sbjct: 315 NVEMPYNGHPRIGICHKNIPNMVGQITTELGKYSLNILDMI--NRSKNEYAYTLIDIDKE 372
Query: 75 ILNSVLEKLS----VNVTIRFVKQFE 96
+ LE+L + V+ E
Sbjct: 373 -TQANLEQLKSDLLAVQGVLRVRVIE 397
>gi|66768675|ref|YP_243437.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas campestris pv.
campestris str. 8004]
gi|66574007|gb|AAY49417.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 413
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 7/86 (8%), Positives = 28/86 (32%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ + + + +NI L + + +
Sbjct: 327 VNFPEVTLPEHPDSLRLLHIHRNVPGVLSQINELFSRHNLNIDGQFLRTDPKVGYVVIDV 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ++L +
Sbjct: 387 SASEELAGVLKDELGQITGTLRTRVL 412
>gi|134301751|ref|YP_001121719.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134049528|gb|ABO46599.1| D-isomer specific 2-hydroxyacid dehydrogenase [Francisella
tularensis subsp. tularensis WY96-3418]
Length = 411
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ I ++ +I GI+ + IL IN+ +L ++ + + +
Sbjct: 325 VNFPELSLPSHRETHRILHIHQNIPGIINELNRILASKNINVEGQYLRTLENIGYVVMDI 384
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++++ +
Sbjct: 385 KSSSDEAKELIDEFKKVKATIKARYL 410
>gi|118497834|ref|YP_898884.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
novicida U112]
gi|254373191|ref|ZP_04988680.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
novicida GA99-3549]
gi|254374645|ref|ZP_04990126.1| D-3-phosphoglycerate dehydrogenase [Francisella novicida GA99-3548]
gi|118423740|gb|ABK90130.1| D-3-phosphoglycerate dehydrogenase [Francisella novicida U112]
gi|151570918|gb|EDN36572.1| D-3-phosphoglycerate dehydrogenase [Francisella novicida GA99-3549]
gi|151572364|gb|EDN38018.1| D-3-phosphoglycerate dehydrogenase [Francisella novicida GA99-3548]
Length = 411
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ I ++ +I GI+ + IL IN+ +L ++ + + +
Sbjct: 325 VNFPELSLPSHRETHRILHIHQNIPGIINELNRILASKNINVEGQYLRTLENIGYVVMDI 384
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++++ +
Sbjct: 385 KSSSDEAKELIDEFKKVKATIKARYL 410
>gi|56708292|ref|YP_170188.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670763|ref|YP_667320.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
tularensis FSC198]
gi|254370776|ref|ZP_04986781.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254875113|ref|ZP_05247823.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|56604784|emb|CAG45863.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110321096|emb|CAL09246.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
tularensis FSC198]
gi|151569019|gb|EDN34673.1| hypothetical protein FTBG_00585 [Francisella tularensis subsp.
tularensis FSC033]
gi|254841112|gb|EET19548.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
tularensis MA00-2987]
Length = 414
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ I ++ +I GI+ + IL IN+ +L ++ + + +
Sbjct: 328 VNFPELSLPSHRETHRILHIHQNIPGIINELNRILASKNINVEGQYLRTLENIGYVVMDI 387
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++++ +
Sbjct: 388 KSSSDEAKELIDEFKKVKATIKARYL 413
>gi|187931485|ref|YP_001891469.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712394|gb|ACD30691.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 411
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ I ++ +I GI+ + IL IN+ +L ++ + + +
Sbjct: 325 VNFPELSLPSHRETHRILHIHQNIPGIINELNRILASKNINVEGQYLRTLENIGYVVMDI 384
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++++ +
Sbjct: 385 KSSSDEAKELIDEFKKVKATIKARYL 410
>gi|317131041|ref|YP_004090355.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Ethanoligenens harbinense YUAN-3]
gi|315469020|gb|ADU25624.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Ethanoligenens harbinense YUAN-3]
Length = 387
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 4/92 (4%)
Query: 5 GKPRFIKIQEINFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R I N D+ + + +++ ++ ++ + GINI + E
Sbjct: 299 GAIR-NSINFPNVDMPLSSPARVTVIHKNVPNMLSQITACFANAGINIDNII--DKSKKE 355
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A + + L++V + L + V+
Sbjct: 356 MAYTIIDAADKKLDAVADALRAVDGVIRVRVI 387
>gi|226225374|ref|YP_002759481.1| D-3-phosphoglycerate dehydrogenase [Listeria monocytogenes
Clip81459]
gi|254993635|ref|ZP_05275825.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes FSL J2-064]
gi|225877836|emb|CAS06551.1| Putative D-3-phosphoglycerate dehydrogenase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|328468292|gb|EGF39298.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes 1816]
gi|328469056|gb|EGF40010.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Listeria monocytogenes 220]
Length = 395
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 16 NFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
N ++ I I + +I +V + LG+Y +NI E+A + + ID
Sbjct: 307 NVEMPYNGHPRIGICHKNIPNMVGQITTELGKYSLNILDMI--NRSKNEYAYTLIDIDKE 364
Query: 75 ILNSVLEKLS----VNVTIRFVKQFE 96
+ LE+L + V+ E
Sbjct: 365 -TQANLEQLKSDLLAVQGVLRVRVIE 389
>gi|307693053|ref|ZP_07635290.1| putative D-3-phosphoglycerate dehydrogenase [Ruminococcaceae
bacterium D16]
Length = 390
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+C+++ +I ++ + IL + G+N+ + L ++A + + ++G I ++V ++L
Sbjct: 320 RVCLIHKNIPAMLTKITTILSDEGVNVEN--LTNKSKKDYAYTMVDLNGRIKDAVADELR 377
Query: 85 VNVTIRFVKQFE 96
+ V+
Sbjct: 378 AIPGMIRVRVIN 389
>gi|289663405|ref|ZP_06484986.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 413
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 7/86 (8%), Positives = 27/86 (31%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ + + + +NI L + + +
Sbjct: 327 VNFPEVTLPEHPDSLRLLHIHRNVPGVLSQINELFSRHNVNIDGQFLRTDPKVGYVVIDV 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + L +
Sbjct: 387 SASEELAAILKDGLGQITGTLRTRVL 412
>gi|183599856|ref|ZP_02961349.1| hypothetical protein PROSTU_03374 [Providencia stuartii ATCC 25827]
gi|188022128|gb|EDU60168.1| hypothetical protein PROSTU_03374 [Providencia stuartii ATCC 25827]
Length = 416
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 31/88 (35%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ V + ++ + G++ + + E IN+ +L + + + +
Sbjct: 328 VNFPEVSLPVHTEDTNRLLHIHENRPGMMNSINQVFTENNINVVGQYLRTAGNVGYVVID 387
Query: 69 LCIDGS-ILNSVLEKLSVNVTIRFVKQF 95
+ + +L KL +
Sbjct: 388 IITQQPDHADDILVKLKQLPGTIRARLL 415
>gi|261345611|ref|ZP_05973255.1| D-3-phosphoglycerate dehydrogenase [Providencia rustigianii DSM
4541]
gi|282566091|gb|EFB71626.1| D-3-phosphoglycerate dehydrogenase [Providencia rustigianii DSM
4541]
Length = 416
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 31/88 (35%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDV-DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ V + ++ + G++ + + + IN+ +L S + + +
Sbjct: 328 VNFPEVSLPVHTDDNNRLLHIHENRPGMMNSINQVFTDNNINVVGQYLRTSGNVGYVVID 387
Query: 69 LCIDGS-ILNSVLEKLSVNVTIRFVKQF 95
+ + VL KL +
Sbjct: 388 VMTQSPGQADEVLLKLKSLPGTIRARLL 415
>gi|218680898|ref|ZP_03528795.1| D-3-phosphoglycerate dehydrogenase [Rhizobium etli CIAT 894]
Length = 204
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 25/86 (29%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + GI+ + I G NI L T + + +
Sbjct: 118 VNFPQVQLPPRANGTRFIHVHENRPGILNSLNTIFSSRGFNIVGEFLQTHGETGYVVVEV 177
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
N +L+ L +
Sbjct: 178 EGVSETANEILDSLRQIPGTIRARLV 203
>gi|266619091|ref|ZP_06112026.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Clostridium hathewayi DSM 13479]
gi|288869389|gb|EFD01688.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Clostridium hathewayi DSM 13479]
Length = 387
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 37/95 (38%), Gaps = 3/95 (3%)
Query: 3 SDGKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+G R + + V + +++ +I ++ V L +NI+
Sbjct: 295 DNGNIRNSVNFPACDMGVCQMASRVAVLHLNIPNMIGQVTGTLAAGNVNISDMT--NKSR 352
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A + L ++ + ++KL+ + V+ +
Sbjct: 353 DKYAYTLLDLESVPDSMTIQKLNAIKGVLRVRVIK 387
>gi|160913569|ref|ZP_02076259.1| hypothetical protein EUBDOL_00045 [Eubacterium dolichum DSM 3991]
gi|158434030|gb|EDP12319.1| hypothetical protein EUBDOL_00045 [Eubacterium dolichum DSM 3991]
Length = 390
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + E+ + + ICI+N +I ++ V L GINI + ++A + L
Sbjct: 303 VNMPEVQMPQE-AKYRICIINKNIPDMISSVAAKLSAEGINIENMVS--KGRGDYAYTIL 359
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ I +LE++ I V+
Sbjct: 360 ETNDEISLELLERMRQRKGIVRVRII 385
>gi|332184366|gb|AEE26620.1| D-3-phosphoglycerate dehydrogenase [Francisella cf. novicida 3523]
Length = 411
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ I ++ +I GI+ + IL IN+ +L ++ + + +
Sbjct: 325 VNFPELSLPSHRETHRILHIHQNIPGIINELNRILASKNINVEGQYLRTLENIGYVVMDI 384
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++++ +
Sbjct: 385 KSSSDQAKDLIDEFKKVKATIKARYL 410
>gi|213691739|ref|YP_002322325.1| D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
[Bifidobacterium longum subsp. infantis ATCC 15697]
gi|213523200|gb|ACJ51947.1| D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
[Bifidobacterium longum subsp. infantis ATCC 15697]
gi|320457833|dbj|BAJ68454.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 399
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + +IN G I ++ ++ G++ V +LGE IN++ L E
Sbjct: 315 VNLPQINLGECEGVCRIAHLHDNLPGVLAHVNRVLGEENINVSFQSLAT--EGELGYVVT 372
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ + LE L ++
Sbjct: 373 DVAQKPSAATLEALRSIEGTIRMRVIS 399
>gi|212710020|ref|ZP_03318148.1| hypothetical protein PROVALCAL_01072 [Providencia alcalifaciens DSM
30120]
gi|212687227|gb|EEB46755.1| hypothetical protein PROVALCAL_01072 [Providencia alcalifaciens DSM
30120]
Length = 416
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 31/88 (35%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ V + ++ + G++ + + E IN+ +L S + + +
Sbjct: 328 VNFPEVSLPVHTDDTNRLLHIHENRPGMMNSINQVFTENNINVVGQYLRTSGNVGYVVID 387
Query: 69 LCIDGS-ILNSVLEKLSVNVTIRFVKQF 95
+ + VL KL +
Sbjct: 388 VLTQSPGQADEVLVKLKSLPGTIRARLL 415
>gi|224457414|ref|ZP_03665887.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159522|gb|ADA78913.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
tularensis NE061598]
Length = 411
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ I ++ +I GI+ + IL IN+ +L ++ + + +
Sbjct: 325 VNFPELSLPSHRETHRILHIHQNIPGIINELNRILASKNINVEGQYLRTLENIGYVVMDI 384
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++++ +
Sbjct: 385 KSSSDEAKELIDEFKKVKATIKARYL 410
>gi|254169257|ref|ZP_04876090.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Aciduliprofundum boonei T469]
gi|197621794|gb|EDY34376.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Aciduliprofundum boonei T469]
Length = 216
Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR-SQS 61
G+ + ++I+++ D+ + +V D V + IL NI + ++ R + +
Sbjct: 123 GGGEIKIVRIKDVECDIAWEYNTLVLVMRDK---VGAMSKILKNITRNIVNLYMRRVNAA 179
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
AI + D ++ L+K+ + +
Sbjct: 180 ENIAIGIIETDENLPKEDLKKVKECDYVYELFYI 213
>gi|160945591|ref|ZP_02092817.1| hypothetical protein FAEPRAM212_03120 [Faecalibacterium prausnitzii
M21/2]
gi|158443322|gb|EDP20327.1| hypothetical protein FAEPRAM212_03120 [Faecalibacterium prausnitzii
M21/2]
Length = 386
Score = 64.3 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + E++ G ICI++ + G++ + + E G+NI +
Sbjct: 297 NGNITHSVNLPEVH-QPRAGGKRICIIHKNEPGMISQITALTTEAGLNIENMV--NKSKK 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A + L G++ + EKLS + V+
Sbjct: 354 NMAYTMLDATGAVDARLSEKLSSIPAVIRVRIL 386
>gi|152975827|ref|YP_001375344.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Bacillus
cereus subsp. cytotoxis NVH 391-98]
gi|152024579|gb|ABS22349.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Bacillus
cytotoxicus NVH 391-98]
Length = 390
Score = 64.3 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 36/96 (37%), Gaps = 8/96 (8%)
Query: 5 GKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + + + I I++ ++ +V + L E+ INIA
Sbjct: 297 GNIRNSVNYPNVELPYVGKK-RITIMHQNVPNMVGQITGCLAEHHINIADMI--NRSKNS 353
Query: 64 HAISFLCIDGSILN----SVLEKLSVNVTIRFVKQF 95
A + + ID + + +++E + + V+
Sbjct: 354 WAYTMIDIDNGMDDRMKENIVENIRRITGVVAVRMI 389
>gi|260438557|ref|ZP_05792373.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Butyrivibrio crossotus DSM 2876]
gi|292809146|gb|EFF68351.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Butyrivibrio crossotus DSM 2876]
Length = 387
Score = 64.3 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 4 DGKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+G R + + V I +++ ++ I+ + + G+ GINI
Sbjct: 296 NGNIRNSVNFPACDMGVCSQAGRIAVLHKNVPNIISGLTTVFGQSGINIDKMM--NQSRG 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
E+A S + ID + + ++++ I V+ +
Sbjct: 354 EYAYSIIDIDKAGAKDIADEIATKEGILKVRVIK 387
>gi|295103098|emb|CBL00642.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Faecalibacterium prausnitzii SL3/3]
Length = 386
Score = 64.3 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + E++ G ICI++ + G++ + + E G+NI +
Sbjct: 297 NGNITHSVNLPEVH-QPRAGGKRICIIHKNEPGMISQITALTTEAGLNIENMV--NKSKK 353
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A + L G++ + EKLS + V+
Sbjct: 354 NMAYTMLDATGAVDARLSEKLSSIPAVIRVRIL 386
>gi|168335138|ref|ZP_02693246.1| D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein
[Epulopiscium sp. 'N.t. morphotype B']
Length = 387
Score = 64.3 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-NSVL 80
+ I +++ +I +V V NIL + +NI + E A + + +D ++
Sbjct: 315 NKPRITLIHKNIPKMVGQVTNILADENLNIDNMI--NKSRGEIAYTVVDLDSLNDAPKII 372
Query: 81 EKLSVNVTIRFVKQF 95
L + V+
Sbjct: 373 SLLEQIPGMVKVRLI 387
>gi|227541455|ref|ZP_03971504.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227182737|gb|EEI63709.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 531
Score = 64.3 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 3/96 (3%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
D + R I + D+ + + D G + G+ LG GINI + + +
Sbjct: 437 DKEERIITLGRRPLDLHATGKNLILRYQDHPGAIGKAGSRLGAAGINILAAAMSIDRDSS 496
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
A L +DG + LE + + ++
Sbjct: 497 AATLVLRVDGDVAQETLEDCAQ---ALKATAVKIDL 529
>gi|239621155|ref|ZP_04664186.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|322689517|ref|YP_004209251.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium longum subsp.
infantis 157F]
gi|239515616|gb|EEQ55483.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|320460853|dbj|BAJ71473.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium longum subsp.
infantis 157F]
Length = 399
Score = 63.9 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + +IN G I ++ ++ G++ V ++LGE IN++ L E
Sbjct: 315 VNLPQINLGECKGVCRIAHLHDNLPGVLAHVNHVLGEENINVSFQSLAT--EGELGYVVT 372
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ + LE L ++
Sbjct: 373 DVAQKPSAATLEALRNIEGTIRMRVIS 399
>gi|23335464|ref|ZP_00120700.1| COG0111: Phosphoglycerate dehydrogenase and related dehydrogenases
[Bifidobacterium longum DJO10A]
gi|189439033|ref|YP_001954114.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium longum DJO10A]
gi|189427468|gb|ACD97616.1| Phosphoglycerate dehydrogenase [Bifidobacterium longum DJO10A]
gi|291516658|emb|CBK70274.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium longum subsp.
longum F8]
Length = 399
Score = 63.9 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + +IN G I ++ ++ G++ V ++LGE IN++ L E
Sbjct: 315 VNLPQINLGECKGVCRIAHLHDNLPGVLAHVNHVLGEENINVSFQSLAT--EGELGYVVT 372
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ + LE L ++
Sbjct: 373 DVAQKPSAATLEALRNIEGTIRMRVIS 399
>gi|226356500|ref|YP_002786240.1| L-serine dehydratase subunit beta [Deinococcus deserti VCD115]
gi|226318490|gb|ACO46486.1| putative L-serine dehydratase, beta subunit (L-serine
ammonia-lyase) (L-serine deaminase) [Deinococcus deserti
VCD115]
Length = 221
Score = 63.9 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 35/93 (37%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + +Q + + + ++ D +G++ + + G+NIA R
Sbjct: 123 GGGVIQVTHVQGLGVNFSASSPTVLLLYTDAVGMIARIAATIAADGVNIATLTCTRQARG 182
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A+ + +D + L L+ + +V+
Sbjct: 183 GQALLAVELDQPLSVEALAFLNRWPDMGWVRLL 215
>gi|83859827|ref|ZP_00953347.1| D-3-phosphoglycerate dehydrogenase [Oceanicaulis alexandrii
HTCC2633]
gi|83852186|gb|EAP90040.1| D-3-phosphoglycerate dehydrogenase [Oceanicaulis alexandrii
HTCC2633]
Length = 407
Score = 63.9 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 31/88 (35%), Gaps = 3/88 (3%)
Query: 10 IKIQEIN-FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E+ + GR I + + G + + + + G N+A L + +
Sbjct: 321 VNFPEVEPGPIQPGRTRILAPHRNRPGFLRRLNDAAEQAGANVAAQFL--QTKGDLGYAV 378
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++G + L+++ + +
Sbjct: 379 ADLEGELPEDFLDRVRAIDGTIRARLIK 406
>gi|227488059|ref|ZP_03918375.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227091921|gb|EEI27233.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 531
Score = 63.9 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 3/96 (3%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
D + R I + D+ + + D G + G+ LG GINI + + +
Sbjct: 437 DKEERIITLGRRPLDLHATGKNLILRYQDHPGAIGKAGSRLGAAGINILAAAMSIDRDSS 496
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
A L +DG + LE + + ++
Sbjct: 497 AATLVLRVDGDVAQETLEDCAQ---ALKATAVKIDL 529
>gi|122879159|ref|YP_200782.6| D-3-phosphoglycerate dehydrogenase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|166711919|ref|ZP_02243126.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas oryzae pv.
oryzicola BLS256]
gi|188576681|ref|YP_001913610.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188576872|ref|YP_001913801.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188521133|gb|ACD59078.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188521324|gb|ACD59269.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 413
Score = 63.9 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 7/86 (8%), Positives = 28/86 (32%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ + + + +NI L + + +
Sbjct: 327 VNFPEVTLPEHPDSLRLLHIHRNVPGVLSQINELFSRHNLNIDGQFLRTDPKVGYVVIDV 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + L+ +
Sbjct: 387 SASEELAAILKDGLAQITGTLRTRVL 412
>gi|325925157|ref|ZP_08186570.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas perforans 91-118]
gi|325544411|gb|EGD15781.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas perforans 91-118]
Length = 413
Score = 63.9 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 7/86 (8%), Positives = 28/86 (32%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ + + + +NI L + + +
Sbjct: 327 VNFPEVTLPEHAESLRLLHIHRNVPGVLSQINELFSRHNVNIDGQFLRTDPKVGYVVIDV 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ++L +
Sbjct: 387 SASEELAGVLKDELGQITGTLRTRVL 412
>gi|256832290|ref|YP_003161017.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Jonesia
denitrificans DSM 20603]
gi|256685821|gb|ACV08714.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Jonesia
denitrificans DSM 20603]
Length = 416
Score = 63.9 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 2/85 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + + I ++ + G++ V N L + +NI L E
Sbjct: 327 VNLPNLALETTGSITRIAFLHRNTPGVLAAVNNALATHNVNIDGQLLAT--RGEFGYVVT 384
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQ 94
S+ VL L ++
Sbjct: 385 DAGSSVDPEVLNALKDIDQYIRIRV 409
>gi|58038554|ref|YP_190518.1| D-3-phosphoglycerate dehydrogenase [Gluconobacter oxydans 621H]
gi|58000968|gb|AAW59862.1| D-3-phosphoglycerate dehydrogenase [Gluconobacter oxydans 621H]
Length = 416
Score = 63.9 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 1/87 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + V+A+ GI+ + ++ N+ +L + +
Sbjct: 326 VNFPSVQLPERPRGTRFMHVHANRPGIMRQINDLFASQNCNVTAQYLQTDGEVGYVVVEA 385
Query: 70 CIDGS-ILNSVLEKLSVNVTIRFVKQF 95
+G + +L+ L +
Sbjct: 386 ESEGPDMDTKLLDGLKALDGTLRARLL 412
>gi|253681813|ref|ZP_04862610.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum D str. 1873]
gi|253561525|gb|EES90977.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum D str. 1873]
Length = 226
Score = 63.9 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 22/71 (30%), Gaps = 1/71 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I+ + + + D G++ + +L INI + R +
Sbjct: 127 GGGNILISDIEGQAVEFKGDYPTLITTHNDTPGVLSKITTMLYSQNINIGSMKVYRDGLS 186
Query: 63 EHAISFLCIDG 73
A L D
Sbjct: 187 -TATMALETDN 196
>gi|294624574|ref|ZP_06703249.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292601109|gb|EFF45171.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 413
Score = 63.9 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 7/86 (8%), Positives = 28/86 (32%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ + + + +NI L + + +
Sbjct: 327 VNFPEVTLPEHAESLRLLHIHRNVPGVLSQINELFSRHNVNIDGQFLRTDPKVGYVVIDV 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ++L +
Sbjct: 387 GASEELAGVLKDELGQITGTLRTRVL 412
>gi|312132473|ref|YP_003999812.1| sera2 [Bifidobacterium longum subsp. longum BBMN68]
gi|311773400|gb|ADQ02888.1| SerA2 [Bifidobacterium longum subsp. longum BBMN68]
Length = 399
Score = 63.9 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + +IN G I ++ ++ G++ V ++LGE IN++ L E
Sbjct: 315 VNLPQINLGECKGVCRIAHLHDNLPGVLAHVNHVLGEENINVSFQSLAT--EGELGYVVT 372
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ + + LE L ++
Sbjct: 373 DVAQTPSAATLEALRNIEGTIRMRVIS 399
>gi|227538801|ref|ZP_03968850.1| phosphoserine phosphatase and phosphoglycerate dehydrogenase
(D-3-phosphoglycerate dehydrogenase) fusion
[Sphingobacterium spiritivorum ATCC 33300]
gi|300770324|ref|ZP_07080203.1| phosphoserine phosphatase and phosphoglycerate dehydrogenase fusion
[Sphingobacterium spiritivorum ATCC 33861]
gi|227241310|gb|EEI91325.1| phosphoserine phosphatase and phosphoglycerate dehydrogenase
(D-3-phosphoglycerate dehydrogenase) fusion
[Sphingobacterium spiritivorum ATCC 33300]
gi|300762800|gb|EFK59617.1| phosphoserine phosphatase and phosphoglycerate dehydrogenase fusion
[Sphingobacterium spiritivorum ATCC 33861]
Length = 430
Score = 63.9 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ ++ ++ G++ + NI E INI L +A++ L + ++++L
Sbjct: 360 HRLLHIHKNVPGVMAQINNIYAENNINIVAQFLMTRGEIGYAVTDLNV--EYEKDLIKQL 417
Query: 84 SVNVTIRFVKQF 95
+
Sbjct: 418 KKIDNTIKFRIL 429
>gi|84623669|ref|YP_451041.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|84367609|dbj|BAE68767.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 386
Score = 63.9 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 7/86 (8%), Positives = 28/86 (32%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ + + + +NI L + + +
Sbjct: 300 VNFPEVTLPEHPDSLRLLHIHRNVPGVLSQINELFSRHNLNIDGQFLRTDPKVGYVVIDV 359
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + L+ +
Sbjct: 360 SASEELAAILKDGLAQITGTLRTRVL 385
>gi|294666689|ref|ZP_06731925.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603514|gb|EFF46929.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 413
Score = 63.9 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 7/86 (8%), Positives = 28/86 (32%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ + + + +NI L + + +
Sbjct: 327 VNFPEVTLPEHAESLRLLHIHRNVPGVLSQINELFSRHNVNIDGQFLRTDPKVGYVVIDV 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ++L +
Sbjct: 387 GASEELAGVLKDELGQITGTLRTRVL 412
>gi|23465874|ref|NP_696477.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium longum NCC2705]
gi|227547545|ref|ZP_03977594.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|317483060|ref|ZP_07942061.1| D-isomer specific 2-hydroxyacid dehydrogenase [Bifidobacterium sp.
12_1_47BFAA]
gi|322691472|ref|YP_004221042.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium longum subsp.
longum JCM 1217]
gi|23326576|gb|AAN25113.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium longum NCC2705]
gi|227211955|gb|EEI79851.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|316915466|gb|EFV36887.1| D-isomer specific 2-hydroxyacid dehydrogenase [Bifidobacterium sp.
12_1_47BFAA]
gi|320456328|dbj|BAJ66950.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 399
Score = 63.5 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + +IN G I ++ ++ G++ V ++LGE IN++ L E
Sbjct: 315 VNLPQINLGECKGVCRIAHLHDNLPGVLAHVNHVLGEENINVSFQSLAT--EGELGYVVT 372
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ + + LE L ++
Sbjct: 373 DVAQTPSAATLEALRNIEGTIRMRVIS 399
>gi|227356383|ref|ZP_03840771.1| D-3-phosphoglycerate dehydrogenase [Proteus mirabilis ATCC 29906]
gi|227163493|gb|EEI48414.1| D-3-phosphoglycerate dehydrogenase [Proteus mirabilis ATCC 29906]
Length = 416
Score = 63.5 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 32/88 (36%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + GI+ + N+ E IN+A +L + + + +
Sbjct: 328 VNFPEVSLPSHGDDVNRLLHIHENRPGIMNSINNVFTEENINVAAQYLRTAGNVGYVVID 387
Query: 69 LCIDGSILNS-VLEKLSVNVTIRFVKQF 95
+ VL+KL +
Sbjct: 388 VTTQTKAQAELVLQKLKGLPGTIRARML 415
>gi|108762751|ref|YP_634480.1| D-3-phosphoglycerate dehydrogenase [Myxococcus xanthus DK 1622]
gi|108466631|gb|ABF91816.1| D-3-phosphoglycerate dehydrogenase [Myxococcus xanthus DK 1622]
Length = 417
Score = 63.5 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I + G I V+ +I G++ + I+ + NI L + +
Sbjct: 333 VNFPNIEAPLIPGTHRILNVHRNIPGVLRDINRIVSDLNANIHAQVLSTDANIG--YLLM 390
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D + V E ++ T +
Sbjct: 391 DLDQDVSTPVCEAIAGLETDIKTRILS 417
>gi|289595877|ref|YP_003482573.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Aciduliprofundum boonei T469]
gi|289533664|gb|ADD08011.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Aciduliprofundum boonei T469]
Length = 216
Score = 63.5 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR-SQS 61
G+ + ++I+++ D+ + +V D V + IL NI + ++ R + +
Sbjct: 123 GGGEIKIVRIKDVECDIAWEYNTLVLVMKDK---VGAMSKILKNITRNIVNLYMRRVNAA 179
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
AI + +D ++ L+K+ + +
Sbjct: 180 ENIAIGIIEMDENLPKEDLKKVEECDYVYELFYI 213
>gi|296454443|ref|YP_003661586.1| D-isomer specific 2-hydroxyacid dehydrogenase [Bifidobacterium
longum subsp. longum JDM301]
gi|296183874|gb|ADH00756.1| D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein
[Bifidobacterium longum subsp. longum JDM301]
Length = 399
Score = 63.5 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + +IN G I ++ ++ G++ V +LGE IN++ L E
Sbjct: 315 VNLPQINLGECKGVCRIAHLHDNLPGVLAHVNRVLGEENINVSFQSLAT--EGELGYVVT 372
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ + LE L ++
Sbjct: 373 DVAQKPSAATLEALRNIEGTVRMRVIS 399
>gi|197285882|ref|YP_002151754.1| D-3-phosphoglycerate dehydrogenase [Proteus mirabilis HI4320]
gi|194683369|emb|CAR44076.1| D-3-phosphoglycerate dehydrogenase [Proteus mirabilis HI4320]
Length = 416
Score = 63.5 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 32/88 (36%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + ++ + GI+ + N+ E IN+A +L + + + +
Sbjct: 328 VNFPEVSLPSHGDDVNRLLHIHENRPGIMNSINNVFTEENINVAAQYLRTAGNVGYVVID 387
Query: 69 LCIDGSILNS-VLEKLSVNVTIRFVKQF 95
+ VL+KL +
Sbjct: 388 VTTQTKAQAELVLQKLKGLPGTIRARML 415
>gi|256255607|ref|ZP_05461143.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti B1/94]
gi|261222811|ref|ZP_05937092.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti B1/94]
gi|260921395|gb|EEX88048.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti B1/94]
Length = 478
Score = 63.5 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEY 47
FSDGKPRFI+I+ IN D ++G M+ + N D+ G++ +G I G++
Sbjct: 433 FSDGKPRFIQIKGINLDAEVGPHMLYVTNKDVPGMIGLLGTICGKH 478
>gi|268591719|ref|ZP_06125940.1| D-3-phosphoglycerate dehydrogenase [Providencia rettgeri DSM 1131]
gi|291312680|gb|EFE53133.1| D-3-phosphoglycerate dehydrogenase [Providencia rettgeri DSM 1131]
Length = 416
Score = 63.5 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 31/88 (35%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ V ++ + GI+ + + E IN+ +L S + + +
Sbjct: 328 VNFPEVSLPVHTEDTNRFLHIHENRPGILNSINQVFTENNINVVGQYLRTSGNVGYVVID 387
Query: 69 LCIDGSI-LNSVLEKLSVNVTIRFVKQF 95
+ + + L+KL +
Sbjct: 388 VLMQTPNQTDEALQKLKDLPGTIRARLL 415
>gi|325125735|gb|ADY85065.1| Phosphoglycerate dehydrogenase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 231
Score = 63.5 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + ++ + I +++ +I ++ + L GINI + L +
Sbjct: 136 GNIINSVNLPNVSAPFE-SDHRITLIHKNIPNMIGQISTYLAGRGINIEN--LVNKAKDK 192
Query: 64 HAISFLC---IDGSILNSVLEKLSVNVTIRFVKQFE 96
+A + + ID + + V+ L + V+
Sbjct: 193 YAYTMINIDKIDQATQDKVVPNLEQIPAVTRVRILT 228
>gi|71898445|ref|ZP_00680617.1| Amino acid-binding ACT:D-isomer specific 2-hydroxyacid
dehydrogenase, catalytic region:D-isomer specific
2-hydroxyacid dehydrogenase, NAD-binding [Xylella
fastidiosa Ann-1]
gi|71731758|gb|EAO33817.1| Amino acid-binding ACT:D-isomer specific 2-hydroxyacid
dehydrogenase, catalytic region:D-isomer specific
2-hydroxyacid dehydrogenase, NAD-binding [Xylella
fastidiosa Ann-1]
Length = 413
Score = 63.5 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 8/86 (9%), Positives = 33/86 (38%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ +G + + ++ ++ G++ + + + +NI L + + + +
Sbjct: 327 VNFPEVSLPEHVGSMRLLHIHRNVPGVLSHINELFSHHNVNIDGQFLRTDATLGYVVIDI 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ ++ E L+ +
Sbjct: 387 SASQTQALALKEALTQVPGTLRTRLL 412
>gi|315641475|ref|ZP_07896547.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
italicus DSM 15952]
gi|315482763|gb|EFU73287.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
italicus DSM 15952]
Length = 394
Score = 63.5 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + +++ ++ ++ + + + E+GINI + + A + +
Sbjct: 302 VNFPTVDMSFR-SPNRLTVIHQNVPNMLGTISSTIAEFGINIDNMV--NRGRDQFAYTLV 358
Query: 70 CI---DGSILNSVLEKLSVNVTIRFVKQFE 96
+ D + L V +KL+ +I V+ +
Sbjct: 359 DVAEEDAAKLQKVADKLTETESIVRVRVIQ 388
>gi|325922443|ref|ZP_08184210.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas gardneri ATCC
19865]
gi|325547063|gb|EGD18150.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas gardneri ATCC
19865]
Length = 420
Score = 63.5 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 8/86 (9%), Positives = 29/86 (33%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ + + + +NI L + + +
Sbjct: 334 VNFPEVTLPEHPDSLRLLHIHRNVPGVLSKINELFSRHNVNIDGQFLRTDAKVGYVVIDV 393
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ ++ E L+ +
Sbjct: 394 SASEAQATALKEGLAQIQGTLRTRIL 419
>gi|157364796|ref|YP_001471563.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermotoga lettingae TMO]
gi|157315400|gb|ABV34499.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermotoga lettingae TMO]
Length = 222
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ-S 61
G R KI I+ ++ + I+N D G + + L G NIA+ +L R
Sbjct: 123 GGGAIRITKINGIDCNLTWAYDTLIIINKDEQGALSKI---LSNLGANIANLYLRRINLL 179
Query: 62 TEHAISFLCIDGSI 75
A++ + +D +
Sbjct: 180 VGRALTIIELDSPV 193
>gi|170730527|ref|YP_001775960.1| D-3-phosphoglycerate dehydrogenase [Xylella fastidiosa M12]
gi|167965320|gb|ACA12330.1| D-3-phosphoglycerate dehydrogenase [Xylella fastidiosa M12]
Length = 413
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 8/86 (9%), Positives = 33/86 (38%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ +G + + ++ ++ G++ + + + +NI L + + + +
Sbjct: 327 VNFPEVSLPEHVGSMRLLHIHRNVPGVLSHINELFSRHNVNIDGQFLRTDATLGYVVIDI 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ ++ E L+ +
Sbjct: 387 GASQTQALALKEALTQVPGTLRTRLL 412
>gi|71274428|ref|ZP_00650716.1| Amino acid-binding ACT:D-isomer specific 2-hydroxyacid
dehydrogenase, catalytic region:D-isomer specific
2-hydroxyacid dehydrogenase, NAD-binding [Xylella
fastidiosa Dixon]
gi|71900424|ref|ZP_00682556.1| Amino acid-binding ACT:D-isomer specific 2-hydroxyacid
dehydrogenase, catalytic region:D-isomer specific
2-hydroxyacid dehydrogenase, NAD-binding [Xylella
fastidiosa Ann-1]
gi|71164160|gb|EAO13874.1| Amino acid-binding ACT:D-isomer specific 2-hydroxyacid
dehydrogenase, catalytic region:D-isomer specific
2-hydroxyacid dehydrogenase, NAD-binding [Xylella
fastidiosa Dixon]
gi|71729789|gb|EAO31888.1| Amino acid-binding ACT:D-isomer specific 2-hydroxyacid
dehydrogenase, catalytic region:D-isomer specific
2-hydroxyacid dehydrogenase, NAD-binding [Xylella
fastidiosa Ann-1]
Length = 413
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 8/86 (9%), Positives = 33/86 (38%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ +G + + ++ ++ G++ + + + +NI L + + + +
Sbjct: 327 VNFPEVSLPEHVGSMRLLHIHRNVPGVLSHINELFSRHNVNIDGQFLRTDATLGYVVIDI 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ ++ E L+ +
Sbjct: 387 GASQTQALALKEALTQVPGTLRTRLL 412
>gi|258542285|ref|YP_003187718.1| D-3-phosphoglycerate dehydrogenase [Acetobacter pasteurianus IFO
3283-01]
gi|256633363|dbj|BAH99338.1| D-3-phosphoglycerate dehydrogenase [Acetobacter pasteurianus IFO
3283-01]
gi|256636422|dbj|BAI02391.1| D-3-phosphoglycerate dehydrogenase [Acetobacter pasteurianus IFO
3283-03]
gi|256639475|dbj|BAI05437.1| D-3-phosphoglycerate dehydrogenase [Acetobacter pasteurianus IFO
3283-07]
gi|256642531|dbj|BAI08486.1| D-3-phosphoglycerate dehydrogenase [Acetobacter pasteurianus IFO
3283-22]
gi|256645586|dbj|BAI11534.1| D-3-phosphoglycerate dehydrogenase [Acetobacter pasteurianus IFO
3283-26]
gi|256648639|dbj|BAI14580.1| D-3-phosphoglycerate dehydrogenase [Acetobacter pasteurianus IFO
3283-32]
gi|256651692|dbj|BAI17626.1| D-3-phosphoglycerate dehydrogenase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654683|dbj|BAI20610.1| D-3-phosphoglycerate dehydrogenase [Acetobacter pasteurianus IFO
3283-12]
Length = 419
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 8/90 (8%), Positives = 24/90 (26%), Gaps = 6/90 (6%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + ++ G+++ + I N+ L E +
Sbjct: 328 VNFPGVQLPQSPRGTRFMHAHRNVPGMMMRLNEIFMNADCNVTAQFLQTD--GEIGYVVI 385
Query: 70 CID----GSILNSVLEKLSVNVTIRFVKQF 95
D + + +L+ L +
Sbjct: 386 EADTGGNTELDDRLLQDLRGMEGTIRARLI 415
>gi|90415438|ref|ZP_01223372.1| hypothetical protein GB2207_08981 [marine gamma proteobacterium
HTCC2207]
gi|90332761|gb|EAS47931.1| hypothetical protein GB2207_08981 [marine gamma proteobacterium
HTCC2207]
Length = 389
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + +I + I N ++ ++ V ++L + IN+
Sbjct: 300 NGNILNSVNYPKIRMSRNG-GTRITFTNKNVPKVLGSVLSVLADGEINVVDMV--NKSRD 356
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E A + + I+G + +S+ ++ + V+
Sbjct: 357 EIAYNIIDIEGDLNDSLKAQIEAVEGVVHVRVI 389
>gi|331003062|ref|ZP_08326574.1| hypothetical protein HMPREF0491_01436 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413106|gb|EGG92481.1| hypothetical protein HMPREF0491_01436 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 387
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ +++ +I ++ + + + G NI+ L A + + I+ S++ +L+
Sbjct: 318 RVSLLHQNIPNMIGQITSAFAKNGYNISD--LTNKSKGTKAYTLIDIETKASESLINELN 375
Query: 85 VNVTIRFVKQFE 96
I V+ +
Sbjct: 376 AIEGILKVRIIK 387
>gi|290476421|ref|YP_003469326.1| D-3-phosphoglycerate dehydrogenase [Xenorhabdus bovienii SS-2004]
gi|289175759|emb|CBJ82562.1| D-3-phosphoglycerate dehydrogenase [Xenorhabdus bovienii SS-2004]
Length = 413
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ + + ++ + GI+ + + + INI +L + + +
Sbjct: 325 VNFPEVSLPIHAKDTHRLLHIHENRPGILTSINQVFTDQEINIEAQYLRTNGDIGYVVID 384
Query: 69 LCIDGSILNS-VLEKLSVNVTIRFVKQF 95
+ VL+ L +
Sbjct: 385 ITTQNPAQAEMVLQNLKALSGTIRSRLL 412
>gi|28199141|ref|NP_779455.1| D-3-phosphoglycerate dehydrogenase [Xylella fastidiosa Temecula1]
gi|182681872|ref|YP_001830032.1| D-3-phosphoglycerate dehydrogenase [Xylella fastidiosa M23]
gi|28057239|gb|AAO29104.1| D-3-phosphoglycerate dehydrogenase [Xylella fastidiosa Temecula1]
gi|182631982|gb|ACB92758.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Xylella
fastidiosa M23]
gi|307578126|gb|ADN62095.1| D-3-phosphoglycerate dehydrogenase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 413
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 8/86 (9%), Positives = 33/86 (38%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ +G + + ++ ++ G++ + + + +NI L + + + +
Sbjct: 327 VNFPEVSLPEHVGSMRLLHIHRNVPGVLSHINELFSRHNVNIDGQFLRTDATLGYVVIDI 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ ++ E L+ +
Sbjct: 387 GASQTQALALKEALTQVPGTLRTRLL 412
>gi|15838797|ref|NP_299485.1| D-3-phosphoglycerate dehydrogenase [Xylella fastidiosa 9a5c]
gi|9107351|gb|AAF85005.1|AE004033_9 D-3-phosphoglycerate dehydrogenase [Xylella fastidiosa 9a5c]
Length = 413
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 8/86 (9%), Positives = 33/86 (38%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ +G + + ++ ++ G++ + + + +NI L + + + +
Sbjct: 327 VNFPEVSLPEHVGSMRLLHIHRNVPGVLSHINELFSRHNVNIDGQFLRTDATLGYVVIDI 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ ++ E L+ +
Sbjct: 387 GASQTQALALKEALTQVPGTLRTRLL 412
>gi|330840994|ref|XP_003292491.1| 3-phosphoglycerate dehydrogenase [Dictyostelium purpureum]
gi|325077266|gb|EGC30990.1| 3-phosphoglycerate dehydrogenase [Dictyostelium purpureum]
Length = 407
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 28/86 (32%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ I ++ + G++ + NIL E N++ L +
Sbjct: 325 VNFPEVTMPYSPSTHRILNIHNNKPGVLRDINNILSE--FNVSGQVLSTRKQIG--YIIA 380
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + +K+S +
Sbjct: 381 DVDSKASKEIKKKISDLPNSIRTRIL 406
>gi|77163711|ref|YP_342236.1| D-isomer specific 2-hydroxyacid dehydrogenase [Nitrosococcus oceani
ATCC 19707]
gi|254435128|ref|ZP_05048635.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain,
putative [Nitrosococcus oceani AFC27]
gi|76882025|gb|ABA56706.1| D-3-phosphoglycerate dehydrogenase [Nitrosococcus oceani ATCC
19707]
gi|207088239|gb|EDZ65511.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain,
putative [Nitrosococcus oceani AFC27]
Length = 387
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 33/93 (35%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + I NA++ +V + L E G+NI
Sbjct: 298 NGNVQNSVNFPDAVLPRT-DSWRLAIANANVPTMVAQISTHLAEAGLNIIDML--NKSQN 354
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + + +D I +++ +S + V+
Sbjct: 355 DLAYTLVDVDRPIPKYLVDGISAVQGMLSVRAL 387
>gi|331268590|ref|YP_004395082.1| L-serine dehydratase, iron-sulfur-dependent subunit beta
[Clostridium botulinum BKT015925]
gi|329125140|gb|AEB75085.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Clostridium botulinum BKT015925]
Length = 226
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 22/71 (30%), Gaps = 1/71 (1%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I+ + + + D G++ + +L INI + R +
Sbjct: 127 GGGNILIFDIEGQAVEFKGDYPTLITNHNDTPGVISKITTMLYSENINIGSMKVYRDALS 186
Query: 63 EHAISFLCIDG 73
A L D
Sbjct: 187 -TATMALETDN 196
>gi|306821668|ref|ZP_07455266.1| L-serine ammonia-lyase beta subunit [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550413|gb|EFM38406.1| L-serine ammonia-lyase beta subunit [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 234
Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G + + I + D + + D GI+ FV +L E NI ++
Sbjct: 140 GGGNIKIVDIDGLKIDFTNVFPTLILKYEDQKGIISFVSTLLAENEYNIEKMI--TEKNG 197
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ I + + K+ N K
Sbjct: 198 NVVTLLVEISEELTEEIKAKVLHNERFILTKYIS 231
>gi|139439060|ref|ZP_01772512.1| Hypothetical protein COLAER_01518 [Collinsella aerofaciens ATCC
25986]
gi|133775407|gb|EBA39227.1| Hypothetical protein COLAER_01518 [Collinsella aerofaciens ATCC
25986]
Length = 387
Score = 62.7 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I ++A++ ++ + IL + N+ + E+A + D + +S +E L
Sbjct: 318 RIACLHANVPNMIGQITAILAKDNANVQRMT--NESAGENAYTMFDTDEHLDSSTIEALK 375
Query: 85 VNVTIRFVKQFE 96
++ V+ +
Sbjct: 376 QIPSMYRVRVIK 387
>gi|162147658|ref|YP_001602119.1| D-3-phosphoglycerate dehydrogenase [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786235|emb|CAP55817.1| D-3-phosphoglycerate dehydrogenase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 421
Score = 62.7 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 25/88 (28%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + V++++ GI++ + I NI +L + +
Sbjct: 330 VNFPTVQLPESPRGTRFMHVHSNVPGIMLQINEIFMSENSNITAQYLQTDGELGYVVVEA 389
Query: 70 CIDGSILNS--VLEKLSVNVTIRFVKQF 95
I +L +L +
Sbjct: 390 DTGRDIDKDNRILARLRNLKGTIRARLL 417
>gi|289668860|ref|ZP_06489935.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 248
Score = 62.7 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 7/86 (8%), Positives = 27/86 (31%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ + + + +NI L + + +
Sbjct: 162 VNFPEVTLPEHPDSLRLLHIHRNVPGVLSQINELFSRHNVNIDGQFLRTDPKVGYVVIDV 221
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + L +
Sbjct: 222 SASEELAAILKDGLGQITGTLRTRVL 247
>gi|21242588|ref|NP_642170.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas axonopodis pv.
citri str. 306]
gi|21108048|gb|AAM36706.1| D-3-phosphoglycerate dehydrogenase [Xanthomonas axonopodis pv.
citri str. 306]
Length = 413
Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 7/86 (8%), Positives = 28/86 (32%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ + + + +NI L + + +
Sbjct: 327 VNFPEVTLPEHAESLRLLHIHRNVPGVLSQINELFSRHNVNIDGQFLRTDPKVGYVVIDV 386
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ++L +
Sbjct: 387 GASEELAGVLKDELGQITGTLRTRIL 412
>gi|187479563|ref|YP_787588.1| D-3-phosphoglycerate dehydrogenase [Bordetella avium 197N]
gi|115424150|emb|CAJ50703.1| D-3-phosphoglycerate dehydrogenase [Bordetella avium 197N]
Length = 399
Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+++ G + V+ + G + + ++L E+G+NI L +
Sbjct: 316 VNFPELSYVEPAGAARLLHVHRNAPGALGTLTSLLAEHGLNIVSQTL--QTRGQIGYVLT 373
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+DG + ++++ L + +
Sbjct: 374 DVDGIVDDALIAALRQHPITVRCDRL 399
>gi|210631431|ref|ZP_03296896.1| hypothetical protein COLSTE_00781 [Collinsella stercoris DSM 13279]
gi|210160036|gb|EEA91007.1| hypothetical protein COLSTE_00781 [Collinsella stercoris DSM 13279]
Length = 427
Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I ++A++ ++ + IL + N+ + E+A + D + + +E L
Sbjct: 358 RIACLHANVPNMIGQITAILAKDNANVQRMV--NESAGENAYTMFDTDEHLDRATIEALK 415
Query: 85 VNVTIRFVKQFE 96
++ V+ +
Sbjct: 416 QIPSMYRVRVIK 427
>gi|167627657|ref|YP_001678157.1| D-3-phosphoglycerate dehydrogenase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597658|gb|ABZ87656.1| D-3-phosphoglycerate dehydrogenase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 411
Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ I ++ +I G + + IL IN+ +L ++ + + +
Sbjct: 325 VNFPELSLPSHTETHRILHIHQNIPGTMNELNKILAAKNINVEGQYLRTLENIGYVVMDI 384
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++++ T +
Sbjct: 385 KSTSDEAKDLVDEFKKIKTTIKARFL 410
>gi|241668229|ref|ZP_04755807.1| D-3-phosphoglycerate dehydrogenase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876764|ref|ZP_05249474.1| D-3-phosphoglycerate dehydrogenase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842785|gb|EET21199.1| D-3-phosphoglycerate dehydrogenase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 411
Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ I ++ +I G + + IL IN+ +L ++ + + +
Sbjct: 325 VNFPELSLPSHTETHRILHIHQNIPGTMNELNKILAAKNINVEGQYLRTLENIGYVVMDI 384
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++++ T +
Sbjct: 385 KSTSDEAKDLVDEFKKIKTTIKARFL 410
>gi|115314577|ref|YP_763300.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
holarctica OSU18]
gi|115129476|gb|ABI82663.1| phosphoglycerate dehydrogenase [Francisella tularensis subsp.
holarctica OSU18]
Length = 414
Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ I ++ +I GI+ + IL IN+ +L ++ + + +
Sbjct: 328 VNFSELSLPSHRETHRILHIHQNIPGIINELNRILASKNINVEGQYLRTLENIGYVVMDI 387
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++++ +
Sbjct: 388 KSSSDEAKELIDEFKKVKATIKARYL 413
>gi|295657214|ref|XP_002789178.1| D-3-phosphoglycerate dehydrogenase [Paracoccidioides brasiliensis
Pb01]
gi|226284495|gb|EEH40061.1| D-3-phosphoglycerate dehydrogenase [Paracoccidioides brasiliensis
Pb01]
Length = 608
Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 26/113 (23%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHF---------HL 56
+P ++ ++ N D G + VG+ILG+ G+NI +
Sbjct: 485 QPLISRLGRFTTSFAPEGTLLICHNYDSPGKIGVVGSILGKGGVNINFMGVAPVSKSLLV 544
Query: 57 GRSQST-----------------EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
G+ + A+ L +D ++ ++V++ L +
Sbjct: 545 GQKIKGLGEVKAGLDETGCYEPEKEALMILGVDRTVEDNVVKALVEEGGALSI 597
>gi|262197783|ref|YP_003268992.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Haliangium ochraceum DSM 14365]
gi|262081130|gb|ACY17099.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Haliangium ochraceum DSM 14365]
Length = 410
Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 7/86 (8%), Positives = 28/86 (32%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ +++ + ++ + G++ + +NI HL + +
Sbjct: 326 VNFPQLSLAPQHNAHRLLHIHRNQPGVLAAMNRAFAASELNILGQHLQTTPELGYV--VT 383
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + + ++L+ +
Sbjct: 384 DVDRQNTDDLGDELAKLPGTIRFRIL 409
>gi|225028741|ref|ZP_03717933.1| hypothetical protein EUBHAL_03020 [Eubacterium hallii DSM 3353]
gi|224953932|gb|EEG35141.1| hypothetical protein EUBHAL_03020 [Eubacterium hallii DSM 3353]
Length = 388
Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I I++ +I ++ + INI ++A + +D I ++ +
Sbjct: 319 RIAILHRNIPNMLTRFTGAFAKDNINITEM--SNKTKGDYAYAIFDVDSVITEESVQHII 376
Query: 85 VNVTIRFVKQFE 96
+ V+ +
Sbjct: 377 DIEGVLKVRVVK 388
>gi|156502121|ref|YP_001428186.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|290954513|ref|ZP_06559134.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
holarctica URFT1]
gi|295312029|ref|ZP_06802844.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
holarctica URFT1]
gi|156252724|gb|ABU61230.1| D-isomer specific 2-hydroxyacid dehydrogenase [Francisella
tularensis subsp. holarctica FTNF002-00]
Length = 411
Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ I ++ +I GI+ + IL IN+ +L ++ + + +
Sbjct: 325 VNFSELSLPSHRETHRILHIHQNIPGIINELNRILASKNINVEGQYLRTLENIGYVVMDI 384
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++++ +
Sbjct: 385 KSSSDEAKELIDEFKKVKATIKARYL 410
>gi|163793786|ref|ZP_02187760.1| D-3-phosphoglycerate dehydrogenase [alpha proteobacterium BAL199]
gi|159180897|gb|EDP65414.1| D-3-phosphoglycerate dehydrogenase [alpha proteobacterium BAL199]
Length = 414
Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 28/89 (31%), Gaps = 4/89 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V ++ G + + ++ + INIA H + + L
Sbjct: 326 VNFPQVQLPKGTTVTRFIQVQRNLPGELGKLNDLFARHRINIAAQHY--QTAGDIGYVVL 383
Query: 70 CIDGSILN--SVLEKLSVNVTIRFVKQFE 96
+G + +L ++ +
Sbjct: 384 DAEGEVPGAFDILTEIRALSGTIRARLLN 412
>gi|89256103|ref|YP_513465.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
holarctica LVS]
gi|167010789|ref|ZP_02275720.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
holarctica FSC200]
gi|254367428|ref|ZP_04983454.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
holarctica 257]
gi|89143934|emb|CAJ79153.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
holarctica LVS]
gi|134253244|gb|EBA52338.1| D-3-phosphoglycerate dehydrogenase [Francisella tularensis subsp.
holarctica 257]
Length = 411
Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ I ++ +I GI+ + IL IN+ +L ++ + + +
Sbjct: 325 VNFSELSLPSHRETHRILHIHQNIPGIINELNRILASKNINVEGQYLRTLENIGYVVMDI 384
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++++ +
Sbjct: 385 KSSSDEAKELIDEFKKVKATIKARYL 410
>gi|269219550|ref|ZP_06163404.1| D-3-phosphoglycerate dehydrogenase [Actinomyces sp. oral taxon 848
str. F0332]
gi|269210792|gb|EEZ77132.1| D-3-phosphoglycerate dehydrogenase [Actinomyces sp. oral taxon 848
str. F0332]
Length = 402
Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 25/84 (29%), Gaps = 5/84 (5%)
Query: 16 NFDVDIGR---LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
D + ++++ G + V +I NI L S E +
Sbjct: 319 EVDASPAPSARHRVTWIHSNTPGALAHVNSIFAAAHANIDAQTLVTS--GEIGYMVTDLA 376
Query: 73 GSILNSVLEKLSVNVTIRFVKQFE 96
+ S L +LS ++
Sbjct: 377 SELPESALTELSELDQSIRLRVLH 400
>gi|285018110|ref|YP_003375821.1| d-3-phosphoglycerate dehydrogenase [Xanthomonas albilineans GPE
PC73]
gi|283473328|emb|CBA15833.1| probable d-3-phosphoglycerate dehydrogenase protein [Xanthomonas
albilineans]
Length = 425
Score = 62.0 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 9/86 (10%), Positives = 30/86 (34%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ L + ++ ++ G++ V ++ + +NI L + + +
Sbjct: 339 VNFPEVTLPEHAESLRLLHIHRNVPGVLSQVNDLFSRHNVNIDGQFLRTDPKVGYVVIDI 398
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ E+L+ +
Sbjct: 399 AASVEQATALKEELARVAGTLRTRIL 424
>gi|160895241|ref|ZP_02076013.1| hypothetical protein CLOL250_02801 [Clostridium sp. L2-50]
gi|156863120|gb|EDO56551.1| hypothetical protein CLOL250_02801 [Clostridium sp. L2-50]
Length = 387
Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ +N V + I + +I ++ + + G N++ E+A S L
Sbjct: 304 VNYPNVNMGVCGDTARVTICHKNIPNMLTQFTGVFAKQGGNVSGMIS--QAKGEYAYSIL 361
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
ID + L + V+
Sbjct: 362 DIDKVPTEDDINALLAIDGVIKVRAI 387
>gi|294499178|ref|YP_003562878.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus megaterium QM
B1551]
gi|295704509|ref|YP_003597584.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus megaterium
DSM 319]
gi|294349115|gb|ADE69444.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus megaterium QM
B1551]
gi|294802168|gb|ADF39234.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus megaterium
DSM 319]
Length = 399
Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 7/90 (7%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + + + ++ +V + + Y +NIA E+A + +
Sbjct: 313 VNFPNASLPYTGKK-RVAAFHHNVPNMVGQLTQVFSNYNLNIADMV--NRSRGEYAYTMI 369
Query: 70 CIDGSILNSVL----EKLSVNVTIRFVKQF 95
ID + + ++ EK+ I +
Sbjct: 370 DIDNQVSDEIVPELEEKIGQIEGIITSRII 399
>gi|317129074|ref|YP_004095356.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Bacillus cellulosilyticus DSM 2522]
gi|315474022|gb|ADU30625.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Bacillus cellulosilyticus DSM 2522]
Length = 399
Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + R + + ++ +V + + + +Y +NIA E+A + +
Sbjct: 313 VNFPNASLPYTGKR-RVAAFHQNVPNMVGQITSAISDYSLNIADMV--NRSRGEYAYTMI 369
Query: 70 CIDGSILNS----VLEKLSVNVTIRFVKQF 95
ID + +++KLS I V+
Sbjct: 370 DIDNKVNGETIPGLIDKLSEIEGIVTVRVI 399
>gi|90020980|ref|YP_526807.1| D-3-phosphoglycerate dehydrogenase [Saccharophagus degradans 2-40]
gi|89950580|gb|ABD80595.1| D-3-phosphoglycerate dehydrogenase [Saccharophagus degradans 2-40]
Length = 390
Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 10/93 (10%), Positives = 27/93 (29%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + G I N ++ G++ V ++ +N+
Sbjct: 300 NGNIVNSVNFPHTVMARGEGGCRITFTNENVSGVLGNVLSVFAANNVNVIDMV--NKSRN 357
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + L + V+ L + ++
Sbjct: 358 DVAYNILDLAEKPSEDVIAALKAVEHVISLRVI 390
>gi|118588838|ref|ZP_01546246.1| D-3-phosphoglycerate dehydrogenase [Stappia aggregata IAM 12614]
gi|118438824|gb|EAV45457.1| D-3-phosphoglycerate dehydrogenase [Stappia aggregata IAM 12614]
Length = 414
Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 30/89 (33%), Gaps = 4/89 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + G + + ++ + +NI +L + L
Sbjct: 326 VSFPQVQLSKGTEATRFIQVHHNAPGAMRTLNDLFTRHNLNICAQYL--QSHLDIGYVVL 383
Query: 70 CIDGSILN--SVLEKLSVNVTIRFVKQFE 96
+D + + S+LE++ +
Sbjct: 384 DVDSPVEDPVSILEEIRSLPNTIRARLLN 412
>gi|300722098|ref|YP_003711380.1| D-3-phosphoglycerate dehydrogenase [Xenorhabdus nematophila ATCC
19061]
gi|297628597|emb|CBJ89171.1| D-3-phosphoglycerate dehydrogenase [Xenorhabdus nematophila ATCC
19061]
Length = 413
Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 30/88 (34%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDV-DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ E++ V D + ++ + GI+ + + + INI +L + +
Sbjct: 325 VNFPEVSLPVHDKDTNRLLHIHENRPGILTNINRVFTDQEINIEAQYLRTEGDIGYVVID 384
Query: 69 LCIDGSILNS-VLEKLSVNVTIRFVKQF 95
+ VL++L +
Sbjct: 385 ITTQNPAQAELVLQQLKAVPGTIRSRLL 412
>gi|229815676|ref|ZP_04446002.1| hypothetical protein COLINT_02726 [Collinsella intestinalis DSM
13280]
gi|229808740|gb|EEP44516.1| hypothetical protein COLINT_02726 [Collinsella intestinalis DSM
13280]
Length = 399
Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I ++A++ ++ + +L + N+ + E+A + D + + + L
Sbjct: 330 RIGCLHANVPNMIGQITAVLAKDNANVQRMV--NESAGENAYTMFDTDEHLDEATIAALR 387
Query: 85 VNVTIRFVKQFE 96
++ V+ +
Sbjct: 388 TIPSMYRVRVIK 399
>gi|254503338|ref|ZP_05115489.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain,
putative [Labrenzia alexandrii DFL-11]
gi|222439409|gb|EEE46088.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain,
putative [Labrenzia alexandrii DFL-11]
Length = 414
Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 8/89 (8%), Positives = 29/89 (32%), Gaps = 4/89 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + G + + ++ + +NI ++ + L
Sbjct: 326 VSFPQVQLPKGTEATRFIQVHHNAPGAMRTLNDLFTRHDLNIHAQYM--QSHLDIGYVVL 383
Query: 70 CIDGSILN--SVLEKLSVNVTIRFVKQFE 96
+D + + +LE++ +
Sbjct: 384 DVDSPVQDPVKILEEIRALPNTIRARLLN 412
>gi|118602632|ref|YP_903847.1| D-3-phosphoglycerate dehydrogenase [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
gi|118567571|gb|ABL02376.1| D-3-phosphoglycerate dehydrogenase [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
Length = 385
Score = 61.6 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 3/93 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + E + + I + +I +V + + + G NI
Sbjct: 296 NGNILNSVNFPEASMPRAGKE-RLAITHKNIPNMVGQISTTIADSGANIVDML--NKSKG 352
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ A + + ++ I SV L I V+
Sbjct: 353 DIAYTLVDLEHEISPSVFNNLKQVKDILTVRGL 385
>gi|209542284|ref|YP_002274513.1| D-3-phosphoglycerate dehydrogenase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209529961|gb|ACI49898.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Gluconacetobacter diazotrophicus PAl 5]
Length = 421
Score = 61.2 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 25/88 (28%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + V++++ GI++ + I NI +L + +
Sbjct: 330 VNFPTVQLPESPRGTRFMHVHSNVPGIMLQINEIFMSENSNITAQYLQTDGELGYVVVEA 389
Query: 70 CIDGSILNS--VLEKLSVNVTIRFVKQF 95
I +L +L +
Sbjct: 390 DTGRDIDKDNRILGRLRNLKGTIRARLL 417
>gi|281201293|gb|EFA75505.1| 3-phosphoglycerate dehydrogenase [Polysphondylium pallidum PN500]
Length = 453
Score = 61.2 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 28/86 (32%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI+ V I ++ + G++ + IL E N++ L +
Sbjct: 371 VNFPEISIPVSEETHRILNIHHNKPGVLRDINLILSE--FNVSSQILSTRKQIG--YIIA 426
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + K+S +
Sbjct: 427 DVDKEASKEIKRKISALPHSIKTRVL 452
>gi|149277179|ref|ZP_01883321.1| phosphoserine phosphatase and phosphoglycerate dehydrogenase
(D-3-phosphoglycerate dehydrogenase) fusion [Pedobacter
sp. BAL39]
gi|149232056|gb|EDM37433.1| phosphoserine phosphatase and phosphoglycerate dehydrogenase
(D-3-phosphoglycerate dehydrogenase) fusion [Pedobacter
sp. BAL39]
Length = 432
Score = 61.2 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 9/85 (10%), Positives = 26/85 (30%), Gaps = 2/85 (2%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+ + ++ ++ GI+ + + INI L + + + I+
Sbjct: 349 NFPNLQLPRIDKSHRLIHIHKNVPGIMAKINMAFAYHDINIVGQFLMTNPTIGYVIT--D 406
Query: 71 IDGSILNSVLEKLSVNVTIRFVKQF 95
I+ + + L +
Sbjct: 407 INTQYDKQLFKFLKKIEHTIKFRVL 431
>gi|83593791|ref|YP_427543.1| D-3-phosphoglycerate dehydrogenase [Rhodospirillum rubrum ATCC
11170]
gi|83576705|gb|ABC23256.1| D-3-phosphoglycerate dehydrogenase [Rhodospirillum rubrum ATCC
11170]
Length = 411
Score = 61.2 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 8/87 (9%), Positives = 27/87 (31%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ ++ ++ G++ + + + INI +L + + + +
Sbjct: 325 VNFPEVALPQQASVTRFLHIHRNVPGVMSALNEVFSSHHINIRGQYLMTNPRVGYVVVDV 384
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
D + L+ +
Sbjct: 385 EKDLKAGEGFRQALAAINGTLRFRFLN 411
>gi|219683272|ref|YP_002469655.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium animalis subsp.
lactis AD011]
gi|219620922|gb|ACL29079.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium animalis subsp.
lactis AD011]
gi|289177349|gb|ADC84595.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium animalis subsp.
lactis BB-12]
Length = 403
Score = 60.8 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I ++A++ G++ V +LGE INI+ LG E + ++ L
Sbjct: 333 RIAHLHANLPGVLAKVNQVLGEQDINISAQALGT--EGEIGYVVTDVTKCPDEVTIDALD 390
Query: 85 VNVTIRFVKQFE 96
+ E
Sbjct: 391 AITGTIRTRVIE 402
>gi|149199039|ref|ZP_01876079.1| SerA [Lentisphaera araneosa HTCC2155]
gi|149137828|gb|EDM26241.1| SerA [Lentisphaera araneosa HTCC2155]
Length = 522
Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Query: 3 SDGKPRFIKIQEIN-FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
++G +I + + + D G++ + IL INI +
Sbjct: 427 AEGNIIISRIDDFDKLYYAADGFSTVFIYNDRPGVLADITQILASESINIEDLRSPHNTE 486
Query: 62 TEHAISFLCIDGSILNSVLEKLSV 85
+ +I+ + + + N V+ K++
Sbjct: 487 KKRSIAIVKTNSEVSNEVINKINS 510
>gi|229100060|ref|ZP_04230970.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus Rock3-29]
gi|229107001|ref|ZP_04237099.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus Rock3-28]
gi|229119483|ref|ZP_04248778.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus Rock1-3]
gi|228663949|gb|EEL19495.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus Rock1-3]
gi|228676474|gb|EEL31222.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus Rock3-28]
gi|228683373|gb|EEL37341.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Bacillus
cereus Rock3-29]
Length = 211
Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 2/92 (2%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
GK +I N + + + N + + F+ ++ +Y INI H +
Sbjct: 122 GKILISEINGFNVKISENSPNLLVRNKNSCKFLAFITSLFNDYEINIIKIHCSSQKI--D 179
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
I + +D ++E++ N +
Sbjct: 180 NIMVIELDRLPSAKIIERIHSNPYVYTAIVIN 211
>gi|295099832|emb|CBK88921.1| hypothetical protein [Eubacterium cylindroides T2-87]
Length = 104
Score = 60.8 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + E D + + IC+++ +I ++ + + L +NI + L + A + L
Sbjct: 19 VNMPEAIMDFN-HKFRICVIHKNIPKMLTKITDTLSTENVNIEN--LLNKSRKDIAYTML 75
Query: 70 CIDGSILNSVLEKLSVNVTIRFV 92
+D + ++ K+ + V
Sbjct: 76 DLDHEASDDIINKIRQIDGVTRV 98
>gi|183221282|ref|YP_001839278.1| D-3-phosphoglycerate dehydrogenase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189911373|ref|YP_001962928.1| D-3-phosphoglycerate dehydrogenase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167776049|gb|ABZ94350.1| Dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167779704|gb|ABZ98002.1| D-3-phosphoglycerate dehydrogenase (PGDH) [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 407
Score = 60.4 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 10 IKIQEINF-DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ I + G I ++ + G + + +I+ + G NI +L S +
Sbjct: 322 VNFPNIELGSLKSGYHRILNIHQNQPGFLRDINSIISDMGGNILTQNLSTSTNIG--YLS 379
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ ID ++ + + +K+ + +
Sbjct: 380 MEIDKNLGDELKDKIKAHKHSIRTRIL 406
>gi|183602413|ref|ZP_02963779.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium animalis subsp.
lactis HN019]
gi|241191233|ref|YP_002968627.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241196639|ref|YP_002970194.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|183218332|gb|EDT88977.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium animalis subsp.
lactis HN019]
gi|240249625|gb|ACS46565.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240251193|gb|ACS48132.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|295794226|gb|ADG33761.1| D-3-phosphoglycerate dehydrogenase [Bifidobacterium animalis subsp.
lactis V9]
Length = 394
Score = 60.4 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I ++A++ G++ V +LGE INI+ LG E + ++ L
Sbjct: 324 RIAHLHANLPGVLAKVNQVLGEQDINISAQALGT--EGEIGYVVTDVTKCPDEVTIDALD 381
Query: 85 VNVTIRFVKQFE 96
+ E
Sbjct: 382 AITGTIRTRVIE 393
>gi|330994832|ref|ZP_08318754.1| D-3-phosphoglycerate dehydrogenase [Gluconacetobacter sp. SXCC-1]
gi|329758093|gb|EGG74615.1| D-3-phosphoglycerate dehydrogenase [Gluconacetobacter sp. SXCC-1]
Length = 421
Score = 60.4 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + V+ ++ GI++ + I N+ +L + + +
Sbjct: 330 VNFPTVQLPENPHGTRFMHVHRNVPGIMLQINEIFSSESCNVTAQYLQTAGELGYVVVEA 389
Query: 70 CI--DGSILNSVLEKLSVNVTIRFVKQF 95
D N +L++L +
Sbjct: 390 DTGRDVEKDNRILDRLRALKGTLRARLL 417
>gi|115377245|ref|ZP_01464456.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain,
putative [Stigmatella aurantiaca DW4/3-1]
gi|310818725|ref|YP_003951083.1| d-3-phosphoglycerate dehydrogenase [Stigmatella aurantiaca DW4/3-1]
gi|115365771|gb|EAU64795.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain,
putative [Stigmatella aurantiaca DW4/3-1]
gi|309391797|gb|ADO69256.1| D-3-phosphoglycerate dehydrogenase [Stigmatella aurantiaca DW4/3-1]
Length = 416
Score = 60.4 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + G I V+ ++ G++ + I+ + NI L S +
Sbjct: 332 VNFPQVEAPLIAGTHRILNVHRNVPGVLRDINRIVSDMNANIHAQVLSTDASIG--YLVM 389
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+D + V + ++ + +
Sbjct: 390 DLDQDVSAQVCDAIAGLNSDIKTRIVS 416
>gi|254369107|ref|ZP_04985119.1| phosphoglycerate dehydrogenase [Francisella tularensis subsp.
holarctica FSC022]
gi|157122057|gb|EDO66197.1| phosphoglycerate dehydrogenase [Francisella tularensis subsp.
holarctica FSC022]
Length = 414
Score = 60.1 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 29/86 (33%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E++ I ++ +I GI+ + IL IN+ +L ++ + + +
Sbjct: 328 VNFSELSLPSHRETHRILHIHQNIPGIINELNRILASKNINVEGQYLRTLENIGYVVMDI 387
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++++
Sbjct: 388 KSSSDEAKELIDEFKKVKATIKAHYL 413
>gi|317471343|ref|ZP_07930699.1| aspartate-semialdehyde dehydrogenase [Anaerostipes sp. 3_2_56FAA]
gi|316901178|gb|EFV23136.1| aspartate-semialdehyde dehydrogenase [Anaerostipes sp. 3_2_56FAA]
Length = 752
Score = 60.1 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 29/92 (31%), Gaps = 2/92 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I + + ++ ++ + + L E G NI + +
Sbjct: 297 GNIVNSVNYPNCDLGDIEAECRITVHHKNLPNMIGQLTSALAEEGYNIENML--NKSKKD 354
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+A S ++ VL K+ + K
Sbjct: 355 YAYSIFDVEKRPSEKVLSKIETDRWCHSFKSI 386
>gi|160903192|ref|YP_001568773.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Petrotoga mobilis SJ95]
gi|160360836|gb|ABX32450.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Petrotoga mobilis SJ95]
Length = 229
Score = 60.1 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 30/93 (32%), Gaps = 2/93 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I + + + G++ ++ N L G NI +
Sbjct: 127 GGGNIEITNINGTSVIFTAENPTLLFRYKEQKGMIAYISNALYSKGHNIDLMR--TIKED 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + ++ S+ + + E + T F K
Sbjct: 185 DEVLLIVELNESLDSELYESIQNGKTFLFSKYI 217
>gi|255994533|ref|ZP_05427668.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Eubacterium saphenum ATCC 49989]
gi|255993246|gb|EEU03335.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Eubacterium saphenum ATCC 49989]
Length = 388
Score = 60.1 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + I I+N+++ G++ + LG+ GIN+ + L
Sbjct: 297 NGNIVNSVNFPNCSLGEKDEAARISIINSNVSGMLSKITGALGDVGINVEN--LINKSKG 354
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A + L + + +++ I V+
Sbjct: 355 DYAYTLLEVKKDVDPEIIKSSLNFDNIISVRVIN 388
>gi|291531493|emb|CBK97078.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Eubacterium siraeum 70/3]
Length = 387
Score = 60.1 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + ++ + IC+++ ++ G++ + + E G+NI +
Sbjct: 298 NGNIVNSVNLPNVSMSMTGDAK-ICVIHKNVEGLIAKITTCITEAGMNIENMES--KSKK 354
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A + L + G+ +SV +K+ + V+ +
Sbjct: 355 DYAYTVLDVKGN-ADSVADKIRAGEAVISVRVIK 387
>gi|296116119|ref|ZP_06834737.1| D-3-phosphoglycerate dehydrogenase [Gluconacetobacter hansenii ATCC
23769]
gi|295977225|gb|EFG83985.1| D-3-phosphoglycerate dehydrogenase [Gluconacetobacter hansenii ATCC
23769]
Length = 421
Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 27/88 (30%), Gaps = 2/88 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + V+ + G+++ + I G N+ +L + + +
Sbjct: 330 VNFPTVQLPENPHGTRFMHVHTNAPGVMLQINEIFSREGCNVTAQYLQTAGELGYVVVEA 389
Query: 70 CI--DGSILNSVLEKLSVNVTIRFVKQF 95
D N +L KL +
Sbjct: 390 DTGRDVEKDNRILGKLRDLKGTIRARLL 417
>gi|148244726|ref|YP_001219420.1| D-3-phosphoglycerate dehydrogenase [Candidatus Vesicomyosocius
okutanii HA]
gi|146326553|dbj|BAF61696.1| D-3-phosphoglycerate dehydrogenase [Candidatus Vesicomyosocius
okutanii HA]
Length = 385
Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ G+ + I + +I +V + + + NI A + +
Sbjct: 303 VNFPEVLMP-RAGKNRLAITHKNIPNMVGQISTTIADTSANIIDML--NKSKNNIAYTLV 359
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++ I S+++ L I V+
Sbjct: 360 DLEHEIPVSIVDNLKQVKGILTVRGL 385
>gi|119718170|ref|YP_925135.1| D-3-phosphoglycerate dehydrogenase [Nocardioides sp. JS614]
gi|119538831|gb|ABL83448.1| D-3-phosphoglycerate dehydrogenase [Nocardioides sp. JS614]
Length = 397
Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
I ++ ++ G++ V ++L + N+ +L + + L K
Sbjct: 327 GHRIGFLHDNVPGVLASVNDLLADANANVTGQYLST--RGQQGYVVTDTLDPLPQDALAK 384
Query: 83 LSVNVTIRFVK 93
L+ +++
Sbjct: 385 LAEADHTIWLR 395
>gi|307945788|ref|ZP_07661124.1| D-3-phosphoglycerate dehydrogenase [Roseibium sp. TrichSKD4]
gi|307771661|gb|EFO30886.1| D-3-phosphoglycerate dehydrogenase [Roseibium sp. TrichSKD4]
Length = 433
Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 9/89 (10%), Positives = 29/89 (32%), Gaps = 4/89 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V+ + G + + ++ + +NI + Q + L
Sbjct: 345 VSFPQVQLPKGTDATRFIQVHHNAPGAMRTLNDLFTRHDLNIHAQFMQSHQDIGYV--VL 402
Query: 70 CIDGSILN--SVLEKLSVNVTIRFVKQFE 96
+D + + +LE++ +
Sbjct: 403 DVDSVVADPVQILEEIRALPNTIRARLLN 431
>gi|114568704|ref|YP_755384.1| D-3-phosphoglycerate dehydrogenase [Maricaulis maris MCS10]
gi|114339166|gb|ABI64446.1| D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein
[Maricaulis maris MCS10]
Length = 406
Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 10 IKIQEIN-FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ + EI V GR + +++ G + + + + G NIA HL E
Sbjct: 321 VNVPEIEPGQVKPGRTRLLSFHSNAPGFLSRLNDAVSASGANIAAQHL--ETRGELGYVA 378
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++G I + ++ + +
Sbjct: 379 ADLEGDIPSGFIDHVRALDGSIRARLVR 406
>gi|167750055|ref|ZP_02422182.1| hypothetical protein EUBSIR_01023 [Eubacterium siraeum DSM 15702]
gi|167656928|gb|EDS01058.1| hypothetical protein EUBSIR_01023 [Eubacterium siraeum DSM 15702]
Length = 387
Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + ++ + IC+++ ++ G++ + + E G+NI +
Sbjct: 298 NGNIVNSVNLPNVSMAMAGDAK-ICVIHKNVEGLIAKITTCITEAGMNIENMES--KSKK 354
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A + L + G+ +SV +K+ + V+ +
Sbjct: 355 DYAYTVLDVKGN-ADSVADKIRAGEAVISVRVIK 387
>gi|167771322|ref|ZP_02443375.1| hypothetical protein ANACOL_02680 [Anaerotruncus colihominis DSM
17241]
gi|167666573|gb|EDS10703.1| hypothetical protein ANACOL_02680 [Anaerotruncus colihominis DSM
17241]
Length = 388
Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 10/83 (12%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + ++ + +++ +I ++ + ++ + G+NI + L +A + +
Sbjct: 305 VNMPSVSMPRSGD-FRVALIHRNIPAMLTKISVLISDAGMNIEN--LTNKSRQNYAYTMI 361
Query: 70 CIDGSILNSVLEKLSVNVTIRFV 92
+ G+ + + KL + V
Sbjct: 362 DLKGAPTDELAAKLRAVEDVIRV 384
>gi|291556306|emb|CBL33423.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Eubacterium siraeum V10Sc8a]
Length = 387
Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + ++ + IC+++ ++ G++ + + E G+NI +
Sbjct: 298 NGNIVNSVNLPNVSMAMAGDAK-ICVIHKNVEGLIAKITTCITEAGMNIENMES--KSKK 354
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A + L + G+ +SV +K+ + V+ +
Sbjct: 355 DYAYTVLDVKGN-ADSVADKIRAGEAVISVRVIK 387
>gi|298528388|ref|ZP_07015792.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Desulfonatronospira thiodismutans ASO3-1]
gi|298512040|gb|EFI35942.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Desulfonatronospira thiodismutans ASO3-1]
Length = 394
Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + D I I I + D G+ G G+ G+NI + R A +
Sbjct: 312 VNVGQTVIDEGIDLYTIFITHEDKPGMFGKFGTAFGDLGVNIQENNSRRLD--GLAQTIY 369
Query: 70 CIDGSILNSVLEKLSVNVTIRFV 92
I + + EKL +R V
Sbjct: 370 TIQEKPTSEMQEKLLEIDGVRRV 392
>gi|330429319|gb|AEC20653.1| D-3-phosphoglycerate dehydrogenase [Pusillimonas sp. T7-7]
Length = 399
Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ EI + G I V+ ++ G + + N++ E+G+NI L +
Sbjct: 316 VNFPEIAYQEASGAARILHVHRNLPGAMGTLSNMMAEHGLNIVSQQL--QTRGQIGYVIS 373
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++G + ++V+ L +
Sbjct: 374 DVEGKVDDTVMSVLRAHPITVRCDVV 399
>gi|323339293|ref|ZP_08079583.1| D-isomer specific 2-hydroxyacid dehydrogenase [Lactobacillus
ruminis ATCC 25644]
gi|323093277|gb|EFZ35859.1| D-isomer specific 2-hydroxyacid dehydrogenase [Lactobacillus
ruminis ATCC 25644]
Length = 392
Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 32/96 (33%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + + L + +++ +I +V + IL INI + +
Sbjct: 297 GNIVNSVNFPTVEMPFE-APLRLTLIHQNIPNMVGRITTILANREINIDNMI--NRSRDK 353
Query: 64 HAISFLC---IDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + + + + ++L + V+
Sbjct: 354 IAYTVIDAAALSEEQVEELEKELMTIPEVIRVRALH 389
>gi|163854784|ref|YP_001629082.1| D-3-phosphoglycerate dehydrogenase [Bordetella petrii DSM 12804]
gi|163258512|emb|CAP40811.1| D-3-phosphoglycerate dehydrogenase [Bordetella petrii]
Length = 399
Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I V+ + G + + N+L E G+NI L + +DG + + V+ L
Sbjct: 331 RILHVHRNAPGALGALDNLLAEQGLNIVSQSL--QTRGQIGYVITDVDGEVSDIVMAALR 388
Query: 85 VNVTIRFVKQF 95
+
Sbjct: 389 SHPITVRCDLV 399
>gi|227514660|ref|ZP_03944709.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus fermentum ATCC
14931]
gi|227086969|gb|EEI22281.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus fermentum ATCC
14931]
Length = 391
Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 9/89 (10%), Positives = 32/89 (35%), Gaps = 6/89 (6%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + ++ + I++ +I ++ + + + +NI + L E+A + +
Sbjct: 301 VNLPDVVAPFT-SQHRFTIIHRNIPNMLGQISTAIAKAEVNIDN--LVNRAKGEYAYTMV 357
Query: 70 CIDG---SILNSVLEKLSVNVTIRFVKQF 95
+ + L+ + V+
Sbjct: 358 DVGELTAEQTEILTTTLNQIDAVSRVRLL 386
>gi|229005567|ref|ZP_04163277.1| D-3-phosphoglycerate dehydrogenase [Bacillus mycoides Rock1-4]
gi|228755667|gb|EEM05002.1| D-3-phosphoglycerate dehydrogenase [Bacillus mycoides Rock1-4]
Length = 390
Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 8/96 (8%)
Query: 5 GKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + + + I I++ ++ +V + L E+ INIA
Sbjct: 297 GNIRNSVNYPNVELPYVGKK-RITIMHQNVPNMVGQITGCLAEHHINIADMI--NRSKGS 353
Query: 64 HAISF----LCIDGSILNSVLEKLSVNVTIRFVKQF 95
A + ID I +V+E + + V+
Sbjct: 354 FAYTMIDIDNGIDDIIKENVVENIKKITGVVAVRMI 389
>gi|228998010|ref|ZP_04157611.1| D-3-phosphoglycerate dehydrogenase [Bacillus mycoides Rock3-17]
gi|228761743|gb|EEM10688.1| D-3-phosphoglycerate dehydrogenase [Bacillus mycoides Rock3-17]
Length = 390
Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 8/96 (8%)
Query: 5 GKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + + + I I++ ++ +V + L E+ INIA
Sbjct: 297 GNIRNSVNYPNVELPYVGKK-RITIMHQNVPNMVGQITGCLAEHHINIADMI--NRSKGS 353
Query: 64 HAISF----LCIDGSILNSVLEKLSVNVTIRFVKQF 95
A + ID I +V+E + + V+
Sbjct: 354 FAYTMIDIDNGIDDIIKENVVENIKKITGVVAVRMI 389
>gi|228991896|ref|ZP_04151832.1| D-3-phosphoglycerate dehydrogenase [Bacillus pseudomycoides DSM
12442]
gi|228767625|gb|EEM16252.1| D-3-phosphoglycerate dehydrogenase [Bacillus pseudomycoides DSM
12442]
Length = 390
Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 8/96 (8%)
Query: 5 GKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + + + I I++ ++ +V + L E+ INIA
Sbjct: 297 GNIRNSVNYPNVELPYVGKK-RITIMHQNVPNMVGQITGCLAEHHINIADMI--NRSKGS 353
Query: 64 HAISF----LCIDGSILNSVLEKLSVNVTIRFVKQF 95
A + ID I +V+E + + V+
Sbjct: 354 FAYTMIDIDNGIDDIIKENVVENIKKITGVVAVRMI 389
>gi|162452429|ref|YP_001614796.1| D-3-phosphoglycerate dehydrogenase [Sorangium cellulosum 'So ce
56']
gi|161163011|emb|CAN94316.1| Phosphoglycerate dehydrogenase [Sorangium cellulosum 'So ce 56']
Length = 419
Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 26/86 (30%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + I V+ ++ G++ V I+ + NI L + +
Sbjct: 335 VNFPNVELPPLKATHRILNVHRNVPGVLRDVNRIVSDVNANIDSQVLSTDANIG--YLIM 392
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + V ++ T +
Sbjct: 393 DLSQDVSAEVSRRIGALETSIRTRVL 418
>gi|319652196|ref|ZP_08006315.1| hypothetical protein HMPREF1013_02928 [Bacillus sp. 2_A_57_CT2]
gi|317396185|gb|EFV76904.1| hypothetical protein HMPREF1013_02928 [Bacillus sp. 2_A_57_CT2]
Length = 396
Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 7/90 (7%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ R + + +I +V + + Y +NIA E+A + +
Sbjct: 310 VNFPNAALPYTGKR-RVTAFHKNIPNMVGQITLAISSYQLNIADMV--NRSRGEYAYTMI 366
Query: 70 CIDGSILNSV----LEKLSVNVTIRFVKQF 95
ID + V LE+++ I +
Sbjct: 367 DIDNKVNGDVIPGLLEQINQIEGIIKSRII 396
>gi|184155245|ref|YP_001843585.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus fermentum IFO
3956]
gi|183226589|dbj|BAG27105.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus fermentum IFO
3956]
Length = 391
Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 9/89 (10%), Positives = 32/89 (35%), Gaps = 6/89 (6%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + ++ + I++ +I ++ + + + +NI + L E+A + +
Sbjct: 301 VNLPDVVAPFT-SQHRFTIIHRNIPNMLGQISTAIAKAEVNIDN--LVNRAKGEYAYTMV 357
Query: 70 CIDG---SILNSVLEKLSVNVTIRFVKQF 95
+ + L+ + V+
Sbjct: 358 DVGELTAEQTEILTTTLNQIDAVSRVRLL 386
>gi|237834647|ref|XP_002366621.1| D-3-phosphoglycerate dehydrogenase, putative [Toxoplasma gondii
ME49]
gi|211964285|gb|EEA99480.1| D-3-phosphoglycerate dehydrogenase, putative [Toxoplasma gondii
ME49]
gi|221486089|gb|EEE24359.1| D-3-phosphoglycerate dehydrogenase, putative [Toxoplasma gondii
GT1]
gi|221503586|gb|EEE29277.1| D-3-phosphoglycerate dehydrogenase, putative [Toxoplasma gondii
VEG]
Length = 604
Score = 58.1 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 31/81 (38%), Gaps = 9/81 (11%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRS---------QSTEHAISFLCIDGS 74
M+ +++D G + V L INIA+ HLGR T + D
Sbjct: 513 YMMYTIHSDTSGTLATVAQKLAGANINIANCHLGRRLVDDPSAPEGKTMMGLCIFHADSE 572
Query: 75 ILNSVLEKLSVNVTIRFVKQF 95
I + V+ + ++ K F
Sbjct: 573 IPDEVVTTIRQLHNVKECKVF 593
>gi|229085936|ref|ZP_04218160.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus Rock3-44]
gi|228697372|gb|EEL50133.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus Rock3-44]
Length = 390
Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 8/96 (8%)
Query: 5 GKPR-FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + + + I I++ ++ +V + L E+ INIA
Sbjct: 297 GNIRNSVNYPNVELPYVGKK-RITIMHQNVPNMVGQITGCLAEHHINIADMI--NRSKGS 353
Query: 64 HAISF----LCIDGSILNSVLEKLSVNVTIRFVKQF 95
A + ID I +V+E + + V+
Sbjct: 354 FAYTMIDIDNGIDDIIKENVVENIKEITGVVAVRMI 389
>gi|312866284|ref|ZP_07726502.1| 4-phosphoerythronate dehydrogenase [Streptococcus downei F0415]
gi|311097978|gb|EFQ56204.1| 4-phosphoerythronate dehydrogenase [Streptococcus downei F0415]
Length = 393
Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG---SILNS 78
I ++N ++ IV + + E INIA+ ++A + L +D +++
Sbjct: 315 APYRITLINRNVPNIVARISTAVSEANINIANIL--NRSKGDYAYTLLDLDETDKDKIDA 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++ + I V+ +
Sbjct: 373 LVAAFEASENIIKVRLIQ 390
>gi|297620302|ref|YP_003708439.1| D-3-phosphoglycerate dehydrogenase [Waddlia chondrophila WSU
86-1044]
gi|297375603|gb|ADI37433.1| D-3-phosphoglycerate dehydrogenase [Waddlia chondrophila WSU
86-1044]
Length = 407
Score = 58.1 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ I ++ + G++ + + GIN+ +L + + L
Sbjct: 323 VNFPSLSLPKHQKTHRILNIHKNAPGMIREINAAVAGEGINVQSQYLLTNMEIGYV--VL 380
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I+ ++ + + EK+ +
Sbjct: 381 DIEKAVSSRLKEKIQQLEGSIRTRIL 406
>gi|326204753|ref|ZP_08194608.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Clostridium papyrosolvens DSM 2782]
gi|325985124|gb|EGD45965.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Clostridium papyrosolvens DSM 2782]
Length = 392
Score = 57.7 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 25/72 (34%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I I + +I ++ +NI ++A + L I+ V+ ++
Sbjct: 323 RIAICHRNIPNMLAQFAGAFSSMNVNILDMVS--KSRGDYAYTVLDIENQTNEEVVAMIA 380
Query: 85 VNVTIRFVKQFE 96
+ V+ +
Sbjct: 381 AIKGVLKVRIVK 392
>gi|84496270|ref|ZP_00995124.1| D-3-phosphoglycerate dehydrogenase [Janibacter sp. HTCC2649]
gi|84383038|gb|EAP98919.1| D-3-phosphoglycerate dehydrogenase [Janibacter sp. HTCC2649]
Length = 399
Score = 57.4 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 28/84 (33%), Gaps = 2/84 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + E+ + ++ ++ G++ + E G+N+ L E
Sbjct: 314 VNLPEVAAPSVDAPFRLGYLHHNVPGVLASINQTFAEAGVNVTGQSLST--RGELGYVVT 371
Query: 70 CIDGSILNSVLEKLSVNVTIRFVK 93
D L+ LS +++
Sbjct: 372 DTDVLPSEQTLDGLSQLDHTVWLR 395
>gi|149919344|ref|ZP_01907826.1| NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
[Plesiocystis pacifica SIR-1]
gi|149819844|gb|EDM79268.1| NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
[Plesiocystis pacifica SIR-1]
Length = 399
Score = 57.4 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFH-LGRSQSTEHAISF 68
+ + + R + + + D +G++ + + L ++ +N+ H + + A +
Sbjct: 314 VNLDDHG----PARHTLVVRHHDRVGVLASILDALRKHQLNVQDMHNVVFKGAEGAASAT 369
Query: 69 LCIDGSILNSVLEKLSVNVTIRFV 92
+ ++ +L+ + + + V
Sbjct: 370 IAVENEPSADLLDDIRAHADVLGV 393
>gi|225016424|ref|ZP_03705616.1| hypothetical protein CLOSTMETH_00327 [Clostridium methylpentosum
DSM 5476]
gi|224950809|gb|EEG32018.1| hypothetical protein CLOSTMETH_00327 [Clostridium methylpentosum
DSM 5476]
Length = 387
Score = 57.4 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
G ICI++ + ++ + I+ + G+NI + +A + L +DG+ N
Sbjct: 316 GDTRICIIHRNEKSMLSQISGIISDCGLNIENMM--NKSRGGYAYTILDVDGN-GNIAEP 372
Query: 82 KLSVNVTIRFVKQFE 96
KLS V+ +
Sbjct: 373 KLSELEGTINVRTIK 387
>gi|299783135|gb|ADJ41133.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus fermentum CECT
5716]
Length = 109
Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 9/89 (10%), Positives = 32/89 (35%), Gaps = 6/89 (6%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + ++ + I++ +I ++ + + + +NI + L E+A + +
Sbjct: 19 VNLPDVVAPFT-SQHRFTIIHRNIPNMLGQISTAIAKAEVNIDN--LVNRAKGEYAYTMV 75
Query: 70 CIDG---SILNSVLEKLSVNVTIRFVKQF 95
+ + L+ + V+
Sbjct: 76 DVGELTAEQTEILTTTLNQIDAVSRVRLL 104
>gi|227501755|ref|ZP_03931804.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium accolens ATCC
49725]
gi|227077780|gb|EEI15743.1| D-3-phosphoglycerate dehydrogenase [Corynebacterium accolens ATCC
49725]
Length = 528
Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 39/82 (47%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG +F++I D+ + AD G + VG LG GINI L + +
Sbjct: 434 DGTEKFVRINGRGVDMRAEGRNLFFRYADAPGALGTVGTKLGAAGINIIAAALTQGKQES 493
Query: 64 HAISFLCIDGSILNSVLEKLSV 85
A+ L ++ + +S++E+++
Sbjct: 494 DAVLILRVESEVPDSLIEEINS 515
>gi|228925045|ref|ZP_04088174.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228834622|gb|EEM80132.1| L-serine dehydratase, beta chain [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 211
Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
GK +I NF++ I + N + + F+ ++ +Y INI + +
Sbjct: 122 GKILISEINGFNFNISENNPTILVRNKNSCKFLAFITSLCSDYEINIIKIQSSSQKI--N 179
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
I + +D V+E+++ N +
Sbjct: 180 NIMIIELDKLPSLKVIERVNNNPYVYKTIIIN 211
>gi|90961080|ref|YP_534996.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus salivarius
UCC118]
gi|90820274|gb|ABD98913.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus salivarius
UCC118]
Length = 394
Score = 57.0 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 34/96 (35%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + + D L + +++ ++ +V + IL + INI + +
Sbjct: 296 GDIVNSVNLPNVEMAFD-APLRLTLIHQNVPNMVGRITTILAKEEINIDNMI--NRSRGK 352
Query: 64 HAISFL---CIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + I L + ++L + V+
Sbjct: 353 IAYTMIDAADISEGKLKELKKELLEIPEVIRVRALH 388
>gi|325848594|ref|ZP_08170210.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480675|gb|EGC83733.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 221
Score = 57.0 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 34/94 (36%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I+I ++ + I + + G++ V +L NI +S
Sbjct: 127 GGGNIEIIEINDVAISYNGKFPTIILRYREQKGVIYKVSKLLATNDYNIESMK--TVKSD 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ + ++ + S++E++ + + E
Sbjct: 185 DEVTLIVELNEKLEKSIIEQIINDDRYDYANYIE 218
>gi|227892386|ref|ZP_04010191.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus salivarius ATCC
11741]
gi|227865793|gb|EEJ73214.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus salivarius ATCC
11741]
Length = 394
Score = 57.0 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 34/96 (35%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + + D L + +++ ++ +V + IL + INI + +
Sbjct: 296 GDIVNSVNLPNVEMAFD-APLRLTLIHQNVPNMVGRITTILAKEEINIDNMI--NRSRGK 352
Query: 64 HAISFL---CIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + I L + ++L + V+
Sbjct: 353 IAYTMIDAADISEEKLKELKKELLEIPEVIRVRALH 388
>gi|290985750|ref|XP_002675588.1| D-3-phosphoglycerate dehydrogenase [Naegleria gruberi]
gi|284089185|gb|EFC42844.1| D-3-phosphoglycerate dehydrogenase [Naegleria gruberi]
Length = 405
Score = 57.0 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ +IN G + ++ + G++ + +L +Y N+ LG ++ +
Sbjct: 323 VNFPQINPVHYAGCHRLLHIHVNRHGVLKSINALLQDY--NVVSQLLGTTKHIG--YMVI 378
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D S+ V +++ + +
Sbjct: 379 ELDKSVAEEVFKQIKELESTIKARVL 404
>gi|306835934|ref|ZP_07468927.1| phosphoglycerate dehydrogenase [Corynebacterium accolens ATCC
49726]
gi|304568208|gb|EFM43780.1| phosphoglycerate dehydrogenase [Corynebacterium accolens ATCC
49726]
Length = 528
Score = 57.0 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 39/82 (47%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
DG +F++I D+ + AD G + VG LG GINI L + +
Sbjct: 434 DGTEKFVRINGRGVDMRAEGRNLFFRYADAPGALGTVGTKLGAAGINIIAAALTQGKQET 493
Query: 64 HAISFLCIDGSILNSVLEKLSV 85
A+ L ++ + +S++E+++
Sbjct: 494 DAVLILRVESEVPDSLIEEINS 515
>gi|167562218|ref|ZP_02355134.1| D-3-phosphoglycerate dehydrogenase [Burkholderia oklahomensis
EO147]
Length = 401
Score = 57.0 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ V+ + G++ + +L + G NI HL + +D ++ L+KL
Sbjct: 330 RLLNVHGNTPGVLAVLNTLLAQDGANIVAQHL--QTRGDIGYVVTDLDRVPSDAFLDKLR 387
Query: 85 VNVTIRFVKQFE 96
+ +
Sbjct: 388 SDRAFTRSRLLR 399
>gi|167569464|ref|ZP_02362338.1| D-3-phosphoglycerate dehydrogenase [Burkholderia oklahomensis
C6786]
Length = 401
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ V+ + G++ + +L + G NI HL + +D ++ L+KL
Sbjct: 330 RLLNVHGNTPGVLAVLNTLLAQDGANIVAQHL--QTRGDIGYVVTDLDRVPSDAFLDKLR 387
Query: 85 VNVTIRFVKQFE 96
+ +
Sbjct: 388 SDRAFTRSRLLR 399
>gi|150020237|ref|YP_001305591.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermosipho melanesiensis BI429]
gi|149792758|gb|ABR30206.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Thermosipho melanesiensis BI429]
Length = 216
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 6/91 (6%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR-SQS 61
G I + ++ + IVN D+ + + + +N+A+ +L R +
Sbjct: 123 GGGNILITSIDSVPCNLSWDFDTLVIVNKDVPKALEKILETI---KVNVANLYLRRINAL 179
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E A++ + +D I L ++ +
Sbjct: 180 LERALTIIELDEPI--ENLAEIKKLSWVYEC 208
>gi|212697164|ref|ZP_03305292.1| hypothetical protein ANHYDRO_01730 [Anaerococcus hydrogenalis DSM
7454]
gi|212675939|gb|EEB35546.1| hypothetical protein ANHYDRO_01730 [Anaerococcus hydrogenalis DSM
7454]
Length = 260
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 34/94 (36%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I+I ++ + I + + G++ V +L NI +S
Sbjct: 166 GGGNIEIIEINDVTISYNGKFPTIILRYREQKGVIYKVSKLLATNDYNIESMK--TVKSD 223
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ + ++ + S++E++ + + E
Sbjct: 224 DEVTLIVELNEKLEKSIIEQIINDDRYDYANYIE 257
>gi|229116724|ref|ZP_04246108.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus Rock1-3]
gi|228666556|gb|EEL22014.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus Rock1-3]
Length = 390
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +V+E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENVVENISKISGVVAVRMI 389
>gi|42524297|ref|NP_969677.1| D-3-phosphoglycerate dehydrogenase [Bdellovibrio bacteriovorus
HD100]
gi|39576506|emb|CAE80670.1| D-3-phosphoglycerate dehydrogenase [Bdellovibrio bacteriovorus
HD100]
Length = 401
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V G I V+ + G++ + ++ + G NI +L + +
Sbjct: 317 VNFPNVDLPVKQGTSRILNVHRNEPGVLGEINGLISKAGANIEGQYLSTDEKIG--YLVM 374
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+ S +++ + +
Sbjct: 375 DLHSSQAHTLAADIEKLSRSIRTRVV 400
>gi|163816829|ref|ZP_02208192.1| hypothetical protein COPEUT_03019 [Coprococcus eutactus ATCC 27759]
gi|158448086|gb|EDP25081.1| hypothetical protein COPEUT_03019 [Coprococcus eutactus ATCC 27759]
Length = 403
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ I + +I ++ + + G N++ ++A S L I + +LS
Sbjct: 334 RVTICHKNIPNMLTQFTGVFAKKGGNVSGMIS--KAKGDYAYSILDIGVEPTADDIAELS 391
Query: 85 VNVTIRFVKQFE 96
+ V+ +
Sbjct: 392 AIEGVVKVRVIK 403
>gi|288957891|ref|YP_003448232.1| D-3-phosphoglycerate dehydrogenase [Azospirillum sp. B510]
gi|288910199|dbj|BAI71688.1| D-3-phosphoglycerate dehydrogenase [Azospirillum sp. B510]
Length = 414
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 26/86 (30%), Gaps = 1/86 (1%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ V G V+ + G++ V + +NIA +L + + +
Sbjct: 325 VNFPQVALPVQAGCTRFLHVHENRPGMLRKVNEVFSGRDLNIAAQYLQTDPELGYVVVDV 384
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
D V L +
Sbjct: 385 DGDVE-ELEVTNDLRAIEGTLKARFL 409
>gi|311103711|ref|YP_003976564.1| D-3-phosphoglycerate dehydrogenase 2 [Achromobacter xylosoxidans
A8]
gi|310758400|gb|ADP13849.1| D-3-phosphoglycerate dehydrogenase 2 [Achromobacter xylosoxidans
A8]
Length = 399
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + G I V+ + G + + N++ ++G+NI L +
Sbjct: 316 VNFPELPYLEPAGGTRILHVHRNAPGALGTLDNLMAQHGLNIVSQTL--QTRGQIGYVIT 373
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++G + + V+ L + +
Sbjct: 374 DVEGEVNDIVMTTLRDHPITVRCDRL 399
>gi|317154068|ref|YP_004122116.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Desulfovibrio aespoeensis Aspo-2]
gi|316944319|gb|ADU63370.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Desulfovibrio aespoeensis Aspo-2]
Length = 394
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ + D + I I + D G+ G ++GE G+NI + R + +
Sbjct: 312 VNV-GQTVDDEGSDVYTIFITHEDTPGMFGKFGTVMGEMGVNIRENNSRR--LGDQVQTV 368
Query: 69 LCIDGSILNSVLEKLSVNVTIRFV 92
+ ++V E L+ + V
Sbjct: 369 YIVHTQPGDAVREALTAIKGVSRV 392
>gi|229097715|ref|ZP_04228670.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus Rock3-29]
gi|228685660|gb|EEL39583.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus Rock3-29]
Length = 390
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +V+E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENVVENISKISGVVAVRMI 389
>gi|328956758|ref|YP_004374144.1| D-3-phosphoglycerate dehydrogenase [Carnobacterium sp. 17-4]
gi|328673082|gb|AEB29128.1| D-3-phosphoglycerate dehydrogenase [Carnobacterium sp. 17-4]
Length = 393
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 39/97 (40%), Gaps = 8/97 (8%)
Query: 4 DGKPRFIKIQEINFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + ++ + + ++N ++ +V + L EY +NI +
Sbjct: 296 GNIVHSVNFP--SVEMVLNSPIRLAVINRNVTNMVAQMSIGLAEYEVNIVNIM--NKSRG 351
Query: 63 EHAISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
++A + + ++ L +++K+S I V+ +
Sbjct: 352 DYAYTLIDVESISEDKLKEIVKKISSVEGILSVRIIK 388
>gi|269795593|ref|YP_003315048.1| D-3-phosphoglycerate dehydrogenase [Sanguibacter keddieii DSM
10542]
gi|269097778|gb|ACZ22214.1| D-3-phosphoglycerate dehydrogenase [Sanguibacter keddieii DSM
10542]
Length = 403
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 30/87 (34%), Gaps = 2/87 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + + G + ++ + G++ V L E+G NI L E
Sbjct: 315 VNLPNLALESSTGVARVAHLHRNTPGVLAEVNRTLAEHGTNIEGQLLAT--RGEVGYVVT 372
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ +V+E L ++
Sbjct: 373 DAGSTVEAAVVEALQAMGQTIKLRVLT 399
>gi|229103779|ref|ZP_04234459.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus Rock3-28]
gi|228679655|gb|EEL33852.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus Rock3-28]
Length = 390
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +V+E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENVVENISKISGVVAVRMI 389
>gi|317404472|gb|EFV84883.1| D-3-phosphoglycerate dehydrogenase [Achromobacter xylosoxidans C54]
Length = 399
Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
G I V+ + G + + N++ ++G+NI L + +DG + + V+
Sbjct: 328 GATRILHVHRNAPGALGTLDNLMAQHGLNIVSQTL--QTKGQIGYVITDVDGEVDDLVMT 385
Query: 82 KLSVNVTIRFVKQF 95
L + +
Sbjct: 386 TLRDHPITVRCDRL 399
>gi|295093376|emb|CBK82467.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Coprococcus sp. ART55/1]
Length = 388
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ I + +I ++ + + G N++ ++A S L I + +LS
Sbjct: 319 RVTICHKNIPNMLTQFTGVFSKKGGNVSGMIS--KAKGDYAYSILDIGVEPTADDIAELS 376
Query: 85 VNVTIRFVKQFE 96
+ V+ +
Sbjct: 377 AIEGVVKVRVIK 388
>gi|229197376|ref|ZP_04324103.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus m1293]
gi|228586000|gb|EEK44091.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus m1293]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|206974660|ref|ZP_03235576.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus
H3081.97]
gi|217960677|ref|YP_002339241.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus AH187]
gi|229139880|ref|ZP_04268445.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus BDRD-ST26]
gi|206747303|gb|EDZ58694.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus
H3081.97]
gi|217066676|gb|ACJ80926.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus AH187]
gi|228643545|gb|EEK99811.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus BDRD-ST26]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|229092221|ref|ZP_04223402.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus Rock3-42]
gi|228691212|gb|EEL44976.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus Rock3-42]
Length = 392
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 299 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 357
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 358 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 391
>gi|222096734|ref|YP_002530791.1| d-3-phosphoglycerate dehydrogenase, putative [Bacillus cereus Q1]
gi|221240792|gb|ACM13502.1| D-3-phosphoglycerate dehydrogenase, putative [Bacillus cereus Q1]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|228986348|ref|ZP_04146485.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228773375|gb|EEM21804.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|229156877|ref|ZP_04284958.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus ATCC 4342]
gi|228626367|gb|EEK83113.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus ATCC 4342]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|228921988|ref|ZP_04085299.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228837596|gb|EEM82926.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|49480110|ref|YP_037345.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|300118393|ref|ZP_07056139.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus SJ1]
gi|49331666|gb|AAT62312.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|298724178|gb|EFI64874.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus SJ1]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|229012468|ref|ZP_04169643.1| D-isomer specific 2-hydroxyacid dehydrogenase [Bacillus mycoides
DSM 2048]
gi|228748827|gb|EEL98677.1| D-isomer specific 2-hydroxyacid dehydrogenase [Bacillus mycoides
DSM 2048]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID + +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIMKENIVENISKITGVVAVRMI 389
>gi|47564398|ref|ZP_00235443.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Bacillus cereus G9241]
gi|47558550|gb|EAL16873.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Bacillus cereus G9241]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|301054762|ref|YP_003792973.1| putative D-3-phosphoglycerate dehydrogenase ACT domain-containing
protein [Bacillus anthracis CI]
gi|300376931|gb|ADK05835.1| putative D-3-phosphoglycerate dehydrogenase ACT domain protein
[Bacillus cereus biovar anthracis str. CI]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|229173910|ref|ZP_04301448.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus MM3]
gi|228609548|gb|EEK66832.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus MM3]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAISFLCIDGSIL--NSVLEKLSVNVTIRFVKQF 95
+ + + + +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIRENIVENISKITGVVAVRMI 389
>gi|323698530|ref|ZP_08110442.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Desulfovibrio sp. ND132]
gi|323458462|gb|EGB14327.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Desulfovibrio desulfuricans ND132]
Length = 394
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I I + D G+ G ++GE G+NI + + E + + V E L+
Sbjct: 327 TIFITHEDKPGMFGKFGTLMGEMGVNIRENNS--RKLGEQVQTVYMVHARPTEEVREALN 384
Query: 85 VNVTIRFV 92
+ V
Sbjct: 385 RIEGVNRV 392
>gi|229073168|ref|ZP_04206328.1| L-serine dehydratase, beta chain [Bacillus cereus F65185]
gi|228709940|gb|EEL61954.1| L-serine dehydratase, beta chain [Bacillus cereus F65185]
Length = 206
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Query: 5 GKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
G +I NF++ I + N + + F+ ++ +Y INI + +
Sbjct: 117 GTLLISEINGFNFNISENNPTILVRNKNSCKFLAFITSLCSDYEINIIKIQSSPQKI--N 174
Query: 65 AISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
I + +D V+E+++ N +
Sbjct: 175 NIMVIELDKLPSLKVIERINNNPYVYKTIIIN 206
>gi|225865243|ref|YP_002750621.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus
03BB102]
gi|225788755|gb|ACO28972.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus
03BB102]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|30021357|ref|NP_832988.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus ATCC 14579]
gi|229128528|ref|ZP_04257506.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus BDRD-Cer4]
gi|29896911|gb|AAP10189.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus ATCC 14579]
gi|228654721|gb|EEL10581.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus BDRD-Cer4]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMTNRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|163940915|ref|YP_001645799.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Bacillus
weihenstephanensis KBAB4]
gi|163863112|gb|ABY44171.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [Bacillus
weihenstephanensis KBAB4]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID + +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIMKENIVENISKITGVVAVRMI 389
>gi|256545320|ref|ZP_05472684.1| L-serine dehydratase, beta chain (L-serine deaminase) [Anaerococcus
vaginalis ATCC 51170]
gi|256399001|gb|EEU12614.1| L-serine dehydratase, beta chain (L-serine deaminase) [Anaerococcus
vaginalis ATCC 51170]
Length = 221
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 34/94 (36%), Gaps = 2/94 (2%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I+I +++ + I + + G++ V +L NI ++
Sbjct: 127 GGGNIEIIEINDVSISYNGKFPTIILRYKEQKGVIYEVSKLLATNDYNIESMK--TVKAD 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ + ++ + +++++ N + E
Sbjct: 185 DEVTLIVELNEKLEVEIIDEIINNKRYDYANYIE 218
>gi|30263231|ref|NP_845608.1| D-3-phosphoglycerate dehydrogenase, putative [Bacillus anthracis
str. Ames]
gi|47528605|ref|YP_019954.1| D-3-phosphoglycerate dehydrogenase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186083|ref|YP_029335.1| D-3-phosphoglycerate dehydrogenase [Bacillus anthracis str. Sterne]
gi|65320562|ref|ZP_00393521.1| COG0111: Phosphoglycerate dehydrogenase and related dehydrogenases
[Bacillus anthracis str. A2012]
gi|118478568|ref|YP_895719.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis str. Al
Hakam]
gi|165868676|ref|ZP_02213336.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. A0488]
gi|167632620|ref|ZP_02390947.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. A0442]
gi|167637235|ref|ZP_02395515.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. A0193]
gi|170684927|ref|ZP_02876152.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. A0465]
gi|170704934|ref|ZP_02895399.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. A0389]
gi|177649837|ref|ZP_02932838.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. A0174]
gi|190565107|ref|ZP_03018028.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
Tsiankovskii-I]
gi|196032031|ref|ZP_03099445.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus W]
gi|196042631|ref|ZP_03109870.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus
03BB108]
gi|218904414|ref|YP_002452248.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus AH820]
gi|227813899|ref|YP_002813908.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. CDC 684]
gi|228915876|ref|ZP_04079451.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228928330|ref|ZP_04091371.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228934536|ref|ZP_04097371.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229122808|ref|ZP_04252017.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus 95/8201]
gi|229185508|ref|ZP_04312688.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus BGSC 6E1]
gi|229601352|ref|YP_002867492.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. A0248]
gi|254685843|ref|ZP_05149702.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. CNEVA-9066]
gi|254723250|ref|ZP_05185038.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. A1055]
gi|254738315|ref|ZP_05196018.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. Western North America USA6153]
gi|254742519|ref|ZP_05200204.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. Kruger B]
gi|254752631|ref|ZP_05204667.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. Vollum]
gi|254761146|ref|ZP_05213170.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. Australia 94]
gi|30257865|gb|AAP27094.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. Ames]
gi|47503753|gb|AAT32429.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. 'Ames Ancestor']
gi|49180010|gb|AAT55386.1| D-3-phosphoglycerate dehydrogenase, putative [Bacillus anthracis
str. Sterne]
gi|118417793|gb|ABK86212.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis str. Al
Hakam]
gi|164715402|gb|EDR20919.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. A0488]
gi|167514742|gb|EDR90108.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. A0193]
gi|167532918|gb|EDR95554.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. A0442]
gi|170129789|gb|EDS98651.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. A0389]
gi|170671187|gb|EDT21925.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. A0465]
gi|172083789|gb|EDT68848.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. A0174]
gi|190564424|gb|EDV18388.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
Tsiankovskii-I]
gi|195994782|gb|EDX58736.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus W]
gi|196026115|gb|EDX64783.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus
03BB108]
gi|218537998|gb|ACK90396.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus AH820]
gi|227003264|gb|ACP13007.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. CDC 684]
gi|228597903|gb|EEK55543.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus BGSC 6E1]
gi|228660672|gb|EEL16303.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus 95/8201]
gi|228825173|gb|EEM70970.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228831377|gb|EEM76973.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228843694|gb|EEM88768.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229265760|gb|ACQ47397.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus anthracis
str. A0248]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|324327192|gb|ADY22452.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|42782337|ref|NP_979584.1| D-3-phosphoglycerate dehydrogenase, putative [Bacillus cereus ATCC
10987]
gi|42738262|gb|AAS42192.1| D-3-phosphoglycerate dehydrogenase, putative [Bacillus cereus ATCC
10987]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|229167905|ref|ZP_04295636.1| D-isomer specific 2-hydroxyacid dehydrogenase [Bacillus cereus
AH621]
gi|228615545|gb|EEK72639.1| D-isomer specific 2-hydroxyacid dehydrogenase [Bacillus cereus
AH621]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|228946898|ref|ZP_04109196.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228812768|gb|EEM59091.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|52142274|ref|YP_084555.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus E33L]
gi|51975743|gb|AAU17293.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus E33L]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|229134088|ref|ZP_04262908.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus BDRD-ST196]
gi|228649423|gb|EEL05438.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus BDRD-ST196]
Length = 390
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID + +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIMKENIVENISKITGVVAVRMI 389
>gi|163789783|ref|ZP_02184220.1| hypothetical protein CAT7_06111 [Carnobacterium sp. AT7]
gi|159875005|gb|EDP69072.1| hypothetical protein CAT7_06111 [Carnobacterium sp. AT7]
Length = 393
Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 11/97 (11%), Positives = 36/97 (37%), Gaps = 8/97 (8%)
Query: 4 DGKPRFIKIQEINFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ ++ + + ++N ++ +V + L EY +NI +
Sbjct: 296 GNIVHSVNFP--TVEMALNSPLRLAVINRNVTNMVAQMSIGLAEYSVNIVNIM--NKSRG 351
Query: 63 EHAISFLCIDGSILNS---VLEKLSVNVTIRFVKQFE 96
++A + + I+ +++++ I V+ +
Sbjct: 352 DYAYTLIDIEFIPAEKLALIVKRIQDVEGILSVRVIK 388
>gi|260662249|ref|ZP_05863145.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus fermentum
28-3-CHN]
gi|260553632|gb|EEX26524.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus fermentum
28-3-CHN]
Length = 391
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 9/89 (10%), Positives = 32/89 (35%), Gaps = 6/89 (6%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + ++ + I++ +I ++ + + + +NI + L E+A + +
Sbjct: 301 VNLPDVVAPFT-SQHRFTIIHRNIPNMLGQISTAIAKAEVNIDN--LVNRAKGEYAYTMV 357
Query: 70 CIDG---SILNSVLEKLSVNVTIRFVKQF 95
+ + L+ + V+
Sbjct: 358 DVGELTAEQTEILTTTLNQIDAVSLVRLL 386
>gi|229060834|ref|ZP_04198189.1| D-isomer specific 2-hydroxyacid dehydrogenase [Bacillus cereus
AH603]
gi|228718481|gb|EEL70113.1| D-isomer specific 2-hydroxyacid dehydrogenase [Bacillus cereus
AH603]
Length = 390
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID + +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIMKENIVENISKITGVVAVRMI 389
>gi|297626207|ref|YP_003687970.1| D-3-phosphoglycerate dehydrogenase / erythronate 4-phosphate
dehydrogenase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921972|emb|CBL56532.1| D-3-phosphoglycerate dehydrogenase / erythronate 4-phosphate
dehydrogenase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 397
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 32/87 (36%), Gaps = 4/87 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + E+N + + ++ ++ G++ + ++L + NIA L +A++ +
Sbjct: 315 VNLPEVNTPPR-HGVRVLHIHRNVPGVMAQLNSVLSGHDANIAFQALSTRGDVGYAVTDV 373
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
S L+ +
Sbjct: 374 TAATSGWEE---DLAEVPNTISCRVIR 397
>gi|229075218|ref|ZP_04208212.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus Rock4-18]
gi|228707995|gb|EEL60174.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus Rock4-18]
Length = 390
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +V+E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENVVENISGISGVVAVRMI 389
>gi|229110680|ref|ZP_04240244.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus Rock1-15]
gi|228672748|gb|EEL28028.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus Rock1-15]
Length = 390
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|206969191|ref|ZP_03230146.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus
AH1134]
gi|206736232|gb|EDZ53390.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus
AH1134]
Length = 390
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|228966161|ref|ZP_04127223.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228793530|gb|EEM41071.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 390
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|229030943|ref|ZP_04186960.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus AH1271]
gi|228730367|gb|EEL81330.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus AH1271]
Length = 390
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|227875241|ref|ZP_03993383.1| phosphoglycerate dehydrogenase [Mobiluncus mulieris ATCC 35243]
gi|269978130|ref|ZP_06185080.1| D-3-phosphoglycerate dehydrogenase [Mobiluncus mulieris 28-1]
gi|306818503|ref|ZP_07452226.1| D-3-phosphoglycerate dehydrogenase [Mobiluncus mulieris ATCC 35239]
gi|307700706|ref|ZP_07637731.1| putative phosphoglycerate dehydrogenase [Mobiluncus mulieris
FB024-16]
gi|227844146|gb|EEJ54313.1| phosphoglycerate dehydrogenase [Mobiluncus mulieris ATCC 35243]
gi|269933639|gb|EEZ90223.1| D-3-phosphoglycerate dehydrogenase [Mobiluncus mulieris 28-1]
gi|304648676|gb|EFM45978.1| D-3-phosphoglycerate dehydrogenase [Mobiluncus mulieris ATCC 35239]
gi|307613701|gb|EFN92945.1| putative phosphoglycerate dehydrogenase [Mobiluncus mulieris
FB024-16]
Length = 413
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 7/72 (9%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ +++ + G++ + ++ +N+ LG + E I + + ++ +
Sbjct: 330 YRMSVIHQNTPGVMGHINQVMAAANVNVEGQILGTN--GEVGYVIADIASELPVAAVQDI 387
Query: 84 SVNVTIRFVKQF 95
+ T +
Sbjct: 388 NAMDTTIRCRVI 399
>gi|218898315|ref|YP_002446726.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus G9842]
gi|218544946|gb|ACK97340.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus G9842]
Length = 390
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|228940331|ref|ZP_04102902.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228973247|ref|ZP_04133836.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228979810|ref|ZP_04140131.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis Bt407]
gi|228779825|gb|EEM28071.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis Bt407]
gi|228786443|gb|EEM34433.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228819457|gb|EEM65511.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326940969|gb|AEA16865.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 390
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|319936546|ref|ZP_08010960.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Coprobacillus sp. 29_1]
gi|319808344|gb|EFW04904.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Coprobacillus sp. 29_1]
Length = 383
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 34/94 (36%), Gaps = 6/94 (6%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S + IN + + IC+++ ++ ++ +L INI +
Sbjct: 296 SGNIVNSVNFPTIN-EPRTTKYRICLIHKNVPNMLAQFATLLANQEINIENMV--NKAKD 352
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++A + + + + ++ + V+ E
Sbjct: 353 DYAYTIIDTNDVVGT---KEFESLENVIKVRVVE 383
>gi|229070722|ref|ZP_04203952.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus F65185]
gi|229080455|ref|ZP_04212976.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus Rock4-2]
gi|229151424|ref|ZP_04279627.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus m1550]
gi|229179510|ref|ZP_04306863.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus 172560W]
gi|229191312|ref|ZP_04318298.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus ATCC 10876]
gi|228592117|gb|EEK49950.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus ATCC 10876]
gi|228604011|gb|EEK61479.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus 172560W]
gi|228631967|gb|EEK88593.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus m1550]
gi|228702757|gb|EEL55222.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus Rock4-2]
gi|228712392|gb|EEL64337.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus F65185]
Length = 390
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|228908997|ref|ZP_04072827.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis IBL 200]
gi|228850719|gb|EEM95543.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis IBL 200]
Length = 390
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|218235354|ref|YP_002367966.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus B4264]
gi|229046932|ref|ZP_04192562.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus AH676]
gi|229145822|ref|ZP_04274202.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus BDRD-ST24]
gi|296503749|ref|YP_003665449.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis BMB171]
gi|218163311|gb|ACK63303.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus B4264]
gi|228637653|gb|EEK94103.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus BDRD-ST24]
gi|228724410|gb|EEL75737.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus AH676]
gi|296324801|gb|ADH07729.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis BMB171]
Length = 390
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|75764584|ref|ZP_00744038.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228901749|ref|ZP_04065921.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis IBL
4222]
gi|74487930|gb|EAO51692.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228857881|gb|EEN02369.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis IBL
4222]
Length = 390
Score = 55.4 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|229018491|ref|ZP_04175353.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus AH1273]
gi|229024747|ref|ZP_04181186.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus AH1272]
gi|228736590|gb|EEL87146.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus AH1272]
gi|228742843|gb|EEL92981.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus AH1273]
Length = 390
Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|228953547|ref|ZP_04115590.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228806131|gb|EEM52707.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 390
Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|229162140|ref|ZP_04290111.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus R309803]
gi|228621347|gb|EEK78202.1| D-3-phosphoglycerate dehydrogenase [Bacillus cereus R309803]
Length = 390
Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|301299408|ref|ZP_07205688.1| 4-phosphoerythronate dehydrogenase [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300853014|gb|EFK80618.1| 4-phosphoerythronate dehydrogenase [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 394
Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 34/96 (35%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + + D L + +++ ++ +V + IL + INI + +
Sbjct: 296 GDIVNSVNLPNVEMAFD-APLRLTLIHQNVPNMVGRITTILAKEEINIDNMI--NRSRGK 352
Query: 64 HAISFL---CIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + I L + ++L + V+
Sbjct: 353 IAYTMIDAADISEGKLKELKKELLEISEVIRVRALH 388
>gi|300214017|gb|ADJ78433.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus salivarius CECT
5713]
Length = 394
Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 34/96 (35%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + + D L + +++ ++ +V + IL + INI + +
Sbjct: 296 GDIVNSVNLPNVEMAFD-APLRLTLIHQNVPNMVGRITTILAKEEINIDNMI--NRSRGK 352
Query: 64 HAISFL---CIDGSILNSVLEKLSVNVTIRFVKQFE 96
A + + I L + ++L + V+
Sbjct: 353 IAYTMIDAADISEGKLKELKKELLEISEVIRVRALH 388
>gi|116328383|ref|YP_798103.1| D-3-phosphoglycerate dehydrogenase [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116121127|gb|ABJ79170.1| Dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis L550]
Length = 407
Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ + I V+ + G + + +++ E G NI+ +LG S +
Sbjct: 322 VNFPNLEITPLPSGQYRILNVHKNQPGFLKDINSMVSEIGANISSQNLGTSAEIGYLSMV 381
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ D S+ + + EK+ + +
Sbjct: 382 I--DKSVGDELKEKIEKHPFSIKTRIL 406
>gi|301106016|ref|XP_002902091.1| D-3-phosphoglycerate dehydrogenase [Phytophthora infestans T30-4]
gi|262098711|gb|EEY56763.1| D-3-phosphoglycerate dehydrogenase [Phytophthora infestans T30-4]
Length = 466
Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 16 NFDVDI---GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
D+ + I ++ ++ G++ + ++L +YGIN+ +L L ++
Sbjct: 385 EIDMLPIRNNSMRILHMHQNVPGVLSKIHSVLSDYGINVTSQYLQSDPRHG--YIALEVE 442
Query: 73 GSILNSVLEKLSVNVTIRFVKQF 95
V +L F++
Sbjct: 443 KFHAKVVTRELEKIKETIFLRTI 465
>gi|196038176|ref|ZP_03105486.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus
NVH0597-99]
gi|228959455|ref|ZP_04121144.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|196031446|gb|EDX70043.1| putative D-3-phosphoglycerate dehydrogenase [Bacillus cereus
NVH0597-99]
gi|228800231|gb|EEM47159.1| D-3-phosphoglycerate dehydrogenase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 390
Score = 55.4 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 5 GKPRFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G R + N ++ IG+ I I++ ++ +V + L E+ INIA S
Sbjct: 297 GNIR-NSVNYPNVELPYIGKKRITIMHQNVPNMVGQITGCLAEHHINIADMINRSKHSWA 355
Query: 64 HAI--SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ID I +++E +S + V+
Sbjct: 356 YTMIDIDNGIDDIIKENIVENISKITGVVAVRMI 389
>gi|45601085|gb|AAS70568.1| D-3-phosphoglycerate dehydrogenase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 384
Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 10 IKIQEINF-DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ + + G+ I V+ + G + + +++ G NI+ HLG S +
Sbjct: 299 VNFPNLEITPLPAGQYRILNVHKNQPGFLKDINSMVSAIGANISSQHLGTSAEIGYLSMV 358
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ D S+ + + EK+ + +
Sbjct: 359 I--DKSVGDELKEKIEKHPFSIKTRIL 383
>gi|319757901|gb|ADV69843.1| phosphoglycerate dehydrogenase and related dehydrogenase
[Streptococcus suis JS14]
Length = 393
Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NS 78
I ++N +I +V + + E GINI + ++A + L +D +
Sbjct: 315 APYRITLINKNIPNMVATITTAVSELGINIDNII--NKSKGDYAYTLLDLDEADKVKIEQ 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++ K I V+ +
Sbjct: 373 LVAKFEATDAIVKVRVIQ 390
>gi|304570495|ref|YP_001931.2| D-3-phosphoglycerate dehydrogenase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 407
Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 10 IKIQEINF-DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ + + G+ I V+ + G + + +++ G NI+ HLG S +
Sbjct: 322 VNFPNLEITPLPAGQYRILNVHKNQPGFLKDINSMVSAIGANISSQHLGTSAEIGYLSMV 381
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ D S+ + + EK+ + +
Sbjct: 382 I--DKSVGDELKEKIEKHPFSIKTRIL 406
>gi|296132881|ref|YP_003640128.1| MgtC/SapB transporter [Thermincola sp. JR]
gi|296031459|gb|ADG82227.1| MgtC/SapB transporter [Thermincola potens JR]
Length = 223
Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NSVLEK 82
+ + + G + +G LG++G+NI + L + + + + + ++
Sbjct: 150 LLLTIDNRPGQLGRIGCFLGDHGVNIHNIQLKQLKEGHQILMEVDVIMPNDLDMQELMHM 209
Query: 83 LSVNVTIRFV 92
L+ + V
Sbjct: 210 LADVPGVHQV 219
>gi|293603139|ref|ZP_06685573.1| D-3-phosphoglycerate dehydrogenase [Achromobacter piechaudii ATCC
43553]
gi|292818533|gb|EFF77580.1| D-3-phosphoglycerate dehydrogenase [Achromobacter piechaudii ATCC
43553]
Length = 398
Score = 55.0 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ E+ + G I V+ + G + + N++ ++G+NI L +
Sbjct: 315 VNFPELPYLEPAGATRILHVHRNAPGALGTLDNLMAQHGLNIVSQTL--QTKGQIGYVIT 372
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
++G + + V+ L + +
Sbjct: 373 DVEGQVDDIVMSTLRSHPITVRCDRL 398
>gi|146318321|ref|YP_001198033.1| phosphoglycerate dehydrogenase and related dehydrogenase
[Streptococcus suis 05ZYH33]
gi|146320514|ref|YP_001200225.1| phosphoglycerate dehydrogenase and related dehydrogenase
[Streptococcus suis 98HAH33]
gi|253751483|ref|YP_003024624.1| putative D-isomer specific 2-hydroxyacid dehydrogenase
[Streptococcus suis SC84]
gi|253753384|ref|YP_003026525.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus suis
P1/7]
gi|253755787|ref|YP_003028927.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus suis
BM407]
gi|145689127|gb|ABP89633.1| Phosphoglycerate dehydrogenase and related dehydrogenase
[Streptococcus suis 05ZYH33]
gi|145691320|gb|ABP91825.1| Phosphoglycerate dehydrogenase and related dehydrogenase
[Streptococcus suis 98HAH33]
gi|251815772|emb|CAZ51374.1| putative D-isomer specific 2-hydroxyacid dehydrogenase
[Streptococcus suis SC84]
gi|251818251|emb|CAZ56059.1| putative D-isomer specific 2-hydroxyacid dehydrogenase
[Streptococcus suis BM407]
gi|251819630|emb|CAR45373.1| putative D-isomer specific 2-hydroxyacid dehydrogenase
[Streptococcus suis P1/7]
gi|292558115|gb|ADE31116.1| putative D-3-phosphoglycerate dehydrogenase [Streptococcus suis
GZ1]
Length = 393
Score = 55.0 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NS 78
I ++N +I +V + + E GINI + ++A + L +D +
Sbjct: 315 APYRITLINKNIPNMVATITTAVSELGINIDNII--NKSKGDYAYTLLDLDEADKVKIEQ 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++ K I V+ +
Sbjct: 373 LVAKFEATDAIVKVRVIQ 390
>gi|268317722|ref|YP_003291441.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Rhodothermus marinus DSM 4252]
gi|262335256|gb|ACY49053.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Rhodothermus marinus DSM 4252]
Length = 406
Score = 55.0 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 28/79 (35%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
++ + + D +G++ V + + N+ A + + DG +V
Sbjct: 323 SPATHLLTVRHLDKVGVLASVLDEVRRANWNVQEMENLIFAGARAACARIRFDGRPDEAV 382
Query: 80 LEKLSVNVTIRFVKQFEFN 98
+++++ + V
Sbjct: 383 VQRIAALPDVLAVSLIPLE 401
>gi|24214611|ref|NP_712092.1| phosphoglycerate dehydrogenase and related dehydrogenase
[Leptospira interrogans serovar Lai str. 56601]
gi|24195584|gb|AAN49110.1| phosphoglycerate dehydrogenase and related dehydrogenase
[Leptospira interrogans serovar Lai str. 56601]
Length = 411
Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 10 IKIQEINF-DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ + + G+ I V+ + G + + +++ G NI+ HLG S +
Sbjct: 326 VNFPNLEITPLPAGQYRILNVHKNQPGFLKDINSMVSAIGANISSQHLGTSAEIGYLSMV 385
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ D S+ + + EK+ + +
Sbjct: 386 I--DKSVGDELKEKIEKHPFSIKTRIL 410
>gi|223932408|ref|ZP_03624410.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Streptococcus suis 89/1591]
gi|302023630|ref|ZP_07248841.1| D-3-phosphoglycerate dehydrogenase [Streptococcus suis 05HAS68]
gi|330832642|ref|YP_004401467.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Streptococcus suis ST3]
gi|223898862|gb|EEF65221.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Streptococcus suis 89/1591]
gi|329306865|gb|AEB81281.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Streptococcus suis ST3]
Length = 393
Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NS 78
I ++N +I +V + + E GINI + ++A + L +D +
Sbjct: 315 APYRITLINKNIPNMVATITTAVSELGINIDNII--NKSKGDYAYTLLDLDEADKVKIEQ 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++ K I V+ +
Sbjct: 373 LVAKFEATDAIVKVRVIQ 390
>gi|222152625|ref|YP_002561800.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus uberis
0140J]
gi|222113436|emb|CAR41117.1| putative D-isomer specific 2-hydroxyacid dehydrogenase
[Streptococcus uberis 0140J]
Length = 391
Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG---SILNS 78
I ++N ++ IV + + + INI + ++A + L +D ++
Sbjct: 315 APYRITLINKNVPNIVAKISTAVSDLDINIDNII--NRSKGDYAYTLLDLDECDRGKIDQ 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++E+ + I V+
Sbjct: 373 LVEEFEKSDNIVRVRLIT 390
>gi|53718885|ref|YP_107871.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
K96243]
gi|167815079|ref|ZP_02446759.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei 91]
gi|167918303|ref|ZP_02505394.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
BCC215]
gi|52209299|emb|CAH35244.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
K96243]
Length = 424
Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ V+ + G++ + +L + G NI HL + +D ++ L+ LS
Sbjct: 353 RLLNVHGNTPGVLAVLNTLLAQDGANIVAQHL--QTRGDIGYVVTDLDRVPSDAFLDTLS 410
Query: 85 VNVTIRFVKQFE 96
N +
Sbjct: 411 GNRAFTRSRLLR 422
>gi|126440714|ref|YP_001058380.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei 668]
gi|126220207|gb|ABN83713.1| phosphoglycerate dehydrogenase [Burkholderia pseudomallei 668]
Length = 424
Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ V+ + G++ + +L + G NI HL + +D ++ L+ LS
Sbjct: 353 RLLNVHGNTPGVLAVLNTLLAQDGANIVAQHL--QTRGDIGYVVTDLDRVPSDAFLDTLS 410
Query: 85 VNVTIRFVKQFE 96
N +
Sbjct: 411 GNRAFTRSRLLR 422
>gi|76812092|ref|YP_332885.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
1710b]
gi|254257960|ref|ZP_04949014.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
1710a]
gi|254298163|ref|ZP_04965616.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei 406e]
gi|76581545|gb|ABA51020.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
1710b]
gi|157806944|gb|EDO84114.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei 406e]
gi|254216649|gb|EET06033.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
1710a]
Length = 424
Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ V+ + G++ + +L + G NI HL + +D ++ L+ LS
Sbjct: 353 RLLNVHGNTPGVLAVLNTLLAQDGANIVAQHL--QTRGDIGYVVTDLDRVPSDAFLDTLS 410
Query: 85 VNVTIRFVKQFE 96
N +
Sbjct: 411 GNRAFTRSRLLR 422
>gi|126454274|ref|YP_001065618.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
1106a]
gi|134283836|ref|ZP_01770533.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei 305]
gi|167718891|ref|ZP_02402127.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei DM98]
gi|167737897|ref|ZP_02410671.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei 14]
gi|167823496|ref|ZP_02454967.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei 9]
gi|167845047|ref|ZP_02470555.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
B7210]
gi|167893590|ref|ZP_02480992.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei 7894]
gi|167902033|ref|ZP_02489238.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei NCTC
13177]
gi|167910273|ref|ZP_02497364.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei 112]
gi|217423628|ref|ZP_03455129.1| phosphoglycerate dehydrogenase [Burkholderia pseudomallei 576]
gi|226197510|ref|ZP_03793086.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
Pakistan 9]
gi|237811623|ref|YP_002896074.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
MSHR346]
gi|242315759|ref|ZP_04814775.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
1106b]
gi|254180323|ref|ZP_04886922.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei 1655]
gi|254188247|ref|ZP_04894758.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
Pasteur 52237]
gi|254198025|ref|ZP_04904447.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei S13]
gi|126227916|gb|ABN91456.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
1106a]
gi|134244824|gb|EBA44921.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei 305]
gi|157935926|gb|EDO91596.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
Pasteur 52237]
gi|169654766|gb|EDS87459.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei S13]
gi|184210863|gb|EDU07906.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei 1655]
gi|217393486|gb|EEC33507.1| phosphoglycerate dehydrogenase [Burkholderia pseudomallei 576]
gi|225930416|gb|EEH26427.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
Pakistan 9]
gi|237504968|gb|ACQ97286.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
MSHR346]
gi|242138998|gb|EES25400.1| D-3-phosphoglycerate dehydrogenase [Burkholderia pseudomallei
1106b]
Length = 424
Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ V+ + G++ + +L + G NI HL + +D ++ L+ LS
Sbjct: 353 RLLNVHGNTPGVLAVLNTLLAQDGANIVAQHL--QTRGDIGYVVTDLDRVPSDAFLDTLS 410
Query: 85 VNVTIRFVKQFE 96
N +
Sbjct: 411 GNRAFTRSRLLR 422
>gi|256255567|ref|ZP_05461103.1| D-3-phosphoglycerate dehydrogenase [Brucella ceti B1/94]
gi|261222771|ref|ZP_05937052.1| predicted protein [Brucella ceti B1/94]
gi|260921355|gb|EEX88008.1| predicted protein [Brucella ceti B1/94]
Length = 54
Score = 54.3 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 49 INIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+NIA+F LGR AI+ L +D I + L++L IR EFNV
Sbjct: 1 VNIANFALGRDHPGGDAIAMLYVDEQIPQAALDELMAQEAIRAATPLEFNV 51
>gi|116331109|ref|YP_800827.1| D-3-phosphoglycerate dehydrogenase [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116124798|gb|ABJ76069.1| Dehydrogenase [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 408
Score = 54.3 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 16 NFDVDI----GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI 71
N ++ G+ I V+ + G + + +++ E G NI+ +LG S + +
Sbjct: 326 NLEITPLPSSGQYRILNVHKNQPGFLKDINSMVSEIGANISSQNLGTSAEIGYLSMVI-- 383
Query: 72 DGSILNSVLEKLSVNVTIRFVKQF 95
D S+ + + EK+ + +
Sbjct: 384 DKSVGDELKEKIEKHPFSIKTRIL 407
>gi|83720197|ref|YP_443397.1| D-3-phosphoglycerate dehydrogenase [Burkholderia thailandensis
E264]
gi|167582445|ref|ZP_02375319.1| D-3-phosphoglycerate dehydrogenase [Burkholderia thailandensis
TXDOH]
gi|167620538|ref|ZP_02389169.1| D-3-phosphoglycerate dehydrogenase [Burkholderia thailandensis Bt4]
gi|257139646|ref|ZP_05587908.1| D-3-phosphoglycerate dehydrogenase [Burkholderia thailandensis
E264]
gi|83654022|gb|ABC38085.1| D-3-phosphoglycerate dehydrogenase [Burkholderia thailandensis
E264]
Length = 424
Score = 54.3 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ V+ + G++ + +L + G N+ HL + +D ++ LEKLS
Sbjct: 353 RLLNVHGNAPGVLAVLNTLLAQEGANVVAQHL--QTRGDIGYVVTDLDRVPSDAFLEKLS 410
Query: 85 VNVTIRFVKQFE 96
N +
Sbjct: 411 GNRAFTRSRLLR 422
>gi|167836089|ref|ZP_02462972.1| D-3-phosphoglycerate dehydrogenase [Burkholderia thailandensis
MSMB43]
Length = 436
Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ V+ + G++ + +L + G N+ HL + +D ++ L+KLS
Sbjct: 365 RLLNVHGNTPGVLAGLNTLLAQEGANVVAQHL--QTRGDIGYVVTDLDRVPSDAFLDKLS 422
Query: 85 VNVTIRFVKQFE 96
N +
Sbjct: 423 GNRAFTRSRLLR 434
>gi|289806814|ref|ZP_06537443.1| D-3-phosphoglycerate dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 53
Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 18/52 (34%)
Query: 44 LGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
E G+NIA +L S + + + DG + L + +
Sbjct: 1 FAEQGVNIAAQYLQTSARMGYVVIDIEADGDVAEKALLAMKAIPGTIRARLL 52
>gi|171780199|ref|ZP_02921103.1| hypothetical protein STRINF_01987 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281547|gb|EDT46982.1| hypothetical protein STRINF_01987 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 392
Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG---SILNS 78
I ++N ++ IV + + E GINI + ++A + L +D + ++
Sbjct: 315 APYRITLINKNVPNIVAKISTAVSELGINIDNII--NRSKGDYAYTLLDLDETDKAKVDH 372
Query: 79 VLEKLSVNVTIRFVKQF 95
++ + I V+
Sbjct: 373 LVANFEASDNIIRVRLI 389
>gi|238899106|ref|YP_002924788.1| D-3-phosphoglycerate dehydrogenase [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|229466866|gb|ACQ68640.1| D-3-phosphoglycerate dehydrogenase [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 413
Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 8/90 (8%), Positives = 30/90 (33%), Gaps = 6/90 (6%)
Query: 10 IKIQEINFDV-DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ ++ + + + GI+ + I E I I++ +L + + +
Sbjct: 325 VNFPHVSLPYHRKNTHRLLHIYQNRPGILNRIHQIFLEQKIRISNQYLQTNAQVGYVM-- 382
Query: 69 LCIDGSILNSVLEK---LSVNVTIRFVKQF 95
+ ++ + + E + ++
Sbjct: 383 IDVETQTSDKIKETARLMKEIDGTIKLRLL 412
>gi|224543653|ref|ZP_03684192.1| hypothetical protein CATMIT_02863 [Catenibacterium mitsuokai DSM
15897]
gi|224523426|gb|EEF92531.1| hypothetical protein CATMIT_02863 [Catenibacterium mitsuokai DSM
15897]
Length = 388
Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 8/79 (10%), Positives = 28/79 (35%), Gaps = 3/79 (3%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL 76
+ +CI++ +I ++ N + +NI + E+A + + +
Sbjct: 308 VEPRTTTYRVCIIHKNIPNMLAVFANAFAKKSMNIENMV--NKARGEYAYTVIDT-NDLS 364
Query: 77 NSVLEKLSVNVTIRFVKQF 95
+ + + + + +
Sbjct: 365 EDITKVIENHEGVIKARII 383
>gi|311747872|ref|ZP_07721657.1| probable L-serine dehydratase, alpha chain [Algoriphagus sp. PR1]
gi|126575866|gb|EAZ80176.1| probable L-serine dehydratase, alpha chain [Algoriphagus sp. PR1]
Length = 522
Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 33/94 (35%), Gaps = 8/94 (8%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I+I + + + + + ++D + + L + + L
Sbjct: 129 GGGMIEVIEIDGVKVSLAGDKYVTLVYSSD----LSKIKTFLAQS---LDSEELEIHTDQ 181
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + I S+LE+L + +KQ +
Sbjct: 182 GEFLAVTDL-SFIDKSILEELKEIEGVSQIKQIK 214
>gi|288905937|ref|YP_003431159.1| phosphoglycerate dehydrogenase [Streptococcus gallolyticus UCN34]
gi|325978903|ref|YP_004288619.1| D-3-phosphoglycerate dehydrogenase [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|288732663|emb|CBI14235.1| putative phosphoglycerate dehydrogenase [Streptococcus gallolyticus
UCN34]
gi|325178831|emb|CBZ48875.1| D-3-phosphoglycerate dehydrogenase [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
Length = 392
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NS 78
I ++N ++ IV + + + GINI + ++A + L +D + +
Sbjct: 315 APYRITLINKNVPNIVAKISTAVSDLGINIDNII--NRSKGDYAYTLLDLDETDKAKIDH 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++ + I V+
Sbjct: 373 LVANFEASDNIVRVRLIT 390
>gi|15672586|ref|NP_266760.1| D-3-phosphoglycerate dehydrogenase [Lactococcus lactis subsp.
lactis Il1403]
gi|12723499|gb|AAK04702.1|AE006293_8 D-3-phosphoglycerate dehydrogenase [Lactococcus lactis subsp.
lactis Il1403]
gi|326406105|gb|ADZ63176.1| D-3-phosphoglycerate dehydrogenase [Lactococcus lactis subsp.
lactis CV56]
Length = 398
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NSV 79
+ ++N ++ +V + + INIA+ ++A + L +D ++
Sbjct: 319 PYRVTLINKNVPNVVAQISLAVAAENINIANIV--NRGQGDYAYTLLDLDEKDEGKLAAL 376
Query: 80 LEKLSVNVTIRFVKQFE 96
+ + I V+ E
Sbjct: 377 VSRFEAADNIIRVRLIE 393
>gi|281491070|ref|YP_003353050.1| D-3-phosphoglycerate dehydrogenase [Lactococcus lactis subsp.
lactis KF147]
gi|281374828|gb|ADA64348.1| D-3-phosphoglycerate dehydrogenase [Lactococcus lactis subsp.
lactis KF147]
Length = 398
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NSV 79
+ ++N ++ +V + + INIA+ ++A + L +D ++
Sbjct: 319 PYRVTLINKNVPNVVAQISLAVAAENINIANIV--NRGQGDYAYTLLDLDEKDEGKLAAL 376
Query: 80 LEKLSVNVTIRFVKQFE 96
+ + I V+ E
Sbjct: 377 VSRFEAADNIIRVRLIE 393
>gi|306831956|ref|ZP_07465111.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|304425882|gb|EFM28999.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
Length = 392
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NS 78
I ++N ++ IV + + + GINI + ++A + L +D + +
Sbjct: 315 APYRITLINKNVPNIVAKISTAVSDLGINIDNII--NRSKGDYAYTLLDLDETDKAKIDH 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++ + I V+
Sbjct: 373 LVANFEASDNIVRVRLIT 390
>gi|270157548|ref|ZP_06186205.1| D-3-phosphoglycerate dehydrogenase [Legionella longbeachae D-4968]
gi|289164070|ref|YP_003454208.1| D-isomer specific 2-hydroxyacid dehydrogenase [Legionella
longbeachae NSW150]
gi|269989573|gb|EEZ95827.1| D-3-phosphoglycerate dehydrogenase [Legionella longbeachae D-4968]
gi|288857243|emb|CBJ11068.1| putative D-isomer specific 2-hydroxyacid dehydrogenase [Legionella
longbeachae NSW150]
Length = 399
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/98 (10%), Positives = 30/98 (30%), Gaps = 6/98 (6%)
Query: 3 SDGKPRFIKIQEINFDVD--IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G + I+ + +N + G++ + + + N+
Sbjct: 299 HGGIEYSVNFPNISLSTAQIPNCHRMLTINQNTPGVIGKITQKISKLKYNVEQME--NKS 356
Query: 61 STEHAISFLCIDGSIL--NSVLEKLSVNVTIRFVKQFE 96
AI+ + + G + ++L ++ V+
Sbjct: 357 RGPIAINLIDLSGPKESLPELCKQLKEISSLMHVRHIT 394
>gi|290579990|ref|YP_003484382.1| putative D-3-phosphoglycerate dehydrogenase [Streptococcus mutans
NN2025]
gi|254996889|dbj|BAH87490.1| putative D-3-phosphoglycerate dehydrogenase [Streptococcus mutans
NN2025]
Length = 393
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NS 78
I ++N ++ IV + + INIA+ ++A + L +D + +
Sbjct: 315 APYRITLINKNVPNIVARLSTAVSNLDINIANIL--NRSKGDYAYTILDLDETDKAKIDD 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++ + I V+ +
Sbjct: 373 LVANFEASDNIVRVRLIK 390
>gi|325568904|ref|ZP_08145197.1| D-3-phosphoglycerate dehydrogenase [Enterococcus casseliflavus ATCC
12755]
gi|325157942|gb|EGC70098.1| D-3-phosphoglycerate dehydrogenase [Enterococcus casseliflavus ATCC
12755]
Length = 397
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 9/97 (9%), Positives = 30/97 (30%), Gaps = 6/97 (6%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + + D G + I+ E G++I + R
Sbjct: 298 AGTIQESVNFPHAELPF-LAPYRLALFYHDKPGAFAPLLRIISEAGVDIDNLASERKA-- 354
Query: 63 EHAISFLCIDGSIL---NSVLEKLSVNVTIRFVKQFE 96
A + + +D + + +++ + + +
Sbjct: 355 GVAYTLIDLDETNEILLQDLQKQIQQETAVIRARLIK 391
>gi|24380031|ref|NP_721986.1| putative D-3-phosphoglycerate dehydrogenase [Streptococcus mutans
UA159]
gi|24378021|gb|AAN59292.1|AE014995_9 putative D-3-phosphoglycerate dehydrogenase [Streptococcus mutans
UA159]
Length = 393
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NS 78
I ++N ++ IV + + INIA+ ++A + L +D + +
Sbjct: 315 APYRITLINKNVPNIVARLSTAVSNLDINIANIL--NRSKGDYAYTILDLDETDKAKIDD 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++ + I V+ +
Sbjct: 373 LVANFEASDNIVRVRLIK 390
>gi|219118215|ref|XP_002179887.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408940|gb|EEC48873.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 471
Score = 53.1 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 30/79 (37%), Gaps = 9/79 (11%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS------ 78
I ++N +I G + + + +GE +NI E A + + +D +
Sbjct: 378 RISVINKNIPGCLAKITSCIGEMDVNIVQQI--NQSRGEIAYNVIDLDVKTDHEGKVNLT 435
Query: 79 -VLEKLSVNVTIRFVKQFE 96
+ ++++ + +
Sbjct: 436 KLQREITMLDGVLSSRILS 454
>gi|302850341|ref|XP_002956698.1| hypothetical protein VOLCADRAFT_107347 [Volvox carteri f.
nagariensis]
gi|300258059|gb|EFJ42300.1| hypothetical protein VOLCADRAFT_107347 [Volvox carteri f.
nagariensis]
Length = 523
Score = 52.7 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 7/96 (7%)
Query: 5 GKPR-FIKIQEINFDVDIG--RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
G R + + D G +CIVN + G++ + LG +NI +
Sbjct: 397 GTIRNSVNFPQTVLDKKPGHIGGRLCIVNKNEAGVLGQITTFLGTRNVNIEQQI--NTSR 454
Query: 62 TEHAISFLCIDGSILNSVLEK--LSVNVTIRFVKQF 95
E A + L + L++ I +
Sbjct: 455 GEIAYTVLDFGKVEDPAGLQEGLAKSCPGIISSRFI 490
>gi|319745556|gb|EFV97858.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
agalactiae ATCC 13813]
Length = 393
Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV-- 79
I ++N ++ IV + + E GINI + ++A + + +D + N +
Sbjct: 315 APFRITLINKNVPNIVAKISTAVSELGINIDNII--NRSKGDYAYTLIDLDETDNNKIST 372
Query: 80 -LEKLSVNVTIRFVKQF 95
+E+ + I V+
Sbjct: 373 LIEEFEGDENIVRVRLI 389
>gi|116511394|ref|YP_808610.1| D-3-phosphoglycerate dehydrogenase [Lactococcus lactis subsp.
cremoris SK11]
gi|116107048|gb|ABJ72188.1| D-3-phosphoglycerate dehydrogenase [Lactococcus lactis subsp.
cremoris SK11]
Length = 398
Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NSV 79
+ ++N ++ +V + + E INIA+ + A + L +D ++
Sbjct: 319 PYRVTLINKNVPNVVAQISIAVAEENINIANIV--NRGQGDFAYTLLDLDEKDERKLAAL 376
Query: 80 LEKLSVNVTIRFVKQFE 96
+ + + I V+ E
Sbjct: 377 VSRFEASENIVRVRLIE 393
>gi|306834080|ref|ZP_07467200.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus bovis
ATCC 700338]
gi|304423653|gb|EFM26799.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus bovis
ATCC 700338]
Length = 392
Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NS 78
I ++N ++ IV + + + GINI + ++A + L +D + +
Sbjct: 315 APYRITLINKNVPNIVAKISTAVSDLGINIDNII--NRSKGDYAYTLLDLDETDKAKIDH 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++ + I V+
Sbjct: 373 LVANFESSDNIVRVRLIT 390
>gi|22537708|ref|NP_688559.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Streptococcus agalactiae 2603V/R]
gi|76786837|ref|YP_330189.1| D-3-phosphoglycerate dehydrogenase, putative [Streptococcus
agalactiae A909]
gi|22534597|gb|AAN00432.1|AE014263_11 D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Streptococcus agalactiae 2603V/R]
gi|76561894|gb|ABA44478.1| D-3-phosphoglycerate dehydrogenase, putative [Streptococcus
agalactiae A909]
Length = 393
Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV-- 79
I ++N ++ IV + + E GINI + ++A + + +D + N +
Sbjct: 315 APFRITLINKNVPNIVAKISTAVSELGINIDNII--NRSKGDYAYTLIDLDETDNNKIST 372
Query: 80 -LEKLSVNVTIRFVKQF 95
+E+ + I V+
Sbjct: 373 LIEEFEGDENIVRVRLI 389
>gi|25011659|ref|NP_736054.1| hypothetical protein gbs1619 [Streptococcus agalactiae NEM316]
gi|77413420|ref|ZP_00789612.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Streptococcus agalactiae 515]
gi|24413199|emb|CAD47278.1| Unknown [Streptococcus agalactiae NEM316]
gi|77160514|gb|EAO71633.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Streptococcus agalactiae 515]
Length = 393
Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV-- 79
I ++N ++ IV + + E GINI + ++A + + +D + N +
Sbjct: 315 APFRITLINKNVPNIVAKISTAVSELGINIDNII--NRSKGDYAYTLIDLDETDNNKIST 372
Query: 80 -LEKLSVNVTIRFVKQF 95
+E+ + I V+
Sbjct: 373 LIEEFEGDENIVRVRLI 389
>gi|77406662|ref|ZP_00783705.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Streptococcus agalactiae H36B]
gi|77411408|ref|ZP_00787755.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Streptococcus agalactiae CJB111]
gi|77162581|gb|EAO73545.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Streptococcus agalactiae CJB111]
gi|77174734|gb|EAO77560.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Streptococcus agalactiae H36B]
Length = 393
Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV-- 79
I ++N ++ IV + + E GINI + ++A + + +D + N +
Sbjct: 315 APFRITLINKNVPNIVAKISTAVSELGINIDNII--NRSKGDYAYTLIDLDETDNNKIST 372
Query: 80 -LEKLSVNVTIRFVKQF 95
+E+ + I V+
Sbjct: 373 LIEEFEGDENIVRVRLI 389
>gi|326332131|ref|ZP_08198415.1| D-3-phosphoglycerate dehydrogenase [Nocardioidaceae bacterium
Broad-1]
gi|325950102|gb|EGD42158.1| D-3-phosphoglycerate dehydrogenase [Nocardioidaceae bacterium
Broad-1]
Length = 398
Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + G + +++ + G++ + N+L G+N+ +L S T ++ +
Sbjct: 314 VNLPAVQPPPMAGGSRLALLHDSVPGVLAELNNLLASEGVNVTGQYLATSGETGFVVTDV 373
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQ 94
S+ + LEK++ N R+V+
Sbjct: 374 ---TSVPPTTLEKIAGNPHTRWVRA 395
>gi|125623431|ref|YP_001031914.1| D-3-phosphoglycerate dehydrogenase [Lactococcus lactis subsp.
cremoris MG1363]
gi|124492239|emb|CAL97168.1| D-3-phosphoglycerate dehydrogenase [Lactococcus lactis subsp.
cremoris MG1363]
gi|300070178|gb|ADJ59578.1| D-3-phosphoglycerate dehydrogenase [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 398
Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NSV 79
+ ++N ++ +V + + E INIA+ + A + L +D ++
Sbjct: 319 PYRVTLINKNVPNVVAQISLAVAEENINIANIV--NRGQGDFAYTLLDLDEKDERKLAAL 376
Query: 80 LEKLSVNVTIRFVKQFE 96
+ + + I V+ E
Sbjct: 377 VSRFEASENIVRVRLIE 393
>gi|119719798|ref|YP_920293.1| amino acid-binding ACT domain-containing protein [Thermofilum
pendens Hrk 5]
gi|119524918|gb|ABL78290.1| amino acid-binding ACT domain protein [Thermofilum pendens Hrk 5]
Length = 176
Score = 52.7 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 23 RLMICI--VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ ++ D GI+ +V + L E GINI ++ + + V+
Sbjct: 102 GYRCLVVEIHEDRPGILAWVASALAEKGINILQVVAEDPNIYREPKLYVVVSKPVPGEVI 161
Query: 81 EKLSVNVTIRFVKQ 94
EK+ + ++ V
Sbjct: 162 EKILQHPAVKRVTL 175
>gi|313891279|ref|ZP_07824897.1| 4-phosphoerythronate dehydrogenase [Streptococcus pseudoporcinus
SPIN 20026]
gi|313120346|gb|EFR43467.1| 4-phosphoerythronate dehydrogenase [Streptococcus pseudoporcinus
SPIN 20026]
Length = 392
Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG---SILNS 78
I ++N ++ IV + + INI + ++A + + +D +
Sbjct: 315 APYRITLINKNVPNIVATISTAVSALDINIDNII--NRSKGDYAYTLIDLDKCDLKKVKQ 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++E V+ I V+ +
Sbjct: 373 LVEDFKVSENIIRVRLIK 390
>gi|320547313|ref|ZP_08041604.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
equinus ATCC 9812]
gi|320448011|gb|EFW88763.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
equinus ATCC 9812]
Length = 392
Score = 52.3 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV-- 79
I ++N ++ IV + + E GINI + E+A + L +D + V
Sbjct: 315 APYRITLINKNVPNIVAKISTAVSELGINIDNII--NRSKGEYAYTLLDLDENDKTKVNH 372
Query: 80 -LEKLSVNVTIRFVKQF 95
+E + I V+
Sbjct: 373 LVENFENSDNIVRVRLI 389
>gi|169827078|ref|YP_001697236.1| L-serine dehydratase subunit beta [Lysinibacillus sphaericus C3-41]
gi|168991566|gb|ACA39106.1| Probable L-serine dehydratase, beta chain [Lysinibacillus
sphaericus C3-41]
Length = 192
Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 19/48 (39%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGIN 50
GK ++ + G I +V+ D G + V N L + +N
Sbjct: 126 GGGKIEVSEVNGFKLRLTGGMPAILVVHDDRAGCIANVANCLAMHEVN 173
>gi|320093992|ref|ZP_08025818.1| D-3-phosphoglycerate dehydrogenase [Actinomyces sp. oral taxon 178
str. F0338]
gi|319979073|gb|EFW10590.1| D-3-phosphoglycerate dehydrogenase [Actinomyces sp. oral taxon 178
str. F0338]
Length = 402
Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 10 IKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ + ++ I +++A++ G++ V +L + G N+ L S +T + ++
Sbjct: 315 VNLPNLSLGAGPASLSRIRLIHANVPGVLARVNQVLADAGANVDGQILSTSGATGYVLT- 373
Query: 69 LCIDGSILNSVLEKLSVNVTIRF 91
+ + + L +L +
Sbjct: 374 -DVSSPLDGAALARLEALDSTIR 395
>gi|319778776|ref|YP_004129689.1| D-3-phosphoglycerate dehydrogenase [Taylorella equigenitalis MCE9]
gi|317108800|gb|ADU91546.1| D-3-phosphoglycerate dehydrogenase [Taylorella equigenitalis MCE9]
Length = 409
Score = 51.2 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 10/92 (10%), Positives = 30/92 (32%), Gaps = 2/92 (2%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ E+ + ++ + G++ V + + G+NI +L +
Sbjct: 319 GTTITSVNFPEVGLTPNKSASRFMHIHENKPGVLAEVNKVFIDSGLNILGQYLQTNAEIG 378
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + ++L+KL +
Sbjct: 379 YVVVDTV--VTDTATILDKLKAIDGTIKTRVI 408
>gi|330718891|ref|ZP_08313491.1| D-3-phosphoglycerate dehydrogenase [Leuconostoc fallax KCTC 3537]
Length = 392
Score = 51.2 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 36/100 (36%), Gaps = 6/100 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I+ + + I++ ++ ++ + N G++GINI L
Sbjct: 296 GNVVNSVNLPSIDEPFR-TKYRVSIIHRNVPTMLSQIANFFGDHGINIE--QLSNRAKNN 352
Query: 64 HAISFLCIDGSILNS---VLEKLSVNVTIRFVKQFEFNVD 100
A + + ++ + E+ I + + N D
Sbjct: 353 IAYTLISLNALTDEEWQLIHERFDQVDDIFQTRVLKNNQD 392
>gi|326428240|gb|EGD73810.1| D-3-phosphoglycerate dehydrogenase [Salpingoeca sp. ATCC 50818]
Length = 478
Score = 50.8 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 32/88 (36%), Gaps = 6/88 (6%)
Query: 10 IKIQEINF--DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + E+N + G+ + + + G++ + IL NI+ L S+ + +
Sbjct: 384 VNVPEVNVTRKLQPGQSRVLSFHINTPGVLRDINRILSIA--NISSQQLETSERIGYLVV 441
Query: 68 FLCIDGSILNSVLEKLSVNVTIRFVKQF 95
L D V +L + +
Sbjct: 442 DLEADHI--EQVKSELEALDSNVRCRIL 467
>gi|20094461|ref|NP_614308.1| transcription regulator [Methanopyrus kandleri AV19]
gi|19887554|gb|AAM02238.1| Predicted transcriptional regulator of amino acid metabolism
consisting of an ACT domain and a DNA-binding HTH domain
[Methanopyrus kandleri AV19]
Length = 171
Score = 50.8 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 33/92 (35%), Gaps = 9/92 (9%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V S G+ ++ GR I I D G++ V N L G+NI L
Sbjct: 81 VRSGGRVTIVRRGG-------GRARILIEAEDRPGLLADVTNRLASAGVNILETEL--KV 131
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
AI + + VL++L + V
Sbjct: 132 EEGIAIMEFEAENVVHEEVLQELDGLSGLIRV 163
>gi|116623056|ref|YP_825212.1| D-isomer specific 2-hydroxyacid dehydrogenase [Candidatus
Solibacter usitatus Ellin6076]
gi|116226218|gb|ABJ84927.1| D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
[Candidatus Solibacter usitatus Ellin6076]
Length = 400
Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 31/93 (33%), Gaps = 5/93 (5%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
P + + + + + D G++ V + + GIN+ + E
Sbjct: 310 GKVPNVVNL----ARTTPATCALVVRHLDRPGVLAAVLDSVRAAGINVQEMENIIFEGAE 365
Query: 64 HAISFLCIDGSILNSVLEKLS-VNVTIRFVKQF 95
A++ + ++ VL ++ N I
Sbjct: 366 AAVARIHLETVPDEDVLGRIRGSNPHILEANVI 398
>gi|159468534|ref|XP_001692429.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278142|gb|EDP03907.1| predicted protein [Chlamydomonas reinhardtii]
Length = 391
Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 7/96 (7%)
Query: 5 GKPR-FIKIQEINFDVDIG--RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
G R + + D G +CIVN + G++ + LG INI +
Sbjct: 275 GTIRNSVNFPQTVLDKKPGHIGGRLCIVNKNEAGVLGQITTFLGTQNINIEQQI--NTSR 332
Query: 62 TEHAISFLCIDGSILNSVLEK--LSVNVTIRFVKQF 95
+ A + L + L+ I +
Sbjct: 333 GDIAYTVLDFGKVEDPAGLQAGLAKACPAIISSRFI 368
>gi|326693751|ref|ZP_08230756.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Leuconostoc argentinum KCTC 3773]
Length = 392
Score = 50.8 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 31/93 (33%), Gaps = 6/93 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ +I+ + + I++ ++ ++ + G+ GINI L
Sbjct: 296 GNIINSVNYPDIDEPFV-TKYRVGIIHENVPNMISQISKFFGDNGINIE--QLSNRAVGA 352
Query: 64 HAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
+A + + I+ V L + +
Sbjct: 353 YAYTLVAINDFTPEQQEYVKTALDEIPHVILTR 385
>gi|325000394|ref|ZP_08121506.1| D-3-phosphoglycerate dehydrogenase [Pseudonocardia sp. P1]
Length = 399
Score = 50.4 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 31/93 (33%), Gaps = 2/93 (2%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
V P + + + G + ++ G++ + +L + G+N+ L
Sbjct: 305 VTGGATPLSVSLPNVGAPNPAGVFRMAYLHTSKPGVLADINRLLADAGVNVTGQSLSTW- 363
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVK 93
+ D + + VL L +++
Sbjct: 364 -GDLGYVLTDTDRVLPDDVLSALGRAAQTVWLR 395
>gi|220918253|ref|YP_002493557.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Anaeromyxobacter dehalogenans 2CP-1]
gi|219956107|gb|ACL66491.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Anaeromyxobacter dehalogenans 2CP-1]
Length = 399
Score = 50.4 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R + + + D +G++ V ++ E GIN A + +D +V
Sbjct: 321 TPARARLVVRHVDRVGVIANVMALIREAGINAQEIRNTVFDEAVAASCAIDLDERPPEAV 380
Query: 80 LEKLSV-NVTIRFV 92
+E++ I FV
Sbjct: 381 VERIRARVDEILFV 394
>gi|197123448|ref|YP_002135399.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Anaeromyxobacter sp. K]
gi|196173297|gb|ACG74270.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Anaeromyxobacter sp. K]
Length = 399
Score = 50.4 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R + + + D +G++ V ++ E GIN A + +D +V
Sbjct: 321 TPARARLVVRHVDRVGVIANVMALIREAGINAQEIRNTVFDEAVAASCAIDLDERPPEAV 380
Query: 80 LEKLSV-NVTIRFV 92
+E++ I FV
Sbjct: 381 VERIRARVDEILFV 394
>gi|206895819|ref|YP_002247226.1| GTP pyrophosphokinase [Coprothermobacter proteolyticus DSM 5265]
gi|206738436|gb|ACI17514.1| GTP pyrophosphokinase [Coprothermobacter proteolyticus DSM 5265]
Length = 658
Score = 50.4 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 10/83 (12%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
D+ I D LG++ +G++ G+NI + R Q E + +
Sbjct: 578 DGYPVDIK-------ITARDRLGLLADIGSVFAVAGLNIDKITVQRRQRIEQIKILVEVK 630
Query: 73 GSILNS---VLEKLSVNVTIRFV 92
+ +L KLS I V
Sbjct: 631 LKNKDDFQVILNKLSEMPEIIEV 653
>gi|170016916|ref|YP_001727835.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Leuconostoc citreum KM20]
gi|169803773|gb|ACA82391.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Leuconostoc citreum KM20]
Length = 392
Score = 50.4 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 31/93 (33%), Gaps = 6/93 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ +IN + + I++ ++ ++ + G+ GINI L
Sbjct: 296 GNIVNSVNYPDINEPFV-TKYRVGIIHENVPNMISQISKFFGDNGINIE--QLSNRAVGA 352
Query: 64 HAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
+A + + I+ V L + +
Sbjct: 353 YAYTLVAINDFTDEQQAYVKTALDEIPHVILTR 385
>gi|77408317|ref|ZP_00785059.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Streptococcus agalactiae COH1]
gi|77173080|gb|EAO76207.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Streptococcus agalactiae COH1]
Length = 234
Score = 50.0 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV-- 79
I ++N ++ I+ + + GINI + ++A + + +D + N +
Sbjct: 156 APFRITLINKNVPNIMAKISTAVSVLGINIDNII--NRSKGDYAYTLIDLDETDNNKIST 213
Query: 80 -LEKLSVNVTIRFVKQF 95
+E+ + I V+
Sbjct: 214 LIEEFEGDENIVRVRLI 230
>gi|255071047|ref|XP_002507605.1| predicted protein [Micromonas sp. RCC299]
gi|226522880|gb|ACO68863.1| predicted protein [Micromonas sp. RCC299]
Length = 495
Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC-IDGSILNSVL 80
+CIVN + G + + LG G+NI+ + + A + + + L
Sbjct: 400 SGARLCIVNRNEPGALGEITTFLGSKGLNISQQI--NTSRGDIAYTVIDFTNQPEDAEAL 457
Query: 81 E-KLSVNVT-IRFVKQF 95
+ +L+ I ++
Sbjct: 458 QVELAAACNFIISLRFL 474
>gi|159468766|ref|XP_001692545.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278258|gb|EDP04023.1| predicted protein [Chlamydomonas reinhardtii]
Length = 383
Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 31/96 (32%), Gaps = 7/96 (7%)
Query: 5 GKPR-FIKIQEINFDVDIG--RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
G R + + G +CIVN + G++ + LG +NI +
Sbjct: 268 GTIRNSVNFPQTVLPPKPGHVGGRLCIVNKNEAGVLGQITTFLGTQKVNIEQQI--NTSR 325
Query: 62 TEHAISFLCIDGSILNSVLEK--LSVNVTIRFVKQF 95
+ A + L + + L+ + +
Sbjct: 326 GDIAYTVLDLSKIDDPAGLQDGLAKACPGVISSRFI 361
>gi|227431947|ref|ZP_03913967.1| D-3-phosphoglycerate dehydrogenase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227352232|gb|EEJ42438.1| D-3-phosphoglycerate dehydrogenase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 392
Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 31/93 (33%), Gaps = 6/93 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ +IN + + I++ ++ ++ + G++ INI L
Sbjct: 296 GNIVNSVNYPDINEPFT-TKYRVGIIHENVPNMLGQISKFFGDHNINIE--QLSNRAVGN 352
Query: 64 HAISFLCIDG---SILNSVLEKLSVNVTIRFVK 93
+A + + I+ V L + +
Sbjct: 353 YAYTMVAINDFTEEQQELVKTALDEIPHVILTR 385
>gi|116618558|ref|YP_818929.1| D-3-phosphoglycerate dehydrogenase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116097405|gb|ABJ62556.1| D-3-phosphoglycerate dehydrogenase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 392
Score = 50.0 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 31/93 (33%), Gaps = 6/93 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ +IN + + I++ ++ ++ + G++ INI L
Sbjct: 296 GNIVNSVNYPDINEPFT-TKYRVGIIHENVPNMLGQISKFFGDHNINIE--QLSNRAVGN 352
Query: 64 HAISFLCIDG---SILNSVLEKLSVNVTIRFVK 93
+A + + I+ V L + +
Sbjct: 353 YAYTMVAINDFTEEQQELVKTALDEIPHVILTR 385
>gi|302781594|ref|XP_002972571.1| hypothetical protein SELMODRAFT_413037 [Selaginella moellendorffii]
gi|300160038|gb|EFJ26657.1| hypothetical protein SELMODRAFT_413037 [Selaginella moellendorffii]
Length = 378
Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+G P ++ + + DV + +I D GI V G G + +
Sbjct: 288 NGLPHLSQVGQFSMDVSLEGSVILCKQVDQPGITGKVA---GRRERERELHERGEDFARK 344
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTI 89
A+ + +D VL ++ +
Sbjct: 345 QAVMAIGVDEEPSKEVLHRIGAIPAV 370
>gi|284990959|ref|YP_003409513.1| NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase protein
[Geodermatophilus obscurus DSM 43160]
gi|284064204|gb|ADB75142.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Geodermatophilus obscurus DSM 43160]
Length = 402
Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+++ ++ G++ ++GE+G+N+ L +A + ++ +L L
Sbjct: 329 RFALLHRNVPGVLARADALVGEHGLNVDGQVLATRGELGYA--VTDVGAALPPDLLAALQ 386
Query: 85 VNVTIRF 91
Sbjct: 387 ALPETVR 393
>gi|325192027|emb|CCA26493.1| D3phosphoglycerate dehydrogenase putative [Albugo laibachii Nc14]
Length = 441
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I ++ ++ G++ + L ++G+N+ HL H+ L I+ V+ +LS
Sbjct: 372 RILHMHHNVPGVLSKIHAALSDFGVNVISQHLQSDPK--HSYIALEIERFHAKLVMRELS 429
Query: 85 VNVTIRFVKQF 95
F++
Sbjct: 430 KIGETIFLRAL 440
>gi|94313462|ref|YP_586671.1| D-3-phosphoglycerate dehydrogenase [Cupriavidus metallidurans CH34]
gi|93357314|gb|ABF11402.1| D-3-phosphoglycerate dehydrogenase, NAD-binding [Cupriavidus
metallidurans CH34]
Length = 432
Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ ++ + G + L E G NI L +AI+ + + E L
Sbjct: 361 RVLNIHYNRPGTLSHFNQALAEIGANIVAQQLQTEGDIGYAITDISL--VPPAGWAEALM 418
Query: 85 VNVTIRFVKQF 95
+ +
Sbjct: 419 KDDAFIRTRVI 429
>gi|224001546|ref|XP_002290445.1| D-3-phosphoglycerate dehydrogenase [Thalassiosira pseudonana
CCMP1335]
gi|220973867|gb|EED92197.1| D-3-phosphoglycerate dehydrogenase [Thalassiosira pseudonana
CCMP1335]
Length = 479
Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN------- 77
+VN ++ G++ + ++ ++ INI + A + + ID +I +
Sbjct: 386 RFTVVNKNVPGMLATISDVFAKHSINI--LQQINVSRGDVAYNVIDIDPAIADGESVNLK 443
Query: 78 SVLEKLSVNVTIRFVKQF 95
+ ++L++++ + +
Sbjct: 444 DLQKELTMHMGVLSSRII 461
>gi|219118213|ref|XP_002179886.1| 2-hydroxyacid dehydrogenase [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408939|gb|EEC48872.1| 2-hydroxyacid dehydrogenase [Phaeodactylum tricornutum CCAP 1055/1]
Length = 452
Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 8/84 (9%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
+ + I +VN ++ G + + + + NI A S L ID N
Sbjct: 351 ECSGSTVRITVVNLNVPGCLAKITDAVASENFNIVQQI--NQSRGNIAYSVLDIDTEGHN 408
Query: 78 SVL------EKLSVNVTIRFVKQF 95
+V EK+++ + +
Sbjct: 409 AVADFKSVQEKITMLEGVLCSRII 432
>gi|218282145|ref|ZP_03488444.1| hypothetical protein EUBIFOR_01026 [Eubacterium biforme DSM 3989]
gi|218216871|gb|EEC90409.1| hypothetical protein EUBIFOR_01026 [Eubacterium biforme DSM 3989]
Length = 382
Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 9/83 (10%), Positives = 30/83 (36%), Gaps = 8/83 (9%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + D++ I ++ + ++ + +IL + I +L + A + +
Sbjct: 303 VNLPNAKMDMN-SPFRITCIHDNKPKMISQITDILKDANI----ENLMNKSKKDIAYTII 357
Query: 70 CIDGSILNSVLEKLSVNVTIRFV 92
+D + + + + V
Sbjct: 358 DLDTKVD---ITPIEKINGMIKV 377
>gi|270264000|ref|ZP_06192268.1| hypothetical protein SOD_f02140 [Serratia odorifera 4Rx13]
gi|270042193|gb|EFA15289.1| hypothetical protein SOD_f02140 [Serratia odorifera 4Rx13]
Length = 743
Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 650 RIV--DAVWGESYSSGYSLVVRVMANDRSGLLRDITTILANEKVNVLGVASRSDTKKQLA 707
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + K+
Sbjct: 708 TIDMDIEIYNQQVLGRVLAKLNQLPDVIDAKRLH 741
>gi|323452862|gb|EGB08735.1| hypothetical protein AURANDRAFT_71572 [Aureococcus anophagefferens]
Length = 431
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 11/81 (13%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG-SILNSVLEK- 82
+C+VN + G++ + ++ G GINI + + A + + I+ V K
Sbjct: 306 RVCLVNENRPGMLGDILSVFGNSGINITQQM--NTSRGDVAYNVIDIERLENFEDVHFKS 363
Query: 83 -------LSVNVTIRFVKQFE 96
L+ ++ +
Sbjct: 364 WDALQFLLTSMDGVKSTRYIH 384
>gi|157369037|ref|YP_001477026.1| GDP/GTP pyrophosphokinase [Serratia proteamaculans 568]
gi|157320801|gb|ABV39898.1| (p)ppGpp synthetase I, SpoT/RelA [Serratia proteamaculans 568]
Length = 743
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 650 RIV--DAVWGESYSSGYSLVVRVMANDRSGLLRDITTILANEKVNVLGVASRSDTKKQLA 707
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + K+
Sbjct: 708 TIDMDIEIYNQQVLGRVLAKLNQLPDVIDAKRLH 741
>gi|317049302|ref|YP_004116950.1| (p)ppGpp synthetase I SpoT/RelA [Pantoea sp. At-9b]
gi|316950919|gb|ADU70394.1| (p)ppGpp synthetase I, SpoT/RelA [Pantoea sp. At-9b]
Length = 743
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 652 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVSSRSDTRKQLA 709
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL +L+ I ++
Sbjct: 710 TIDMDIEIYNQQVLGRVLARLNQVPDIIDARRLH 743
>gi|90424134|ref|YP_532504.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Rhodopseudomonas palustris BisB18]
gi|90106148|gb|ABD88185.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Rhodopseudomonas palustris BisB18]
Length = 761
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ + N + G + + ++ E+ NI + ++ R + L ID + + L+ LS
Sbjct: 687 RLFVQNVNEPGSLAQIATVIAEHDGNIDNINMSRRSPD---FTELTIDLEVYD--LKHLS 741
Query: 85 VNVTIRFVKQF 95
+ K
Sbjct: 742 AIIAQLRAKAV 752
>gi|269956061|ref|YP_003325850.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Xylanimonas cellulosilytica DSM 15894]
gi|269304742|gb|ACZ30292.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Xylanimonas cellulosilytica DSM 15894]
Length = 413
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + I +++ ++ G++ + + E+G NI L E
Sbjct: 315 VNLPNLQLPPTGVG-RIMVLHRNVPGVLAAINQVFAEHGANIEGQMLAT--RGEIGYVVT 371
Query: 70 CIDGSILNSVLEKLSVNVTIRFVK 93
I +L T ++
Sbjct: 372 DISDVTQRGSSARLMEMPTTVRLR 395
>gi|153005766|ref|YP_001380091.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Anaeromyxobacter sp. Fw109-5]
gi|152029339|gb|ABS27107.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
[Anaeromyxobacter sp. Fw109-5]
Length = 399
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R + + + D +G++ V + E GIN+ + + A + +D +
Sbjct: 321 TPARARLVVRHLDKVGVLANVLGAIREAGINVEGVENTIFEHHQAASCTIDLDERPPAPL 380
Query: 80 LEKLSV-NVTIRFV 92
LE L + FV
Sbjct: 381 LEHLRTRVGDVLFV 394
>gi|85058488|ref|YP_454190.1| GDP/GTP pyrophosphokinase [Sodalis glossinidius str. 'morsitans']
gi|84779008|dbj|BAE73785.1| GTP pyrophosphokinase [Sodalis glossinidius str. 'morsitans']
Length = 744
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDVKKQLA 708
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMDIEIYNQQVLGRVLSKLNQLPDVINARRLH 742
>gi|303273464|ref|XP_003056093.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462177|gb|EEH59469.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 387
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC-IDGSILNSVL 80
+CIVN + G + + LG G+NI+ + + A + + + +
Sbjct: 292 SGARLCIVNRNEPGALGEITTFLGSRGLNISQQI--NTSRGDIAYTVIDFTNQPEDAEAI 349
Query: 81 EK 82
+
Sbjct: 350 QA 351
>gi|317491025|ref|ZP_07949461.1| RelA/SpoT family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920572|gb|EFV41895.1| RelA/SpoT family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 747
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R I + + + + D G++ + IL +N+ + A
Sbjct: 650 RI--IDAVWGESYSSGYSLVVRVMANDRSGLLRDITTILANEKVNVLGVASRSDTKKQLA 707
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L+ VL KL+ + ++
Sbjct: 708 TIDMDIEIYNLQVLSRVLAKLNQLPDVIDARRLH 741
>gi|293392821|ref|ZP_06637139.1| GTP diphosphokinase [Serratia odorifera DSM 4582]
gi|291424680|gb|EFE97891.1| GTP diphosphokinase [Serratia odorifera DSM 4582]
Length = 743
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 650 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTKKQVA 707
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + K+
Sbjct: 708 TIDMDIEIYNQQVLGRVLAKLNQLPDVIDAKRLH 741
>gi|300718122|ref|YP_003742925.1| GTP pyrophosphokinase [Erwinia billingiae Eb661]
gi|299063958|emb|CAX61078.1| GTP pyrophosphokinase [Erwinia billingiae Eb661]
Length = 742
Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVSSRSDTKKQLA 708
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L V+ +L+ I ++
Sbjct: 709 TIDMDIEIYNQQVLGRVIARLNQVPDIIDARRLH 742
>gi|226356667|ref|YP_002786407.1| acetolactate synthase small subunit [Deinococcus deserti VCD115]
gi|226318657|gb|ACO46653.1| putative Acetolactate synthase, small subunit [Deinococcus
deserti VCD115]
Length = 200
Score = 48.1 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
+I I+ D ++ + + G G NI +G ++ + + + D ++
Sbjct: 6 FQPQDHLISILVRDEPRVLTRITALFGRRGYNIRSLSVGNTEHPGVSRMTIVVSGDRGVV 65
Query: 77 NSVLEKLSVNVTIRFV 92
+++L + +
Sbjct: 66 EQAIKQLEKLHDVVRI 81
>gi|222873058|gb|EEF10189.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ ++ + G + L E G NI L +AI+ + + E L
Sbjct: 202 RVLNIHYNRPGTLSHFNQALAEIGANIVAQQLQTEGDIGYAITDISL--VPPAGWAEALM 259
Query: 85 VNVTIRFVKQF 95
+ +
Sbjct: 260 KDDAFIRTRVI 270
>gi|296110562|ref|YP_003620943.1| hypothetical protein LKI_02155 [Leuconostoc kimchii IMSNU 11154]
gi|295832093|gb|ADG39974.1| hypothetical protein LKI_02155 [Leuconostoc kimchii IMSNU 11154]
Length = 392
Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 34/100 (34%), Gaps = 7/100 (7%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ +I+ + I I++ ++ ++ + G+ INI L
Sbjct: 296 GNIINSVNYPDIDEPFT-TKYRIGIIHENVPNMISQISKFFGDNNINIE--QLSNRAVGA 352
Query: 64 HAISFLCIDG--SILNS-VLEKLSVNVTIRFV-KQFEFNV 99
+A + + I+ + + V L + + N+
Sbjct: 353 YAYTLVAINEFNEVQQAYVKTALDEIPHVILTRRYVNVNI 392
>gi|45329|emb|CAA46167.1| homoserine dehydrogenase [Pseudomonas aeruginosa PAO1]
Length = 439
Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 24/91 (26%), Gaps = 10/91 (10%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V IL E GINI + L
Sbjct: 349 PIEACESAYYLRIQAKDHPGVLAQVATILSERGINIESIMQKEAEEQDGLVPMILVTHHV 408
Query: 75 ILN---SVLEKLSVNVTI------RFVKQFE 96
I + L + V+Q
Sbjct: 409 IEQRINDAIAALEALEGVSGPVVRIRVEQLN 439
>gi|170289881|ref|YP_001736697.1| hydrocarbon binding protein [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170173961|gb|ACB07014.1| Predicted hydrocarbon binding protein (contains V4R domain)
[Candidatus Korarchaeum cryptofilum OPF8]
Length = 270
Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 26/82 (31%), Gaps = 8/82 (9%)
Query: 19 VDIGRLMICIV---NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
V G+ ++ + D GI+ V L G+NI + + ++
Sbjct: 20 VSPGKNLLIFYLEISRDRPGILAEVTRELSSRGVNI--IRNSTQVEGGKGLIMIIVERPD 77
Query: 76 L---NSVLEKLSVNVTIRFVKQ 94
+ + L I V+
Sbjct: 78 DVNIEELKKHLESIEGIESVEY 99
>gi|319789117|ref|YP_004150750.1| (p)ppGpp synthetase I, SpoT/RelA [Thermovibrio ammonificans HB-1]
gi|317113619|gb|ADU96109.1| (p)ppGpp synthetase I, SpoT/RelA [Thermovibrio ammonificans HB-1]
Length = 717
Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 31/90 (34%), Gaps = 4/90 (4%)
Query: 8 RFIKIQEINFDVD-IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
+ +++ + D ++ I ++ D G++ + + ++ INI
Sbjct: 620 KVVRVDFLPTDRTYPAKVRISVI--DQPGMLAAITATVAKHNINIRDLTTKLVSGRGVID 677
Query: 67 SFLCI-DGSILNSVLEKLSVNVTIRFVKQF 95
L + L +L L + K+
Sbjct: 678 LLLDVRSREELQQLLNALRSIKGVITAKRI 707
>gi|149919786|ref|ZP_01908263.1| D-3-phosphoglycerate dehydrogenase [Plesiocystis pacifica SIR-1]
gi|149819393|gb|EDM78824.1| D-3-phosphoglycerate dehydrogenase [Plesiocystis pacifica SIR-1]
Length = 405
Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ GR + ++ D+ G++ + + G+NI L + + +D +
Sbjct: 325 ISPGRSRLLNIHRDVPGVLTSANQRVSDAGLNITGQRLETQA--GVGLLLMDVDAKSDDP 382
Query: 79 VLEKLSV 85
+E L
Sbjct: 383 RVESLRA 389
>gi|304408283|ref|ZP_07389931.1| acetolactate synthase, small subunit [Paenibacillus
curdlanolyticus YK9]
gi|304342752|gb|EFM08598.1| acetolactate synthase, small subunit [Paenibacillus
curdlanolyticus YK9]
Length = 212
Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ D G++ V + G G NI +G S+ + + D +++ + +
Sbjct: 8 HTIAVLVQDQPGVLQRVSGLFGRRGFNINSITVGSSEEPGLSRMIITTSGDDAMIEQIQK 67
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 68 QLYKLIDVIQVRVIS 82
>gi|188534843|ref|YP_001908640.1| GDP/GTP pyrophosphokinase [Erwinia tasmaniensis Et1/99]
gi|188029885|emb|CAO97769.1| GTP pyrophosphokinase [Erwinia tasmaniensis Et1/99]
Length = 744
Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 653 RIV--DAVWGETYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVSSHSETKKQLA 710
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L+ VL +L+ I ++
Sbjct: 711 TIDMDIEIYNQQVLSRVLARLNQVPDIIDARRLH 744
>gi|91977118|ref|YP_569777.1| RelA/SpoT family protein [Rhodopseudomonas palustris BisB5]
gi|91683574|gb|ABE39876.1| RelA/SpoT family protein [Rhodopseudomonas palustris BisB5]
Length = 762
Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ + N + G + + +++ E+ NI + ++ R + L ID + + L+ LS
Sbjct: 688 RLFLQNVNEPGSLAQIASVIAEHDGNIDNINMSRRSPD---FTELTIDLEVYD--LKHLS 742
Query: 85 VNVTIRFVKQF 95
+ K
Sbjct: 743 AIIAQLRAKAV 753
>gi|292487221|ref|YP_003530093.1| GTP pyrophosphokinase [Erwinia amylovora CFBP1430]
gi|291552640|emb|CBA19685.1| GTP pyrophosphokinase [Erwinia amylovora CFBP1430]
Length = 749
Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 658 RIV--DAVWGETYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVSSHSDTKRQLA 715
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L+ VL +L+ I K+
Sbjct: 716 TIDMDIEIYNQQVLSRVLARLNQVPDIIDAKRLH 749
>gi|292900404|ref|YP_003539773.1| GTP pyrophosphokinase [Erwinia amylovora ATCC 49946]
gi|291200252|emb|CBJ47380.1| GTP pyrophosphokinase [Erwinia amylovora ATCC 49946]
gi|312171322|emb|CBX79581.1| GTP pyrophosphokinase [Erwinia amylovora ATCC BAA-2158]
Length = 744
Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 653 RIV--DAVWGETYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVSSHSDTKRQLA 710
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L+ VL +L+ I K+
Sbjct: 711 TIDMDIEIYNQQVLSRVLARLNQVPDIIDAKRLH 744
>gi|283479540|emb|CAY75456.1| GTP pyrophosphokinase [Erwinia pyrifoliae DSM 12163]
Length = 749
Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 658 RIV--DAVWGETYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVSSHSDTKRQLA 715
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L+ VL +L+ I K+
Sbjct: 716 TIDMDIEIYNQQVLSRVLARLNQVPDIIDAKRLH 749
>gi|310766626|gb|ADP11576.1| GDP/GTP pyrophosphokinase [Erwinia sp. Ejp617]
Length = 744
Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 653 RIV--DAVWGETYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVSSHSDTKRQLA 710
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L+ VL +L+ I K+
Sbjct: 711 TIDMDIEIYNQQVLSRVLARLNQVPDIIDAKRLH 744
>gi|259909467|ref|YP_002649823.1| GDP/GTP pyrophosphokinase [Erwinia pyrifoliae Ep1/96]
gi|224965089|emb|CAX56621.1| GTP pyrophosphokinase [Erwinia pyrifoliae Ep1/96]
Length = 744
Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 653 RIV--DAVWGETYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVSSHSDTKRQLA 710
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L+ VL +L+ I K+
Sbjct: 711 TIDMDIEIYNQQVLSRVLARLNQVPDIIDAKRLH 744
>gi|308803843|ref|XP_003079234.1| COG0111: Phosphoglycerate dehydrogenase and related dehydrogenases
(ISS) [Ostreococcus tauri]
gi|116057689|emb|CAL53892.1| COG0111: Phosphoglycerate dehydrogenase and related dehydrogenases
(ISS) [Ostreococcus tauri]
Length = 272
Score = 47.7 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 5/77 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI--LNSV 79
+CIVN + G + + LG G NI + A + + ++ ++
Sbjct: 174 SGARLCIVNKNEAGALGEITTFLGTQGCNI--LQQINTSRDGIAYTVIDLEKIPADPAAL 231
Query: 80 LEKLSVN-VTIRFVKQF 95
+ L+ + +
Sbjct: 232 QDALAKTCPMVVSSRFI 248
>gi|327395010|dbj|BAK12432.1| GTP pyrophosphokinase RelA [Pantoea ananatis AJ13355]
Length = 743
Score = 47.7 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 652 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVSSRSDTKKQLA 709
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL +L+ I ++
Sbjct: 710 TIDMDIEIYNHQVLGRVLSRLNQVPDIIDARRLH 743
>gi|291618631|ref|YP_003521373.1| RelA [Pantoea ananatis LMG 20103]
gi|291153661|gb|ADD78245.1| RelA [Pantoea ananatis LMG 20103]
Length = 743
Score = 47.7 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 652 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVSSRSDTKKQLA 709
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL +L+ I ++
Sbjct: 710 TIDMDIEIYNHQVLGRVLSRLNQVPDIIDARRLH 743
>gi|163749106|ref|ZP_02156356.1| D-3-phosphoglycerate dehydrogenase [Shewanella benthica KT99]
gi|161331176|gb|EDQ02065.1| D-3-phosphoglycerate dehydrogenase [Shewanella benthica KT99]
Length = 60
Score = 47.7 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 49 INIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
INIA H + E + +D + LE+L +
Sbjct: 13 INIACQHQCLQTTAEIGYVVMEVDSNQAEEALEQLKAIEGTIRTRLLH 60
>gi|320540555|ref|ZP_08040205.1| putative truncated (p)ppGpp synthetase I/GTP pyrophosphokinase
[Serratia symbiotica str. Tucson]
gi|320029486|gb|EFW11515.1| putative truncated (p)ppGpp synthetase I/GTP pyrophosphokinase
[Serratia symbiotica str. Tucson]
Length = 601
Score = 47.3 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 508 RIV--DAVWGESYSSGYALVVRVMANDRSGLLRDITTILANEKVNVLGVASRSDTKKQLA 565
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L+ VL KL+ + K+
Sbjct: 566 TIDMDIEIYNQLVLSRVLAKLNQLPDVIDAKRLH 599
>gi|238797164|ref|ZP_04640666.1| GTP pyrophosphokinase [Yersinia mollaretii ATCC 43969]
gi|238719011|gb|EEQ10825.1| GTP pyrophosphokinase [Yersinia mollaretii ATCC 43969]
Length = 744
Score = 47.3 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 30/94 (31%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ A
Sbjct: 651 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTKKMMA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMDIEIYNLQVLGRVLAKLNQLPDVIDARRLH 742
>gi|326803687|ref|YP_004321505.1| 4-phosphoerythronate dehydrogenase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651626|gb|AEA01809.1| 4-phosphoerythronate dehydrogenase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 394
Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Query: 16 NFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--D 72
N ++ + I+N +I +V + L + INI +A + + + D
Sbjct: 306 NVEMTFNAPLRLSIINENIPNMVAGISRYLADEDINIEKII--NKSRGNYAYTLVDVSGD 363
Query: 73 GSILN--SVLEKLSVNVTIRFVKQFE 96
+ + +E + I+ ++ +
Sbjct: 364 DLLSKVNTFMEDVRSVKGIKKIRMIQ 389
>gi|238758180|ref|ZP_04619359.1| GTP pyrophosphokinase [Yersinia aldovae ATCC 35236]
gi|238703510|gb|EEP96048.1| GTP pyrophosphokinase [Yersinia aldovae ATCC 35236]
Length = 736
Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 30/94 (31%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ A
Sbjct: 643 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTKKMMA 700
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 701 TIDMDIEIYNLQVLGRVLAKLNQLPDVIDARRLH 734
>gi|123441099|ref|YP_001005088.1| GDP/GTP pyrophosphokinase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088060|emb|CAL10848.1| GTP pyrophosphokinase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 744
Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 30/94 (31%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ A
Sbjct: 651 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTKKMMA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMDIEIYNLQVLGRVLAKLNQLPDVIDARRLH 742
>gi|332160481|ref|YP_004297058.1| GDP/GTP pyrophosphokinase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318607053|emb|CBY28551.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664711|gb|ADZ41355.1| GDP/GTP pyrophosphokinase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330859217|emb|CBX69568.1| GTP pyrophosphokinase [Yersinia enterocolitica W22703]
Length = 744
Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 30/94 (31%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ A
Sbjct: 651 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTKKMMA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMDIEIYNLQVLGRVLAKLNQLPDVIDARRLH 742
>gi|294637604|ref|ZP_06715884.1| GTP diphosphokinase [Edwardsiella tarda ATCC 23685]
gi|291089234|gb|EFE21795.1| GTP diphosphokinase [Edwardsiella tarda ATCC 23685]
Length = 748
Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R I + + + + D G++ + IL +N+ + A
Sbjct: 650 RI--IDAVWGESYSSGYALVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTKQQMA 707
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 708 TIDMEIEIYNLQVLGRVLAKLNQLPDVLDARRLN 741
>gi|169831343|ref|YP_001717325.1| prephenate dehydrogenase [Candidatus Desulforudis audaxviator
MP104C]
gi|169638187|gb|ACA59693.1| Prephenate dehydrogenase [Candidatus Desulforudis audaxviator
MP104C]
Length = 364
Score = 47.3 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 24/66 (36%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I +D G + V +ILG + INI+ + R + E L +L
Sbjct: 294 HEVTITISDRPGTIAAVASILGRHEINISDLEILRVREGEGGTVRLAFGTEHDRDRAAEL 353
Query: 84 SVNVTI 89
I
Sbjct: 354 LAREGI 359
>gi|238750560|ref|ZP_04612060.1| GTP pyrophosphokinase [Yersinia rohdei ATCC 43380]
gi|238711208|gb|EEQ03426.1| GTP pyrophosphokinase [Yersinia rohdei ATCC 43380]
Length = 736
Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 30/94 (31%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ A
Sbjct: 643 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTKKMLA 700
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 701 TIDMDIEIYNLQVLGRVLAKLNQLPDVIDARRLH 734
>gi|194291426|ref|YP_002007333.1| d-3-phosphoglycerate dehydrogenase [Cupriavidus taiwanensis LMG
19424]
gi|193225330|emb|CAQ71274.1| D-3-phosphoglycerate dehydrogenase [Cupriavidus taiwanensis LMG
19424]
Length = 423
Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 28/94 (29%), Gaps = 6/94 (6%)
Query: 4 DGKPRFIKIQEINFDVDI--GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
G + D + V+ + G + + +L + G+NI HL
Sbjct: 329 GGTIGAVNFP--EVDPGPLHAPARLLNVHGNAPGALAALNTLLAQEGVNITGQHL--QTR 384
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + +++ L + +
Sbjct: 385 GHTGYVVTDLDRAPSEQLMQALRTHAGFARSRLI 418
>gi|259048099|ref|ZP_05738500.1| acetoin utilization protein AcuB [Granulicatella adiacens ATCC
49175]
gi|259035160|gb|EEW36415.1| acetoin utilization protein AcuB [Granulicatella adiacens ATCC
49175]
Length = 213
Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
FI+I N G + +N D G + + ++L E +N++ +
Sbjct: 131 FIEISGYN---TPGSRLFIEINEDKPGPLEEISDVLRENNVNVSTISVYH--RDGKVQVV 185
Query: 69 LCIDGSILNSVLEKLSV 85
L +D + + V + ++
Sbjct: 186 LHVDSTNPDEVADFIAQ 202
>gi|238791236|ref|ZP_04634875.1| GTP pyrophosphokinase [Yersinia intermedia ATCC 29909]
gi|238729369|gb|EEQ20884.1| GTP pyrophosphokinase [Yersinia intermedia ATCC 29909]
Length = 744
Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 30/94 (31%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ A
Sbjct: 651 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTKKMVA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMDIEIYNLQVLGRVLAKLNQLPDVIDARRLH 742
>gi|238761636|ref|ZP_04622611.1| GTP pyrophosphokinase [Yersinia kristensenii ATCC 33638]
gi|238700150|gb|EEP92892.1| GTP pyrophosphokinase [Yersinia kristensenii ATCC 33638]
Length = 744
Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 30/94 (31%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ A
Sbjct: 651 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTKKMVA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMDIEIYNLQVLGRVLAKLNQLPDVIDARRLH 742
>gi|315604438|ref|ZP_07879504.1| D-3-phosphoglycerate dehydrogenase [Actinomyces sp. oral taxon 180
str. F0310]
gi|315314144|gb|EFU62195.1| D-3-phosphoglycerate dehydrogenase [Actinomyces sp. oral taxon 180
str. F0310]
Length = 401
Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 10 IKIQEINFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ + + + R + +++ ++ G++ V I N+ L +A++
Sbjct: 315 VNLPNLTMNSAPRSRYRVRLIHRNVPGVMARVNQIFASSQANVDAQILATVDEVGYALT- 373
Query: 69 LCIDGSILNSVLEKLSVNVTIRF 91
I + LE+L+
Sbjct: 374 -DISAGLGRGALEELAHMPETVR 395
>gi|22124724|ref|NP_668147.1| GDP/GTP pyrophosphokinase [Yersinia pestis KIM 10]
gi|45440165|ref|NP_991704.1| GDP/GTP pyrophosphokinase [Yersinia pestis biovar Microtus str.
91001]
gi|51595101|ref|YP_069292.1| GDP/GTP pyrophosphokinase [Yersinia pseudotuberculosis IP 32953]
gi|108808868|ref|YP_652784.1| GDP/GTP pyrophosphokinase [Yersinia pestis Antiqua]
gi|108810878|ref|YP_646645.1| GDP/GTP pyrophosphokinase [Yersinia pestis Nepal516]
gi|145600237|ref|YP_001164313.1| GDP/GTP pyrophosphokinase [Yersinia pestis Pestoides F]
gi|153949337|ref|YP_001402276.1| GDP/GTP pyrophosphokinase [Yersinia pseudotuberculosis IP 31758]
gi|153997577|ref|ZP_02022677.1| GTP pyrophosphokinase [Yersinia pestis CA88-4125]
gi|165925827|ref|ZP_02221659.1| GTP pyrophosphokinase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165936651|ref|ZP_02225218.1| GTP pyrophosphokinase [Yersinia pestis biovar Orientalis str.
IP275]
gi|166010084|ref|ZP_02230982.1| GTP pyrophosphokinase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166214061|ref|ZP_02240096.1| GTP pyrophosphokinase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398914|ref|ZP_02304438.1| GTP pyrophosphokinase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167420654|ref|ZP_02312407.1| GTP pyrophosphokinase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423264|ref|ZP_02315017.1| GTP pyrophosphokinase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170025664|ref|YP_001722169.1| GDP/GTP pyrophosphokinase [Yersinia pseudotuberculosis YPIII]
gi|186894114|ref|YP_001871226.1| GDP/GTP pyrophosphokinase [Yersinia pseudotuberculosis PB1/+]
gi|218930397|ref|YP_002348272.1| GDP/GTP pyrophosphokinase [Yersinia pestis CO92]
gi|229839013|ref|ZP_04459172.1| GTP pyrophosphokinase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229896492|ref|ZP_04511660.1| GTP pyrophosphokinase [Yersinia pestis Pestoides A]
gi|229899579|ref|ZP_04514720.1| GTP pyrophosphokinase [Yersinia pestis biovar Orientalis str. India
195]
gi|229901087|ref|ZP_04516210.1| GTP pyrophosphokinase [Yersinia pestis Nepal516]
gi|270489267|ref|ZP_06206341.1| GTP diphosphokinase [Yersinia pestis KIM D27]
gi|294505086|ref|YP_003569148.1| GTP pyrophosphokinase [Yersinia pestis Z176003]
gi|21957540|gb|AAM84398.1|AE013683_11 (p)ppGpp synthetase I (GTP pyrophosphokinase) [Yersinia pestis KIM
10]
gi|45435021|gb|AAS60581.1| GTP pyrophosphokinase [Yersinia pestis biovar Microtus str. 91001]
gi|51588383|emb|CAH19991.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Yersinia
pseudotuberculosis IP 32953]
gi|108774526|gb|ABG17045.1| GTP pyrophosphokinase [Yersinia pestis Nepal516]
gi|108780781|gb|ABG14839.1| GTP pyrophosphokinase [Yersinia pestis Antiqua]
gi|115349008|emb|CAL21969.1| GTP pyrophosphokinase [Yersinia pestis CO92]
gi|145211933|gb|ABP41340.1| GTP pyrophosphokinase [Yersinia pestis Pestoides F]
gi|149289214|gb|EDM39294.1| GTP pyrophosphokinase [Yersinia pestis CA88-4125]
gi|152960832|gb|ABS48293.1| GTP pyrophosphokinase [Yersinia pseudotuberculosis IP 31758]
gi|165915300|gb|EDR33910.1| GTP pyrophosphokinase [Yersinia pestis biovar Orientalis str.
IP275]
gi|165922439|gb|EDR39616.1| GTP pyrophosphokinase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165990991|gb|EDR43292.1| GTP pyrophosphokinase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204692|gb|EDR49172.1| GTP pyrophosphokinase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166961460|gb|EDR57481.1| GTP pyrophosphokinase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051418|gb|EDR62826.1| GTP pyrophosphokinase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057434|gb|EDR67180.1| GTP pyrophosphokinase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169752198|gb|ACA69716.1| (p)ppGpp synthetase I, SpoT/RelA [Yersinia pseudotuberculosis
YPIII]
gi|186697140|gb|ACC87769.1| (p)ppGpp synthetase I, SpoT/RelA [Yersinia pseudotuberculosis
PB1/+]
gi|229681812|gb|EEO77905.1| GTP pyrophosphokinase [Yersinia pestis Nepal516]
gi|229687071|gb|EEO79146.1| GTP pyrophosphokinase [Yersinia pestis biovar Orientalis str. India
195]
gi|229695379|gb|EEO85426.1| GTP pyrophosphokinase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229700566|gb|EEO88597.1| GTP pyrophosphokinase [Yersinia pestis Pestoides A]
gi|262363146|gb|ACY59867.1| GTP pyrophosphokinase [Yersinia pestis D106004]
gi|262367076|gb|ACY63633.1| GTP pyrophosphokinase [Yersinia pestis D182038]
gi|270337771|gb|EFA48548.1| GTP diphosphokinase [Yersinia pestis KIM D27]
gi|294355545|gb|ADE65886.1| GTP pyrophosphokinase [Yersinia pestis Z176003]
gi|320016578|gb|ADW00150.1| GTP pyrophosphokinase [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 744
Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 30/94 (31%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ A
Sbjct: 651 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTKKMVA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMDIEIYNLQVLGRVLAKLNQLPDVIDARRLH 742
>gi|238920898|ref|YP_002934413.1| GDP/GTP pyrophosphokinase [Edwardsiella ictaluri 93-146]
gi|238870467|gb|ACR70178.1| RelA/SpoT family protein [Edwardsiella ictaluri 93-146]
Length = 748
Score = 47.0 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R I + + + + D G++ + IL +N+ + A
Sbjct: 650 RI--IDAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTRQQMA 707
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 708 TIDMEIEIYNLQVLGRVLAKLNQLPDVLDARRLN 741
>gi|238786793|ref|ZP_04630594.1| GTP pyrophosphokinase [Yersinia frederiksenii ATCC 33641]
gi|238725161|gb|EEQ16800.1| GTP pyrophosphokinase [Yersinia frederiksenii ATCC 33641]
Length = 744
Score = 47.0 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 30/94 (31%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ A
Sbjct: 651 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTKKMVA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMDIEIYNLQVLGRVLAKLNQLPDVIDARRLH 742
>gi|315639922|ref|ZP_07895053.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
italicus DSM 15952]
gi|315484347|gb|EFU74812.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
italicus DSM 15952]
Length = 393
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 8/90 (8%), Positives = 31/90 (34%), Gaps = 6/90 (6%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ +++ + + + D I + ++ + I I L + + + +
Sbjct: 297 VNFPDVSLPFH-APIRLTLFYKDYPHIFTHLSKLISHFDIEID--ILTSDRKNGYVYTLI 353
Query: 70 CIDGSILNSV---LEKLSVNVTIRFVKQFE 96
+D V ++ + N + ++ +
Sbjct: 354 DLDEDDFEKVQRLVQAIKNNTDVIRIRTLK 383
>gi|289548724|ref|YP_003473712.1| acetolactate synthase, small subunit [Thermocrinis albus DSM 14484]
gi|289182341|gb|ADC89585.1| acetolactate synthase, small subunit [Thermocrinis albus DSM 14484]
Length = 191
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ ++ + LG++ + ++ G NI +G + ++ + + D ++ V++
Sbjct: 29 HILSVLVRNELGVLARIATLIAGKGYNIEGLSVGETHEKGLSLMTIEVIGDDVVIEQVVK 88
Query: 82 KLSVNVTIRFVKQFE 96
+L + V+
Sbjct: 89 QLRKLIDTLKVRDLT 103
>gi|86158972|ref|YP_465757.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Anaeromyxobacter dehalogenans 2CP-C]
gi|85775483|gb|ABC82320.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 746
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLSVNVT 88
D GI+ + E G+NI+ R+ E A++ + D LNSV+ +
Sbjct: 681 DRPGILAKISQTFSEAGVNIS-QASCRTTPGERAVNDFEVTIGDLKQLNSVIRSIERIEG 739
Query: 89 IRFVKQF 95
++ V++
Sbjct: 740 VQSVQRV 746
>gi|269140059|ref|YP_003296760.1| GDP/GTP pyrophosphokinase [Edwardsiella tarda EIB202]
gi|267985720|gb|ACY85549.1| GDP/GTP pyrophosphokinase [Edwardsiella tarda EIB202]
gi|304559887|gb|ADM42551.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Edwardsiella tarda
FL6-60]
Length = 748
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R I + + + + D G++ + IL +N+ + A
Sbjct: 650 RI--IDAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTKQQMA 707
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 708 TIDMEIEIYNLQVLGRVLAKLNQLPDVLDARRLN 741
>gi|300173551|ref|YP_003772717.1| D-3-phosphoglycerate dehydrogenase [Leuconostoc gasicomitatum LMG
18811]
gi|299887930|emb|CBL91898.1| D-3-phosphoglycerate dehydrogenase [Leuconostoc gasicomitatum LMG
18811]
Length = 392
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 32/93 (34%), Gaps = 6/93 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ +I+ + I + + I++ ++ ++ + G+ INI L
Sbjct: 296 GNIINSVNYPDID-EPFITKYRVGIIHENVPNMISQISKFFGDNDINIE--QLSNRAVGA 352
Query: 64 HAISFLCIDGSIL---NSVLEKLSVNVTIRFVK 93
+A + + I+ V L + +
Sbjct: 353 YAYTLVAINDFSDTQQEYVKTALDDIPHVILTR 385
>gi|197121709|ref|YP_002133660.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter sp. K]
gi|220916506|ref|YP_002491810.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter dehalogenans
2CP-1]
gi|196171558|gb|ACG72531.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter sp. K]
gi|219954360|gb|ACL64744.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter dehalogenans
2CP-1]
Length = 746
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLSVNVT 88
D GI+ + E G+NI+ R+ E A++ + D LNSV+ +
Sbjct: 681 DRPGILAKISQTFSEAGVNIS-QASCRTTPGERAVNDFEVTIGDLKQLNSVIRSIERIEG 739
Query: 89 IRFVKQF 95
++ V++
Sbjct: 740 VQSVQRV 746
>gi|86749726|ref|YP_486222.1| (p)ppGpp synthetase I [Rhodopseudomonas palustris HaA2]
gi|86572754|gb|ABD07311.1| (p)ppGpp synthetase I [Rhodopseudomonas palustris HaA2]
Length = 761
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ + N + G + + ++ E+ NI + ++ R + L ID + + L+ LS
Sbjct: 687 RLFVQNVNEPGSLAQIAGVIAEHDGNIDNINMSRRSPD---FTELTIDLEVYD--LKHLS 741
Query: 85 VNVTIRFVKQF 95
+ K
Sbjct: 742 AIIAQLRAKAV 752
>gi|121535416|ref|ZP_01667227.1| MgtC/SapB transporter [Thermosinus carboxydivorans Nor1]
gi|121306015|gb|EAX46946.1| MgtC/SapB transporter [Thermosinus carboxydivorans Nor1]
Length = 221
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI----DGSILNSVL 80
+ + D G + +G+ LG++ ++I + H++ + D +N V+
Sbjct: 147 TLLLSIVDKPGQIGKIGSYLGQHCVSIRDIRIEEHDDHGHSLLVTLMLHFPDRVNVNEVI 206
Query: 81 EKLSVNVTIRFVK 93
L + VK
Sbjct: 207 ANLMAIDGVMAVK 219
>gi|315127391|ref|YP_004069394.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Pseudoalteromonas
sp. SM9913]
gi|315015905|gb|ADT69243.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Pseudoalteromonas
sp. SM9913]
Length = 718
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I I +D G++ + + L +N+ + ++ ST+ AI + I D N VL
Sbjct: 644 TIRIEASDRSGLIRDISSALANEKVNVLNMNVNTVDSTQTAIFVMQIEVHDLQGTNKVLS 703
Query: 82 KLSVNVTIRFVK 93
KL + K
Sbjct: 704 KLHQIEGVHSAK 715
>gi|86159382|ref|YP_466167.1| NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
[Anaeromyxobacter dehalogenans 2CP-C]
gi|85775893|gb|ABC82730.1| NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 399
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ + + D +G++ V ++ E GIN A + +D V+ ++
Sbjct: 326 RLVVRHVDRVGVIANVMALIREAGINAQEIRNTVFDEAVAASCAIDLDERPPEDVVNRIR 385
Query: 85 V-NVTIRFV 92
I FV
Sbjct: 386 ARADEILFV 394
>gi|322831387|ref|YP_004211414.1| (p)ppGpp synthetase I, SpoT/RelA [Rahnella sp. Y9602]
gi|321166588|gb|ADW72287.1| (p)ppGpp synthetase I, SpoT/RelA [Rahnella sp. Y9602]
Length = 745
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 28/90 (31%), Gaps = 5/90 (5%)
Query: 12 IQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + + + D G++ + IL +N+ + A +
Sbjct: 654 VDAVWGESYSSGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTRQQLATIDM 713
Query: 70 CIDGSILN---SVLEKLSVNVTIRFVKQFE 96
I+ V+ KL+ + K+
Sbjct: 714 DIEIYNPQVLGRVIAKLNQLPDVIEAKRLH 743
>gi|86158400|ref|YP_465185.1| acetolactate synthase, small subunit [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85774911|gb|ABC81748.1| acetolactate synthase, small subunit [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 178
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILN 77
I ++ + G++ + + G NIA +G ++ E++ + + S ++
Sbjct: 10 SGSTHTISLLVENKPGVLHRIAGLFSRRGYNIASLTVGPTERAEYSRMTIVVRLSSSPVD 69
Query: 78 SVLEKLSVNVTIRFVKQFE 96
V+ ++ V + V++
Sbjct: 70 QVVRQVQKLVPVVEVRELS 88
>gi|314923460|gb|EFS87291.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL001PA1]
Length = 396
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I EI I ++ ++ G++ + ++ + G N+ + L E L
Sbjct: 315 VNIPEIT-PSPRTGARIGHLHRNVPGVMATLNRLVADQGGNVTYQALAT--KGELGYCIL 371
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I + +L ++ +
Sbjct: 372 DI-AETDSGLLANVTDLEGTIRARIL 396
>gi|314966504|gb|EFT10603.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL082PA2]
gi|315092976|gb|EFT64952.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL060PA1]
gi|327327329|gb|EGE69105.1| D-3-phosphoglycerate dehydrogenase [Propionibacterium acnes
HL103PA1]
Length = 396
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I EI I ++ ++ G++ + ++ + G N+ + L E L
Sbjct: 315 VNIPEIT-PSPRTGARIGHLHRNVPGVMATLNRLVADQGGNVTYQALAT--KGELGYCIL 371
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I + +L ++ +
Sbjct: 372 DI-AETDSGLLANVTDLEGTIRARIL 396
>gi|315080383|gb|EFT52359.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL078PA1]
gi|327329896|gb|EGE71650.1| D-3-phosphoglycerate dehydrogenase [Propionibacterium acnes
HL097PA1]
Length = 396
Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I EI I ++ ++ G++ + ++ + G N+ + L E L
Sbjct: 315 VNIPEIT-PSPRTGARIGHLHRNVPGVMATLNRLVADQGGNVTYQALAT--KGELGYCIL 371
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I + +L ++ +
Sbjct: 372 DI-AETDSGLLANVTDLEGTIRARIL 396
>gi|153004178|ref|YP_001378503.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter sp. Fw109-5]
gi|152027751|gb|ABS25519.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter sp. Fw109-5]
Length = 738
Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLSVNVT 88
D GI+ + I E G+NI+ R+ E A++ + D LNSV+ L
Sbjct: 673 DRPGILAKISQIFSEAGLNIS-QASCRTTPGERAVNDFEVTVGDLKQLNSVIRNLERIEG 731
Query: 89 IRFV 92
++ V
Sbjct: 732 VQSV 735
>gi|282853769|ref|ZP_06263106.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
J139]
gi|282583222|gb|EFB88602.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
J139]
gi|314981428|gb|EFT25522.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL110PA3]
gi|315092093|gb|EFT64069.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL110PA4]
Length = 396
Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I EI I ++ ++ G++ + ++ + G N+ + L E L
Sbjct: 315 VNIPEIT-PSPRTGARIGHLHRNVPGVMATLNRLVADQGGNVTYQALAT--KGELGYCIL 371
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I + +L ++ +
Sbjct: 372 DI-AETDSGLLANVTDLEGTIRARIL 396
>gi|238754499|ref|ZP_04615854.1| GTP pyrophosphokinase [Yersinia ruckeri ATCC 29473]
gi|238707328|gb|EEP99690.1| GTP pyrophosphokinase [Yersinia ruckeri ATCC 29473]
Length = 744
Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 30/94 (31%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ A
Sbjct: 651 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTKKMLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMNIEIYNLQVLGRVLAKLNQLPDVIDARRLH 742
>gi|304399229|ref|ZP_07381096.1| (p)ppGpp synthetase I, SpoT/RelA [Pantoea sp. aB]
gi|304353283|gb|EFM17663.1| (p)ppGpp synthetase I, SpoT/RelA [Pantoea sp. aB]
Length = 743
Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 652 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVSSRSDTKKQLA 709
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL +L+ I ++
Sbjct: 710 TIDMDIEIYNHQVLGRVLARLNQVSDIIDARRLH 743
>gi|115525032|ref|YP_781943.1| (p)ppGpp synthetase I, SpoT/RelA [Rhodopseudomonas palustris
BisA53]
gi|115518979|gb|ABJ06963.1| (p)ppGpp synthetase I, SpoT/RelA [Rhodopseudomonas palustris
BisA53]
Length = 759
Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ + N + G + + ++ E+ NI + ++ R + L ID + + L+ LS
Sbjct: 685 RLFVQNVNEPGSLAQIAGVIAEHDGNIDNINMSRRSPD---FTELTIDLEVYD--LKHLS 739
Query: 85 VNVTIRFVKQF 95
+ K
Sbjct: 740 AIIAQLRAKAV 750
>gi|295130832|ref|YP_003581495.1| phosphoglycerate dehydrogenase [Propionibacterium acnes SK137]
gi|291375257|gb|ADD99111.1| phosphoglycerate dehydrogenase [Propionibacterium acnes SK137]
gi|313772085|gb|EFS38051.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL074PA1]
gi|313810283|gb|EFS48004.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL083PA1]
gi|313830613|gb|EFS68327.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL007PA1]
gi|313833651|gb|EFS71365.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL056PA1]
gi|314973615|gb|EFT17711.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL053PA1]
gi|314975837|gb|EFT19932.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL045PA1]
gi|314983685|gb|EFT27777.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL005PA1]
gi|315095889|gb|EFT67865.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL038PA1]
gi|327326440|gb|EGE68230.1| D-3-phosphoglycerate dehydrogenase [Propionibacterium acnes
HL096PA2]
gi|327445665|gb|EGE92319.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL043PA2]
gi|327448352|gb|EGE95006.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL043PA1]
gi|328760868|gb|EGF74433.1| D-3-phosphoglycerate dehydrogenase [Propionibacterium acnes
HL099PA1]
Length = 396
Score = 46.2 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I EI I ++ ++ G++ + ++ + G N+ + L E L
Sbjct: 315 VNIPEIT-PSPRTGARIGHLHRNVPGVMATLNRLVADQGGNVTYQALAT--KGELGYCIL 371
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I + +L ++ +
Sbjct: 372 DI-AETDSGLLANVTDLEGTIRARIL 396
>gi|288817953|ref|YP_003432300.1| acetolactate synthase small subunit [Hydrogenobacter thermophilus
TK-6]
gi|288787352|dbj|BAI69099.1| acetolactate synthase small subunit [Hydrogenobacter thermophilus
TK-6]
gi|308751551|gb|ADO45034.1| acetolactate synthase, small subunit [Hydrogenobacter
thermophilus TK-6]
Length = 189
Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + LG++ + ++ G NI +G + + + + D +++ V++
Sbjct: 23 HIITLLVRNELGVLARIATLIAGKGYNIEGLSVGETHEKGLSRMTIEVIGDDVVIDQVVK 82
Query: 82 KLSVNVTIRFVKQFE 96
+L + V+
Sbjct: 83 QLRKLIDTIKVRDLT 97
>gi|308187943|ref|YP_003932074.1| GTP pyrophosphokinase [Pantoea vagans C9-1]
gi|308058453|gb|ADO10625.1| GTP pyrophosphokinase [Pantoea vagans C9-1]
Length = 743
Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 652 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVSSRSDTKKQLA 709
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL +L+ I ++
Sbjct: 710 TIDMDIEIYNHQVLGRVLARLNQVSDIIDARRLH 743
>gi|78043291|ref|YP_359376.1| acetolactate synthase 3 regulatory subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995406|gb|ABB14305.1| acetolactate synthase, small subunit [Carboxydothermus
hydrogenoformans Z-2901]
Length = 170
Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +GR+++ + + + + D +L V++
Sbjct: 3 HTLAVLVENNPGVLARVAGLFSRRGYNIDSLAVGRTENPDISRMTIVVEGDDRVLEQVVK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L V + V+
Sbjct: 63 QLRKLVDVIKVQDIT 77
>gi|316934148|ref|YP_004109130.1| (p)ppGpp synthetase I SpoT/RelA [Rhodopseudomonas palustris DX-1]
gi|315601862|gb|ADU44397.1| (p)ppGpp synthetase I, SpoT/RelA [Rhodopseudomonas palustris DX-1]
Length = 760
Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SV 79
+ + N + G + + ++ E+ NI + ++ R + L ID + + ++
Sbjct: 686 RLFVQNVNEPGSLAQIAGVIAEHDGNIDNINMSRRSPD---FTELTIDLEVYDLKHLSAI 742
Query: 80 LEKLSVNVTIRFVKQFE 96
+ +L + V++
Sbjct: 743 IAQLRAKDVVAHVERVN 759
>gi|253997766|ref|YP_003049829.1| (p)ppGpp synthetase I SpoT/RelA [Methylovorus sp. SIP3-4]
gi|313199830|ref|YP_004038488.1| (p)ppGpp synthetase I SpoT/RelA [Methylovorus sp. MP688]
gi|253984445|gb|ACT49302.1| (p)ppGpp synthetase I, SpoT/RelA [Methylovorus sp. SIP3-4]
gi|312439146|gb|ADQ83252.1| (p)ppGpp synthetase I, SpoT/RelA [Methylovorus sp. MP688]
Length = 740
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 33/89 (37%), Gaps = 8/89 (8%)
Query: 16 NFDVDIGRLMICIVN-----ADILGIVVFVGNILGEYGINIA--HFHLGRSQSTEHAISF 68
+ + D + VN A+ G++ + + + E G NI S + +
Sbjct: 643 DVEWDPDGKRLFNVNLKLVVANQRGMLAQIASTIAEAGSNIDHVSMEESDSSAYTNMHFT 702
Query: 69 LCIDGSIL-NSVLEKLSVNVTIRFVKQFE 96
+ ++ + ++ ++ + + + +
Sbjct: 703 VQVENRVHLAELMRRIRKIPDVVRINRVK 731
>gi|238786220|ref|ZP_04630168.1| GTP pyrophosphokinase [Yersinia bercovieri ATCC 43970]
gi|238712884|gb|EEQ04948.1| GTP pyrophosphokinase [Yersinia bercovieri ATCC 43970]
Length = 383
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 30/94 (31%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ A
Sbjct: 290 RIV--DAVWGESYSSGYSLVVRVSANDRSGLLRDITTILANEKVNVLGVASRSDTKKMMA 347
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 348 TIDMDIEIYNLQVLGRVLAKLNQLPDVIDARRLH 381
>gi|224014248|ref|XP_002296787.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968642|gb|EED86988.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 468
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 12/98 (12%), Positives = 31/98 (31%), Gaps = 9/98 (9%)
Query: 5 GKPR-FIKIQEINFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G R + + +V ++ G++ + +NI
Sbjct: 355 GTIRNSVNFPSASLPNRPENSIRFTVVTQNVPGMLAHISETFAGSNLNI--LQQINQSRG 412
Query: 63 EHAISFLCIDGSILN-----SVLEKLSVNVTIRFVKQF 95
A + + +D S + +V EK+++ + +
Sbjct: 413 NVAYNVVDVDTSGHDVVDFKAVQEKITMLDGVLSSRVI 450
>gi|313837637|gb|EFS75351.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL037PA2]
gi|314927482|gb|EFS91313.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL044PA1]
gi|314972577|gb|EFT16674.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL037PA3]
gi|328907568|gb|EGG27334.1| phosphoglycerate dehydrogenase [Propionibacterium sp. P08]
Length = 396
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 9/81 (11%), Positives = 27/81 (33%), Gaps = 6/81 (7%)
Query: 18 DVDIG---RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
++ I ++ ++ G++ + ++ + G N+ + L E L I
Sbjct: 319 EITPSPRTGARIGHLHRNVPGVMATLNRLVADQGGNVTYQALAT--KGEFGYCVLDI-AE 375
Query: 75 ILNSVLEKLSVNVTIRFVKQF 95
+L ++ +
Sbjct: 376 TDGGLLANVTDLDGTIRARIL 396
>gi|73538572|ref|YP_298939.1| D-3-phosphoglycerate dehydrogenase [Ralstonia eutropha JMP134]
gi|72121909|gb|AAZ64095.1| Amino acid-binding ACT:6-phosphogluconate dehydrogenase,
NAD-binding:D-isomer specific 2-hydroxyacid
dehydrogenase, catalytic region:D-isomer specific
2-hydroxyacid dehydrogenase, NAD-binding [Ralstonia
eutropha JMP134]
Length = 425
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 6/94 (6%)
Query: 4 DGKPRFIKIQEINFDVDI--GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
G + D + ++++ G + + +L + G+NI HL
Sbjct: 334 GGTIGAVNFP--EVDPGPLHAPARLLNIHSNAPGALAALNTLLAQDGVNINGQHL--QTR 389
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + ++E L + +
Sbjct: 390 GHTGYVVTDLDRVPSDVLMESLRTHAGFVRSRLL 423
>gi|116051734|ref|YP_789427.1| homoserine dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
gi|254236646|ref|ZP_04929969.1| homoserine dehydrogenase [Pseudomonas aeruginosa C3719]
gi|254242427|ref|ZP_04935749.1| homoserine dehydrogenase [Pseudomonas aeruginosa 2192]
gi|115586955|gb|ABJ12970.1| homoserine dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126168577|gb|EAZ54088.1| homoserine dehydrogenase [Pseudomonas aeruginosa C3719]
gi|126195805|gb|EAZ59868.1| homoserine dehydrogenase [Pseudomonas aeruginosa 2192]
Length = 434
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 24/91 (26%), Gaps = 10/91 (10%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVATILSERGINIESIMQKEAEEQDGLVPMILVTHRV 403
Query: 75 ILN---SVLEKLSVNVTI------RFVKQFE 96
I + L + V+Q
Sbjct: 404 IEQRINDAIAALEALEGVSGPVVRIRVEQLN 434
>gi|15598931|ref|NP_252425.1| homoserine dehydrogenase [Pseudomonas aeruginosa PAO1]
gi|218889986|ref|YP_002438850.1| homoserine dehydrogenase [Pseudomonas aeruginosa LESB58]
gi|296387755|ref|ZP_06877230.1| homoserine dehydrogenase [Pseudomonas aeruginosa PAb1]
gi|12230902|sp|P29365|DHOM_PSEAE RecName: Full=Homoserine dehydrogenase; Short=HDH
gi|9949903|gb|AAG07123.1|AE004792_8 homoserine dehydrogenase [Pseudomonas aeruginosa PAO1]
gi|218770209|emb|CAW25971.1| homoserine dehydrogenase [Pseudomonas aeruginosa LESB58]
Length = 434
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 24/91 (26%), Gaps = 10/91 (10%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVATILSERGINIESIMQKEAEEQDGLVPMILVTHRV 403
Query: 75 ILN---SVLEKLSVNVTI------RFVKQFE 96
I + L + V+Q
Sbjct: 404 IEQRINDAIAALEALEGVSGPVVRIRVEQLN 434
>gi|297537283|ref|YP_003673052.1| (p)ppGpp synthetase I SpoT/RelA [Methylotenera sp. 301]
gi|297256630|gb|ADI28475.1| (p)ppGpp synthetase I, SpoT/RelA [Methylotenera sp. 301]
Length = 764
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 31/85 (36%), Gaps = 8/85 (9%)
Query: 16 NFDVDIGRLMICIVN-----ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+ + + + N A+ G++ + + + + G NI + + + +A +
Sbjct: 663 DVEWEPESQRLYKTNLNLTVANQPGMLAKIASGIADAGSNIDNVSVEEEDGSAYANLYFT 722
Query: 71 I---DGSILNSVLEKLSVNVTIRFV 92
+ D L ++ L + +
Sbjct: 723 VQVKDRIHLAELMRSLRKIPDVVRI 747
>gi|39935759|ref|NP_948035.1| GTP pyrophosphokinase [Rhodopseudomonas palustris CGA009]
gi|192291346|ref|YP_001991951.1| (p)ppGpp synthetase I, SpoT/RelA [Rhodopseudomonas palustris TIE-1]
gi|39649612|emb|CAE28134.1| GTP pyrophosphokinase [Rhodopseudomonas palustris CGA009]
gi|192285095|gb|ACF01476.1| (p)ppGpp synthetase I, SpoT/RelA [Rhodopseudomonas palustris TIE-1]
Length = 760
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SV 79
+ + N + G + + ++ E+ NI + ++ R + L ID + + ++
Sbjct: 686 RLFVQNVNEPGSLAQIAGVIAEHDGNIDNINMSRRSPD---FTELTIDLEVYDLKHLSAI 742
Query: 80 LEKLSVNVTIRFVKQFE 96
+ +L + V++
Sbjct: 743 IAQLRAKDVVAHVERVN 759
>gi|156932730|ref|YP_001436646.1| GDP/GTP pyrophosphokinase [Cronobacter sakazakii ATCC BAA-894]
gi|156530984|gb|ABU75810.1| hypothetical protein ESA_00519 [Cronobacter sakazakii ATCC BAA-894]
Length = 744
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLIVRVTANDRSGLLRDITTILANEKVNVLGVTSRSDTRQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMEIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|107103251|ref|ZP_01367169.1| hypothetical protein PaerPA_01004320 [Pseudomonas aeruginosa PACS2]
Length = 424
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 24/91 (26%), Gaps = 10/91 (10%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V IL E GINI + L
Sbjct: 334 PIEACESAYYLRIQAKDHPGVLAQVATILSERGINIESIMQKEAEEQDGLVPMILVTHRV 393
Query: 75 ILN---SVLEKLSVNVTI------RFVKQFE 96
I + L + V+Q
Sbjct: 394 IEQRINDAIAALEALEGVSGPVVRIRVEQLN 424
>gi|313109143|ref|ZP_07795114.1| homoserine dehydrogenase [Pseudomonas aeruginosa 39016]
gi|310881616|gb|EFQ40210.1| homoserine dehydrogenase [Pseudomonas aeruginosa 39016]
Length = 424
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 24/91 (26%), Gaps = 10/91 (10%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V IL E GINI + L
Sbjct: 334 PIEACESAYYLRIQAKDHPGVLAQVATILSERGINIESIMQKEAEEQDGLVPMILVTHRV 393
Query: 75 ILN---SVLEKLSVNVTI------RFVKQFE 96
I + L + V+Q
Sbjct: 394 IEQRINDAIAALEALEGVSGQVVRIRVEQLN 424
>gi|152983687|ref|YP_001346767.1| homoserine dehydrogenase [Pseudomonas aeruginosa PA7]
gi|150958845|gb|ABR80870.1| homoserine dehydrogenase [Pseudomonas aeruginosa PA7]
Length = 434
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 24/91 (26%), Gaps = 10/91 (10%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVATILSERGINIESIMQKEAEEQDGLVPMILVTHRV 403
Query: 75 ILN---SVLEKLSVNVTI------RFVKQFE 96
I + L + V+Q
Sbjct: 404 IEQRINDAIAALEALEGVSGPVVRIRVEQLN 434
>gi|162418825|ref|YP_001605545.1| GDP/GTP pyrophosphokinase [Yersinia pestis Angola]
gi|162351640|gb|ABX85588.1| GTP pyrophosphokinase [Yersinia pestis Angola]
Length = 744
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 30/94 (31%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ A
Sbjct: 651 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTKKMVA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMDIEIYNLQMLGRVLAKLNQLPDVIDARRLH 742
>gi|309789822|ref|ZP_07684401.1| acetolactate synthase, small subunit [Oscillochloris trichoides
DG6]
gi|308228126|gb|EFO81775.1| acetolactate synthase, small subunit [Oscillochloris trichoides
DG6]
Length = 170
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + I + D G++ V ++ G NI +G S+ + L ++ + V
Sbjct: 1 MQKHTIVALVQDRPGVLSRVSGLVRRRGYNIESLAVGHSEQPGVSRLTLVVESEDVEQVT 60
Query: 81 EKLSVNVTIRFVKQFEFN 98
++L + + V F+
Sbjct: 61 KQLYRLIEVIKVSDVTFD 78
>gi|197122307|ref|YP_002134258.1| acetolactate synthase, small subunit [Anaeromyxobacter sp. K]
gi|196172156|gb|ACG73129.1| acetolactate synthase, small subunit [Anaeromyxobacter sp. K]
Length = 178
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILN 77
+ I ++ + G++ + + G NIA +G ++ E++ + + S ++
Sbjct: 10 NGSTHTISLLVENKPGVLHRIAGLFSRRGYNIASLTVGPTERAEYSRMTIVVRLSSSPVD 69
Query: 78 SVLEKLSVNVTIRFVKQFE 96
V+ ++ V + V++
Sbjct: 70 QVVRQVQKLVPVVEVRELS 88
>gi|220917089|ref|YP_002492393.1| acetolactate synthase, small subunit [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219954943|gb|ACL65327.1| acetolactate synthase, small subunit [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 178
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILN 77
+ I ++ + G++ + + G NIA +G ++ E++ + + S ++
Sbjct: 10 NGSTHTISLLVENKPGVLHRIAGLFSRRGYNIASLTVGPTERAEYSRMTIVVRLSSSPVD 69
Query: 78 SVLEKLSVNVTIRFVKQFE 96
V+ ++ V + V++
Sbjct: 70 QVVRQVQKLVPVVEVRELS 88
>gi|73748636|ref|YP_307875.1| acetolactate synthase 3 regulatory subunit [Dehalococcoides sp.
CBDB1]
gi|147669395|ref|YP_001214213.1| acetolactate synthase 3 regulatory subunit [Dehalococcoides sp.
BAV1]
gi|289432661|ref|YP_003462534.1| acetolactate synthase, small subunit [Dehalococcoides sp. GT]
gi|73660352|emb|CAI82959.1| acetolactate synthase, small subunit [Dehalococcoides sp. CBDB1]
gi|146270343|gb|ABQ17335.1| acetolactate synthase, small subunit [Dehalococcoides sp. BAV1]
gi|288946381|gb|ADC74078.1| acetolactate synthase, small subunit [Dehalococcoides sp. GT]
Length = 178
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-- 76
+ + I + D G++ + ++ G NI +GRS++ + + +DG+
Sbjct: 1 MSPTKHTIVALVEDRPGVLNRMASLFRRRGFNIDSIAVGRSETPGFSRMTIVVDGANTMV 60
Query: 77 NSVLEKLSVNVTIRFVKQFE 96
V ++L + + V
Sbjct: 61 EQVRKQLDKVIDVVKVSDIT 80
>gi|39998546|ref|NP_954497.1| glycine cleavage system transcriptional repressor [Geobacter
sulfurreducens PCA]
gi|39985493|gb|AAR36847.1| glycine cleavage system transcriptional repressor, putative
[Geobacter sulfurreducens PCA]
gi|298507489|gb|ADI86212.1| amino acid-binding ACT domain regulatory protein [Geobacter
sulfurreducens KN400]
Length = 185
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 9/86 (10%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ M+ + +D GIV V L E INI + + + I+ ++ +
Sbjct: 96 EGEICMLSVYGSDKPGIVYRVTKELAERSINITDLNTKLVGKKGEPVYVMMIEAALPEGI 155
Query: 80 --------LEKLSVNVTI-RFVKQFE 96
LE++ + + V+
Sbjct: 156 SVDQVSAMLEEIRKELNVEISVRSIT 181
>gi|283786673|ref|YP_003366538.1| GTP pyrophosphokinase [Citrobacter rodentium ICC168]
gi|282950127|emb|CBG89763.1| GTP pyrophosphokinase [Citrobacter rodentium ICC168]
Length = 744
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDTRQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLSKLNQVPDVIDARRLH 742
>gi|307132368|ref|YP_003884384.1| GTP pyrophosphokinase/Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Dickeya dadantii 3937]
gi|306529897|gb|ADM99827.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Dickeya dadantii 3937]
Length = 745
Score = 45.4 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 35/96 (36%), Gaps = 11/96 (11%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + +
Sbjct: 652 RIVE--AVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLG--VSSRSDVKQQ 707
Query: 66 ISFLCIDGSILN-----SVLEKLSVNVTIRFVKQFE 96
++ + +D I N VL KL+ + ++ +
Sbjct: 708 LATIDMDIEIYNLQVLGRVLAKLNQLPDVIDARRLQ 743
>gi|271501841|ref|YP_003334867.1| (p)ppGpp synthetase I SpoT/RelA [Dickeya dadantii Ech586]
gi|270345396|gb|ACZ78161.1| (p)ppGpp synthetase I, SpoT/RelA [Dickeya dadantii Ech586]
Length = 745
Score = 45.4 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 35/96 (36%), Gaps = 11/96 (11%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + +
Sbjct: 652 RIVE--AVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLG--VSSRSDVKQQ 707
Query: 66 ISFLCIDGSILN-----SVLEKLSVNVTIRFVKQFE 96
++ + +D I N VL KL+ + ++ +
Sbjct: 708 LATIDMDIEIYNLQVLGRVLAKLNQLPDVIDARRLQ 743
>gi|229827335|ref|ZP_04453404.1| hypothetical protein GCWU000182_02723 [Abiotrophia defectiva ATCC
49176]
gi|229788273|gb|EEP24387.1| hypothetical protein GCWU000182_02723 [Abiotrophia defectiva ATCC
49176]
Length = 146
Score = 45.4 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 3/88 (3%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-L 69
+I D + + D G++ V + +G+NI H + ++S L
Sbjct: 56 EINFFYEDAKGKTISFLLEMEDRQGLLSEVLKEVARHGVNILTIHQSIPVNGLASLSLSL 115
Query: 70 CIDGSILN--SVLEKLSVNVTIRFVKQF 95
+ + ++ + IR +K
Sbjct: 116 QVSDGFTDVTEMVASIEAIDGIRRMKIL 143
>gi|95929562|ref|ZP_01312304.1| Homoserine dehydrogenase [Desulfuromonas acetoxidans DSM 684]
gi|95134259|gb|EAT15916.1| Homoserine dehydrogenase [Desulfuromonas acetoxidans DSM 684]
Length = 436
Score = 45.4 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 20/58 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
D G++ + LGEY I+I+ + L ++ + V L
Sbjct: 361 EDRPGVLAKIAATLGEYNISISSMIQPERELGGCVPIVLMTHDAVESDVRAALEKIDQ 418
>gi|332037845|gb|EGI74294.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Pseudoalteromonas
haloplanktis ANT/505]
Length = 718
Score = 45.4 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLS 84
I D G++ + ++L +N+ + ++ + + AI + I D S N VL KL
Sbjct: 647 IEATDRSGLIRDISSVLANEKVNVLNMNVNTVEDNQLAIFTMQIEVHDLSGTNRVLSKLH 706
Query: 85 VNVTIRFVK 93
+ K
Sbjct: 707 QIEGVHDAK 715
>gi|260584956|ref|ZP_05852700.1| acetoin utilization protein AcuB [Granulicatella elegans ATCC
700633]
gi|260157386|gb|EEW92458.1| acetoin utilization protein AcuB [Granulicatella elegans ATCC
700633]
Length = 213
Score = 45.4 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 5/77 (6%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
FI I N G + +N D G + + N+L + +N+ + +
Sbjct: 131 FIDISGYN---TPGSRLFIEINEDKPGPLEEISNVLRDNNVNVDTISVYHRE--GKVQVV 185
Query: 69 LCIDGSILNSVLEKLSV 85
L +D + V + ++
Sbjct: 186 LHVDSENPDEVADFIAQ 202
>gi|251788452|ref|YP_003003173.1| GDP/GTP pyrophosphokinase [Dickeya zeae Ech1591]
gi|247537073|gb|ACT05694.1| (p)ppGpp synthetase I, SpoT/RelA [Dickeya zeae Ech1591]
Length = 745
Score = 45.4 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 35/96 (36%), Gaps = 11/96 (11%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + +
Sbjct: 652 RIVE--AVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLG--VSSRSDVKQQ 707
Query: 66 ISFLCIDGSILN-----SVLEKLSVNVTIRFVKQFE 96
++ + +D I N VL KL+ + ++ +
Sbjct: 708 LATIDMDIEIYNLQVLGRVLAKLNQLPDVIDARRLQ 743
>gi|328950661|ref|YP_004367996.1| Prephenate dehydrogenase [Marinithermus hydrothermalis DSM 14884]
gi|328450985|gb|AEB11886.1| Prephenate dehydrogenase [Marinithermus hydrothermalis DSM 14884]
Length = 359
Score = 45.4 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 21/73 (28%), Gaps = 2/73 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + D G + + LGE G+NI + + AI
Sbjct: 289 PEMYDLVVQVPDRPGQIARIATALGEAGVNIKDIEVLTIRDEGGAIRLGFGSREESARAR 348
Query: 81 EKLSVNVTIRFVK 93
+ L V+
Sbjct: 349 QVLEQIG--YRVR 359
>gi|291541752|emb|CBL14862.1| Phosphoglycerate dehydrogenase and related dehydrogenases
[Ruminococcus bromii L2-63]
Length = 384
Score = 45.4 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 9/94 (9%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 3 SDGKPRFIKIQEINF-DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+ + I+ + C+ + ++ ++ V + N+ +
Sbjct: 297 NGNIINSVNYPAISLARTNADDTRFCVAHKNVPELLKKVLTQISG---NVENMLS--KSR 351
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
++A + + + G+ + L K++ + V+
Sbjct: 352 GDYAYTIIDVAGAGADD-LAKIAAVDGVIRVRAI 384
>gi|295836364|ref|ZP_06823297.1| acetolactate synthase, small subunit [Streptomyces sp. SPB74]
gi|295825986|gb|EFG64598.1| acetolactate synthase, small subunit [Streptomyces sp. SPB74]
Length = 174
Score = 45.4 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNS 78
+ + + ++ + G++ + ++ G NI +G ++ + + + +D L
Sbjct: 1 MSKHTLSVLVENKPGVLARITSLFSRRGFNIDSLAVGTTEHPDISRITIVVNVDELPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 VTKQLNKLVNVLKIVELE 78
>gi|116694770|ref|YP_728981.1| D-3-phosphoglycerate dehydrogenase [Ralstonia eutropha H16]
gi|113529269|emb|CAJ95616.1| D-3-Phosphoglycerate dehydrogenase [Ralstonia eutropha H16]
Length = 405
Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 28/94 (29%), Gaps = 6/94 (6%)
Query: 4 DGKPRFIKIQEINFDVDI--GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
G + D + V+ + G + + +L + G+NI HL
Sbjct: 314 GGTIGAVNFP--EVDPGPLHAPARLLNVHGNAPGALAALNTLLAQEGVNITGQHL--QTR 369
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + +++ L + +
Sbjct: 370 GHTGYVVTDLDRVPSDQLMQALRTHAGFARSRLI 403
>gi|162454078|ref|YP_001616445.1| D-3-phosphoglycerate dehydrogenase [Sorangium cellulosum 'So ce
56']
gi|161164660|emb|CAN95965.1| D-3-phosphoglycerate dehydrogenase [Sorangium cellulosum 'So ce
56']
Length = 402
Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
P + I R + + D +G++ +++ +GINI +
Sbjct: 312 PNVVNI----CATSPARYAVVVRMMDKVGVLANTLSVMKRHGINIEEISNTVFEGATATC 367
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + + G + L++++ + V
Sbjct: 368 TKMRVSGRPSEACLKEIAAFEEVLHVDIV 396
>gi|50842751|ref|YP_055978.1| D-3-phosphoglycerate dehydrogenase [Propionibacterium acnes
KPA171202]
gi|50840353|gb|AAT83020.1| D-3-phosphoglycerate dehydrogenase [Propionibacterium acnes
KPA171202]
Length = 417
Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I EI I ++ ++ G++ + ++ + G N+ + L E L
Sbjct: 336 VNIPEIT-PSPRTGARIGHLHRNVPGVMATLNRLVADQGGNVTYQALAT--KGELGYCIL 392
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I + +L ++V +
Sbjct: 393 DI-AETDSGLLANVTVLEGTIRARIL 417
>gi|30268666|dbj|BAC76004.1| RelA-SpoT like protein RSH1 [Nicotiana tabacum]
Length = 876
Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 20 DIGRLM---ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL 76
++ +C+VN D G++ V + L GI+I + + A+ I+ S+
Sbjct: 784 NLEGHSVQWLCVVNIDRKGMMADVTSALAAVGISICSCSVETDRGKGMAVELFHIEASL- 842
Query: 77 NSVLEKLSVNVTIRFV 92
S+++ + I V
Sbjct: 843 ESLVDACARIDMILGV 858
>gi|315105810|gb|EFT77786.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL030PA1]
Length = 396
Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I EI I ++ ++ G++ + ++ + G N+ + L E L
Sbjct: 315 VNIPEIT-PSPRTGARIGHLHRNVPGVMATLNRLVADQGGNVTYQALAT--KGELGYCIL 371
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I + +L +SV +
Sbjct: 372 DI-AETDSGLLANVSVLEGTIRARIL 396
>gi|157148320|ref|YP_001455639.1| GDP/GTP pyrophosphokinase [Citrobacter koseri ATCC BAA-895]
gi|157085525|gb|ABV15203.1| hypothetical protein CKO_04137 [Citrobacter koseri ATCC BAA-895]
Length = 744
Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDTRQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLSKLNQVPDVIDARRLH 742
>gi|331006921|ref|ZP_08330166.1| Homoserine dehydrogenase [gamma proteobacterium IMCC1989]
gi|330419241|gb|EGG93662.1| Homoserine dehydrogenase [gamma proteobacterium IMCC1989]
Length = 432
Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ I ++ + ++ D G++ V IL +GI+I H + +E
Sbjct: 340 LVDINDVT-----TGYYLRMLADDKPGVLSQVTTILSNHGISIETMHQSEPEESETTAEI 394
Query: 69 LCIDGSILN-SVLEKLSVNVT 88
+ I I +L +S
Sbjct: 395 VLITSQIQERELLTAVSEMEG 415
>gi|148266396|ref|YP_001233102.1| amino acid-binding ACT domain-containing protein [Geobacter
uraniireducens Rf4]
gi|146399896|gb|ABQ28529.1| amino acid-binding ACT domain protein [Geobacter uraniireducens
Rf4]
Length = 188
Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-- 77
+ +I + +D GIV V L E INIA + + E + L ++ ++ +
Sbjct: 99 EGELCLISVYGSDQPGIVYRVTKELAERKINIADLNTKLIGTKEEPVYVLMLEAALPDGM 158
Query: 78 ------SVLEKLSVNVTI-RFVKQFE 96
+VLEKL +++ V+
Sbjct: 159 SVDDTAAVLEKLKKELSVEISVRVIT 184
>gi|302343791|ref|YP_003808320.1| amino acid-binding ACT domain protein [Desulfarculus baarsii DSM
2075]
gi|301640404|gb|ADK85726.1| amino acid-binding ACT domain protein [Desulfarculus baarsii DSM
2075]
Length = 145
Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 19/49 (38%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
+ I D G + + ++GE G+NI F + + + D
Sbjct: 6 LTINIPDRPGQLAAISEMMGEAGVNIIAFFVSTNTPGGQGLMRFVADNP 54
>gi|116620408|ref|YP_822564.1| (p)ppGpp synthetase I, SpoT/RelA [Candidatus Solibacter usitatus
Ellin6076]
gi|116223570|gb|ABJ82279.1| (p)ppGpp synthetase I, SpoT/RelA [Candidatus Solibacter usitatus
Ellin6076]
Length = 742
Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFH--LGRSQSTEHAISFLCI-DGSILNSVLE 81
I + D G++ + +L + NI + + D L ++
Sbjct: 667 RIVVHTDDRPGMLNQLTGVLSDENTNIRSLEAKTETDHDGGVVEMTVDVRDKKQLEKLVA 726
Query: 82 KLSVNVTIRFVKQF 95
+ +R V++
Sbjct: 727 AMRRISGVRDVERL 740
>gi|26988203|ref|NP_743628.1| homoserine dehydrogenase [Pseudomonas putida KT2440]
gi|148549457|ref|YP_001269559.1| homoserine dehydrogenase [Pseudomonas putida F1]
gi|24982941|gb|AAN67092.1|AE016338_2 homoserine dehydrogenase [Pseudomonas putida KT2440]
gi|148513515|gb|ABQ80375.1| homoserine dehydrogenase [Pseudomonas putida F1]
gi|313500305|gb|ADR61671.1| Hom [Pseudomonas putida BIRD-1]
Length = 434
Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 3/88 (3%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L G
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEAEEQDGLVPMILVTHGV 403
Query: 75 ILNSVLEKLSVNVTIRFV--KQFEFNVD 100
+ + + + ++ V K V+
Sbjct: 404 VEQRINDAIVALEALQDVVGKVVRIRVE 431
>gi|291086241|ref|ZP_06355189.2| GTP diphosphokinase [Citrobacter youngae ATCC 29220]
gi|291068629|gb|EFE06738.1| GTP diphosphokinase [Citrobacter youngae ATCC 29220]
Length = 761
Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 668 RIV--DAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 725
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 726 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 759
>gi|182437034|ref|YP_001824753.1| D-3-phosphoglycerate dehydrogenase [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178465550|dbj|BAG20070.1| putative D-3-phosphoglycerate dehydrogenase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 530
Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR-SQSTEHA 65
R ++I DV + + + D G + V + GI + +GR S E A
Sbjct: 437 ARLVEICGYATDVALDGDLAFFLAPDRPGSIGAVSEVFTRAGIPVESLWIGRGGGSGETA 496
Query: 66 ISFLCIDGSILNS 78
+ L + G
Sbjct: 497 LVALGLGGPAGQE 509
>gi|53805098|ref|YP_113113.1| homoserine dehydrogenase [Methylococcus capsulatus str. Bath]
gi|53758859|gb|AAU93150.1| homoserine dehydrogenase [Methylococcus capsulatus str. Bath]
Length = 436
Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+I + + + + D G++ V IL + I+I E +
Sbjct: 339 ISEIPILPIEAIETAYYLRLSAEDKPGVLADVTRILAAHHISIEAVLQKEMPEGESHLPV 398
Query: 69 LCIDGSILN----SVLEKLSVNVTIR-FVKQFEFN 98
+ + + + + ++ TI+ VK+
Sbjct: 399 IMLTQKVTERELNAAVREIEALPTIKGAVKRIRLE 433
>gi|326777649|ref|ZP_08236914.1| D-3-phosphoglycerate dehydrogenase [Streptomyces cf. griseus
XylebKG-1]
gi|326657982|gb|EGE42828.1| D-3-phosphoglycerate dehydrogenase [Streptomyces cf. griseus
XylebKG-1]
Length = 530
Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR-SQSTEHA 65
R ++I DV + + + D G + V + GI + +GR S E A
Sbjct: 437 ARLVEICGYATDVALDGDLAFFLAPDRPGSIGAVSEVFTRAGIPVESLWIGRGGGSGETA 496
Query: 66 ISFLCIDGSILNS 78
+ L + G
Sbjct: 497 LVALGLGGPAGQE 509
>gi|260599135|ref|YP_003211706.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Cronobacter turicensis
z3032]
gi|260218312|emb|CBA33298.1| GTP pyrophosphokinase [Cronobacter turicensis z3032]
Length = 744
Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVTSRSETRQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMEIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|325273833|ref|ZP_08140018.1| homoserine dehydrogenase [Pseudomonas sp. TJI-51]
gi|324101039|gb|EGB98700.1| homoserine dehydrogenase [Pseudomonas sp. TJI-51]
Length = 434
Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 3/88 (3%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L G
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEAEEQDGLVPMILVTHGV 403
Query: 75 ILNSVLEKLSVNVTIRFV--KQFEFNVD 100
+ + + + ++ V K V+
Sbjct: 404 VEQRINDAIVALEALQDVVGKVVRIRVE 431
>gi|89091998|ref|ZP_01164953.1| homoserine dehydrogenase [Oceanospirillum sp. MED92]
gi|89083733|gb|EAR62950.1| homoserine dehydrogenase [Oceanospirillum sp. MED92]
Length = 438
Score = 45.0 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---ID 72
+ + + + G++ + +ILGE GINI + + + L ++
Sbjct: 349 PVEQTESAYYLRMNAEEKPGVLAKITSILGEQGINIEAIIQKETSEDQVPVIILTQSVLE 408
Query: 73 GSILNSV--LEKLSVNVT-IRFVKQFEFN 98
+ +++ +E L+ + ++ F+
Sbjct: 409 QKLNDAIAQIEALAEIGGSVTRIRVEHFD 437
>gi|315103722|gb|EFT75698.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL050PA2]
Length = 396
Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I EI I ++ ++ G++ + ++ + G N+ + L E L
Sbjct: 315 VNIPEIT-PSPRTGARIGHLHRNVPGVMATLNRLVADQGGNVTYQALAT--KGELGYCIL 371
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I + +L ++V +
Sbjct: 372 DI-AETDSGLLANVTVLEGTIRARIL 396
>gi|212536012|ref|XP_002148162.1| D-3-phosphoglycerate dehydrogenase [Penicillium marneffei ATCC
18224]
gi|210070561|gb|EEA24651.1| D-3-phosphoglycerate dehydrogenase [Penicillium marneffei ATCC
18224]
Length = 479
Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 9/86 (10%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + D + + ++ ++ G++ V ILG++ ++ R
Sbjct: 395 VNLRSLTID-EPDHARVVYIHQNVPGVLRKVNEILGDHNVD-KQMTDSRDDVAYLMADIS 452
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + + L + +
Sbjct: 453 NVDTPTIKDLYAALESLSSRIRTRIL 478
>gi|50122490|ref|YP_051657.1| GDP/GTP pyrophosphokinase [Pectobacterium atrosepticum SCRI1043]
gi|49613016|emb|CAG76467.1| GTP pyrophosphokinase [Pectobacterium atrosepticum SCRI1043]
Length = 745
Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 7/91 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 652 RIV--DAVWGESYSSGYSLVVRVIANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 709
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVK 93
+ I+ +L VL KL+ + +
Sbjct: 710 TIDMDIEIYNLQVLGRVLAKLNQLPDVIDAR 740
>gi|302391801|ref|YP_003827621.1| prephenate dehydrogenase [Acetohalobium arabaticum DSM 5501]
gi|302203878|gb|ADL12556.1| Prephenate dehydrogenase [Acetohalobium arabaticum DSM 5501]
Length = 368
Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 27/68 (39%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ + D + V ++LGE GINI+ L + + + + DG L + L
Sbjct: 301 LVVTIPDQPKAIGKVTSLLGEAGINISDIELLQVRESGGTLRLAFADGEALKLAEDLLRE 360
Query: 86 NVTIRFVK 93
VK
Sbjct: 361 AGYKLKVK 368
>gi|313812688|gb|EFS50402.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL025PA1]
Length = 396
Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I EI I ++ ++ G++ + ++ + G N+ + L E L
Sbjct: 315 VNIPEIT-PSPRTGARIGHLHRNVPGVMATLNRLVADQGGNVTYQALAT--KGELGYCIL 371
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I + +L ++V +
Sbjct: 372 DI-AETDSGLLANVTVLEGTIRARIL 396
>gi|269925308|ref|YP_003321931.1| acetolactate synthase, small subunit [Thermobaculum terrenum ATCC
BAA-798]
gi|269788968|gb|ACZ41109.1| acetolactate synthase, small subunit [Thermobaculum terrenum ATCC
BAA-798]
Length = 174
Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-- 76
+ + + D G++ + + NI +G S+ + + ++G
Sbjct: 1 MSTQGRTLVALVQDHPGVLTRISGLFRRRNFNIESLAVGHSEKPGVSRMTIVVNGDASEV 60
Query: 77 NSVLEKLSVNVTIRFVKQFE 96
+ V+++LS + + VK
Sbjct: 61 DQVVKQLSKLIEVIEVKDIS 80
>gi|154509056|ref|ZP_02044698.1| hypothetical protein ACTODO_01573 [Actinomyces odontolyticus ATCC
17982]
gi|153798690|gb|EDN81110.1| hypothetical protein ACTODO_01573 [Actinomyces odontolyticus ATCC
17982]
Length = 401
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + +++ ++ G++ V I N+ L + ++ I + LE
Sbjct: 328 SRYRVRLIHRNVPGVMARVNQIFASSEANVDAQILATVDEVGYVLT--DISAGLGREALE 385
Query: 82 KLSVNVTIRF 91
+LS
Sbjct: 386 ELSHLPETVR 395
>gi|329295557|ref|ZP_08252893.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Plautia stali
symbiont]
Length = 134
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 43 RIV--DAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVSSRSDTKKQLA 100
Query: 66 ISFLCID---GSILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL +L+ I ++
Sbjct: 101 TIDMDIEIYNQRVLGRVLARLNQVPDIIDARRLH 134
>gi|293192314|ref|ZP_06609425.1| D-3-phosphoglycerate dehydrogenase [Actinomyces odontolyticus
F0309]
gi|292820229|gb|EFF79223.1| D-3-phosphoglycerate dehydrogenase [Actinomyces odontolyticus
F0309]
Length = 401
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + +++ ++ G++ V I N+ L + ++ I + LE
Sbjct: 328 SRYRVRLIHRNVPGVMARVNQIFASSEANVDAQILATVDEVGYVLT--DISAGLGREALE 385
Query: 82 KLSVNVTIRF 91
+LS
Sbjct: 386 ELSHLPETVR 395
>gi|332178162|gb|AEE13851.1| (p)ppGpp synthetase I, SpoT/RelA [Thermodesulfobium narugense DSM
14796]
Length = 779
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 11/95 (11%), Positives = 35/95 (36%), Gaps = 4/95 (4%)
Query: 4 DGKPRFIKIQ-EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+G R + + + + + D +G + V + +N+ + +++
Sbjct: 680 EGNDRIVDLNWNNQLKAESYESYMIVEGTDRVGFMKDVLIRVASLNVNVVKASVNTNKAK 739
Query: 63 EHAISFLCI---DGSILNSVLEKLSVNVTIRFVKQ 94
+ L + D + ++++L + V+Q
Sbjct: 740 KKVYMILEVQLKDNLERDRLIKELREVPDVIDVRQ 774
>gi|324111188|gb|EGC05171.1| RelA/SpoT family protein [Escherichia fergusonii B253]
Length = 744
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVLANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|167629995|ref|YP_001680494.1| prephenate dehydrogenase, putative [Heliobacterium modesticaldum
Ice1]
gi|167592735|gb|ABZ84483.1| prephenate dehydrogenase, putative [Heliobacterium modesticaldum
Ice1]
Length = 390
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 25/70 (35%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
G I + D G++ + +LG+ GINIA + R + + +
Sbjct: 317 PGIHEIVLTVPDEPGVIGTIARLLGDNGINIADIEILRVREGHGGTIRIGFYEAPDADGA 376
Query: 81 EKLSVNVTIR 90
++ I
Sbjct: 377 VEVLAGAGII 386
>gi|152971648|ref|YP_001336757.1| GDP/GTP pyrophosphokinase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238896245|ref|YP_002920981.1| GDP/GTP pyrophosphokinase [Klebsiella pneumoniae NTUH-K2044]
gi|330012193|ref|ZP_08307326.1| GTP diphosphokinase [Klebsiella sp. MS 92-3]
gi|150956497|gb|ABR78527.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|238548563|dbj|BAH64914.1| (p)ppGpp synthetase I [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|328533895|gb|EGF60563.1| GTP diphosphokinase [Klebsiella sp. MS 92-3]
Length = 745
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 652 RIV--DAVWGESYSAGYSLVVRVEANDRSGLLRDITTILANEKVNVLGVASRSDTRQQLA 709
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 710 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 743
>gi|83590180|ref|YP_430189.1| prephenate dehydrogenase [Moorella thermoacetica ATCC 39073]
gi|83573094|gb|ABC19646.1| prephenate dehydrogenase [Moorella thermoacetica ATCC 39073]
Length = 375
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + D G++ + LG+ GINI + R + E L + +
Sbjct: 299 PALHELVVTVPDRPGVIGAMATSLGDAGINIIDIEILRVREGEGGSIRLGFTTAAAATRA 358
Query: 81 EKLSVNVTIRFVKQFE 96
++ N I V+ E
Sbjct: 359 LEILQNSGI-NVRLLE 373
>gi|242238300|ref|YP_002986481.1| GDP/GTP pyrophosphokinase [Dickeya dadantii Ech703]
gi|242130357|gb|ACS84659.1| (p)ppGpp synthetase I, SpoT/RelA [Dickeya dadantii Ech703]
Length = 746
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 652 RIVE--AVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVSSRSDVKQQLA 709
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ ++ +L VL KL+ + ++ +
Sbjct: 710 TIDMEMEIYNLQVLGRVLAKLNQLPDVIDARRLQ 743
>gi|218547700|ref|YP_002381491.1| GDP/GTP pyrophosphokinase [Escherichia fergusonii ATCC 35469]
gi|218355241|emb|CAQ87848.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia fergusonii
ATCC 35469]
gi|325496176|gb|EGC94035.1| GDP/GTP pyrophosphokinase [Escherichia fergusonii ECD227]
Length = 744
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|257867407|ref|ZP_05647060.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus EC30]
gi|257873738|ref|ZP_05653391.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus EC10]
gi|257801463|gb|EEV30393.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus EC30]
gi|257807902|gb|EEV36724.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus EC10]
Length = 388
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 22/71 (30%), Gaps = 3/71 (4%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + + D G + I+ E G++I + R
Sbjct: 289 AGTIQESVNFPHAELPF-LAPYRLALFYHDKPGAFAPLLRIISEAGVDIDNLASERKA-- 345
Query: 63 EHAISFLCIDG 73
A + + +D
Sbjct: 346 GVAYTLIDLDE 356
>gi|292491389|ref|YP_003526828.1| RelA/SpoT family protein [Nitrosococcus halophilus Nc4]
gi|291579984|gb|ADE14441.1| RelA/SpoT family protein [Nitrosococcus halophilus Nc4]
Length = 712
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEK 82
I I D G++ + ++L + +NI + +S+ A L I D LN +L++
Sbjct: 636 ISIQAEDRKGLLHDITSLLAQKDVNILTINTLSDRSSGQAHMRLTIEVSDTGQLNGLLKR 695
Query: 83 LSVNVTIRFVK 93
L+ + +
Sbjct: 696 LTRIPGVMEAR 706
>gi|312964950|ref|ZP_07779190.1| GTP pyrophosphokinase [Escherichia coli 2362-75]
gi|312290506|gb|EFR18386.1| GTP pyrophosphokinase [Escherichia coli 2362-75]
Length = 744
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|262041525|ref|ZP_06014722.1| GTP diphosphokinase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259041086|gb|EEW42160.1| GTP diphosphokinase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 745
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 652 RIV--DAVWGESYSAGYSLVVRVEANDRSGLLRDITTILANEKVNVLGVASRSDTRQQLA 709
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 710 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 743
>gi|253689751|ref|YP_003018941.1| (p)ppGpp synthetase I, SpoT/RelA [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756329|gb|ACT14405.1| (p)ppGpp synthetase I, SpoT/RelA [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 744
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 7/91 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSSGYSLVVRVIANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVK 93
+ I+ +L+ +L KL+ + +
Sbjct: 709 TIDMDIEIYNLQVLSRILAKLNQLPDVIDAR 739
>gi|91774406|ref|YP_544162.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Methylobacillus flagellatus KT]
gi|91708393|gb|ABE48321.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Methylobacillus flagellatus KT]
Length = 740
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 9/89 (10%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 16 NFDVDIGRLMIC-----IVNADILGIVVFVGNILGEYGINIAH--FHLGRSQSTEHAISF 68
+ + D + +V A+ G++ + + + E G NI + + + +
Sbjct: 643 DVEWDPQGHRLYKVSLKLVVANRRGMLAKIASGIAEAGSNIDNVSMEEADNSTYTNMNFT 702
Query: 69 LCIDGSIL-NSVLEKLSVNVTIRFVKQFE 96
+ ++ + ++ +L + + + +
Sbjct: 703 VQVENRVHLAELMRRLRKIPDVVRINRVK 731
>gi|301027559|ref|ZP_07190892.1| GTP diphosphokinase [Escherichia coli MS 69-1]
gi|300394902|gb|EFJ78440.1| GTP diphosphokinase [Escherichia coli MS 69-1]
Length = 744
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVMANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|288933812|ref|YP_003437871.1| (p)ppGpp synthetase I, SpoT/RelA [Klebsiella variicola At-22]
gi|290511108|ref|ZP_06550477.1| GDP/GTP pyrophosphokinase [Klebsiella sp. 1_1_55]
gi|288888541|gb|ADC56859.1| (p)ppGpp synthetase I, SpoT/RelA [Klebsiella variicola At-22]
gi|289776101|gb|EFD84100.1| GDP/GTP pyrophosphokinase [Klebsiella sp. 1_1_55]
Length = 745
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 652 RIV--DAVWGESYSAGYSLVVRVEANDRSGLLRDITTILANEKVNVLGVASRSDTRQQLA 709
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 710 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 743
>gi|323935854|gb|EGB32157.1| RelA/SpoT family protein [Escherichia coli E1520]
Length = 744
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|331674277|ref|ZP_08375037.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
TA280]
gi|331068371|gb|EGI39766.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
TA280]
Length = 744
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|289523679|ref|ZP_06440533.1| acetolactate synthase, small subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503371|gb|EFD24535.1| acetolactate synthase, small subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 178
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+I +++ D G++ + ++ G N+ +G S + + D +++ +++
Sbjct: 6 YVIGVLSEDKPGVLSRIAALIARRGYNVESLSVGHSHIEGISRFTMVVEGDERVVDQIVK 65
Query: 82 KLSVNVTIRFVKQFE 96
+L + I V+
Sbjct: 66 QLDKLIEIVEVRNLS 80
>gi|170765706|ref|ZP_02900517.1| GTP diphosphokinase [Escherichia albertii TW07627]
gi|170124852|gb|EDS93783.1| GTP diphosphokinase [Escherichia albertii TW07627]
Length = 744
Score = 44.6 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVMANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|206580427|ref|YP_002236865.1| GTP diphosphokinase [Klebsiella pneumoniae 342]
gi|206569485|gb|ACI11261.1| GTP diphosphokinase [Klebsiella pneumoniae 342]
Length = 745
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 652 RIV--DAVWGESYSAGYSLVVRVEANDRSGLLRDITTILANEKVNVLGVASRSDTRQQLA 709
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 710 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 743
>gi|66044538|ref|YP_234379.1| homoserine dehydrogenase [Pseudomonas syringae pv. syringae B728a]
gi|63255245|gb|AAY36341.1| Homoserine dehydrogenase [Pseudomonas syringae pv. syringae B728a]
Length = 463
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 373 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKDVEEHDGLVPMILLTHRV 432
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + + + ++ V
Sbjct: 433 VEQRINDAIQALEALQDV 450
>gi|324119826|gb|EGC13705.1| RelA/SpoT family protein [Escherichia coli E1167]
Length = 744
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|300923243|ref|ZP_07139297.1| GTP diphosphokinase [Escherichia coli MS 182-1]
gi|300420482|gb|EFK03793.1| GTP diphosphokinase [Escherichia coli MS 182-1]
Length = 744
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|293412131|ref|ZP_06654854.1| relA [Escherichia coli B354]
gi|291468902|gb|EFF11393.1| relA [Escherichia coli B354]
Length = 744
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|257877489|ref|ZP_05657142.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus EC20]
gi|257811655|gb|EEV40475.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus
casseliflavus EC20]
Length = 388
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 22/71 (30%), Gaps = 3/71 (4%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ + + + + D G + I+ E G++I + R
Sbjct: 289 AGTIQESVNFPHAELPF-LAPYRLALFYHDKPGAFAPLLRIISEAGVDIDNLASERKA-- 345
Query: 63 EHAISFLCIDG 73
A + + +D
Sbjct: 346 GVAYTLIDLDE 356
>gi|258405608|ref|YP_003198350.1| PAS modulated sigma54 specific transcriptional regulator, Fis
family [Desulfohalobium retbaense DSM 5692]
gi|257797835|gb|ACV68772.1| PAS modulated sigma54 specific transcriptional regulator, Fis
family [Desulfohalobium retbaense DSM 5692]
Length = 525
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 27/74 (36%), Gaps = 5/74 (6%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI---LNSVLEK 82
+ ++ D +GI+ + +LGE INI + S + + + ++ +
Sbjct: 4 LQLIFRDRVGIIADITAMLGEDSINILSMEV--DASGDRTFVYFETQAEDLCSSDDLMRR 61
Query: 83 LSVNVTIRFVKQFE 96
L + +
Sbjct: 62 LKEIPGLLEISTIR 75
>gi|167032088|ref|YP_001667319.1| homoserine dehydrogenase [Pseudomonas putida GB-1]
gi|166858576|gb|ABY96983.1| Homoserine dehydrogenase [Pseudomonas putida GB-1]
Length = 434
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 3/88 (3%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L G
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEAEEQDGLVPMILLTHGV 403
Query: 75 ILNSVLEKLSVNVTIRFV--KQFEFNVD 100
+ + + + ++ V K V+
Sbjct: 404 VEQRINDAIIALEALQDVVGKVVRIRVE 431
>gi|187731760|ref|YP_001881475.1| GDP/GTP pyrophosphokinase [Shigella boydii CDC 3083-94]
gi|187428752|gb|ACD08026.1| GTP diphosphokinase [Shigella boydii CDC 3083-94]
Length = 744
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|302185531|ref|ZP_07262204.1| homoserine dehydrogenase [Pseudomonas syringae pv. syringae 642]
Length = 434
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEHDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + + + + V
Sbjct: 404 VEQRINDAIQALEALHDV 421
>gi|147562|gb|AAA03237.1| ATP:GTP 3'-pyrophosphotransferase [Escherichia coli]
Length = 744
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|237729747|ref|ZP_04560228.1| GDP/GTP pyrophosphokinase [Citrobacter sp. 30_2]
gi|226908353|gb|EEH94271.1| GDP/GTP pyrophosphokinase [Citrobacter sp. 30_2]
Length = 744
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|110806550|ref|YP_690070.1| GDP/GTP pyrophosphokinase [Shigella flexneri 5 str. 8401]
gi|110616098|gb|ABF04765.1| GTP pyrophosphokinase [Shigella flexneri 5 str. 8401]
Length = 744
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRNGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|15803305|ref|NP_289338.1| GDP/GTP pyrophosphokinase [Escherichia coli O157:H7 EDL933]
gi|15832898|ref|NP_311671.1| GDP/GTP pyrophosphokinase [Escherichia coli O157:H7 str. Sakai]
gi|16130691|ref|NP_417264.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli str.
K-12 substr. MG1655]
gi|24114068|ref|NP_708578.1| GDP/GTP pyrophosphokinase [Shigella flexneri 2a str. 301]
gi|26249185|ref|NP_755225.1| GDP/GTP pyrophosphokinase [Escherichia coli CFT073]
gi|30064129|ref|NP_838300.1| GDP/GTP pyrophosphokinase [Shigella flexneri 2a str. 2457T]
gi|74313356|ref|YP_311775.1| GDP/GTP pyrophosphokinase [Shigella sonnei Ss046]
gi|82545083|ref|YP_409030.1| GDP/GTP pyrophosphokinase [Shigella boydii Sb227]
gi|82778166|ref|YP_404515.1| GDP/GTP pyrophosphokinase [Shigella dysenteriae Sd197]
gi|89109570|ref|AP_003350.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli str.
K-12 substr. W3110]
gi|91212151|ref|YP_542137.1| GDP/GTP pyrophosphokinase [Escherichia coli UTI89]
gi|117625012|ref|YP_854000.1| GDP/GTP pyrophosphokinase [Escherichia coli APEC O1]
gi|157157706|ref|YP_001464106.1| GDP/GTP pyrophosphokinase [Escherichia coli E24377A]
gi|168758475|ref|ZP_02783482.1| GTP diphosphokinase [Escherichia coli O157:H7 str. EC4401]
gi|168778772|ref|ZP_02803779.1| GTP diphosphokinase [Escherichia coli O157:H7 str. EC4076]
gi|168788042|ref|ZP_02813049.1| GTP diphosphokinase [Escherichia coli O157:H7 str. EC869]
gi|170018970|ref|YP_001723924.1| GDP/GTP pyrophosphokinase [Escherichia coli ATCC 8739]
gi|188496203|ref|ZP_03003473.1| GTP pyrophosphokinase [Escherichia coli 53638]
gi|193071116|ref|ZP_03052041.1| GTP diphosphokinase [Escherichia coli E110019]
gi|194426394|ref|ZP_03058949.1| GTP diphosphokinase [Escherichia coli B171]
gi|194434677|ref|ZP_03066931.1| GTP diphosphokinase [Shigella dysenteriae 1012]
gi|194439649|ref|ZP_03071720.1| GTP diphosphokinase [Escherichia coli 101-1]
gi|195936386|ref|ZP_03081768.1| GDP/GTP pyrophosphokinase [Escherichia coli O157:H7 str. EC4024]
gi|208813823|ref|ZP_03255152.1| GTP diphosphokinase [Escherichia coli O157:H7 str. EC4045]
gi|208818842|ref|ZP_03259162.1| GTP diphosphokinase [Escherichia coli O157:H7 str. EC4042]
gi|209400075|ref|YP_002272249.1| GTP diphosphokinase [Escherichia coli O157:H7 str. EC4115]
gi|209920233|ref|YP_002294317.1| GDP/GTP pyrophosphokinase [Escherichia coli SE11]
gi|215488101|ref|YP_002330532.1| GDP/GTP pyrophosphokinase [Escherichia coli O127:H6 str. E2348/69]
gi|217327550|ref|ZP_03443633.1| GTP diphosphokinase [Escherichia coli O157:H7 str. TW14588]
gi|218559772|ref|YP_002392685.1| GDP/GTP pyrophosphokinase [Escherichia coli S88]
gi|218690907|ref|YP_002399119.1| GDP/GTP pyrophosphokinase [Escherichia coli ED1a]
gi|218696383|ref|YP_002404050.1| GDP/GTP pyrophosphokinase [Escherichia coli 55989]
gi|218701500|ref|YP_002409129.1| GDP/GTP pyrophosphokinase [Escherichia coli IAI39]
gi|218706280|ref|YP_002413799.1| GDP/GTP pyrophosphokinase [Escherichia coli UMN026]
gi|227888322|ref|ZP_04006127.1| GDP/GTP pyrophosphokinase [Escherichia coli 83972]
gi|237706588|ref|ZP_04537069.1| GTP pyrophosphokinase [Escherichia sp. 3_2_53FAA]
gi|253772365|ref|YP_003035196.1| GDP/GTP pyrophosphokinase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254037834|ref|ZP_04871892.1| GTP diphosphokinase [Escherichia sp. 1_1_43]
gi|254162710|ref|YP_003045818.1| GDP/GTP pyrophosphokinase [Escherichia coli B str. REL606]
gi|254794726|ref|YP_003079563.1| GDP/GTP pyrophosphokinase [Escherichia coli O157:H7 str. TW14359]
gi|256019429|ref|ZP_05433294.1| GDP/GTP pyrophosphokinase [Shigella sp. D9]
gi|256024713|ref|ZP_05438578.1| GDP/GTP pyrophosphokinase [Escherichia sp. 4_1_40B]
gi|260845430|ref|YP_003223208.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
O103:H2 str. 12009]
gi|260856894|ref|YP_003230785.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
O26:H11 str. 11368]
gi|260869463|ref|YP_003235865.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
O111:H- str. 11128]
gi|261226083|ref|ZP_05940364.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
O157:H7 str. FRIK2000]
gi|261256662|ref|ZP_05949195.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
O157:H7 str. FRIK966]
gi|291284113|ref|YP_003500931.1| GTP diphosphokinase [Escherichia coli O55:H7 str. CB9615]
gi|293406276|ref|ZP_06650202.1| relA [Escherichia coli FVEC1412]
gi|293416031|ref|ZP_06658671.1| relA [Escherichia coli B185]
gi|293449110|ref|ZP_06663531.1| relA [Escherichia coli B088]
gi|297518508|ref|ZP_06936894.1| GDP/GTP pyrophosphokinase [Escherichia coli OP50]
gi|298382013|ref|ZP_06991610.1| relA [Escherichia coli FVEC1302]
gi|300815799|ref|ZP_07096023.1| GTP diphosphokinase [Escherichia coli MS 107-1]
gi|300820570|ref|ZP_07100721.1| GTP diphosphokinase [Escherichia coli MS 119-7]
gi|300898162|ref|ZP_07116524.1| GTP diphosphokinase [Escherichia coli MS 198-1]
gi|300906691|ref|ZP_07124379.1| GTP diphosphokinase [Escherichia coli MS 84-1]
gi|300920363|ref|ZP_07136800.1| GTP diphosphokinase [Escherichia coli MS 115-1]
gi|300931242|ref|ZP_07146582.1| GTP diphosphokinase [Escherichia coli MS 187-1]
gi|300936301|ref|ZP_07151233.1| GTP diphosphokinase [Escherichia coli MS 21-1]
gi|300950512|ref|ZP_07164422.1| GTP diphosphokinase [Escherichia coli MS 116-1]
gi|300958098|ref|ZP_07170258.1| GTP diphosphokinase [Escherichia coli MS 175-1]
gi|300976050|ref|ZP_07173265.1| GTP diphosphokinase [Escherichia coli MS 45-1]
gi|301026291|ref|ZP_07189746.1| GTP diphosphokinase [Escherichia coli MS 196-1]
gi|301049459|ref|ZP_07196417.1| GTP diphosphokinase [Escherichia coli MS 185-1]
gi|301304552|ref|ZP_07210662.1| GTP diphosphokinase [Escherichia coli MS 124-1]
gi|301325724|ref|ZP_07219181.1| GTP diphosphokinase [Escherichia coli MS 78-1]
gi|301645252|ref|ZP_07245204.1| GTP diphosphokinase [Escherichia coli MS 146-1]
gi|306812336|ref|ZP_07446534.1| GDP/GTP pyrophosphokinase [Escherichia coli NC101]
gi|307139470|ref|ZP_07498826.1| GDP/GTP pyrophosphokinase [Escherichia coli H736]
gi|307312787|ref|ZP_07592417.1| (p)ppGpp synthetase I, SpoT/RelA [Escherichia coli W]
gi|309786101|ref|ZP_07680730.1| GTP pyrophosphokinase [Shigella dysenteriae 1617]
gi|309795250|ref|ZP_07689669.1| GTP diphosphokinase [Escherichia coli MS 145-7]
gi|312973000|ref|ZP_07787173.1| GTP pyrophosphokinase [Escherichia coli 1827-70]
gi|331643469|ref|ZP_08344600.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
H736]
gi|331648509|ref|ZP_08349597.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
M605]
gi|331654267|ref|ZP_08355267.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
M718]
gi|331664344|ref|ZP_08365250.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
TA143]
gi|331669518|ref|ZP_08370364.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
TA271]
gi|331678761|ref|ZP_08379435.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
H591]
gi|331684404|ref|ZP_08384996.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
H299]
gi|84027855|sp|P0AG22|RELA_ECO57 RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|84027856|sp|P0AG21|RELA_ECOL6 RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|84027857|sp|P0AG20|RELA_ECOLI RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|84027858|sp|P0AG23|RELA_SHIFL RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|12517256|gb|AAG57897.1|AE005506_5 (p)ppGpp synthetase I (GTP pyrophosphokinase); regulation of RNA
synthesis; stringent factor [Escherichia coli O157:H7
str. EDL933]
gi|26109592|gb|AAN81795.1|AE016765_197 GTP pyrophosphokinase [Escherichia coli CFT073]
gi|882678|gb|AAA69294.1| GTP pyrophosphokinase [Escherichia coli str. K-12 substr. MG1655]
gi|1789147|gb|AAC75826.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli str.
K-12 substr. MG1655]
gi|13363115|dbj|BAB37067.1| (p)ppGpp synthetase I [Escherichia coli O157:H7 str. Sakai]
gi|24053195|gb|AAN44285.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Shigella flexneri 2a
str. 301]
gi|30042385|gb|AAP18110.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Shigella flexneri 2a
str. 2457T]
gi|73671314|gb|AAZ80068.1| RelA [Escherichia coli LW1655F+]
gi|73856833|gb|AAZ89540.1| (p)ppGpp synthetase I [Shigella sonnei Ss046]
gi|81242314|gb|ABB63024.1| (p)ppGpp synthetase I [Shigella dysenteriae Sd197]
gi|81246494|gb|ABB67202.1| (p)ppGpp synthetase I [Shigella boydii Sb227]
gi|85675603|dbj|BAE76858.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli str.
K12 substr. W3110]
gi|91073725|gb|ABE08606.1| GTP pyrophosphokinase [Escherichia coli UTI89]
gi|115514136|gb|ABJ02211.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli APEC
O1]
gi|157079736|gb|ABV19444.1| GTP diphosphokinase [Escherichia coli E24377A]
gi|169753898|gb|ACA76597.1| (p)ppGpp synthetase I, SpoT/RelA [Escherichia coli ATCC 8739]
gi|188491402|gb|EDU66505.1| GTP pyrophosphokinase [Escherichia coli 53638]
gi|189003199|gb|EDU72185.1| GTP diphosphokinase [Escherichia coli O157:H7 str. EC4076]
gi|189354713|gb|EDU73132.1| GTP diphosphokinase [Escherichia coli O157:H7 str. EC4401]
gi|189372141|gb|EDU90557.1| GTP diphosphokinase [Escherichia coli O157:H7 str. EC869]
gi|192955577|gb|EDV86055.1| GTP diphosphokinase [Escherichia coli E110019]
gi|194415702|gb|EDX31969.1| GTP diphosphokinase [Escherichia coli B171]
gi|194417074|gb|EDX33189.1| GTP diphosphokinase [Shigella dysenteriae 1012]
gi|194421396|gb|EDX37412.1| GTP diphosphokinase [Escherichia coli 101-1]
gi|208735100|gb|EDZ83787.1| GTP diphosphokinase [Escherichia coli O157:H7 str. EC4045]
gi|208738965|gb|EDZ86647.1| GTP diphosphokinase [Escherichia coli O157:H7 str. EC4042]
gi|209161475|gb|ACI38908.1| GTP diphosphokinase [Escherichia coli O157:H7 str. EC4115]
gi|209761448|gb|ACI79036.1| (p)ppGpp synthetase I [Escherichia coli]
gi|209761450|gb|ACI79037.1| (p)ppGpp synthetase I [Escherichia coli]
gi|209761452|gb|ACI79038.1| (p)ppGpp synthetase I [Escherichia coli]
gi|209761454|gb|ACI79039.1| (p)ppGpp synthetase I [Escherichia coli]
gi|209761456|gb|ACI79040.1| (p)ppGpp synthetase I [Escherichia coli]
gi|209913492|dbj|BAG78566.1| GTP pyrophosphokinase [Escherichia coli SE11]
gi|215266173|emb|CAS10599.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
O127:H6 str. E2348/69]
gi|217319917|gb|EEC28342.1| GTP diphosphokinase [Escherichia coli O157:H7 str. TW14588]
gi|218353115|emb|CAU98942.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
55989]
gi|218366541|emb|CAR04294.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli S88]
gi|218371486|emb|CAR19322.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
IAI39]
gi|218428471|emb|CAR09397.2| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli ED1a]
gi|218433377|emb|CAR14279.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
UMN026]
gi|222034475|emb|CAP77217.1| GTP pyrophosphokinase [Escherichia coli LF82]
gi|226839458|gb|EEH71479.1| GTP diphosphokinase [Escherichia sp. 1_1_43]
gi|226899628|gb|EEH85887.1| GTP pyrophosphokinase [Escherichia sp. 3_2_53FAA]
gi|227834591|gb|EEJ45057.1| GDP/GTP pyrophosphokinase [Escherichia coli 83972]
gi|242378331|emb|CAQ33108.1| GTP pyrophosphokinase / GDP pyrophosphokinase [Escherichia coli
BL21(DE3)]
gi|253323409|gb|ACT28011.1| (p)ppGpp synthetase I, SpoT/RelA [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974611|gb|ACT40282.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli B
str. REL606]
gi|253978776|gb|ACT44446.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
BL21(DE3)]
gi|254594126|gb|ACT73487.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
O157:H7 str. TW14359]
gi|257755543|dbj|BAI27045.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
O26:H11 str. 11368]
gi|257760577|dbj|BAI32074.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
O103:H2 str. 12009]
gi|257765819|dbj|BAI37314.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
O111:H- str. 11128]
gi|260448165|gb|ACX38587.1| (p)ppGpp synthetase I, SpoT/RelA [Escherichia coli DH1]
gi|281179785|dbj|BAI56115.1| GTP pyrophosphokinase [Escherichia coli SE15]
gi|281602144|gb|ADA75128.1| GTP pyrophosphokinase [Shigella flexneri 2002017]
gi|284922721|emb|CBG35809.1| GTP pyrophosphokinase [Escherichia coli 042]
gi|290763986|gb|ADD57947.1| GTP diphosphokinase [Escherichia coli O55:H7 str. CB9615]
gi|291322200|gb|EFE61629.1| relA [Escherichia coli B088]
gi|291426282|gb|EFE99314.1| relA [Escherichia coli FVEC1412]
gi|291432220|gb|EFF05202.1| relA [Escherichia coli B185]
gi|294489801|gb|ADE88557.1| GTP diphosphokinase [Escherichia coli IHE3034]
gi|298277153|gb|EFI18669.1| relA [Escherichia coli FVEC1302]
gi|299879750|gb|EFI87961.1| GTP diphosphokinase [Escherichia coli MS 196-1]
gi|300298690|gb|EFJ55075.1| GTP diphosphokinase [Escherichia coli MS 185-1]
gi|300315218|gb|EFJ65002.1| GTP diphosphokinase [Escherichia coli MS 175-1]
gi|300358137|gb|EFJ74007.1| GTP diphosphokinase [Escherichia coli MS 198-1]
gi|300401526|gb|EFJ85064.1| GTP diphosphokinase [Escherichia coli MS 84-1]
gi|300410147|gb|EFJ93685.1| GTP diphosphokinase [Escherichia coli MS 45-1]
gi|300412626|gb|EFJ95936.1| GTP diphosphokinase [Escherichia coli MS 115-1]
gi|300450172|gb|EFK13792.1| GTP diphosphokinase [Escherichia coli MS 116-1]
gi|300458553|gb|EFK22046.1| GTP diphosphokinase [Escherichia coli MS 21-1]
gi|300460896|gb|EFK24389.1| GTP diphosphokinase [Escherichia coli MS 187-1]
gi|300526834|gb|EFK47903.1| GTP diphosphokinase [Escherichia coli MS 119-7]
gi|300531728|gb|EFK52790.1| GTP diphosphokinase [Escherichia coli MS 107-1]
gi|300840156|gb|EFK67916.1| GTP diphosphokinase [Escherichia coli MS 124-1]
gi|300847474|gb|EFK75234.1| GTP diphosphokinase [Escherichia coli MS 78-1]
gi|301076455|gb|EFK91261.1| GTP diphosphokinase [Escherichia coli MS 146-1]
gi|305854374|gb|EFM54812.1| GDP/GTP pyrophosphokinase [Escherichia coli NC101]
gi|306907222|gb|EFN37728.1| (p)ppGpp synthetase I, SpoT/RelA [Escherichia coli W]
gi|307554756|gb|ADN47531.1| GTP pyrophosphokinase [Escherichia coli ABU 83972]
gi|308121221|gb|EFO58483.1| GTP diphosphokinase [Escherichia coli MS 145-7]
gi|308926212|gb|EFP71690.1| GTP pyrophosphokinase [Shigella dysenteriae 1617]
gi|309703142|emb|CBJ02476.1| GTP pyrophosphokinase [Escherichia coli ETEC H10407]
gi|310332942|gb|EFQ00156.1| GTP pyrophosphokinase [Escherichia coli 1827-70]
gi|312947311|gb|ADR28138.1| GDP/GTP pyrophosphokinase [Escherichia coli O83:H1 str. NRG 857C]
gi|313647844|gb|EFS12290.1| GTP pyrophosphokinase [Shigella flexneri 2a str. 2457T]
gi|315062066|gb|ADT76393.1| (p) ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli W]
gi|315137391|dbj|BAJ44550.1| GTP diphosphokinase [Escherichia coli DH1]
gi|315256643|gb|EFU36611.1| GTP diphosphokinase [Escherichia coli MS 85-1]
gi|315289303|gb|EFU48698.1| GTP diphosphokinase [Escherichia coli MS 110-3]
gi|315293743|gb|EFU53095.1| GTP diphosphokinase [Escherichia coli MS 153-1]
gi|315298723|gb|EFU57977.1| GTP diphosphokinase [Escherichia coli MS 16-3]
gi|315615170|gb|EFU95807.1| GTP pyrophosphokinase [Escherichia coli 3431]
gi|320173232|gb|EFW48442.1| GTP pyrophosphokinase ppGpp synthetase I [Shigella dysenteriae CDC
74-1112]
gi|320182396|gb|EFW57293.1| GTP pyrophosphokinase ppGpp synthetase I [Shigella boydii ATCC
9905]
gi|320183551|gb|EFW58397.1| GTP pyrophosphokinase ppGpp synthetase I [Shigella flexneri CDC
796-83]
gi|320189117|gb|EFW63776.1| GTP pyrophosphokinase ppGpp synthetase I [Escherichia coli O157:H7
str. EC1212]
gi|320194923|gb|EFW69552.1| GTP pyrophosphokinase ppGpp synthetase I [Escherichia coli
WV_060327]
gi|320640432|gb|EFX09971.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
O157:H7 str. G5101]
gi|320645679|gb|EFX14664.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
O157:H- str. 493-89]
gi|320650979|gb|EFX19419.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
O157:H- str. H 2687]
gi|320656475|gb|EFX24371.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320662371|gb|EFX29768.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
O55:H7 str. USDA 5905]
gi|323154828|gb|EFZ41021.1| GTP pyrophosphokinase [Escherichia coli EPECa14]
gi|323159901|gb|EFZ45871.1| GTP pyrophosphokinase [Escherichia coli E128010]
gi|323172913|gb|EFZ58544.1| GTP pyrophosphokinase [Escherichia coli LT-68]
gi|323180214|gb|EFZ65766.1| GTP pyrophosphokinase [Escherichia coli 1180]
gi|323183323|gb|EFZ68720.1| GTP pyrophosphokinase [Escherichia coli 1357]
gi|323188800|gb|EFZ74085.1| GTP pyrophosphokinase [Escherichia coli RN587/1]
gi|323377351|gb|ADX49619.1| (p)ppGpp synthetase I, SpoT/RelA [Escherichia coli KO11]
gi|323941535|gb|EGB37717.1| RelA/SpoT family protein [Escherichia coli E482]
gi|323946493|gb|EGB42519.1| RelA/SpoT family protein [Escherichia coli H120]
gi|323950999|gb|EGB46875.1| RelA/SpoT family protein [Escherichia coli H252]
gi|323957204|gb|EGB52928.1| RelA/SpoT family protein [Escherichia coli H263]
gi|323960698|gb|EGB56322.1| RelA/SpoT family protein [Escherichia coli H489]
gi|324005668|gb|EGB74887.1| GTP diphosphokinase [Escherichia coli MS 57-2]
gi|324016363|gb|EGB85582.1| GTP diphosphokinase [Escherichia coli MS 117-3]
gi|326339144|gb|EGD62959.1| GTP pyrophosphokinase ppGpp synthetase I [Escherichia coli O157:H7
str. 1044]
gi|326342973|gb|EGD66741.1| GTP pyrophosphokinase ppGpp synthetase I [Escherichia coli O157:H7
str. 1125]
gi|330908810|gb|EGH37324.1| GTP pyrophosphokinase , (p)ppGpp synthetase 1 [Escherichia coli
AA86]
gi|331036940|gb|EGI09164.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
H736]
gi|331042256|gb|EGI14398.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
M605]
gi|331047649|gb|EGI19726.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
M718]
gi|331058275|gb|EGI30256.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
TA143]
gi|331063186|gb|EGI35099.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
TA271]
gi|331073591|gb|EGI44912.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
H591]
gi|331078019|gb|EGI49225.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
H299]
gi|332087563|gb|EGI92691.1| GTP pyrophosphokinase [Shigella boydii 5216-82]
gi|332089089|gb|EGI94199.1| GTP pyrophosphokinase [Shigella dysenteriae 155-74]
gi|332091972|gb|EGI97050.1| GTP pyrophosphokinase [Shigella boydii 3594-74]
gi|332102901|gb|EGJ06247.1| GDP/GTP pyrophosphokinase [Shigella sp. D9]
Length = 744
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|320667069|gb|EFX34032.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli
O157:H7 str. LSU-61]
Length = 744
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|170682452|ref|YP_001744946.1| GDP/GTP pyrophosphokinase [Escherichia coli SMS-3-5]
gi|170520170|gb|ACB18348.1| GTP diphosphokinase [Escherichia coli SMS-3-5]
Length = 744
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|302339244|ref|YP_003804450.1| acetolactate synthase, small subunit [Spirochaeta smaragdinae DSM
11293]
gi|301636429|gb|ADK81856.1| acetolactate synthase, small subunit [Spirochaeta smaragdinae DSM
11293]
Length = 166
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I I+ D G++ + + G NI +G ++ + + + D ++L V +
Sbjct: 3 HTISILCDDTPGVMTRISGLFSRRGFNIESLAVGNTEIKGKSRFTIVVSGDDAVLEQVRK 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLQKLVHVIKV 73
>gi|84490218|ref|YP_448450.1| EhbQ [Methanosphaera stadtmanae DSM 3091]
gi|84373537|gb|ABC57807.1| EhbQ [Methanosphaera stadtmanae DSM 3091]
Length = 216
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG-SILNSVLEKLSVNVTI 89
D G++ V + L + GINI + HL +S +HA +++ +D + VL ++ +
Sbjct: 10 IDKPGVLRKVTDYLAKNGINIVYTHLY-MESDDHASTYIELDHVDNIEEVLSEIMEFPEV 68
Query: 90 RFVKQ 94
+ VK
Sbjct: 69 KEVKL 73
>gi|110642925|ref|YP_670655.1| GDP/GTP pyrophosphokinase [Escherichia coli 536]
gi|191171289|ref|ZP_03032839.1| GTP diphosphokinase [Escherichia coli F11]
gi|300976309|ref|ZP_07173373.1| GTP diphosphokinase [Escherichia coli MS 200-1]
gi|331658895|ref|ZP_08359837.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
TA206]
gi|110344517|gb|ABG70754.1| GTP pyrophosphokinase [Escherichia coli 536]
gi|190908589|gb|EDV68178.1| GTP diphosphokinase [Escherichia coli F11]
gi|300308551|gb|EFJ63071.1| GTP diphosphokinase [Escherichia coli MS 200-1]
gi|324015534|gb|EGB84753.1| GTP diphosphokinase [Escherichia coli MS 60-1]
gi|331053477|gb|EGI25506.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Escherichia coli
TA206]
Length = 744
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|152965304|ref|YP_001361088.1| acetolactate synthase, small subunit [Kineococcus radiotolerans
SRS30216]
gi|151359821|gb|ABS02824.1| acetolactate synthase, small subunit [Kineococcus radiotolerans
SRS30216]
Length = 170
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 9/78 (11%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNS 78
+ + + ++ + G+++ V ++ NI +G ++ ++ + + ++ L
Sbjct: 1 MSQHTLSVLVENRPGVLMRVTSLFARRNFNIHSLTVGPTERSDISRMTIVVDVESQPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ + + + + E
Sbjct: 61 VTKQLNKLINVLKIVELE 78
>gi|323978605|gb|EGB73687.1| RelA/SpoT family protein [Escherichia coli TW10509]
Length = 744
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVLANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|227114810|ref|ZP_03828466.1| GDP/GTP pyrophosphokinase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 744
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 7/91 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSSGYSLVVRVIANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVK 93
+ I+ +L+ +L KL+ + +
Sbjct: 709 TIDMDIEIYNLQVLSRILAKLNQLPDVIDAR 739
>gi|88858178|ref|ZP_01132820.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Pseudoalteromonas
tunicata D2]
gi|88819795|gb|EAR29608.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Pseudoalteromonas
tunicata D2]
Length = 721
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLS 84
I D G++ + +L IN+ + ++ + AI + + D +N VL K++
Sbjct: 650 IEANDRPGLIRDISGVLANERINVQNMNVRTLSEQQLAIFEMKLEVADIETMNRVLGKIA 709
Query: 85 VNVTIRFV 92
+
Sbjct: 710 QIEGVYEA 717
>gi|323966762|gb|EGB62193.1| RelA/SpoT family protein [Escherichia coli M863]
gi|327251522|gb|EGE63208.1| GTP pyrophosphokinase [Escherichia coli STEC_7v]
Length = 744
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|311278257|ref|YP_003940488.1| (p)ppGpp synthetase I, SpoT/RelA [Enterobacter cloacae SCF1]
gi|308747452|gb|ADO47204.1| (p)ppGpp synthetase I, SpoT/RelA [Enterobacter cloacae SCF1]
Length = 743
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 650 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 707
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 708 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 741
>gi|218555335|ref|YP_002388248.1| GDP/GTP pyrophosphokinase [Escherichia coli IAI1]
gi|218362103|emb|CAQ99712.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Escherichia coli IAI1]
Length = 744
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|157162238|ref|YP_001459556.1| GDP/GTP pyrophosphokinase [Escherichia coli HS]
gi|157067918|gb|ABV07173.1| GTP diphosphokinase [Escherichia coli HS]
Length = 744
Score = 44.6 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|296817323|ref|XP_002848998.1| D-3-phosphoglycerate dehydrogenase 2 [Arthroderma otae CBS 113480]
gi|238839451|gb|EEQ29113.1| D-3-phosphoglycerate dehydrogenase 2 [Arthroderma otae CBS 113480]
Length = 474
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 28/79 (35%), Gaps = 7/79 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSIL 76
+ I ++ ++ G++ V ILG++ ++ + A +D +
Sbjct: 399 EPNHARIIFIHNNVPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMADVSSVDSDNI 454
Query: 77 NSVLEKLSVNVTIRFVKQF 95
+ ++L + +
Sbjct: 455 KDLYDQLEGLSSRIMTRIL 473
>gi|302038556|ref|YP_003798878.1| GTP pyrophosphokinase [Candidatus Nitrospira defluvii]
gi|300606620|emb|CBK42953.1| GTP pyrophosphokinase [Candidatus Nitrospira defluvii]
Length = 727
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSV 85
++ D G++ V + E NI+ + + + + F+ +D + L VL+ +
Sbjct: 651 VIAVDKTGVLAHVSTAISECQANISRAEITTREDRKAMLDFIIEVLDTAHLARVLKAIEK 710
Query: 86 NVTIRFVKQFE 96
I V++
Sbjct: 711 VDGIITVRRVR 721
>gi|146312877|ref|YP_001177951.1| GDP/GTP pyrophosphokinase [Enterobacter sp. 638]
gi|145319753|gb|ABP61900.1| (p)ppGpp synthetase I, SpoT/RelA [Enterobacter sp. 638]
Length = 743
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 650 RIV--DAVWGESYSAGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTREQLA 707
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 708 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 741
>gi|71278857|ref|YP_270770.1| GTP pyrophosphokinase [Colwellia psychrerythraea 34H]
gi|71144597|gb|AAZ25070.1| GTP pyrophosphokinase [Colwellia psychrerythraea 34H]
Length = 737
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN---SVLEKLS 84
I+ +D G++ + I+ ++I + + L ++ VL+KL
Sbjct: 667 IIGSDRQGLLRDISTIIANERVSIVGMDSHTDKVKQTMSMNLKLEVESSELLTRVLDKLR 726
Query: 85 VNVTIRFVKQF 95
+ V++
Sbjct: 727 QLDDVTQVRRL 737
>gi|15807643|ref|NP_295240.1| acetolactate synthase, small subunit [Deinococcus radiodurans R1]
Length = 187
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ I+ D ++ + + G G NI +G+++ + + + D ++ +
Sbjct: 13 HLLSILVLDEPRVLTRITALFGRRGYNIKSLSVGQTEHPGVSRMTIVVHGDRGVVQQAMH 72
Query: 82 KLSVNVTIRFV 92
+L + V
Sbjct: 73 QLEKLHDVVKV 83
>gi|84498260|ref|ZP_00997057.1| acetolactate synthase I small subunit [Janibacter sp. HTCC2649]
gi|84381760|gb|EAP97643.1| acetolactate synthase I small subunit [Janibacter sp. HTCC2649]
Length = 170
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNS 78
+ + + ++ + G++ + + G NI +G ++ + + + +D L
Sbjct: 1 MSQHTLSVLVENKPGVLARIAGLFARRGFNIHSLAVGETEHNDISRITVVVDVDELPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFEFNVD 100
V ++L+ V + V E + +
Sbjct: 61 VTKQLNKLVEVLKV--VELDAN 80
>gi|94967206|ref|YP_589254.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Candidatus Koribacter versatilis Ellin345]
gi|94549256|gb|ABF39180.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Candidatus Koribacter versatilis Ellin345]
Length = 740
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKLSVNVTI 89
D G++ + +I+ + NI + + + I D L ++ + +
Sbjct: 672 DDRPGMLKQITSIISDANTNIRNIEAHTGDAHATIDVIIDIEDLKHLERMITGIRKIPGV 731
Query: 90 RFVKQFE 96
R V++ +
Sbjct: 732 RDVQRVQ 738
>gi|309792319|ref|ZP_07686789.1| malate dehydrogenase [Oscillochloris trichoides DG6]
gi|308225634|gb|EFO79392.1| malate dehydrogenase [Oscillochloris trichoides DG6]
Length = 469
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEK 82
+ + G++ + I+GE+G +I + R++ +D + ++
Sbjct: 6 TLRCEIQNQPGMLGRITTIIGEHGGDIGAIDIVRAERGLVVRDITVRVLDENHGERLVTA 65
Query: 83 LSVNVTIRFVKQ 94
++ +R ++
Sbjct: 66 INTTPGVRVIRV 77
>gi|170723310|ref|YP_001750998.1| homoserine dehydrogenase [Pseudomonas putida W619]
gi|169761313|gb|ACA74629.1| Homoserine dehydrogenase [Pseudomonas putida W619]
Length = 434
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 3/88 (3%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACQSAYYLRIHAKDHPGVLAQVASILSERGINIESIMQKEVEEQDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVTIRFV--KQFEFNVD 100
+ S+ + + ++ V K V+
Sbjct: 404 VEQSINDAIVALEALQDVVGKVVRIRVE 431
>gi|330872805|gb|EGH06954.1| homoserine dehydrogenase [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 434
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEHDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + + + ++ V
Sbjct: 404 VEQRINDAIQALEALQDV 421
>gi|77359690|ref|YP_339265.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Pseudoalteromonas
haloplanktis TAC125]
gi|76874601|emb|CAI85822.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Pseudoalteromonas
haloplanktis TAC125]
Length = 718
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLS 84
I +D G++ + +L +N+ + ++ + AI + I D S N VL KL
Sbjct: 647 IEASDRSGLIRDISVVLANEKVNVLNMNVNTVDDNQIAIFTMQIEVHDLSGTNRVLSKLH 706
Query: 85 VNVTIRFVK 93
+ K
Sbjct: 707 QIEGVHSAK 715
>gi|328885053|emb|CCA58292.1| Homoserine dehydrogenase [Streptomyces venezuelae ATCC 10712]
Length = 430
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNVT 88
D G++ V + E+G++I + + A + + ++ +E L T
Sbjct: 360 DKPGVLAQVATVFAEHGVSIDT--VRQKGKDGEASLVVVTHRAPDAALSGTVEALRKLDT 417
Query: 89 IRFVKQF 95
+R V
Sbjct: 418 VRGVASI 424
>gi|103488154|ref|YP_617715.1| (p)ppGpp synthetase I, SpoT/RelA [Sphingopyxis alaskensis RB2256]
gi|98978231|gb|ABF54382.1| (p)ppGpp synthetase I, SpoT/RelA [Sphingopyxis alaskensis RB2256]
Length = 700
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
D + G +CIV + G + + IL NI + L + H + + +
Sbjct: 621 DSEGGNARLCIVILNEPGTLAEMSGILAANMANITNLRLSNREGGFHTYDVVVEVRDVQH 680
Query: 78 --SVLEKLSVNVTIRFVKQF 95
+L L + ++ ++
Sbjct: 681 LMRILSALRASDSVVQAERL 700
>gi|60459279|gb|AAX20018.1| homoserine dehydrogenase [Streptomyces clavuligerus]
Length = 433
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNV 87
D G++ V + E+G++I GR S+ A + + ++ +E L
Sbjct: 360 DKPGVLAQVATVFAEHGVSIDTVRQQGRQDSSGEASLVVVTHRAPDAALQGTVEALRSLD 419
Query: 88 TIRFVKQF 95
T+R V
Sbjct: 420 TVRGVASI 427
>gi|294815082|ref|ZP_06773725.1| Homoserine dehydrogenase [Streptomyces clavuligerus ATCC 27064]
gi|326443445|ref|ZP_08218179.1| homoserine dehydrogenase [Streptomyces clavuligerus ATCC 27064]
gi|294327681|gb|EFG09324.1| Homoserine dehydrogenase [Streptomyces clavuligerus ATCC 27064]
Length = 433
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNV 87
D G++ V + E+G++I GR S+ A + + ++ +E L
Sbjct: 360 DKPGVLAQVATVFAEHGVSIDTVRQQGRQDSSGEASLVVVTHRAPDAALQGTVEALRSLD 419
Query: 88 TIRFVKQF 95
T+R V
Sbjct: 420 TVRGVASI 427
>gi|254387530|ref|ZP_05002769.1| homoserine dehydrogenase [Streptomyces clavuligerus ATCC 27064]
gi|197701256|gb|EDY47068.1| homoserine dehydrogenase [Streptomyces clavuligerus ATCC 27064]
Length = 432
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNV 87
D G++ V + E+G++I GR S+ A + + ++ +E L
Sbjct: 359 DKPGVLAQVATVFAEHGVSIDTVRQQGRQDSSGEASLVVVTHRAPDAALQGTVEALRSLD 418
Query: 88 TIRFVKQF 95
T+R V
Sbjct: 419 TVRGVASI 426
>gi|331009226|gb|EGH89282.1| homoserine dehydrogenase [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 434
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEHDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + + + ++ V
Sbjct: 404 VEQRINDAIQALEALQDV 421
>gi|261822785|ref|YP_003260891.1| GDP/GTP pyrophosphokinase [Pectobacterium wasabiae WPP163]
gi|261606798|gb|ACX89284.1| (p)ppGpp synthetase I, SpoT/RelA [Pectobacterium wasabiae WPP163]
Length = 745
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 30/91 (32%), Gaps = 7/91 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 652 RIV--DAVWGESYSSGYSLVVRVIANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 709
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVK 93
+ I+ +L +L KL+ + +
Sbjct: 710 TIDMDIEIYNLQVLGRILAKLNQLPDVIDAR 740
>gi|300721893|ref|YP_003711171.1| (p)ppGpp synthetase I [Xenorhabdus nematophila ATCC 19061]
gi|297628388|emb|CBJ88953.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Xenorhabdus
nematophila ATCC 19061]
Length = 745
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 30/90 (33%), Gaps = 5/90 (5%)
Query: 12 IQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + + + D G++ + IL +N+ + A +
Sbjct: 654 VDAVWGESYSSGYSLVVRVLANDRSGLLRDITTILANEKVNVLGVSSRSDVKQQLATIDM 713
Query: 70 CIDG---SILNSVLEKLSVNVTIRFVKQFE 96
I+ +L VL KL+ + ++
Sbjct: 714 NIEIYNLQVLGRVLAKLNQLPDVIEARRLH 743
>gi|237800090|ref|ZP_04588551.1| homoserine dehydrogenase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022945|gb|EGI03002.1| homoserine dehydrogenase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 434
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEHDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + + + ++ V
Sbjct: 404 VEQRINDAIQALEALQDV 421
>gi|28868687|ref|NP_791306.1| homoserine dehydrogenase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213969062|ref|ZP_03397201.1| homoserine dehydrogenase [Pseudomonas syringae pv. tomato T1]
gi|301384043|ref|ZP_07232461.1| homoserine dehydrogenase [Pseudomonas syringae pv. tomato Max13]
gi|302058749|ref|ZP_07250290.1| homoserine dehydrogenase [Pseudomonas syringae pv. tomato K40]
gi|302131710|ref|ZP_07257700.1| homoserine dehydrogenase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28851926|gb|AAO55001.1| homoserine dehydrogenase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213926060|gb|EEB59616.1| homoserine dehydrogenase [Pseudomonas syringae pv. tomato T1]
gi|331016308|gb|EGH96364.1| homoserine dehydrogenase [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 434
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEHDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + + + ++ V
Sbjct: 404 VEQRINDAIQALEALQDV 421
>gi|330894537|gb|EGH27198.1| homoserine dehydrogenase [Pseudomonas syringae pv. mori str.
301020]
Length = 434
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEHDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + + + ++ V
Sbjct: 404 VEQRINDAIQALEALQDV 421
>gi|257487152|ref|ZP_05641193.1| homoserine dehydrogenase [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|330985054|gb|EGH83157.1| homoserine dehydrogenase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 434
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEHDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + + + ++ V
Sbjct: 404 VEQRINDAIQALEALQDV 421
>gi|71735728|ref|YP_273618.1| homoserine dehydrogenase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|289625889|ref|ZP_06458843.1| homoserine dehydrogenase [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289646213|ref|ZP_06477556.1| homoserine dehydrogenase [Pseudomonas syringae pv. aesculi str.
2250]
gi|298488280|ref|ZP_07006313.1| Homoserine dehydrogenase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|71556281|gb|AAZ35492.1| homoserine dehydrogenase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|298157219|gb|EFH98306.1| Homoserine dehydrogenase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|320323172|gb|EFW79261.1| homoserine dehydrogenase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320329557|gb|EFW85546.1| homoserine dehydrogenase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330867531|gb|EGH02240.1| homoserine dehydrogenase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330874854|gb|EGH09003.1| homoserine dehydrogenase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 434
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEHDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + + + ++ V
Sbjct: 404 VEQRINDAIQALEALQDV 421
>gi|332159344|ref|YP_004424623.1| hypothetical protein PNA2_1705 [Pyrococcus sp. NA2]
gi|331034807|gb|AEC52619.1| hypothetical protein PNA2_1705 [Pyrococcus sp. NA2]
Length = 135
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVN---- 86
D G++ + ILG + INI +S A +D S + L++L
Sbjct: 64 IDRPGVLAKISGILGRHRINILFNESEELESLGMAAIVAIVDVSNSDLSLDELREILERV 123
Query: 87 VTIRFVKQFEF 97
++ VK E
Sbjct: 124 EEVKEVKIIEI 134
>gi|325003702|ref|ZP_08124814.1| acetolactate synthase 3 regulatory subunit [Pseudonocardia sp.
P1]
Length = 169
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ D G++ V + G NI +G ++ + + + +D + V +
Sbjct: 5 HTLSVLVEDKPGVLARVSGLFSRRGFNINSLAVGPTEHPDVSRMTIVVEVDELPMEQVTK 64
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + + + E
Sbjct: 65 QLNKLVHVIKIVELE 79
>gi|296104453|ref|YP_003614599.1| GDP/GTP pyrophosphokinase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295058912|gb|ADF63650.1| GDP/GTP pyrophosphokinase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 743
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 650 RIVE--AVWGESYSAGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTREQLA 707
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 708 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 741
>gi|330975460|gb|EGH75526.1| homoserine dehydrogenase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 193
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 103 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKDVEEHDGLVPMILLTHRV 162
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + + + ++ V
Sbjct: 163 VEQRINDAIQALEALQDV 180
>gi|327450523|gb|EGE97177.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL087PA3]
Length = 396
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I EI I ++ ++ G++ + ++ + G N+ + L E L
Sbjct: 315 VNIPEIT-PSPRTGARIGYLHRNVPGVMATLNRLVADQGGNVTYQALAT--KGELGYCIL 371
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I + +L ++V +
Sbjct: 372 DI-AETDSGLLANVTVLEGTIRARIL 396
>gi|253988312|ref|YP_003039668.1| GDP/GTP pyrophosphokinase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253779762|emb|CAQ82923.1| gtp pyrophosphokinase [Photorhabdus asymbiotica]
Length = 752
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 10/90 (11%), Positives = 30/90 (33%), Gaps = 5/90 (5%)
Query: 12 IQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + + + D G++ + IL +N+ + A +
Sbjct: 661 VDAVWGERYSSGYSLIVRVVANDRSGLLRDITTILANEKVNVLGVSSRSDIKQQIATIDM 720
Query: 70 CIDG---SILNSVLEKLSVNVTIRFVKQFE 96
++ +L +L K++ + K+
Sbjct: 721 DVEIYNLQVLGRILAKINQLPDVIEAKRLH 750
>gi|289425542|ref|ZP_06427319.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
SK187]
gi|289154520|gb|EFD03208.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
SK187]
gi|313764194|gb|EFS35558.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL013PA1]
gi|313791885|gb|EFS39986.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL110PA1]
gi|313801632|gb|EFS42872.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL110PA2]
gi|313816287|gb|EFS54001.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL059PA1]
gi|313838345|gb|EFS76059.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL086PA1]
gi|314915671|gb|EFS79502.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL005PA4]
gi|314917960|gb|EFS81791.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL050PA1]
gi|314920341|gb|EFS84172.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL050PA3]
gi|314931562|gb|EFS95393.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL067PA1]
gi|314955437|gb|EFS99842.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL027PA1]
gi|314957947|gb|EFT02050.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL002PA1]
gi|314962541|gb|EFT06641.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL082PA1]
gi|314967595|gb|EFT11694.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL037PA1]
gi|315098792|gb|EFT70768.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL059PA2]
gi|315101612|gb|EFT73588.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL046PA1]
gi|315108729|gb|EFT80705.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL030PA2]
gi|327453395|gb|EGF00050.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL092PA1]
gi|327454138|gb|EGF00793.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL083PA2]
gi|328752971|gb|EGF66587.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL025PA2]
gi|328753939|gb|EGF67555.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL087PA1]
Length = 396
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I EI I ++ ++ G++ + ++ + G N+ + L E L
Sbjct: 315 VNIPEIT-PSPRTGARIGYLHRNVPGVMATLNRLVADQGGNVTYQALAT--KGELGYCIL 371
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I + +L ++V +
Sbjct: 372 DI-AETDSGLLANVTVLEGTIRARIL 396
>gi|261342211|ref|ZP_05970069.1| GTP diphosphokinase [Enterobacter cancerogenus ATCC 35316]
gi|288315545|gb|EFC54483.1| GTP diphosphokinase [Enterobacter cancerogenus ATCC 35316]
Length = 743
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 650 RIVE--AVWGESYSAGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTREQLA 707
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 708 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 741
>gi|330964082|gb|EGH64342.1| homoserine dehydrogenase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 434
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEHDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + + + ++ V
Sbjct: 404 VEQRINDAIQALEALQDV 421
>gi|315077756|gb|EFT49807.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL053PA2]
Length = 396
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I EI I ++ ++ G++ + ++ + G N+ + L E L
Sbjct: 315 VNIPEIT-PSPRTGARIGYLHRNVPGVMATLNRLVADQGGNVTYQALAT--KGELGYCIL 371
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I + +L ++V +
Sbjct: 372 DI-AETDSGLLANVTVLEGTIRARIL 396
>gi|289428523|ref|ZP_06430207.1| phosphoglycerate dehydrogenase [Propionibacterium acnes J165]
gi|289158217|gb|EFD06436.1| phosphoglycerate dehydrogenase [Propionibacterium acnes J165]
gi|313807775|gb|EFS46262.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL087PA2]
gi|313818811|gb|EFS56525.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL046PA2]
gi|313820585|gb|EFS58299.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL036PA1]
gi|313822611|gb|EFS60325.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL036PA2]
gi|313825455|gb|EFS63169.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL063PA1]
gi|314924948|gb|EFS88779.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL036PA3]
gi|314960526|gb|EFT04628.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL002PA2]
gi|314978697|gb|EFT22791.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL072PA2]
gi|314987864|gb|EFT31955.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL005PA2]
gi|314989675|gb|EFT33766.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL005PA3]
gi|315084712|gb|EFT56688.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL027PA2]
gi|315085396|gb|EFT57372.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL002PA3]
gi|315088545|gb|EFT60521.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL072PA1]
gi|327331685|gb|EGE73422.1| D-3-phosphoglycerate dehydrogenase [Propionibacterium acnes
HL096PA3]
gi|327443461|gb|EGE90115.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL013PA2]
gi|328754673|gb|EGF68289.1| phosphoglycerate dehydrogenase [Propionibacterium acnes HL020PA1]
Length = 396
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I EI I ++ ++ G++ + ++ + G N+ + L E L
Sbjct: 315 VNIPEIT-PSPRTGARIGYLHRNVPGVMATLNRLVADQGGNVTYQALAT--KGELGYCIL 371
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I + +L ++V +
Sbjct: 372 DI-AETDSGLLANVTVLEGTIRARIL 396
>gi|322367913|ref|ZP_08042482.1| putative repressor of tryptophan metabolism TrpY [Haladaptatus
paucihalophilus DX253]
gi|320551929|gb|EFW93574.1| putative repressor of tryptophan metabolism TrpY [Haladaptatus
paucihalophilus DX253]
Length = 167
Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 27/63 (42%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D+ GIV V ++L + I+I + T+ +L D + VL +L +
Sbjct: 104 DVPGIVATVTSLLADNDISIRQTISEDPEFTDDPRLYLVTDEDVPGDVLNELKNLEFVHR 163
Query: 92 VKQ 94
++
Sbjct: 164 IQL 166
>gi|134101006|ref|YP_001106667.1| hypothetical protein SACE_4473 [Saccharopolyspora erythraea NRRL
2338]
gi|291003380|ref|ZP_06561353.1| hypothetical protein SeryN2_02522 [Saccharopolyspora erythraea NRRL
2338]
gi|133913629|emb|CAM03742.1| hypothetical protein SACE_4473 [Saccharopolyspora erythraea NRRL
2338]
Length = 111
Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 40 VGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
V + L E G NI + ++ AI L +D + LE + V R V+ F
Sbjct: 48 VDSALREAGANIHAAAVSQTSGGSDAIMLLRVDRPVHEQALEPIGKAVDARIVRTVSF 105
>gi|159468538|ref|XP_001692431.1| D-3-phosphoglycerate dehydrogenase [Chlamydomonas reinhardtii]
gi|158278144|gb|EDP03909.1| D-3-phosphoglycerate dehydrogenase [Chlamydomonas reinhardtii]
Length = 587
Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 18/44 (40%)
Query: 53 HFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ R+ AI + ID + LE+++ + V F+
Sbjct: 537 FMTVSRTAKDGEAIMAIGIDSEPSPATLEEITRVKGVIEVTIFK 580
>gi|224995212|gb|ACN76693.1| (p)ppGpp synthetase I [Paracoccus sp. TRP]
gi|284080638|gb|ADB77892.1| (p)ppGpp synthetase I [Klebsiella sp. CPK]
Length = 745
Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 652 RIV--DAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDMKQQMA 709
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 710 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 743
>gi|256380013|ref|YP_003103673.1| acetolactate synthase 3 regulatory subunit [Actinosynnema mirum
DSM 43827]
gi|255924316|gb|ACU39827.1| acetolactate synthase, small subunit [Actinosynnema mirum DSM
43827]
Length = 168
Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ D G++ V + G NI +GR++ + + + ++ L V +
Sbjct: 4 HTLSVLVEDKPGVLARVAGLFSRRGFNIESLAVGRTEHPDISRMTIVVAVEELPLEQVTK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + + + E
Sbjct: 64 QLNKLVNVIKIVELE 78
>gi|146341381|ref|YP_001206429.1| GTP pyrophosphokinase [Bradyrhizobium sp. ORS278]
gi|146194187|emb|CAL78208.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
ORS278]
Length = 763
Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I + N + G + V ++ E+ NI + + R + L ID + + L+ LS
Sbjct: 689 RIKVENVNEPGSLAQVATVIAEHDGNIDNISMSRRSPD---FTELTIDLEVYD--LKHLS 743
Query: 85 VNVTIRFVKQFEFNVD 100
+ K VD
Sbjct: 744 AIINQLRAKTIVAKVD 759
>gi|315049185|ref|XP_003173967.1| D-3-phosphoglycerate dehydrogenase 1 [Arthroderma gypseum CBS
118893]
gi|311341934|gb|EFR01137.1| D-3-phosphoglycerate dehydrogenase 1 [Arthroderma gypseum CBS
118893]
Length = 467
Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ + ++ ++ G++ V ILG++ ++ R +D + +
Sbjct: 392 EPNHARVIFIHNNVPGVLRKVNEILGDHNVD-KQMTDSRGDVAYLMADVSDVDSENIKDL 450
Query: 80 LEKLSVNVTIRFVKQF 95
++L + +
Sbjct: 451 YDRLEGLSSRIMTRIL 466
>gi|239944496|ref|ZP_04696433.1| acetolactate synthase 3 regulatory subunit [Streptomyces
roseosporus NRRL 15998]
gi|239990955|ref|ZP_04711619.1| acetolactate synthase 3 regulatory subunit [Streptomyces
roseosporus NRRL 11379]
gi|291447962|ref|ZP_06587352.1| acetolactate synthase small subunit [Streptomyces roseosporus
NRRL 15998]
gi|291350909|gb|EFE77813.1| acetolactate synthase small subunit [Streptomyces roseosporus
NRRL 15998]
Length = 175
Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSV 79
+ + ++ + G++ + + G NI +G ++ + + + ++G L V
Sbjct: 3 EKHTLSVLVENKPGVLARITALFSRRGFNIDSLAVGTTEHPDISRITIVVNVEGLPLEQV 62
Query: 80 LEKLSVNVTIRFVKQFE 96
++L+ V + + + E
Sbjct: 63 TKQLNKLVNVLKIVELE 79
>gi|11499308|ref|NP_070547.1| acetolactate synthase 3 regulatory subunit [Archaeoglobus
fulgidus DSM 4304]
gi|6225558|sp|O28555|ILVH_ARCFU RecName: Full=Probable acetolactate synthase small subunit;
AltName: Full=Acetohydroxy-acid synthase small subunit;
Short=AHAS; Short=ALS
gi|2648836|gb|AAB89532.1| acetolactate synthase, small subunit (ilvN) [Archaeoglobus
fulgidus DSM 4304]
Length = 159
Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ + G++ V + G NI +G ++ + + + + D ++ V++
Sbjct: 3 HTIAVLVENKPGVLARVAGLFRRRGFNIESLTVGTTERDDLSRMTIVVEGDDKVVEQVIK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + V +
Sbjct: 63 QLNKLIETIKVSEIT 77
>gi|289675166|ref|ZP_06496056.1| homoserine dehydrogenase [Pseudomonas syringae pv. syringae FF5]
gi|330895936|gb|EGH28220.1| homoserine dehydrogenase [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 434
Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKDVEEHDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + + + ++ V
Sbjct: 404 VEQRINDAIQALEALQDV 421
>gi|182435792|ref|YP_001823511.1| acetolactate synthase 3 regulatory subunit [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326776416|ref|ZP_08235681.1| acetolactate synthase, small subunit [Streptomyces cf. griseus
XylebKG-1]
gi|178464308|dbj|BAG18828.1| putative acetolactate synthase subunit small [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|326656749|gb|EGE41595.1| acetolactate synthase, small subunit [Streptomyces cf. griseus
XylebKG-1]
Length = 175
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSV 79
+ + ++ + G++ + + G NI +G ++ + + + ++G L V
Sbjct: 3 EKHTLSVLVENKPGVLARITALFSRRGFNIDSLAVGTTEHPDISRITIVVNVEGLPLEQV 62
Query: 80 LEKLSVNVTIRFVKQFE 96
++L+ V + + + E
Sbjct: 63 TKQLNKLVNVLKIVELE 79
>gi|226509280|ref|NP_001152032.1| serine/threonine-protein kinase CTR1 [Zea mays]
gi|195651985|gb|ACG45460.1| serine/threonine-protein kinase CTR1 [Zea mays]
Length = 543
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D ++ + +L E G+NI H+ S + +DG E +
Sbjct: 170 HEIIFSSIDKPKLLSRLTALLSEVGLNIQEAHVY-STKDGFCLDVFVVDGWKTEETDELI 228
Query: 84 SVNVTIR 90
+
Sbjct: 229 AAIKETL 235
>gi|330936911|gb|EGH41036.1| homoserine dehydrogenase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 434
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKDVEEHDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + + + ++ V
Sbjct: 404 VEQRINDAIQALEALQDV 421
>gi|226945990|ref|YP_002801063.1| homoserine dehydrogenase [Azotobacter vinelandii DJ]
gi|226720917|gb|ACO80088.1| homoserine dehydrogenase [Azotobacter vinelandii DJ]
Length = 439
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 5/83 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL----N 77
+ I D G++ V IL E GINI ++ + + + + + +
Sbjct: 355 SAYYLRIQAKDHPGVLAQVATILSERGINIESIMQKEAEEHDGLVPMILVTHRVRERCID 414
Query: 78 SVLEKLSVNVTIRFVKQFEFNVD 100
+ + + K V+
Sbjct: 415 EAIAAMEALEGVVG-KVVRIRVE 436
>gi|37524902|ref|NP_928246.1| GDP/GTP pyrophosphokinase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784328|emb|CAE13205.1| GTP pyrophosphokinase [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 743
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 30/90 (33%), Gaps = 5/90 (5%)
Query: 12 IQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + + + D G++ + IL +N+ + A +
Sbjct: 652 VDAVWGESYSSGYSLIVRVVANDRSGLLRDITTILANEKVNVLGVSSRSDVKQQIATIDM 711
Query: 70 CIDG---SILNSVLEKLSVNVTIRFVKQFE 96
I+ +L +L K++ + K+
Sbjct: 712 NIEIYNLQVLGRILAKINQLPDVIEAKRLH 741
>gi|330969017|gb|EGH69083.1| homoserine dehydrogenase [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 434
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKDVEEHDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + + + ++ V
Sbjct: 404 VEQRINDAIQALEALQDV 421
>gi|196232818|ref|ZP_03131668.1| amino acid-binding ACT domain protein [Chthoniobacter flavus
Ellin428]
gi|196223017|gb|EDY17537.1| amino acid-binding ACT domain protein [Chthoniobacter flavus
Ellin428]
Length = 131
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ +G ++ I N + G++ + L + INI + +L S + + + +D
Sbjct: 66 LTVGSKVLAIENNNKPGMLAKISARLAKAKINIEYAYLATSPGAKKGLLIMRVDD--TKH 123
Query: 79 VLEKLSV 85
L+ L
Sbjct: 124 ALKVLKK 130
>gi|119471911|ref|ZP_01614219.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Alteromonadales
bacterium TW-7]
gi|119445284|gb|EAW26574.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Alteromonadales
bacterium TW-7]
Length = 718
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLS 84
I +D G++ + ++L +N+ + ++ + + A+ + I D S N VL KL
Sbjct: 647 IEASDRSGLIRDISSVLANEKVNVLNMNVNTVGADQLAVFTMQIEVHDLSGTNRVLSKLH 706
Query: 85 VNVTIRFVK 93
+ K
Sbjct: 707 QIEGVHHAK 715
>gi|312194900|ref|YP_004014961.1| acetolactate synthase, small subunit [Frankia sp. EuI1c]
gi|311226236|gb|ADP79091.1| acetolactate synthase, small subunit [Frankia sp. EuI1c]
Length = 174
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ + G++ V ++ G NI +G ++ ++ + + +D L V +
Sbjct: 4 HTLSVLVENKPGVLARVASLFSRRGFNIESLAVGPTEHSDISRMTIVVAVDELPLEQVTK 63
Query: 82 KLSVNVTIRFVKQFEFNVD 100
+L+ V + K E + D
Sbjct: 64 QLNKLVNVL--KIVEMDAD 80
>gi|297192059|ref|ZP_06909457.1| homoserine dehydrogenase [Streptomyces pristinaespiralis ATCC
25486]
gi|197719491|gb|EDY63399.1| homoserine dehydrogenase [Streptomyces pristinaespiralis ATCC
25486]
Length = 430
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 30/88 (34%), Gaps = 10/88 (11%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
V ++ + D G++ V + E+G++I + + A +
Sbjct: 339 QLPVSPMGDVVTRYHISLDVADKPGVLAQVATVFAEHGVSIDT--VRQQGKDGEASLVVV 396
Query: 71 IDGSILNSV---LEKLSVNVTIRFVKQF 95
+ ++ +E L T+R V
Sbjct: 397 THRAPDAALSGTVEALRKLDTVRGVASI 424
>gi|126460253|ref|YP_001056531.1| ACT domain-containing protein [Pyrobaculum calidifontis JCM
11548]
gi|126249974|gb|ABO09065.1| ACT domain-containing protein [Pyrobaculum calidifontis JCM
11548]
Length = 217
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
+ +N D GI+ + NI E+ +NI + + + + + + + E
Sbjct: 17 GEFLVELNFDQPGILSALSNIFAEHDVNIVNIAI--DGPRRNLHFIVDLSTATEEQIREI 74
Query: 83 LSVNVTIRFVKQFEFNV 99
L FVK+ ++ V
Sbjct: 75 LKQLEMFAFVKRVKYRV 91
>gi|330950738|gb|EGH50998.1| homoserine dehydrogenase [Pseudomonas syringae Cit 7]
Length = 434
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKDVEEHDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + + + ++ V
Sbjct: 404 VEQGINDAIQALEALQDV 421
>gi|320161070|ref|YP_004174294.1| GTP pyrophosphokinase [Anaerolinea thermophila UNI-1]
gi|319994923|dbj|BAJ63694.1| GTP pyrophosphokinase [Anaerolinea thermophila UNI-1]
Length = 733
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKLSVN 86
I D G++ + +L E INI +L S L I D + L+ VL ++
Sbjct: 662 IKAYDRQGLMGDISQVLAEENINILDVNLKVSHHIATIHLTLEIGDIAQLSRVLTRIENL 721
Query: 87 VTIRFVKQFE 96
+ + +
Sbjct: 722 PNVTEAHRVK 731
>gi|322496173|emb|CBZ31244.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 407
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ V+A++ G + + I + G NI L S++ + +D + + +++S
Sbjct: 338 RLTNVHANVPGALNEINKIAVDLGCNIGMQFLSTSKAIG--YLIMDVDKDVATELRKRIS 395
Query: 85 VNVTIRF 91
Sbjct: 396 ALKYSIR 402
>gi|238901920|ref|YP_002927716.1| GTP diphosphokinase [Escherichia coli BW2952]
gi|238861387|gb|ACR63385.1| GTP diphosphokinase [Escherichia coli BW2952]
Length = 668
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 575 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 632
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 633 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 666
>gi|213865114|ref|ZP_03387233.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 727
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 634 RIVE--AVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIA 691
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 692 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 725
>gi|240168937|ref|ZP_04747596.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
kansasii ATCC 12478]
Length = 172
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILN 77
+ ++ D G++ V + G NI +G ++ + + + + + + L
Sbjct: 6 SPKTHTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATEQKDMSRMTIVVACEETPLE 65
Query: 78 SVLEKLSVNVTIRFV 92
V ++L+ + + +
Sbjct: 66 QVTKQLNKLINVIKI 80
>gi|327301445|ref|XP_003235415.1| D-3-phosphoglycerate dehydrogenase [Trichophyton rubrum CBS 118892]
gi|326462767|gb|EGD88220.1| D-3-phosphoglycerate dehydrogenase [Trichophyton rubrum CBS 118892]
Length = 472
Score = 43.5 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 8/79 (10%), Positives = 28/79 (35%), Gaps = 7/79 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSIL 76
+ + ++ ++ G++ V ILG++ ++ + A +D +
Sbjct: 397 EPNHARVIFIHNNVPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMADVSNVDSENI 452
Query: 77 NSVLEKLSVNVTIRFVKQF 95
+ ++L + +
Sbjct: 453 KDLYDQLEGLSSRIMTRIL 471
>gi|104783225|ref|YP_609723.1| homoserine dehydrogenase [Pseudomonas entomophila L48]
gi|95112212|emb|CAK16939.1| homoserine dehydrogenase [Pseudomonas entomophila L48]
Length = 450
Score = 43.5 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 3/88 (3%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 360 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEAEEQDGLVPMILLTHRV 419
Query: 75 ILNSVLEKLSVNVTIRFV--KQFEFNVD 100
+ + + + ++ V K V+
Sbjct: 420 VEQRIDDAIVALEALQDVVGKVVRIRVE 447
>gi|305665453|ref|YP_003861740.1| putative L-serine dehydratase, alpha chain [Maribacter sp.
HTCC2170]
gi|88710208|gb|EAR02440.1| probable L-serine dehydratase, alpha chain [Maribacter sp.
HTCC2170]
Length = 526
Score = 43.5 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 23/89 (25%), Gaps = 6/89 (6%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I + ++ G + + D + + + E + L +S
Sbjct: 131 GGGSFEIRNIDGFDIRINGGYYELLLSIEDNSANLEKIKALFSENSL------LFKSTQE 184
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRF 91
+ L I L KL
Sbjct: 185 NRLLVNLKFSDEISADTLNKLRGLTGFEK 213
>gi|290957372|ref|YP_003488554.1| homoserine dehydrogenase [Streptomyces scabiei 87.22]
gi|260646898|emb|CBG69995.1| homoserine dehydrogenase [Streptomyces scabiei 87.22]
Length = 433
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNV 87
D G++ V + E+G++I GR A + + S+ +E L
Sbjct: 360 DKPGVLAQVATVFSEHGVSIDTVRQQGRQDGGGEASLVVVTHRASDASLSGTVEALRNLD 419
Query: 88 TIRFVKQF 95
T+R V
Sbjct: 420 TVRGVASI 427
>gi|207858222|ref|YP_002244873.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|206710025|emb|CAR34380.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
Length = 744
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 651 RIVE--AVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|119944303|ref|YP_941983.1| (p)ppGpp synthetase I and guanosine-3',5'-bis pyrophosphate
3'-pyrophosphohydrolase [Psychromonas ingrahamii 37]
gi|119862907|gb|ABM02384.1| (p)ppGpp synthetase I and guanosine-3',5'-bis pyrophosphate
3'-pyrophosphohydrolase [Psychromonas ingrahamii 37]
Length = 737
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 18 DVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + + D G++ V +L +N+ + + T+ AI L ++
Sbjct: 655 DANSSGYSLTLRLEALDRSGLLRDVSTLLSNEKVNVLGVNSMTNVKTQTAIIDLDLEIHT 714
Query: 76 LNSVLE---KLSVNVTIRFVKQF 95
+++ + K+ + V++
Sbjct: 715 SDNIAKIQNKIKQLKDVLQVRRL 737
>gi|16761735|ref|NP_457352.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29143219|ref|NP_806561.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56414908|ref|YP_151983.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161615884|ref|YP_001589849.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167550178|ref|ZP_02343935.1| GTP diphosphokinase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|168231047|ref|ZP_02656105.1| RelA/SpoT family protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168236002|ref|ZP_02661060.1| RelA/SpoT family protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168820324|ref|ZP_02832324.1| GTP diphosphokinase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194469578|ref|ZP_03075562.1| GTP diphosphokinase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194738051|ref|YP_002115908.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197247953|ref|YP_002147866.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197363836|ref|YP_002143473.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|213163048|ref|ZP_03348758.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213424911|ref|ZP_03357661.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|238909736|ref|ZP_04653573.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|25289076|pir||AG0860 GTP pyrophosphokinase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16504036|emb|CAD06070.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29138852|gb|AAO70421.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|56129165|gb|AAV78671.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|161365248|gb|ABX69016.1| hypothetical protein SPAB_03677 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194455942|gb|EDX44781.1| GTP diphosphokinase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194713553|gb|ACF92774.1| GTP diphosphokinase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197095313|emb|CAR60870.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|197211656|gb|ACH49053.1| GTP diphosphokinase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197290736|gb|EDY30090.1| RelA/SpoT family protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|205324843|gb|EDZ12682.1| GTP diphosphokinase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205334409|gb|EDZ21173.1| RelA/SpoT family protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205342917|gb|EDZ29681.1| GTP diphosphokinase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320087381|emb|CBY97146.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|322614235|gb|EFY11167.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322620951|gb|EFY17809.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322624014|gb|EFY20848.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322628247|gb|EFY25036.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322633366|gb|EFY30108.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636057|gb|EFY32765.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322639393|gb|EFY36081.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322643745|gb|EFY40296.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322648857|gb|EFY45304.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322655150|gb|EFY51460.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658019|gb|EFY54287.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664120|gb|EFY60319.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322667089|gb|EFY63261.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322673137|gb|EFY69244.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322677872|gb|EFY73935.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322681046|gb|EFY77079.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322685643|gb|EFY81637.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323194782|gb|EFZ79969.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196533|gb|EFZ81681.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323205054|gb|EFZ90037.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323207745|gb|EFZ92691.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323212703|gb|EFZ97520.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323214814|gb|EFZ99562.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222543|gb|EGA06908.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226423|gb|EGA10631.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230698|gb|EGA14816.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323234951|gb|EGA19037.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238990|gb|EGA23040.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244652|gb|EGA28658.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323247268|gb|EGA31234.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323251800|gb|EGA35665.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323257487|gb|EGA41177.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323263272|gb|EGA46809.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323267524|gb|EGA51008.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323272713|gb|EGA56119.1| (p)ppGpp synthetase I/GTP pyrophosphokinase [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
Length = 744
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 651 RIVE--AVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|206602535|gb|EDZ39016.1| GTP pyrophosphokinase [Leptospirillum sp. Group II '5-way CG']
Length = 762
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--- 71
D+ ++ D G++ V ++ G NI H + R + A+ +
Sbjct: 672 FEVDLR-------VLMEDKPGMLAGVSAVISAKGTNITHAEV-RQDRRKMAVLNFSLMVR 723
Query: 72 DGSILNSVLEKLSVNVTIRFVKQFE 96
D + L S+++++ + V++ +
Sbjct: 724 DMTHLQSIMDEIQQFKGVIRVQRIK 748
>gi|62181466|ref|YP_217883.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|194445692|ref|YP_002042207.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|200388682|ref|ZP_03215294.1| RelA/SpoT family protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|224584747|ref|YP_002638545.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|62129099|gb|AAX66802.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|194404355|gb|ACF64577.1| GTP diphosphokinase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|199605780|gb|EDZ04325.1| RelA/SpoT family protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|224469274|gb|ACN47104.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|322715950|gb|EFZ07521.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 744
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 651 RIVE--AVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|149917050|ref|ZP_01905550.1| Homoserine dehydrogenase [Plesiocystis pacifica SIR-1]
gi|149821966|gb|EDM81359.1| Homoserine dehydrogenase [Plesiocystis pacifica SIR-1]
Length = 428
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 27/74 (36%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D +C+ +I G++ V + LG +G++I + + E + + +
Sbjct: 337 PLDALECENYLCVHVPNIPGVLGRVASCLGRHGVSIKRMNQDTPDAGEAIDMVIITERTA 396
Query: 76 LNSVLEKLSVNVTI 89
V L+
Sbjct: 397 EAKVRAALAEVDAF 410
>gi|168463893|ref|ZP_02697810.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|195633607|gb|EDX52021.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
Length = 749
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 651 RIVE--AVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|16766262|ref|NP_461877.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167993448|ref|ZP_02574542.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168261900|ref|ZP_02683873.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|197262033|ref|ZP_03162107.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|198244188|ref|YP_002216930.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205353902|ref|YP_002227703.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|16421507|gb|AAL21836.1| (p)ppGpp synthetase I [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|197240288|gb|EDY22908.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197938704|gb|ACH76037.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205273683|emb|CAR38673.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205328495|gb|EDZ15259.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205348977|gb|EDZ35608.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|261248092|emb|CBG25927.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267995092|gb|ACY89977.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301159517|emb|CBW19036.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312913978|dbj|BAJ37952.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321225636|gb|EFX50690.1| GTP pyrophosphokinase ppGpp synthetase I [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323131313|gb|ADX18743.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|326624694|gb|EGE31039.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
gi|326629014|gb|EGE35357.1| GTP pyrophosphokinase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
Length = 744
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 651 RIVE--AVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|168242717|ref|ZP_02667649.1| RelA/SpoT family protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194449513|ref|YP_002046925.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194407817|gb|ACF68036.1| GTP diphosphokinase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|205338244|gb|EDZ25008.1| RelA/SpoT family protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 744
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 651 RIVE--AVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|311693655|gb|ADP96528.1| homoserine dehydrogenase [marine bacterium HP15]
Length = 433
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN---- 77
+ I D G++ + +IL E+GINI S+ + I + + ++
Sbjct: 349 SAYYLRITALDRPGVLAKIASILSEHGINIESIMQKESELKDGRIPVIILTHTVQERQIN 408
Query: 78 SVLEKLSVNV----TIRFVKQFEFN 98
+E+L + ++ FN
Sbjct: 409 RAIEELEALSDTDGHVVRIRAENFN 433
>gi|148256036|ref|YP_001240621.1| GTP pyrophosphokinase [Bradyrhizobium sp. BTAi1]
gi|146408209|gb|ABQ36715.1| GTP pyrophosphokinase [Bradyrhizobium sp. BTAi1]
Length = 729
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I + N + G + V ++ E+ NI + + R + L ID + + L+ LS
Sbjct: 655 RIRVENVNEPGSLAQVATVIAEHDGNIDNISMSRRSPD---FTELTIDLEVYD--LKHLS 709
Query: 85 VNVTIRFVKQFEFNVD 100
+ K VD
Sbjct: 710 AIINQLRAKTIVARVD 725
>gi|150015104|ref|YP_001307358.1| acetolactate synthase, small subunit [Clostridium beijerinckii
NCIMB 8052]
gi|149901569|gb|ABR32402.1| acetolactate synthase, small subunit [Clostridium beijerinckii
NCIMB 8052]
Length = 169
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNS 78
+ + ++ ++ + G++ V + G NI +GR++ + + + D ++L
Sbjct: 1 MEKHVLSVLVKNSSGVLSRVSGLFSRRGYNIDSLTVGRTEDPSISRMTITLMGDENVLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFEFNVD 100
V ++L+ + V F D
Sbjct: 61 VKKQLNKLEDVIRV--INFKAD 80
>gi|204928152|ref|ZP_03219352.1| RelA/SpoT family protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204322474|gb|EDZ07671.1| RelA/SpoT family protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 744
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 651 RIVE--AVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|260893021|ref|YP_003239118.1| Prephenate dehydrogenase [Ammonifex degensii KC4]
gi|260865162|gb|ACX52268.1| Prephenate dehydrogenase [Ammonifex degensii KC4]
Length = 367
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 21/58 (36%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
I + D G++ + ++L E INIA + R++ E L
Sbjct: 292 PELHEIVVTVPDRPGVIAHLASLLAEKEINIADIEILRAREGEGGTIRLAFTRPEAQE 349
>gi|83815389|ref|YP_445903.1| NAD-dependent malic enzyme [Salinibacter ruber DSM 13855]
gi|83756783|gb|ABC44896.1| NAD-dependent malic enzyme [Salinibacter ruber DSM 13855]
Length = 493
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLEKLSV 85
+V ++ G++ V +++GE+G NI + R++ E I+ S+++ L
Sbjct: 39 VVISNRPGMLAKVTSVIGEHGGNIGAIDIVRAEKDELTRDITINTRSDDHAESIVQALRD 98
Query: 86 NVTIRFV 92
+ V
Sbjct: 99 LDGVEVV 105
>gi|326480122|gb|EGE04132.1| D-3-phosphoglycerate dehydrogenase [Trichophyton equinum CBS
127.97]
Length = 472
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 8/79 (10%), Positives = 28/79 (35%), Gaps = 7/79 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSIL 76
+ + ++ ++ G++ V ILG++ ++ + A +D +
Sbjct: 397 EPNHARVIFIHNNVPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMADVSNVDSENI 452
Query: 77 NSVLEKLSVNVTIRFVKQF 95
+ ++L + +
Sbjct: 453 KDLYDQLEGLSSRIMTRIL 471
>gi|326468898|gb|EGD92907.1| D-3-phosphoglycerate dehydrogenase [Trichophyton tonsurans CBS
112818]
Length = 472
Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 8/79 (10%), Positives = 28/79 (35%), Gaps = 7/79 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSIL 76
+ + ++ ++ G++ V ILG++ ++ + A +D +
Sbjct: 397 EPNHARVIFIHNNVPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMADVSNVDSENI 452
Query: 77 NSVLEKLSVNVTIRFVKQF 95
+ ++L + +
Sbjct: 453 KDLYDQLEGLSSRIMTRIL 471
>gi|161501990|ref|YP_001569102.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160863337|gb|ABX19960.1| hypothetical protein SARI_00006 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 744
Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 651 RIVE--AVWGESYSAGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 742
>gi|92117778|ref|YP_577507.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Nitrobacter hamburgensis X14]
gi|91800672|gb|ABE63047.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Nitrobacter hamburgensis X14]
Length = 769
Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEK 82
I + + + G + V ++ E+ NI + + R ++ L + D L++++ +
Sbjct: 695 RIVVDSLNEPGSLAQVATVIAEHDGNIDNISMTRRSPDFTEMTIDLEVYDLKHLSAIIAQ 754
Query: 83 LSVNVTIRFVKQFE 96
L + V++
Sbjct: 755 LRAKDVVARVERVN 768
>gi|5734568|emb|CAB52794.1| hypothetical protein [Methanothermobacter thermautotrophicus]
Length = 167
Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I + G++ + ++ INI AH ++ R + ++ S+L+++
Sbjct: 6 LSIKTVERPGVLSEITGMIASRNINITYAHLYVERDGHGSIYMELEDVEDM--ESLLDEI 63
Query: 84 SVNVTIRFVKQ 94
+ T+ V+
Sbjct: 64 RASKTVVDVRV 74
>gi|297157205|gb|ADI06917.1| homoserine dehydrogenase [Streptomyces bingchenggensis BCW-1]
Length = 430
Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 10/88 (11%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
V +I + D G++ V + E+G++I + + A +
Sbjct: 339 RLPVSPMGDVITRYHISLDVADKPGVLAQVATVFSEHGVSIDT--VRQQGKDGEASLVVV 396
Query: 71 IDGSILNSV---LEKLSVNVTIRFVKQF 95
+ ++ +E L T+R V
Sbjct: 397 THQASDAALTATVEALRRLDTVRDVASI 424
>gi|169630403|ref|YP_001704052.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
abscessus ATCC 19977]
gi|169242370|emb|CAM63398.1| Acetolactate synthase, small subunit (IlvN) [Mycobacterium
abscessus]
Length = 167
Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ D G++ V + G NIA +G ++ + + + +D L V +
Sbjct: 5 HTLSVLVEDRPGVLARVAALFSRRGFNIASLAVGPTELKDVSRMTIVVTVDDFPLEQVTK 64
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 65 QLNKLINVIKI 75
>gi|124514661|gb|EAY56173.1| GTP pyrophosphokinase [Leptospirillum rubarum]
Length = 762
Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--- 71
D+ ++ D G++ V ++ G NI H + R + A+ +
Sbjct: 672 FEVDLR-------VLMEDKPGMLAGVSAVISAKGTNITHAEV-RQDRRKMAVLNFSLMVR 723
Query: 72 DGSILNSVLEKLSVNVTIRFVKQFE 96
D + L S+++++ + V++ +
Sbjct: 724 DMTHLQSIMDEIQQFKGVIRVQRIK 748
>gi|313827420|gb|EFS65134.1| putative phosphoglycerate dehydrogenase [Propionibacterium acnes
HL063PA2]
Length = 396
Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I EI I ++ ++ G++ + ++ + G N+ + L E
Sbjct: 315 VNIPEIT-PSPRTGARIGYLHRNVPGVMATLNRLVADQGGNVTYQALAT--KGELGYCIF 371
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
I + +L ++V +
Sbjct: 372 DI-AETDSGLLANVTVLEGTIRARIL 396
>gi|302522078|ref|ZP_07274420.1| acetolactate synthase, small subunit [Streptomyces sp. SPB78]
gi|318061961|ref|ZP_07980682.1| acetolactate synthase 3 regulatory subunit [Streptomyces sp.
SA3_actG]
gi|318077435|ref|ZP_07984767.1| acetolactate synthase 3 regulatory subunit [Streptomyces sp.
SA3_actF]
gi|302430973|gb|EFL02789.1| acetolactate synthase, small subunit [Streptomyces sp. SPB78]
Length = 174
Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNS 78
+ + + ++ + G++ + ++ G NI +G ++ + + + ++ L
Sbjct: 1 MSKHTLSVLVENKPGVLARITSLFSRRGFNIDSLAVGTTEHPDISRITIVVNVEELPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 VTKQLNKLVNVLKIVELE 78
>gi|116753435|ref|YP_842553.1| acetolactate synthase, small subunit [Methanosaeta thermophila
PT]
gi|116664886|gb|ABK13913.1| acetolactate synthase, small subunit [Methanosaeta thermophila
PT]
Length = 165
Score = 43.5 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ + G++ + + G NI +G + + ++ + + D +L V++
Sbjct: 3 HTIAVIVENKPGVLTRISGLFSRRGFNIESLSVGATDNPAYSRMTISVEGDDVVLEQVVK 62
Query: 82 KLSVNVTIRFVKQF 95
+LS + + V +
Sbjct: 63 QLSKLINVIRVSRL 76
>gi|239909200|ref|YP_002955942.1| fis family transcriptional regulator [Desulfovibrio magneticus
RS-1]
gi|239799067|dbj|BAH78056.1| fis family transcriptional regulator [Desulfovibrio magneticus
RS-1]
Length = 523
Score = 43.5 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 6/75 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS----ILNSVLE 81
+ + D +G+V + +L G NI + Q A FL ID ++
Sbjct: 4 LHLKFTDRVGVVADISALLASRGHNILSMEVA--QEHGCAHVFLEIDHERGDCPRKDLMS 61
Query: 82 KLSVNVTIRFVKQFE 96
L+ + + E
Sbjct: 62 MLAACPGLLRISCIE 76
>gi|146085583|ref|XP_001465319.1| D-3-phosphoglycerate dehydrogenase [Leishmania infantum JPCM5]
gi|321398856|emb|CBZ08307.1| D-3-phosphoglycerate dehydrogenase-like protein [Leishmania
infantum JPCM5]
Length = 407
Score = 43.5 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ V+A++ G + + I + G NI L S++ + +D + + +++S
Sbjct: 338 RLTNVHANVPGALNEINKIAVDLGCNIGMQFLSTSKAIG--YLIMDVDKDVATELRKRIS 395
Query: 85 VNVTIRF 91
Sbjct: 396 ALKYSIR 402
>gi|284992533|ref|YP_003411087.1| Homoserine dehydrogenase [Geodermatophilus obscurus DSM 43160]
gi|284065778|gb|ADB76716.1| Homoserine dehydrogenase [Geodermatophilus obscurus DSM 43160]
Length = 430
Score = 43.5 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 5/79 (6%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R I + AD G++ V +G++IA + + + A + + ++
Sbjct: 347 TPTRYHISLDVADKPGVLATVAQEFARHGVSIAT--VRQDGHGDAATLVIVTHSAPDAAL 404
Query: 80 ---LEKLSVNVTIRFVKQF 95
+ L +R V
Sbjct: 405 SATVTALRGMPAVRGVTSI 423
>gi|585051|sp|P37144|DHON_METGL RecName: Full=Homoserine dehydrogenase; Short=HDH
gi|2160268|dbj|BAA40415.1| homoserine dehydrogenase [Methylobacillus glycogenes]
Length = 412
Score = 43.5 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 5/96 (5%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R + + + + + D G++ V ILG+ I+I Q E
Sbjct: 313 RLVDLPILPIGEISSAYYLRLRAVDKPGVLADVTRILGDRQISIDAMIQKEPQEGEDQAD 372
Query: 68 FLCI----DGSILNSVLEKLSVNVTIR-FVKQFEFN 98
+ + ++ + + I V +
Sbjct: 373 IIILTHVTVEKNMDDAIAAIEALPAISGKVTRLRME 408
>gi|220930246|ref|YP_002507155.1| prephenate dehydrogenase [Clostridium cellulolyticum H10]
gi|220000574|gb|ACL77175.1| Prephenate dehydrogenase [Clostridium cellulolyticum H10]
Length = 366
Score = 43.1 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSV 79
+ + D GI+ + +LG GINI + ++ S+ E + + D + +
Sbjct: 292 PKNFELIVDVTDEPGIIGRIATLLGNSGINIKNINVSNSREYEQGCLRITLSDQTNTDKA 351
Query: 80 LEKLSV 85
E L
Sbjct: 352 FEILKE 357
>gi|330807711|ref|YP_004352173.1| homoserine dehydrogenase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375819|gb|AEA67169.1| homoserine dehydrogenase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 434
Score = 43.1 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 27/91 (29%), Gaps = 8/91 (8%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESSYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEHDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVT-------IRFVKQFEFN 98
+ + + ++ + ++ N
Sbjct: 404 VEQRINDAIAALEALQGVVGPVVRIRVEHLN 434
>gi|77164804|ref|YP_343329.1| RelA/SpoT protein [Nitrosococcus oceani ATCC 19707]
gi|254434746|ref|ZP_05048254.1| RelA/SpoT family protein [Nitrosococcus oceani AFC27]
gi|76883118|gb|ABA57799.1| RelA/SpoT protein [Nitrosococcus oceani ATCC 19707]
gi|207091079|gb|EDZ68350.1| RelA/SpoT family protein [Nitrosococcus oceani AFC27]
Length = 714
Score = 43.1 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEK 82
I I D G++ + +L + NI + +++ A L I D LNS+L++
Sbjct: 638 ISIQAEDRKGLLQDITRLLAKKDTNILAINTVSDRTSGQAHMRLTIEVSDTEQLNSLLKR 697
Query: 83 LSVNVTIRFVKQFEFN 98
L+ I + FN
Sbjct: 698 LTGLPGIMNAR--RFN 711
>gi|330959147|gb|EGH59407.1| homoserine dehydrogenase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 434
Score = 43.1 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEHDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + + + ++ V
Sbjct: 404 LEQRINDAIQALEALQDV 421
>gi|242794644|ref|XP_002482417.1| D-3-phosphoglycerate dehydrogenase [Talaromyces stipitatus ATCC
10500]
gi|218719005|gb|EED18425.1| D-3-phosphoglycerate dehydrogenase [Talaromyces stipitatus ATCC
10500]
Length = 479
Score = 43.1 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + D + + ++ ++ G++ V ILG++ ++ R
Sbjct: 395 VNLRSLTID-EPDHARVIYIHQNVPGVLRKVNEILGDHNVD-KQMTDSRDDVAYLMADIS 452
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D + + KL + +
Sbjct: 453 NVDTQTIKDLYAKLESLSSRIMTRIL 478
>gi|254478185|ref|ZP_05091567.1| Homoserine dehydrogenase, NAD binding domain family
[Carboxydibrachium pacificum DSM 12653]
gi|214035914|gb|EEB76606.1| Homoserine dehydrogenase, NAD binding domain family
[Carboxydibrachium pacificum DSM 12653]
Length = 418
Score = 43.1 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
++ I + + I ++ D G++ + +LG+ GI++ + + E A L
Sbjct: 326 EVDLIPIEDTFSKYYIRLIAFDRPGVMSKITGVLGKKGISLLS-VVQKGSLGETAEIVLV 384
Query: 71 IDGSILNSVLEKLSVNVTIRFVKQFE 96
+ VLE L ++ V++ E
Sbjct: 385 THIANTGKVLEALKEIEELKEVEKIE 410
>gi|72161016|ref|YP_288673.1| acetolactate synthase 3 regulatory subunit [Thermobifida fusca
YX]
gi|71914748|gb|AAZ54650.1| acetolactate synthase, small subunit [Thermobifida fusca YX]
Length = 174
Score = 43.1 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ V ++ G NI +G ++ + + + D L V +
Sbjct: 4 HTLSVLVEDTPGVLARVASLFSRRGFNIHSLTVGPTEYEGLSRMTIVVNCDRHPLEQVTK 63
Query: 82 KLSVNVTIRFVKQFEFN 98
+L+ V + K E +
Sbjct: 64 QLNKLVNVI--KIVEMD 78
>gi|323971615|gb|EGB66846.1| ACT domain-containing protein [Escherichia coli TA007]
Length = 189
Score = 43.1 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 96 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 153
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 154 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 187
>gi|294507813|ref|YP_003571871.1| Malic oxidoreductase [Salinibacter ruber M8]
gi|294344141|emb|CBH24919.1| Malic oxidoreductase [Salinibacter ruber M8]
Length = 473
Score = 43.1 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLEKLSV 85
+V ++ G++ V +++GE+G NI + R++ E I+ S+++ L
Sbjct: 19 VVISNRPGMLAKVTSVIGEHGGNIGAIDIVRAEKDELTRDITINTRSDDHAESIVQALRD 78
Query: 86 NVTIRFV 92
+ V
Sbjct: 79 LDGVEVV 85
>gi|50954972|ref|YP_062260.1| acetolactate synthase 3 regulatory subunit [Leifsonia xyli subsp.
xyli str. CTCB07]
gi|50951454|gb|AAT89155.1| acetolactate synthase, small subunit [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 169
Score = 43.1 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCIDGSILNSVLE 81
++ ++ D G++ V + G NI +G S+ + +D L V +
Sbjct: 4 HVLSLLVEDKPGLLTRVAGLFARRGFNIHSLAVGTSEVDGLSRITVVVDVDELPLEQVTK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + + + E
Sbjct: 64 QLNKLINVIKIVELE 78
>gi|41409135|ref|NP_961971.1| acetolactate synthase 3 regulatory subunit [Mycobacterium avium
subsp. paratuberculosis K-10]
gi|118465974|ref|YP_883015.1| acetolactate synthase 3 regulatory subunit [Mycobacterium avium
104]
gi|254776272|ref|ZP_05217788.1| acetolactate synthase 3 regulatory subunit [Mycobacterium avium
subsp. avium ATCC 25291]
gi|41397955|gb|AAS05585.1| IlvN [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118167261|gb|ABK68158.1| acetolactate synthase, small subunit [Mycobacterium avium 104]
Length = 168
Score = 43.1 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
+ + ++ D G++ V + G NI +G ++ + + + + + + L
Sbjct: 1 MSPQTHTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATEQKDMSRMTIVVSAEETPL 60
Query: 77 NSVLEKLSVNVTIRFVKQFE 96
+ ++L+ + + + + E
Sbjct: 61 EQITKQLNKLINVIKIVELE 80
>gi|312962847|ref|ZP_07777334.1| homoserine dehydrogenase [Pseudomonas fluorescens WH6]
gi|311282874|gb|EFQ61468.1| homoserine dehydrogenase [Pseudomonas fluorescens WH6]
Length = 434
Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 26/91 (28%), Gaps = 8/91 (8%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEQNGQVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVT-------IRFVKQFEFN 98
+ + + + + ++ N
Sbjct: 404 LEQHINDAIEALEALQGVVGPVVRIRVEHLN 434
>gi|302502037|ref|XP_003013010.1| D-lactate dehydrogenase, putative [Arthroderma benhamiae CBS
112371]
gi|291176571|gb|EFE32370.1| D-lactate dehydrogenase, putative [Arthroderma benhamiae CBS
112371]
Length = 511
Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 26/70 (37%), Gaps = 7/70 (10%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSIL 76
+ + ++ ++ G++ V ILG++ ++ + A +D +
Sbjct: 441 EPNHARVIFIHNNVPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMADVSNVDSENI 496
Query: 77 NSVLEKLSVN 86
+ ++L
Sbjct: 497 KDLYDQLEGL 506
>gi|239982470|ref|ZP_04704994.1| acetolactate synthase 3 regulatory subunit [Streptomyces albus
J1074]
gi|291454317|ref|ZP_06593707.1| acetolactate synthase I small subunit [Streptomyces albus J1074]
gi|291357266|gb|EFE84168.1| acetolactate synthase I small subunit [Streptomyces albus J1074]
Length = 174
Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ + G++ + + G NI +G ++ + + + ++ L V +
Sbjct: 4 HTLSVLVENKPGVLARITALFSRRGFNIDSLAVGTTEHPDISRITIVVNVESLPLEQVTK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + + + E
Sbjct: 64 QLNKLVNVLKIVELE 78
>gi|226501380|ref|NP_001146158.1| hypothetical protein LOC100279727 [Zea mays]
gi|219885997|gb|ACL53373.1| unknown [Zea mays]
Length = 476
Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 28/75 (37%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D G++ + + G NI +G ++ + ILN V+E+L
Sbjct: 73 HTLSVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTDKILNQVVEQL 132
Query: 84 SVNVTIRFVKQFEFN 98
+ V + V
Sbjct: 133 NKLVNVIKVDDLSME 147
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 7/85 (8%)
Query: 14 EINFDVDIGR---LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+ D D + I+ D+ G++ V + G NI +G ++ +
Sbjct: 294 GVMTDGDPTGFCSHTLSILVNDVPGVLNLVTGVFSRRGYNIQSLAVGPAEKEGTSRITTV 353
Query: 71 I---DGSILNSVLEKLSVNVTIRFV 92
+ D SI ++ +L + + V
Sbjct: 354 VPGTDESIAK-LVHQLYKLIDVYEV 377
>gi|307596606|ref|YP_003902923.1| amino acid-binding ACT domain-containing protein [Vulcanisaeta
distributa DSM 14429]
gi|307551807|gb|ADN51872.1| amino acid-binding ACT domain protein [Vulcanisaeta distributa
DSM 14429]
Length = 199
Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 29/74 (39%), Gaps = 6/74 (8%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
++ ++ D G++ + ++ +NI R+ + + +DG + N +L +
Sbjct: 3 WLLVSISRDRPGLLNDITGVIRSRNLNI------RNIVGNNYAILIEVDGEVNNELLNNV 56
Query: 84 SVNVTIRFVKQFEF 97
S + V
Sbjct: 57 SNVDGVNTVNMVNL 70
>gi|307625647|gb|ADN69951.1| GDP/GTP pyrophosphokinase [Escherichia coli UM146]
Length = 744
Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 651 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 709 TIDMTIEIYNLQVLGRVLGKLNQVPDVIGARRLH 742
>gi|42523075|ref|NP_968455.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus HD100]
gi|39575280|emb|CAE79448.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus HD100]
Length = 738
Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 21/96 (21%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+G+ R ++++ I++ D+ G++ + + GINI + R+
Sbjct: 656 GEGQERIVRLK--------------IISQDVPGLLKLMSEAFAQQGINIQSAQI-RTTKD 700
Query: 63 EHAISFLCID----GSILNSV--LEKLSVNVTIRFV 92
+ A+ + + +V ++K+ + + V
Sbjct: 701 KKAVCNFEVSVQNASQLNQAVFEIQKIKGIIGVTRV 736
>gi|160872046|ref|ZP_02062178.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Rickettsiella
grylli]
gi|159120845|gb|EDP46183.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Rickettsiella
grylli]
Length = 736
Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI---LNSVLEK 82
IC+ + G++ V ++ +N+ L + A L I+ L+ VL++
Sbjct: 661 ICVEAYNRPGLLRDVSTLIANEKLNLIALTLASDKPDPKASIKLTIEIPNLLSLSKVLDR 720
Query: 83 LSVNVTIRFVK 93
+ + V+
Sbjct: 721 IKQVPNVIDVR 731
>gi|15679440|ref|NP_276557.1| acetolactate synthase 3 regulatory subunit [Methanothermobacter
thermautotrophicus str. Delta H]
gi|6225559|sp|O27492|ILVH_METTH RecName: Full=Probable acetolactate synthase small subunit;
AltName: Full=Acetohydroxy-acid synthase small subunit;
Short=AHAS; Short=ALS
gi|2622555|gb|AAB85918.1| acetolactate synthase, small subunit [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 168
Score = 43.1 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGS 74
+++ +I + G++ V + G NI + +G S++ A + D
Sbjct: 2 IEMEPDTHIISALVEHKPGVLQRVAGLFTRRGFNIENITVGESETPGIARMTIIARGDDR 61
Query: 75 ILNSVLEKLSVNVTIRFVKQFE 96
+L + ++L+ + + V+ E
Sbjct: 62 VLEQITKQLNKLIDVIKVRDLE 83
>gi|115374167|ref|ZP_01461454.1| RelA/SpoT family protein [Stigmatella aurantiaca DW4/3-1]
gi|310820896|ref|YP_003953254.1| GTP pyrophosphokinase [Stigmatella aurantiaca DW4/3-1]
gi|115368834|gb|EAU67782.1| RelA/SpoT family protein [Stigmatella aurantiaca DW4/3-1]
gi|309393968|gb|ADO71427.1| GTP pyrophosphokinase [Stigmatella aurantiaca DW4/3-1]
Length = 734
Score = 43.1 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 18 DVDIGRLM---ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--- 71
D+ + I++AD G++ + N + G+NI+ + R+ + A++ +
Sbjct: 652 DIRGEYKRPVTLRILSADRPGMLSDITNTFSKKGVNISQANC-RATGDDRAVNTFEVTIS 710
Query: 72 DGSILNSVLEKLSVNVTIRFVKQF 95
D L ++ + ++ V++
Sbjct: 711 DLKQLTELMRSIERIQGVQSVERI 734
>gi|78044296|ref|YP_360593.1| mgtC family protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77996411|gb|ABB15310.1| mgtC family protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 219
Score = 43.1 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL--GRSQSTEHAISFLCIDGS 74
++ + ++ D G + V G YG+NI + + ++Q + I D +
Sbjct: 139 LEIYRSGETVTVLVEDTPGQLAKVSEAFGRYGLNIDNVEIIKKKNQKVQIVIMLSRPDKN 198
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ +E+++ + V
Sbjct: 199 RVYKAIEEIANLPGVIQV 216
>gi|145224817|ref|YP_001135495.1| acetolactate synthase 3 regulatory subunit [Mycobacterium gilvum
PYR-GCK]
gi|315445147|ref|YP_004078026.1| acetolactate synthase, small subunit [Mycobacterium sp. Spyr1]
gi|145217303|gb|ABP46707.1| acetolactate synthase, small subunit [Mycobacterium gilvum
PYR-GCK]
gi|315263450|gb|ADU00192.1| acetolactate synthase, small subunit [Mycobacterium sp. Spyr1]
Length = 166
Score = 43.1 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
+ ++ D G++ V ++ G NI +G ++ + + + +D + +
Sbjct: 5 HTLSVLVEDKPGVLARVASLFSRRGYNIQSLAVGATEHKDLSRMTIVVDVEESPLEQITK 64
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 65 QLNKLINVIKI 75
>gi|121712550|ref|XP_001273886.1| D-3-phosphoglycerate dehydrogenase [Aspergillus clavatus NRRL 1]
gi|119402039|gb|EAW12460.1| D-3-phosphoglycerate dehydrogenase [Aspergillus clavatus NRRL 1]
Length = 474
Score = 43.1 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ + ++ ++ G++ V ILG++ ++ R +D S + +
Sbjct: 399 EPNHARVIYIHQNVPGVLRKVNEILGDHNVD-KQMTDSRDDVAYLMADISDVDNSTIKDL 457
Query: 80 LEKLSVNVTIRFVKQF 95
E+L + +
Sbjct: 458 YERLESLSSRVMTRIL 473
>gi|326381540|ref|ZP_08203234.1| acetolactate synthase 3 regulatory subunit [Gordonia
neofelifaecis NRRL B-59395]
gi|326199787|gb|EGD56967.1| acetolactate synthase 3 regulatory subunit [Gordonia
neofelifaecis NRRL B-59395]
Length = 166
Score = 43.1 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLE 81
+ ++ D G++ V + G NI +G ++ + + +D L V +
Sbjct: 4 HTLSVLVEDRPGVLARVSGLFSRRGFNIESLAVGPTELKGISRMTIMVSVDDFPLEQVTK 63
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 64 QLNKLVNVIKI 74
>gi|239908231|ref|YP_002954972.1| GTP pyrophosphokinase [Desulfovibrio magneticus RS-1]
gi|239798097|dbj|BAH77086.1| GTP pyrophosphokinase [Desulfovibrio magneticus RS-1]
Length = 740
Score = 43.1 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEKL 83
+ I+ + G++ + NIL + G+NI + + A+ F + + D S L +E+L
Sbjct: 649 LSILAKNQKGVLGKISNILADEGVNIDSGAIHSNVDGTTALVFRIEVRDASHLYRTIERL 708
Query: 84 SVNVTIRFVK 93
++ VK
Sbjct: 709 RKLDSVIDVK 718
>gi|149923136|ref|ZP_01911550.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Plesiocystis pacifica SIR-1]
gi|149815974|gb|EDM75489.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Plesiocystis pacifica SIR-1]
Length = 741
Score = 43.1 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 35/107 (32%), Gaps = 19/107 (17%)
Query: 1 VFSDGKP-RFIKIQ-------EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIA 52
V + +P R I+I + + D G++ + +++ GIN+
Sbjct: 640 VTHNQEPERLIEIDWGRKVRHRYPVKLSLEV-------LDQPGVLRDIADLVSNMGINMR 692
Query: 53 HFHLGR-SQSTEHAISFLCIDGSILNSVLEKLSVNVT---IRFVKQF 95
H R + L ++ V++ L + ++
Sbjct: 693 ATHSSRSRKRPGTQTITLELEVDRAEQVVQALGRLEGLPVVISARRV 739
>gi|313122730|ref|YP_004044657.1| L-threonine ammonia-lyase [Halogeometricum borinquense DSM 11551]
gi|312296212|gb|ADQ69301.1| L-threonine ammonia-lyase [Halogeometricum borinquense DSM 11551]
Length = 412
Score = 43.1 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 31/97 (31%), Gaps = 9/97 (9%)
Query: 4 DGKPRFIKIQEINFDVDIGRL---MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G +Q++ + R + + D G++ + +I+G + NI RS+
Sbjct: 305 GGNIDIATLQDMLTRALVDRHQFVTLYVRIDDRPGVLGEIADIIGRHDTNIRSVRHDRSE 364
Query: 61 ST---EHAISFLCIDGSILNS---VLEKLSVNVTIRF 91
A + + VL ++
Sbjct: 365 EGLPVGKADLVIRTTTPGEAAMGRVLSEIEAAGYTIK 401
>gi|162452118|ref|YP_001614485.1| GTP diphosphokinase [Sorangium cellulosum 'So ce 56']
gi|50403843|gb|AAT76675.1| pp(p)Gpp synthetase/hydrolase [Sorangium cellulosum]
gi|161162700|emb|CAN94005.1| GTP diphosphokinase [Sorangium cellulosum 'So ce 56']
Length = 724
Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
+ GI+ VG+ E GINI A G + +FLC D + L SV+ +L +
Sbjct: 659 NRPGILATVGHTFHEQGINISEATCRAGDDGRAMNTFTFLCSDLAQLKSVIRRLQRIPGV 718
Query: 90 RFV 92
V
Sbjct: 719 MAV 721
>gi|326204339|ref|ZP_08194198.1| Prephenate dehydrogenase [Clostridium papyrosolvens DSM 2782]
gi|325985614|gb|EGD46451.1| Prephenate dehydrogenase [Clostridium papyrosolvens DSM 2782]
Length = 366
Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSV 79
+ + D GI+ + +LG GINI + ++ S+ E + + D + +
Sbjct: 292 PKNFELIVDVTDEPGIIGKIATLLGNSGINIKNINVSNSREYEQGCLKITLSDQANTDKA 351
Query: 80 LEKLSV 85
E L
Sbjct: 352 YEILEA 357
>gi|302536937|ref|ZP_07289279.1| homoserine dehydrogenase [Streptomyces sp. C]
gi|302445832|gb|EFL17648.1| homoserine dehydrogenase [Streptomyces sp. C]
Length = 430
Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 10/88 (11%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
V ++ + D G++ V E+G++I + + A +
Sbjct: 339 QLPVSPMGDVVTRYHISLDVADKPGVLAQVATTFAEHGVSIDT--VRQQGKDGEASLVVV 396
Query: 71 IDGSILNSV---LEKLSVNVTIRFVKQF 95
+ ++ +E L T+R V
Sbjct: 397 THRAPDAALSGTVEALRKLDTVRGVASI 424
>gi|311898489|dbj|BAJ30897.1| putative acetolactate synthase small subunit [Kitasatospora setae
KM-6054]
Length = 177
Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILN 77
+ + + ++ + G++ + ++ G NI +G ++ + + + ++ L
Sbjct: 3 TMSKHTLSVLVENKPGVLARIASLFSRRGFNIDSLAVGPTEHPDISRMTIVVNVEELPLE 62
Query: 78 SVLEKLSVNVTIRFV 92
V ++L+ V + +
Sbjct: 63 QVTKQLNKLVNVIKI 77
>gi|284032771|ref|YP_003382702.1| acetolactate synthase small subunit [Kribbella flavida DSM 17836]
gi|283812064|gb|ADB33903.1| acetolactate synthase, small subunit [Kribbella flavida DSM
17836]
Length = 244
Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNS 78
+ + + I+ + G++ V ++ G NI +G ++ E + + +D L
Sbjct: 1 MSKHTLSILVENKHGVLARVAALISRRGFNIDSLAVGPTEHPEISRMTIAVSVDEQPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
+ ++L+ V + + + E
Sbjct: 61 ITKQLNKLVNVIKIVELE 78
>gi|330504629|ref|YP_004381498.1| homoserine dehydrogenase [Pseudomonas mendocina NK-01]
gi|328918915|gb|AEB59746.1| homoserine dehydrogenase [Pseudomonas mendocina NK-01]
Length = 434
Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 1/68 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGSILNSVL 80
+ I D G++ V +IL E GINI + L + ++
Sbjct: 350 SAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEAEEQDGLVPMILVTHRVVEARII 409
Query: 81 EKLSVNVT 88
E ++
Sbjct: 410 EAIAAMEA 417
>gi|257084090|ref|ZP_05578451.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|256992120|gb|EEU79422.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
Length = 219
Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 3 SDGKPRF--IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G I++ N + ++ ++N D + + L + NI + R
Sbjct: 128 GGGTIEVKYIELDGFNVQLHGPLPILLVINQDEQAMQA-FKDTLQKN--NIQVNAVSRYV 184
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ +D + ++SV E+L +
Sbjct: 185 EGNQILFIFDLDSAPISSVKEQLFSLDDTSKIILL 219
>gi|289613287|emb|CBI59881.1| unnamed protein product [Sordaria macrospora]
Length = 466
Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 30/91 (32%), Gaps = 9/91 (9%)
Query: 10 IKIQEINFDV----DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ + E+ + + ++ ++ G++ V IL E+ ++ + A
Sbjct: 377 VNVPEVTMRSLTLDEPNHARVIYIHRNVPGVLRKVNEILAEHNVD----KQISDSKGDIA 432
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ + ++ + N+ +
Sbjct: 433 YLMADV-SEVKQDDIKNIRDNLDSLSSRILT 462
>gi|20808965|ref|NP_624136.1| homoserine dehydrogenase [Thermoanaerobacter tengcongensis MB4]
gi|20517630|gb|AAM25740.1| Homoserine dehydrogenase [Thermoanaerobacter tengcongensis MB4]
Length = 418
Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
++ I + + I ++ D G++ + +LG GI++ + + E A L
Sbjct: 326 EVDLIPIEDTFSKYYIRLIAFDRPGVMSKITGVLGNKGISLLS-VVQKGSLGETAEIVLV 384
Query: 71 IDGSILNSVLEKLSVNVTIRFVKQFE 96
+ VLE L ++ V++ E
Sbjct: 385 THIANTGKVLEALKEIEELKEVEKIE 410
>gi|322487894|emb|CBZ23138.1| D-3-phosphoglycerate dehydrogenase-like protein [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 407
Score = 42.7 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ V+ ++ G + + I + G NI L S++ + +D + + +++S
Sbjct: 338 RLTNVHVNVPGALNEINKIAVDLGCNIGMQFLSTSKAIG--YLIMDVDKDVAVELRKRIS 395
Query: 85 VNVTIRF 91
Sbjct: 396 ALKYSIR 402
>gi|228477029|ref|ZP_04061667.1| phosphoglycerate dehydrogenase [Streptococcus salivarius SK126]
gi|228251048|gb|EEK10219.1| phosphoglycerate dehydrogenase [Streptococcus salivarius SK126]
Length = 393
Score = 42.7 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NS 78
I ++N ++ IV + + ++ I ++ ++A + L +D + +
Sbjct: 315 APYRITLINKNVPNIVARISTAVSDFNI--NIDNIINRSKGDYAYTLLDLDETDKSKIDE 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++ K + I V+ +
Sbjct: 373 LVAKFEASDNIVRVRLIK 390
>gi|327462083|gb|EGF08412.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
sanguinis SK1057]
Length = 391
Score = 42.7 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I ++N ++ IV + + + I ++ +
Sbjct: 298 GEIINSVNFPNVR-QALSAPYRITLINKNVPNIVARISTAVSDLNI--NIDNIINRSKGD 354
Query: 64 HAISFLCIDGSIL---NSVLEKLSVNVTIRFVKQFE 96
+A + L +D S +++K + I V+ +
Sbjct: 355 YAYTLLDLDESDESKIQELVDKFEKSDNIVRVRLIK 390
>gi|149377065|ref|ZP_01894815.1| homoserine dehydrogenase [Marinobacter algicola DG893]
gi|149358601|gb|EDM47073.1| homoserine dehydrogenase [Marinobacter algicola DG893]
Length = 433
Score = 42.7 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN---- 77
+ I D G++ V +IL E+GINI S+ + I + + ++
Sbjct: 349 SAYYLRIQALDRPGVLAKVASILSEHGINIESIMQKESELKDGRIPVIILTHTVQERQIN 408
Query: 78 SVLEKLSVN----VTIRFVKQFEFN 98
+E+L + ++ FN
Sbjct: 409 RAIEELEALSDIDEKVVRIRAENFN 433
>gi|294670863|ref|ZP_06735719.1| hypothetical protein NEIELOOT_02567 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307350|gb|EFE48593.1| hypothetical protein NEIELOOT_02567 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 312
Score = 42.7 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 27/77 (35%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + + D G++ + N+L + ++I + + A + ++
Sbjct: 222 PMDEIVSSYYLRVQAQDKPGVLGRIANLLADQNVSIEALIQKGVVNGDTAEIVILTHSTV 281
Query: 76 LNSVLEKLSVNVTIRFV 92
V ++ + V
Sbjct: 282 EKHVKAAIAGIEGMDTV 298
>gi|319948230|ref|ZP_08022386.1| acetolactate synthase 3 regulatory subunit [Dietzia cinnamea P4]
gi|319438105|gb|EFV93069.1| acetolactate synthase 3 regulatory subunit [Dietzia cinnamea P4]
Length = 168
Score = 42.7 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ D G++ V ++ G NI +G +++ + + ++ L V +
Sbjct: 6 HTLSVLVEDKPGVLARVASLFSRRGFNIESLAVGPTETDGLSRMTIVVNVEDFPLEQVTK 65
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 66 QLNKLVNVIKI 76
>gi|153004740|ref|YP_001379065.1| acetolactate synthase, small subunit [Anaeromyxobacter sp.
Fw109-5]
gi|152028313|gb|ABS26081.1| acetolactate synthase, small subunit [Anaeromyxobacter sp.
Fw109-5]
Length = 177
Score = 42.7 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILN 77
+ I ++ + G++ + + G NIA +G ++ E++ + + +
Sbjct: 9 NGSTHTISLLVENKPGVLHRIAGLFSRRGYNIASLTVGPTERQEYSRMTIVVRLGSKTVE 68
Query: 78 SVLEKLSVNVTIRFVKQFE 96
V+ ++ V + V++
Sbjct: 69 QVVRQVQKLVPVVEVRELS 87
>gi|320588939|gb|EFX01407.1| d-3-phosphoglycerate dehydrogenase [Grosmannia clavigera kw1407]
Length = 482
Score = 42.7 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
Query: 10 IKIQEINFDV----DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ + E+N + + V+ ++ G++ V ILG + ++ + A
Sbjct: 393 VNLPEVNMRSLTLDEPNHARVIYVHRNVPGVLRRVNEILGNHNVD----KQITDSKGDTA 448
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
I + S L++++ N+ +
Sbjct: 449 YLMADI-SDVKPSDLKEITDNLEALSSRILT 478
>gi|163845763|ref|YP_001633807.1| acetolactate synthase small subunit [Chloroflexus aurantiacus
J-10-fl]
gi|163667052|gb|ABY33418.1| acetolactate synthase, small subunit [Chloroflexus aurantiacus
J-10-fl]
Length = 179
Score = 42.7 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 30/69 (43%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D G++ V ++ G NI +G S++ + L ++ + V+++L
Sbjct: 4 HTIVALVQDRPGVLSRVTGLVRRRGYNIESLAVGHSETPGVSRLTLVVESEDVEQVVKQL 63
Query: 84 SVNVTIRFV 92
+ + V
Sbjct: 64 YRLIEVIKV 72
>gi|148272990|ref|YP_001222551.1| GTP pyrophosphokinase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830920|emb|CAN01864.1| GTP pyrophosphokinase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 749
Score = 42.7 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 7/85 (8%)
Query: 15 INFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQST-EHAISF 68
I + + +V+ D G++ V +L E+ +NI + S + +
Sbjct: 659 IEVEWAPSSKSLFLVHIQVEALDRSGLLSDVTRVLSEHHVNILSASVSTSSNRLAISRFV 718
Query: 69 LCI-DGSILNSVLEKLSVNVTIRFV 92
+ D + L+ VL + + V
Sbjct: 719 FEMGDVTHLDRVLNAVRRIDAVYDV 743
>gi|329939820|ref|ZP_08289121.1| homoserine dehydrogenase [Streptomyces griseoaurantiacus M045]
gi|329301390|gb|EGG45285.1| homoserine dehydrogenase [Streptomyces griseoaurantiacus M045]
Length = 433
Score = 42.7 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 9/89 (10%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
V ++ + D G++ V + E+G++I + S +
Sbjct: 339 RLPVSPMGEVVTRYHISLDVADKPGVLAQVATVFAEHGVSIDTVRQQSRPDGDGEASLVV 398
Query: 71 IDGSILNS----VLEKLSVNVTIRFVKQF 95
+ ++ V+E L T+R V
Sbjct: 399 VTHRASDAALTGVVEALRSLDTVRGVASI 427
>gi|328543518|ref|YP_004303627.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (PpGpp
synthetase I) ((P)ppGpp synthetase) [Polymorphum gilvum
SL003B-26A1]
gi|326413262|gb|ADZ70325.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (PpGpp
synthetase I) ((P)ppGpp synthetase) [Polymorphum gilvum
SL003B-26A1]
Length = 735
Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Query: 2 FSDGKPRFIKIQ-EINFDVDIGRL--MICIVNADILGIVVFVGNILGEYGINIAHFHLGR 58
F D R+I ++ +I+ D + R I + + G + + I+G+ G NI + + R
Sbjct: 636 FDDQSERWIDVRWDIDID-NPERFPARISVSALNEPGSLATIAQIIGDNGGNIDNLKMVR 694
Query: 59 SQSTEHAISF-LCI-DGSILNSVLEKLSVNVTIRFVKQFE 96
+ H + L + D LN ++ +L + V +
Sbjct: 695 TAPDFHQMLIDLEVWDLKHLNRIINQLRAKPNVSNVSRVN 734
>gi|302668106|ref|XP_003025630.1| D-lactate dehydrogenase, putative [Trichophyton verrucosum HKI
0517]
gi|291189747|gb|EFE45019.1| D-lactate dehydrogenase, putative [Trichophyton verrucosum HKI
0517]
Length = 510
Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 26/70 (37%), Gaps = 7/70 (10%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSIL 76
+ + ++ ++ G++ V ILG++ ++ + A +D +
Sbjct: 440 EPNHARVIFIHNNVPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMADVSNVDSENI 495
Query: 77 NSVLEKLSVN 86
+ ++L
Sbjct: 496 KDLYDQLEGL 505
>gi|296140557|ref|YP_003647800.1| acetolactate synthase, small subunit [Tsukamurella paurometabola
DSM 20162]
gi|296028691|gb|ADG79461.1| acetolactate synthase, small subunit [Tsukamurella paurometabola
DSM 20162]
Length = 167
Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ D G++ V ++ G NI +G ++ + + +D L V +
Sbjct: 5 HTLSVLVEDRPGVLARVSSLFSRRGFNIESLAVGGTELKGVSRMTIVVTVDELPLEQVTK 64
Query: 82 KLSVNVTIRFV 92
+L+ V++ +
Sbjct: 65 QLNKLVSVLKI 75
>gi|170781154|ref|YP_001709486.1| GTP pyrophosphokinase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155722|emb|CAQ00843.1| GTP pyrophosphokinase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 749
Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 7/85 (8%)
Query: 15 INFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQST-EHAISF 68
I + + +V+ D G++ V +L E+ +NI + S + +
Sbjct: 659 IEVEWAPSSKSLFLVHIQVEALDRSGLLSDVTRVLSEHHVNILSASVSTSSNRLAISRFV 718
Query: 69 LCI-DGSILNSVLEKLSVNVTIRFV 92
+ D + L+ VL + + V
Sbjct: 719 FEMGDVTHLDRVLNAVRRIDAVYDV 743
>gi|324991371|gb|EGC23304.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
sanguinis SK353]
Length = 391
Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I ++N ++ IV + + + I ++ +
Sbjct: 298 GEIINSVNFPNVR-QALSAPYRITLINKNVPNIVARISTAVSDLNI--NIDNIINRSKGD 354
Query: 64 HAISFLCIDGSIL---NSVLEKLSVNVTIRFVKQFE 96
+A + L +D S +++K + I V+ +
Sbjct: 355 YAYTLLDLDESDESKIQELVDKFENSDNIVRVRLIK 390
>gi|57640561|ref|YP_183039.1| hypothetical protein TK0626 [Thermococcus kodakarensis KOD1]
gi|57158885|dbj|BAD84815.1| predicted regulator of amino acid metabolism, containing ACT domain
[Thermococcus kodakarensis KOD1]
Length = 135
Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL-SVNVTI 89
D G++ + + G++GINI A +D S LE+L + +
Sbjct: 64 EDRPGVLAKISGLFGKHGINILFNESEELSELGLAAIVAIVDVSGSRISLEELKRALMGL 123
Query: 90 RFVKQFEF 97
+ VK+
Sbjct: 124 KEVKELTL 131
>gi|163782152|ref|ZP_02177151.1| acetolactate synthase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882684|gb|EDP76189.1| acetolactate synthase [Hydrogenivirga sp. 128-5-R1-1]
Length = 193
Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I + + +G++ + ++ G NI +G + + + + D +++ V++
Sbjct: 29 HVINVKVRNEIGVLARIATLIAGKGYNIESLSVGETHEPGISRMTIEVVGDDIVIDQVVK 88
Query: 82 KLSVNVTIRFVKQFE 96
+L + V+
Sbjct: 89 QLRKLIDTLKVRDIT 103
>gi|146308413|ref|YP_001188878.1| homoserine dehydrogenase [Pseudomonas mendocina ymp]
gi|145576614|gb|ABP86146.1| homoserine dehydrogenase [Pseudomonas mendocina ymp]
Length = 434
Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGSILNSVL 80
+ I D G++ V +IL E GINI + L + +L
Sbjct: 350 SAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEAEEQDGLVPMILVTHRVVEARIL 409
Query: 81 EKLSVNV 87
+ +S
Sbjct: 410 DAISAME 416
>gi|297617904|ref|YP_003703063.1| prephenate dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
gi|297145741|gb|ADI02498.1| Prephenate dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
Length = 360
Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 28/72 (38%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
I V D G++ ++G +LGE GINI + R + + L +
Sbjct: 285 ALPSACEIITVVLDRPGVIGYLGTVLGEGGINIVDIEILRVREGDGGTIRLGVPSVEDGE 344
Query: 79 VLEKLSVNVTIR 90
KL + I+
Sbjct: 345 KAVKLLRDQGIK 356
>gi|320449800|ref|YP_004201896.1| prephenate dehydrogenase [Thermus scotoductus SA-01]
gi|320149969|gb|ADW21347.1| prephenate dehydrogenase [Thermus scotoductus SA-01]
Length = 359
Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL 56
+ + D G + + LGE G+NI +
Sbjct: 289 PEMHDLVVQVPDRPGQIARIATALGEAGVNIKDIEV 324
>gi|312278843|gb|ADQ63500.1| D-3-phosphoglycerate dehydrogenase, putative [Streptococcus
thermophilus ND03]
Length = 392
Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NS 78
I ++N ++ IV + + ++ I ++ E+A + L +D + +
Sbjct: 315 APYRITLINKNVPNIVARISTAVSDFNI--NIDNIINRSKGEYAYTLLDLDETDKSKIDE 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++ K + I V+ +
Sbjct: 373 LVAKFEASDNIVRVRLIK 390
>gi|327401300|ref|YP_004342139.1| acetolactate synthase small subunit [Archaeoglobus veneficus
SNP6]
gi|327316808|gb|AEA47424.1| acetolactate synthase, small subunit [Archaeoglobus veneficus
SNP6]
Length = 164
Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSV 79
+ I ++ + G++ V ++ G NI +G ++ + + + + D + V
Sbjct: 3 EKHTIAVLVENKPGVLARVASLFRRRGFNIDSLAVGTTEREDISRMTIVVKGDDRTVEQV 62
Query: 80 LEKLSVNVTIRFVKQFE 96
+++L+ + + V
Sbjct: 63 MKQLNKLIEVIKVSDLT 79
>gi|322373426|ref|ZP_08047962.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Streptococcus sp. C150]
gi|321278468|gb|EFX55537.1| D-isomer specific 2-hydroxyacid dehydrogenase family protein
[Streptococcus sp. C150]
Length = 392
Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NS 78
I ++N ++ IV + + ++ I ++ E+A + L +D + +
Sbjct: 315 APYRITLINKNVPNIVARISTAVSDFNI--NIDNIINRSKGEYAYTLLDLDETDKSKIDE 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++ K + I V+ +
Sbjct: 373 LVAKFEASDNIVRVRLIK 390
>gi|242067901|ref|XP_002449227.1| hypothetical protein SORBIDRAFT_05g006620 [Sorghum bicolor]
gi|241935070|gb|EES08215.1| hypothetical protein SORBIDRAFT_05g006620 [Sorghum bicolor]
Length = 476
Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 28/75 (37%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D G++ + + G NI +G ++ + ILN V+E+L
Sbjct: 74 HTLSVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTDKILNQVVEQL 133
Query: 84 SVNVTIRFVKQFEFN 98
+ V + V
Sbjct: 134 NKLVNVIKVDDLSME 148
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 7/85 (8%)
Query: 14 EINFDVDIGR---LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+ D D + I+ D+ G++ V + G NI +G + +
Sbjct: 294 GVMTDGDPTGFCSHTLSILVNDVPGVLNVVTGVFSRRGYNIQSLAVGPAAKEGTSRITTV 353
Query: 71 I---DGSILNSVLEKLSVNVTIRFV 92
+ D SI ++ +L + + V
Sbjct: 354 VPGNDESIAK-LVHQLYKLIDVHEV 377
>gi|326330696|ref|ZP_08197000.1| acetolactate synthase, small subunit [Nocardioidaceae bacterium
Broad-1]
gi|325951537|gb|EGD43573.1| acetolactate synthase, small subunit [Nocardioidaceae bacterium
Broad-1]
Length = 187
Score = 42.7 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILN 77
G+ + ++ + G++ V + G NI +G ++ E + + ++ + L
Sbjct: 8 TGGKHTLSVLVENKPGVLARVAALFSRRGFNIESLAVGPTEHDEVSRMTVVVNLENTPLE 67
Query: 78 SVLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 68 QVTKQLNKLVEVIKIVELE 86
>gi|150005091|ref|YP_001299835.1| acetohydroxyacid synthase small subunit [Bacteroides vulgatus
ATCC 8482]
gi|254883225|ref|ZP_05255935.1| acetohydroxyacid synthase small subunit [Bacteroides sp.
4_3_47FAA]
gi|294778899|ref|ZP_06744315.1| acetolactate synthase, small subunit [Bacteroides vulgatus PC510]
gi|319642600|ref|ZP_07997246.1| acetohydroxyacid synthase small subunit [Bacteroides sp. 3_1_40A]
gi|149933515|gb|ABR40213.1| acetohydroxyacid synthase small subunit [Bacteroides vulgatus
ATCC 8482]
gi|254836018|gb|EET16327.1| acetohydroxyacid synthase small subunit [Bacteroides sp.
4_3_47FAA]
gi|294447208|gb|EFG15792.1| acetolactate synthase, small subunit [Bacteroides vulgatus PC510]
gi|317385688|gb|EFV66621.1| acetohydroxyacid synthase small subunit [Bacteroides sp. 3_1_40A]
Length = 184
Score = 42.7 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ + + +I G++ + + INI ++ S + + ++ V++
Sbjct: 6 YTLIVHSENIAGLLNQITAVFTRRQINIESLNVSASSIKGVHKYTITVWTTQDVIEKVVK 65
Query: 82 KLSVNVTIRFVKQFE 96
++ + + F
Sbjct: 66 QIEKKIDVLQAHYFT 80
>gi|154509108|ref|ZP_02044750.1| hypothetical protein ACTODO_01625 [Actinomyces odontolyticus ATCC
17982]
gi|293192158|ref|ZP_06609370.1| acetolactate synthase, small subunit [Actinomyces odontolyticus
F0309]
gi|153798742|gb|EDN81162.1| hypothetical protein ACTODO_01625 [Actinomyces odontolyticus ATCC
17982]
gi|292820354|gb|EFF79346.1| acetolactate synthase, small subunit [Actinomyces odontolyticus
F0309]
Length = 170
Score = 42.7 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSV 79
R + ++ + G++ V + NI +G ++ E + + D + + V
Sbjct: 3 NRHTLAVLVENKPGVLTRVAALFARRAFNIKSLTVGETEHPEISRMTIIVDADSAPIEQV 62
Query: 80 LEKLSVNVTIRFVKQFE 96
+++L+ + + V + E
Sbjct: 63 VKQLNKLINVLKVVELE 79
>gi|325262453|ref|ZP_08129190.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Clostridium sp. D5]
gi|324032285|gb|EGB93563.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Clostridium sp. D5]
Length = 529
Score = 42.3 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 28/92 (30%), Gaps = 3/92 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G I+I + + D V + G GI F + S +
Sbjct: 132 GGGAIEIIEIDGFPIMIKGDFNAAFL-YLDETAEYSVVED--GVKGIAELEFRMKESTAG 188
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
+ + ++ + L+K+ + V+
Sbjct: 189 GKRMLYFETREALREAQLQKMLELPGVVNVRY 220
>gi|323351078|ref|ZP_08086735.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
sanguinis VMC66]
gi|322122802|gb|EFX94511.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
sanguinis VMC66]
Length = 391
Score = 42.3 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I ++N ++ IV + + + I ++ +
Sbjct: 298 GEIINSVNFPNVR-QALSAPYRITLINKNVPNIVARISTAVSDLNI--NIDNIINRSKGD 354
Query: 64 HAISFLCIDGSIL---NSVLEKLSVNVTIRFVKQFE 96
+A + L +D S +++K + I V+ +
Sbjct: 355 YAYTLLDLDESDESKIQELVDKFENSDNIVRVRLIK 390
>gi|289704783|ref|ZP_06501204.1| acetolactate synthase, small subunit [Micrococcus luteus SK58]
gi|289558499|gb|EFD51769.1| acetolactate synthase, small subunit [Micrococcus luteus SK58]
Length = 169
Score = 42.3 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCIDGSILNS 78
+ R + ++ D+ G + V + NI +G ++ + D +L
Sbjct: 1 MERHTLSVLVEDVPGTLTRVAGLFARRAFNIHSLAVGVTEVEGLSRITVVVDADTDLLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ + + V +
Sbjct: 61 VTKQLNKLINVIKVVELT 78
>gi|302542534|ref|ZP_07294876.1| homoserine dehydrogenase [Streptomyces hygroscopicus ATCC 53653]
gi|302460152|gb|EFL23245.1| homoserine dehydrogenase [Streptomyces himastatinicus ATCC 53653]
Length = 430
Score = 42.3 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 30/88 (34%), Gaps = 10/88 (11%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
V ++ + D G++ V + E+G++I + + A +
Sbjct: 339 RLPVSPMGQVVTRYHISLDVADKPGVLAQVATVFAEHGVSIDT--VRQQGKDGEASLVVV 396
Query: 71 IDGSILNSV---LEKLSVNVTIRFVKQF 95
+ ++ +E L T+R V
Sbjct: 397 THRASDAALSATVETLRQLDTVRDVASI 424
>gi|55823432|ref|YP_141873.1| D-3-phosphoglycerate dehydrogenase [Streptococcus thermophilus
CNRZ1066]
gi|116628221|ref|YP_820840.1| D-3-phosphoglycerate dehydrogenase [Streptococcus thermophilus
LMD-9]
gi|55739417|gb|AAV63058.1| D-3-phosphoglycerate dehydrogenase [Streptococcus thermophilus
CNRZ1066]
gi|116101498|gb|ABJ66644.1| D-3-phosphoglycerate dehydrogenase [Streptococcus thermophilus
LMD-9]
Length = 392
Score = 42.3 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NS 78
I ++N ++ IV + + ++ I ++ E+A + L +D + +
Sbjct: 315 APYRITLINKNVPNIVARISTAVSDFNI--NIDNIINRSKGEYAYTLLDLDETDKSKIDE 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++ K + I V+ +
Sbjct: 373 LVAKFEASDNIVRVRLIK 390
>gi|325696284|gb|EGD38175.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
sanguinis SK160]
gi|327474593|gb|EGF19998.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
sanguinis SK408]
Length = 391
Score = 42.3 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I ++N ++ IV + + + I ++ +
Sbjct: 298 GEIINSVNFPNVR-QALSAPYRITLINKNVPNIVARISTAVSDLNI--NIDNIINRSKGD 354
Query: 64 HAISFLCIDGSIL---NSVLEKLSVNVTIRFVKQFE 96
+A + L +D S +++K + I V+ +
Sbjct: 355 YAYTLLDLDESDESKIQELVDKFENSDNIVRVRLIK 390
>gi|295394398|ref|ZP_06804622.1| acetolactate synthase [Brevibacterium mcbrellneri ATCC 49030]
gi|294972750|gb|EFG48601.1| acetolactate synthase [Brevibacterium mcbrellneri ATCC 49030]
Length = 171
Score = 42.3 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID--GSIL 76
+ + R + ++ + G + +L G NI +G ++ E + + +D + L
Sbjct: 1 MTVSRHTLSVLIENKPGALTRFTGLLARRGFNIDSLAVGTTEIEEISRITVVVDVRDTPL 60
Query: 77 NSVLEKLSVNVTIRFV 92
V ++L+ + + +
Sbjct: 61 EQVTKQLNKLINVIKI 76
>gi|70998716|ref|XP_754080.1| D-3-phosphoglycerate dehydrogenase [Aspergillus fumigatus Af293]
gi|66851716|gb|EAL92042.1| D-3-phosphoglycerate dehydrogenase [Aspergillus fumigatus Af293]
gi|159126186|gb|EDP51302.1| D-3-phosphoglycerate dehydrogenase [Aspergillus fumigatus A1163]
Length = 472
Score = 42.3 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ I + + + ++ ++ G++ V ILG++ ++ + A
Sbjct: 388 VTLRSITME-EPNHARVIYIHHNVPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMA 442
Query: 70 C---IDGSILNSVLEKLSVNVTIRFVKQF 95
+D + + + E+L + +
Sbjct: 443 DISNVDNATIKELYERLESLSSRIMTRIL 471
>gi|317131186|ref|YP_004090500.1| acetolactate synthase, small subunit [Ethanoligenens harbinense
YUAN-3]
gi|315469165|gb|ADU25769.1| acetolactate synthase, small subunit [Ethanoligenens harbinense
YUAN-3]
Length = 174
Score = 42.3 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLE 81
+ ++ + G++ V + NI +G +Q + + +DG V +
Sbjct: 3 HTLSVLVENRPGVLSKVAGLFSRRAFNIDSLAVGVTQDPSVSRITIVVDGDEYTTEQVEK 62
Query: 82 KLSVNVTIRFVKQF 95
+L+ + + VK
Sbjct: 63 QLNKLIDVIKVKTL 76
>gi|320008409|gb|ADW03259.1| acetolactate synthase, small subunit [Streptomyces flavogriseus
ATCC 33331]
Length = 175
Score = 42.3 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ + G++ + + G NI +G ++ + + + ++G L V +
Sbjct: 5 HTLSVLVENKPGVLARITALFSRRGFNIDSLAVGTTEHPDISRITIVVNVEGLPLEQVTK 64
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + + + E
Sbjct: 65 QLNKLVNVLKIVELE 79
>gi|218778417|ref|YP_002429735.1| acetolactate synthase, small subunit [Desulfatibacillum
alkenivorans AK-01]
gi|218759801|gb|ACL02267.1| acetolactate synthase, small subunit [Desulfatibacillum
alkenivorans AK-01]
Length = 165
Score = 42.3 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCIDGSILNSV 79
+ ++ I+ D G++ + + G NIA + + S D ++ +
Sbjct: 4 EQHVLSILVEDRPGVLSRIAGLFSGRGFNIASLCVANAASEGLSRITLVTQADPLVIEQI 63
Query: 80 LEKLSVNVTIRFVKQF 95
+++L + + V
Sbjct: 64 IKQLRKLINVVKVTDL 79
>gi|55980768|ref|YP_144065.1| prephenate dehydrogenase [Thermus thermophilus HB8]
gi|55772181|dbj|BAD70622.1| prephenate dehydrogenase [Thermus thermophilus HB8]
Length = 359
Score = 42.3 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL 56
+ + D G + + LGE G+NI +
Sbjct: 289 PEMHDLVVQVPDRPGEIARIATALGEAGVNIKDIEV 324
>gi|325690665|gb|EGD32666.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
sanguinis SK115]
Length = 391
Score = 42.3 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I ++N ++ IV + + + I ++ +
Sbjct: 298 GEIINSVNFPNVR-QALSAPYRITLINKNVPNIVARISTAVSDLNI--NIDNIINRSKGD 354
Query: 64 HAISFLCIDGSIL---NSVLEKLSVNVTIRFVKQFE 96
+A + L +D S +++K + I V+ +
Sbjct: 355 YAYTLLDLDESDESKIQELVDKFENSDNIVRVRLIK 390
>gi|282861274|ref|ZP_06270339.1| acetolactate synthase, small subunit [Streptomyces sp. ACTE]
gi|282563932|gb|EFB69469.1| acetolactate synthase, small subunit [Streptomyces sp. ACTE]
Length = 175
Score = 42.3 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ + G++ + + G NI +G ++ + + + ++G L V +
Sbjct: 5 HTLSVLVENKPGVLARITALFSRRGFNIDSLAVGTTEHPDISRITIVVNVEGLPLEQVTK 64
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + + + E
Sbjct: 65 QLNKLVNVLKIVELE 79
>gi|312863534|ref|ZP_07723772.1| 4-phosphoerythronate dehydrogenase [Streptococcus vestibularis
F0396]
gi|311101070|gb|EFQ59275.1| 4-phosphoerythronate dehydrogenase [Streptococcus vestibularis
F0396]
Length = 392
Score = 42.3 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NS 78
I ++N ++ IV + + ++ I ++ E+A + L +D + +
Sbjct: 315 APYRITLINKNVPNIVARISTAVSDFNI--NIDNIINRSKGEYAYTLLDLDETDKSKIDE 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++ K + I V+ +
Sbjct: 373 LVAKFEASDNIVRVRLIK 390
>gi|297566035|ref|YP_003685007.1| Prephenate dehydrogenase [Meiothermus silvanus DSM 9946]
gi|296850484|gb|ADH63499.1| Prephenate dehydrogenase [Meiothermus silvanus DSM 9946]
Length = 360
Score = 42.3 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHL--GRSQSTEHAISFLCIDG-SILNSVLEK 82
+ + D G + V LGE GINI +F + R + + F ++ VLE
Sbjct: 295 LVVQVPDKPGQIARVSTALGEAGINIKNFEVLAIRDEGGAIRMGFGSLEEREAAKKVLEG 354
Query: 83 L 83
+
Sbjct: 355 I 355
>gi|225175262|ref|ZP_03729258.1| MgtC/SapB transporter [Dethiobacter alkaliphilus AHT 1]
gi|225169438|gb|EEG78236.1| MgtC/SapB transporter [Dethiobacter alkaliphilus AHT 1]
Length = 242
Score = 42.3 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 31/75 (41%), Gaps = 8/75 (10%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ-----STEHAISFLCIDGSI---LN 77
+ + D G++ +G +LG++G+ I + L S + L ++ +
Sbjct: 150 LWVRAVDQPGLLGRIGTVLGDHGVGITNVSLTESNFMEAYKADTVAIELTVNIPVGFNSQ 209
Query: 78 SVLEKLSVNVTIRFV 92
++E+L + V
Sbjct: 210 RLMEQLLRVPGMLEV 224
>gi|77457254|ref|YP_346759.1| homoserine dehydrogenase [Pseudomonas fluorescens Pf0-1]
gi|77381257|gb|ABA72770.1| homoserine dehydrogenase [Pseudomonas fluorescens Pf0-1]
Length = 434
Score = 42.3 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 27/91 (29%), Gaps = 8/91 (8%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIEACESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEHDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVT-------IRFVKQFEFN 98
+ + + ++ + ++ N
Sbjct: 404 LEQHINDAIAALEALAGVVGPVVRIRVEHLN 434
>gi|192360692|ref|YP_001983035.1| GTP pyrophosphokinase [Cellvibrio japonicus Ueda107]
gi|190686857|gb|ACE84535.1| GTP pyrophosphokinase [Cellvibrio japonicus Ueda107]
Length = 748
Score = 42.3 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 5/72 (6%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID----GSILNSVLE 81
I I D G++ + +L INI+ + + ++ + VL
Sbjct: 674 IIIEAYDRYGLLKDITTLLDSERINISAMQTLSDKRKNTVDMLVTVEIRGFAELS-RVLT 732
Query: 82 KLSVNVTIRFVK 93
KL+ I +
Sbjct: 733 KLNQLPNIASAR 744
>gi|297559154|ref|YP_003678128.1| acetolactate synthase, small subunit [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296843602|gb|ADH65622.1| acetolactate synthase, small subunit [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 174
Score = 42.3 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNS 78
+ + ++ D GI+ + G NI + ++ + + + D L
Sbjct: 1 MSSHTLSVLVEDTPGILARASALFSRRGFNIDSLSVSNTEYPGLSRMTIVVNCDLHPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFEFN 98
V ++L+ V + VK E +
Sbjct: 61 VTKQLNKLVNV--VKIVEMD 78
>gi|322516309|ref|ZP_08069237.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
vestibularis ATCC 49124]
gi|322125197|gb|EFX96581.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
vestibularis ATCC 49124]
Length = 392
Score = 42.3 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NS 78
I ++N ++ IV + + ++ I ++ E+A + L +D + +
Sbjct: 315 APYRITLINKNVPNIVARISTAVSDFNI--NIDNIINRSKGEYAYTLLDLDETDKSKIDE 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++ K + I V+ +
Sbjct: 373 LVAKFEASDNIVRVRLIK 390
>gi|156307264|ref|XP_001617606.1| hypothetical protein NEMVEDRAFT_v1g225948 [Nematostella vectensis]
gi|156194786|gb|EDO25506.1| predicted protein [Nematostella vectensis]
Length = 377
Score = 42.3 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL GINI + L
Sbjct: 287 PIEACESAYYLRIQAKDHPGVLAQVASILSARGINIESIMQKEVEEQDGLVPMILVTHRV 346
Query: 75 ILNSVLEKLSVNVTIRFV 92
+ + E +S + V
Sbjct: 347 VEAQINEAISALEALEDV 364
>gi|239917376|ref|YP_002956934.1| acetolactate synthase, small subunit [Micrococcus luteus NCTC
2665]
gi|281414140|ref|ZP_06245882.1| acetolactate synthase 3 regulatory subunit [Micrococcus luteus
NCTC 2665]
gi|239838583|gb|ACS30380.1| acetolactate synthase, small subunit [Micrococcus luteus NCTC
2665]
Length = 169
Score = 42.3 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCIDGSILNS 78
+ R + ++ D+ G + V + NI +G ++ + D +L
Sbjct: 1 MERHTLSVLVEDVPGTLTRVAGLFARRAFNIHSLAVGVTEVEGLSRITVVVDADTDLLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ + + V +
Sbjct: 61 VTKQLNKLINVIKVVELT 78
>gi|294644201|ref|ZP_06721975.1| acetolactate synthase, small subunit [Bacteroides ovatus SD CC
2a]
gi|294805763|ref|ZP_06764642.1| acetolactate synthase, small subunit [Bacteroides xylanisolvens
SD CC 1b]
gi|292640491|gb|EFF58735.1| acetolactate synthase, small subunit [Bacteroides ovatus SD CC
2a]
gi|294447086|gb|EFG15674.1| acetolactate synthase, small subunit [Bacteroides xylanisolvens
SD CC 1b]
Length = 185
Score = 42.3 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + +I G++ V + INI ++ S + D I+ V++
Sbjct: 7 YTIIVHSENIAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDIIEKVVK 66
Query: 82 KLSVNVTIRFVKQFE 96
++ + + F
Sbjct: 67 QIEKKIDVIQAHYFT 81
>gi|125718513|ref|YP_001035646.1| D-3-phosphoglycerate dehydrogenase, putative [Streptococcus
sanguinis SK36]
gi|125498430|gb|ABN45096.1| D-3-phosphoglycerate dehydrogenase, putative [Streptococcus
sanguinis SK36]
Length = 391
Score = 42.3 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I ++N ++ IV + + + I ++ +
Sbjct: 298 GEIINSVNFPNVR-QALSAPYRITLINKNVPNIVARISTAVSDLNI--NIDNIINRSKGD 354
Query: 64 HAISFLCIDGSIL---NSVLEKLSVNVTIRFVKQFE 96
+A + L +D S +++K + I V+ +
Sbjct: 355 YAYTLLDLDESDESKIQDLVDKFENSDNIVRVRLIK 390
>gi|322386927|ref|ZP_08060551.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
cristatus ATCC 51100]
gi|321269209|gb|EFX52145.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
cristatus ATCC 51100]
Length = 391
Score = 42.3 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I ++N ++ IV + + + I ++ +
Sbjct: 298 GEIINSVNFPNVR-QALSAPYRITLINKNVPNIVARISTAVSDLNI--NIDNIINRSKGD 354
Query: 64 HAISFLCIDGSIL---NSVLEKLSVNVTIRFVKQFE 96
+A + L +D S +++K + I V+ +
Sbjct: 355 YAYTLLDLDESDEGKIQELVDKFENSDNIVRVRLIK 390
>gi|325687050|gb|EGD29073.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
sanguinis SK72]
gi|325694994|gb|EGD36898.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
sanguinis SK150]
gi|328946597|gb|EGG40735.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
sanguinis SK1087]
Length = 391
Score = 42.3 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I ++N ++ IV + + + I ++ +
Sbjct: 298 GEIINSVNFPNVR-QALSAPYRITLINKNVPNIVARISTAVSDLNI--NIDNIINRSKGD 354
Query: 64 HAISFLCIDGSIL---NSVLEKLSVNVTIRFVKQFE 96
+A + L +D S +++K + I V+ +
Sbjct: 355 YAYTLLDLDESDESKIQELVDKFENSDNIVRVRLIK 390
>gi|288817784|ref|YP_003432131.1| amino acid-binding ACT domain protein [Hydrogenobacter thermophilus
TK-6]
gi|288787183|dbj|BAI68930.1| amino acid-binding ACT domain protein [Hydrogenobacter thermophilus
TK-6]
gi|308751382|gb|ADO44865.1| amino acid-binding ACT domain protein [Hydrogenobacter thermophilus
TK-6]
Length = 174
Score = 42.3 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + +D GIV V +L + GINI + L + + + + + V E+L
Sbjct: 94 YRLVVFGSDKPGIVYSVSKLLAQMGINI--YDLKTEKRGDLYVMIIQAESQ--EDVFEEL 149
Query: 84 -SVNVTIRF 91
IR
Sbjct: 150 SKKLDDIRE 158
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI-LNSVLEKL 83
++ I D GIV V L G+NI + R + + + +I ++LE L
Sbjct: 5 ILSIFGKDRPGIVAGVSEALYRLGLNIEDSSMTRLNGEFTIMLIVSSERNITSENILESL 64
Query: 84 SVNVT 88
Sbjct: 65 KDVKE 69
>gi|226311206|ref|YP_002771100.1| acetolactate synthase small subunit [Brevibacillus brevis NBRC
100599]
gi|226094154|dbj|BAH42596.1| acetolactate synthase small subunit [Brevibacillus brevis NBRC
100599]
Length = 168
Score = 42.3 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNS 78
+ + I ++ D G++ V + G+ G NI +G ++ + + D +N
Sbjct: 1 MQQHTISVLVNDQPGVLTRVATLFGQRGFNIDSITVGGTEEQGLSRMIISTGGDDRQINQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
++++L + + V
Sbjct: 61 LMKQLHKLIDVISVTNLS 78
>gi|206889533|ref|YP_002249775.1| homoserine dehydrogenase (HDH): ThrA, metL [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206741471|gb|ACI20528.1| homoserine dehydrogenase (HDH): ThrA, metL [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 426
Score = 42.3 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 23/71 (32%), Gaps = 2/71 (2%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT--I 89
D G++ + + G++ I+IA + + VLE L +
Sbjct: 352 DRPGVLSKISGVFGQHNISIASVIQKGRSKAGAVPLVILTHKAKEKDVLEALEKIDKLPV 411
Query: 90 RFVKQFEFNVD 100
K V+
Sbjct: 412 VAAKSVFIRVE 422
>gi|301117504|ref|XP_002906480.1| acetolactate synthase small subunit, putative [Phytophthora
infestans T30-4]
gi|262107829|gb|EEY65881.1| acetolactate synthase small subunit, putative [Phytophthora
infestans T30-4]
Length = 241
Score = 42.3 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R +I + + G + + N+ G NI +GR++ E + + ++G+ SV+
Sbjct: 42 QRHVIAALVVNQPGCLAEIANLFAARGYNIDSLVVGRTEVEELSRMTVVVNGT-AQSVVN 100
Query: 82 KLSVNVTIRFVKQFEF 97
+ +V
Sbjct: 101 MKKQLEDVVYVAVVNI 116
>gi|262203119|ref|YP_003274327.1| acetolactate synthase small subunit [Gordonia bronchialis DSM
43247]
gi|262086466|gb|ACY22434.1| acetolactate synthase, small subunit [Gordonia bronchialis DSM
43247]
Length = 167
Score = 42.3 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLE 81
+ ++ D G++ V + G NI +G ++ + + ++ L V +
Sbjct: 5 HTLSVLVEDRPGVLARVSALFSRRGFNIESLAVGPTELKGISRMTIMVSVEDFPLEQVTK 64
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 65 QLNKLINVIKI 75
>gi|146281582|ref|YP_001171735.1| homoserine dehydrogenase [Pseudomonas stutzeri A1501]
gi|145569787|gb|ABP78893.1| homoserine dehydrogenase [Pseudomonas stutzeri A1501]
Length = 431
Score = 42.3 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 5/83 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL----N 77
+ I D G++ V IL E GINI ++ + + + + ++ +
Sbjct: 347 SAYYLRIQAKDHPGVLAQVATILSERGINIESIMQKEAEVQDGLVPVILVTHRVVEQRID 406
Query: 78 SVLEKLSVNVTIRFVKQFEFNVD 100
+ L + K V+
Sbjct: 407 DAIAALERLDDVVD-KVVRIRVE 428
>gi|27380176|ref|NP_771705.1| GTP pyrophosphokinase [Bradyrhizobium japonicum USDA 110]
gi|27353330|dbj|BAC50330.1| GTP pyrophosphokinase [Bradyrhizobium japonicum USDA 110]
Length = 762
Score = 42.3 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST--EHAISFLCIDGSILNSVLEK 82
I + N + G + + ++ E+ NI + + R E I D L+++L +
Sbjct: 688 RIRVENVNEPGALAQIATVIAEHDGNIDNISMQRRSPDFTETTIDLEVYDLKHLSAILAQ 747
Query: 83 LSVNVTIRFVKQFE 96
L + V++
Sbjct: 748 LRAKAVVARVERVN 761
>gi|315604487|ref|ZP_07879552.1| acetolactate synthase small subunit [Actinomyces sp. oral taxon
180 str. F0310]
gi|315313814|gb|EFU61866.1| acetolactate synthase small subunit [Actinomyces sp. oral taxon
180 str. F0310]
Length = 170
Score = 42.3 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSV 79
R + ++ + G++ V + NI +G ++ E + + D + + V
Sbjct: 3 NRHTLAVLVENKPGVLTRVAALFARRAFNIKSLAVGETEHPEVSRMTIIVDADSAPIEQV 62
Query: 80 LEKLSVNVTIRFVKQFE 96
+++L+ + + V + E
Sbjct: 63 VKQLNKLINVLKVVELE 79
>gi|160889256|ref|ZP_02070259.1| hypothetical protein BACUNI_01678 [Bacteroides uniformis ATCC
8492]
gi|156861263|gb|EDO54694.1| hypothetical protein BACUNI_01678 [Bacteroides uniformis ATCC
8492]
Length = 199
Score = 42.3 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 32/88 (36%), Gaps = 2/88 (2%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+I+E +D I + + + G++ V + INI ++ S +
Sbjct: 6 EIKEFTLSMDKKLYTIIVHSENFAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTIT 65
Query: 71 --IDGSILNSVLEKLSVNVTIRFVKQFE 96
D + V ++++ + + F
Sbjct: 66 AWTDKDTIEKVTKQITKKIDVLQAHYFT 93
>gi|119386386|ref|YP_917441.1| homoserine dehydrogenase [Paracoccus denitrificans PD1222]
gi|119376981|gb|ABL71745.1| homoserine dehydrogenase [Paracoccus denitrificans PD1222]
Length = 438
Score = 42.3 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
I + D G + V +LG+ GI+I +E L +
Sbjct: 352 AVPAAYYIRLQLTDKPGALAKVATVLGDSGISIDRMRQYGHSRSEGVAPVLIVTHKTTPE 411
Query: 79 VLE-KLSVNV--TIRFVKQFEFNVD 100
++ + + + E ++
Sbjct: 412 AIDHAIEALPRTGVIAGEPVELRIE 436
>gi|154331555|ref|XP_001561595.1| D-3-phosphoglycerate dehydrogenase-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134058914|emb|CAM36741.1| D-3-phosphoglycerate dehydrogenase-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 408
Score = 42.3 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ V+ ++ G + + I + NI L S++ + +D + + ++++
Sbjct: 339 RLTNVHVNVPGALKDINKIALDLDCNIGMQFLATSKAIG--YLIMDVDKDVAAELRKRIA 396
Query: 85 VNV 87
Sbjct: 397 ELK 399
>gi|78184281|ref|YP_376716.1| homoserine dehydrogenase [Synechococcus sp. CC9902]
gi|78168575|gb|ABB25672.1| homoserine dehydrogenase [Synechococcus sp. CC9902]
Length = 435
Score = 42.3 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVNVT 88
D G++ +G G+ G++I + I + + ++ L+ +
Sbjct: 365 QDAPGVIGRIGGCFGDGGVSIQSIVQFNASKAGAEIVVITHEVSQKKMDEALQSIQALPE 424
Query: 89 I 89
+
Sbjct: 425 V 425
>gi|325186221|emb|CCA20722.1| unnamed protein product [Albugo laibachii Nc14]
Length = 340
Score = 42.3 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 1/83 (1%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
R +I + + G + + N+ G N+ +GR++ E + + + G+
Sbjct: 136 YKASAPTRRHVIAALVVNQPGCLAEIANLFAARGYNMDSLVVGRTEVEELSRMTVVVQGT 195
Query: 75 ILNSVLEKLSVNVTIRFVKQFEF 97
+V+ + V
Sbjct: 196 -DENVINMKKQLEDVVHVAVVNI 217
>gi|289642879|ref|ZP_06475015.1| acetolactate synthase, small subunit [Frankia symbiont of Datisca
glomerata]
gi|289507356|gb|EFD28319.1| acetolactate synthase, small subunit [Frankia symbiont of Datisca
glomerata]
Length = 174
Score = 42.3 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ + G++ V + G NI +G ++ + + + +D L V +
Sbjct: 4 HTLSVLVENKPGVLARVAGLFSRRGFNIESLAVGPTEHDDISRMTIVVSVDELPLEQVTK 63
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 64 QLNKLVNVIKI 74
>gi|121638884|ref|YP_979108.1| acetolactate synthase 3 regulatory subunit [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|121494532|emb|CAL73013.1| Probable acetolactate synthase (small subunit) ilvN
[Mycobacterium bovis BCG str. Pasteur 1173P2]
Length = 168
Score = 42.3 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
+ + ++ D G++ V + G NI +G ++ + + + + + + L
Sbjct: 1 MSPKTHTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATECKDRSRMIIVVSAEDTPL 60
Query: 77 NSVLEKLSVNVTIRFV 92
+ ++L+ + + +
Sbjct: 61 EQITKQLNKLINVIKI 76
>gi|258514296|ref|YP_003190518.1| Prephenate dehydrogenase [Desulfotomaculum acetoxidans DSM 771]
gi|257778001|gb|ACV61895.1| Prephenate dehydrogenase [Desulfotomaculum acetoxidans DSM 771]
Length = 364
Score = 42.3 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC-IDGSILNSV 79
I + D G++ V LGE INI+ + R + L ID +
Sbjct: 291 PALYEIVVTIPDRPGMIADVTGYLGELDINISDIEILRVREGHEGTIRLAFIDEFRQEAA 350
Query: 80 LEKLSV 85
L L
Sbjct: 351 LRTLQE 356
>gi|327479760|gb|AEA83070.1| homoserine dehydrogenase [Pseudomonas stutzeri DSM 4166]
Length = 434
Score = 42.3 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 5/83 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL----N 77
+ I D G++ V IL E GINI ++ + + + + ++ +
Sbjct: 350 SAYYLRIQAKDHPGVLAQVATILSERGINIESIMQKEAEVQDGLVPVILVTHRVVEQRID 409
Query: 78 SVLEKLSVNVTIRFVKQFEFNVD 100
+ L + K V+
Sbjct: 410 DAIAALERLDDVVD-KVVRIRVE 431
>gi|317495417|ref|ZP_07953786.1| L-serine dehydratase [Gemella moribillum M424]
gi|316914476|gb|EFV35953.1| L-serine dehydratase [Gemella moribillum M424]
Length = 222
Score = 42.3 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 10/95 (10%), Positives = 32/95 (33%), Gaps = 7/95 (7%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVN----ADILGIVVFVGNILGEYGINIAHFHLGR 58
GK ++ + ++ + + + ++ + NI G+ + +
Sbjct: 126 GGGKMVIFELLGFDVNLSGDFPSYFVFYKFSEKNKIHLLSEINNIFGDNKV---SDNFSD 182
Query: 59 SQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVK 93
S + + + I +E+++ + VK
Sbjct: 183 SILEGVNLLVVEVLEEISTKQIERIANLEYVNEVK 217
>gi|304315368|ref|YP_003850515.1| energy-converting hydrogenase B, subunit Q [Methanothermobacter
marburgensis str. Marburg]
gi|302588827|gb|ADL59202.1| energy-converting hydrogenase B, subunit Q [Methanothermobacter
marburgensis str. Marburg]
Length = 218
Score = 42.3 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I + G++ + ++ INI AH ++ R + ++ S+L+++
Sbjct: 6 LSIKTVERPGVLSEITGMIASRNINITYAHLYVERDGHGSIYMELEDVEDM--ESLLDEI 63
Query: 84 SVNVTIRFVKQ 94
+ T+ V+
Sbjct: 64 RASKTVVDVRV 74
>gi|254819124|ref|ZP_05224125.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
intracellulare ATCC 13950]
Length = 168
Score = 42.3 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
+ + ++ D G++ V + G NI +G ++ + + + + + + L
Sbjct: 1 MSPQTHTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATEQKDMSRMTIVVSAEETPL 60
Query: 77 NSVLEKLSVNVTIRFVKQFEFNVD 100
+ ++L+ + + K E + D
Sbjct: 61 EQITKQLNKLINVI--KIVELDDD 82
>gi|160885305|ref|ZP_02066308.1| hypothetical protein BACOVA_03304 [Bacteroides ovatus ATCC 8483]
gi|237714713|ref|ZP_04545194.1| acetohydroxyacid synthase small subunit [Bacteroides sp. D1]
gi|262407010|ref|ZP_06083559.1| acetolactate synthase, small subunit [Bacteroides sp. 2_1_22]
gi|293373935|ref|ZP_06620277.1| acetolactate synthase, small subunit [Bacteroides ovatus SD CMC
3f]
gi|298479729|ref|ZP_06997929.1| acetolactate synthase, small subunit [Bacteroides sp. D22]
gi|156109655|gb|EDO11400.1| hypothetical protein BACOVA_03304 [Bacteroides ovatus ATCC 8483]
gi|229445038|gb|EEO50829.1| acetohydroxyacid synthase small subunit [Bacteroides sp. D1]
gi|262355713|gb|EEZ04804.1| acetolactate synthase, small subunit [Bacteroides sp. 2_1_22]
gi|292631156|gb|EFF49792.1| acetolactate synthase, small subunit [Bacteroides ovatus SD CMC
3f]
gi|295084846|emb|CBK66369.1| acetolactate synthase, small subunit [Bacteroides xylanisolvens
XB1A]
gi|298274119|gb|EFI15680.1| acetolactate synthase, small subunit [Bacteroides sp. D22]
Length = 185
Score = 41.9 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + +I G++ V + INI ++ S + D I+ V++
Sbjct: 7 YTIIVHSENIAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDIIEKVVK 66
Query: 82 KLSVNVTIRFVKQFE 96
++ + + F
Sbjct: 67 QIEKKIDVIQAHYFT 81
>gi|6647287|gb|AAF21129.1|L78665_3 homoserine dehydrogenase [Methylobacillus flagellatus]
Length = 437
Score = 41.9 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 24/82 (29%), Gaps = 5/82 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL----N 77
+ + D G++ V ILG+ I+I Q E + + +
Sbjct: 352 SAYYLRVRAVDKPGVLADVTRILGDRQISIDAMIQKEPQEGEDQADIIILTHVTAEKNMD 411
Query: 78 SVLEKLSVNVTIR-FVKQFEFN 98
+ + I V +
Sbjct: 412 DAIAAIEALPAISGSVTRLRME 433
>gi|327462990|gb|EGF09311.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
sanguinis SK1]
Length = 391
Score = 41.9 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I ++N ++ IV + + + I ++ +
Sbjct: 298 GEIINSVNFPNVR-QALSAPYRITLINKNVPNIVARISTAVSDLNI--NIDNIINRSKGD 354
Query: 64 HAISFLCIDGSIL---NSVLEKLSVNVTIRFVKQFE 96
+A + L +D S +++K + I V+ +
Sbjct: 355 YAYTLLDLDESDESKIQELVDKFEDSDNIVRVRLIK 390
>gi|324993719|gb|EGC25638.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
sanguinis SK405]
gi|324994968|gb|EGC26881.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
sanguinis SK678]
gi|327490151|gb|EGF21939.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
sanguinis SK1058]
Length = 391
Score = 41.9 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I ++N ++ IV + + + I ++ +
Sbjct: 298 GEIINSVNFPNVR-QALSAPYRITLINKNVPNIVARISTAVSDLNI--NIDNIINRSKGD 354
Query: 64 HAISFLCIDGSIL---NSVLEKLSVNVTIRFVKQFE 96
+A + L +D S +++K + I V+ +
Sbjct: 355 YAYTLLDLDESDQSKIQDLVDKFENSDNIVRVRLIK 390
>gi|270295953|ref|ZP_06202153.1| acetolactate synthase, small subunit [Bacteroides sp. D20]
gi|270273357|gb|EFA19219.1| acetolactate synthase, small subunit [Bacteroides sp. D20]
Length = 196
Score = 41.9 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 32/88 (36%), Gaps = 2/88 (2%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+I+E +D I + + + G++ V + INI ++ S +
Sbjct: 6 EIKEFTLSMDKKLYTIIVHSENFAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTIT 65
Query: 71 --IDGSILNSVLEKLSVNVTIRFVKQFE 96
D + V ++++ + + F
Sbjct: 66 AWTDKDTIEKVTKQITKKIDVLQAHYFT 93
>gi|78224737|ref|YP_386484.1| amino acid-binding ACT [Geobacter metallireducens GS-15]
gi|78195992|gb|ABB33759.1| Amino acid-binding ACT [Geobacter metallireducens GS-15]
Length = 189
Score = 41.9 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 34/86 (39%), Gaps = 9/86 (10%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ M+ + +D GI+ V N L E +NI + + E + L ++ ++ +
Sbjct: 100 EGELCMVSVYGSDRPGIIYRVTNELAERKVNITDLNTKLIGTKEEPVYVLMLEAALPEGI 159
Query: 80 L--------EKLSVNVTI-RFVKQFE 96
+ +K+ + + V+
Sbjct: 160 VVEDVAAMFDKIKKEMNVEISVRSIT 185
>gi|16082128|ref|NP_394565.1| hypothetical protein Ta1106 [Thermoplasma acidophilum DSM 1728]
gi|10640419|emb|CAC12233.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 170
Score = 41.9 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 26/63 (41%)
Query: 33 ILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
GI+ V +I+ + GI+I + + E + + + + ++ +L +R +
Sbjct: 108 KPGIIAGVSSIIAKRGISIRQVIVDDPELVEDPKAVVVTEQKVPPDIIPELKSVEGVRAI 167
Query: 93 KQF 95
Sbjct: 168 TIL 170
>gi|297626354|ref|YP_003688117.1| GTP pyrophosphokinase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922119|emb|CBL56687.1| GTP pyrophosphokinase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 783
Score = 41.9 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D G++ + L + +NI A + ++Q + ++F D + L+ V+ + +
Sbjct: 716 DRPGVLADITRTLADEQVNISSATVAVSKNQLAKLKMTFESTDPTHLHHVMATIRKVPGV 775
Query: 90 RFV 92
Sbjct: 776 YDA 778
>gi|120403115|ref|YP_952944.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
vanbaalenii PYR-1]
gi|119955933|gb|ABM12938.1| acetolactate synthase, small subunit [Mycobacterium vanbaalenii
PYR-1]
Length = 166
Score = 41.9 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
+ ++ D G++ V ++ G NI +G ++ + + + +D + +
Sbjct: 5 HTLSVLVEDKPGVLARVASLFSRRGYNIQSLAVGATEHKDLSRMTIVVDVEESPLEQITK 64
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 65 QLNKLINVIKI 75
>gi|329894260|ref|ZP_08270146.1| Homoserine dehydrogenase [gamma proteobacterium IMCC3088]
gi|328923191|gb|EGG30513.1| Homoserine dehydrogenase [gamma proteobacterium IMCC3088]
Length = 435
Score = 41.9 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 32/94 (34%), Gaps = 8/94 (8%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+I + + + + D G++ V +IL E GI+I + ++S
Sbjct: 337 ITEIDSVPMAQVVTPWYLRLNVQDKPGVMSKVSSILSERGISIEALIQKPPTKGQQSVSL 396
Query: 69 LCIDGSILNS----VLEKLSVNV----TIRFVKQ 94
+ + + + ++ + ++
Sbjct: 397 VVLTNPAEQAQLLGAVAEIEALETTLSDVMRIRV 430
>gi|309812118|ref|ZP_07705876.1| homoserine dehydrogenase [Dermacoccus sp. Ellin185]
gi|308433805|gb|EFP57679.1| homoserine dehydrogenase [Dermacoccus sp. Ellin185]
Length = 450
Score = 41.9 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLG-RSQSTEHAISFLCIDGSILNSV---LEKLSVNV 87
D G++ V + GE+G++I G R A + ++ ++ +
Sbjct: 377 DEPGVLGRVTSAFGEHGVSIESMRQGVRRSEDGLASLTFMTHQAPEAALAATVDSIKKLA 436
Query: 88 TIRFVKQF 95
+ V
Sbjct: 437 DVDCVSSV 444
>gi|229592392|ref|YP_002874511.1| homoserine dehydrogenase [Pseudomonas fluorescens SBW25]
gi|229364258|emb|CAY51972.1| homoserine dehydrogenase [Pseudomonas fluorescens SBW25]
Length = 434
Score = 41.9 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 27/91 (29%), Gaps = 8/91 (8%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
+ + I D G++ V +IL E GINI + + + + +
Sbjct: 344 PIEACESAYYLRIQAQDHPGVLAQVASILSERGINIESIMQKEVEEQNGQVPMILLTHRV 403
Query: 76 LN----SVLEKLSVNVT----IRFVKQFEFN 98
+ L + ++ N
Sbjct: 404 REQHINDAIAALEALQGVVGPVVRIRVEHLN 434
>gi|55821503|ref|YP_139945.1| D-3-phosphoglycerate dehydrogenase [Streptococcus thermophilus LMG
18311]
gi|55737488|gb|AAV61130.1| D-3-phosphoglycerate dehydrogenase [Streptococcus thermophilus LMG
18311]
Length = 392
Score = 41.9 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NS 78
I ++N ++ IV + + ++ I ++ E+A + L +D + +
Sbjct: 315 APYRITLINKNVPNIVASISTAVSDFNI--NIDNIINRSKGEYAYTLLDLDETDKSKIDE 372
Query: 79 VLEKLSVNVTIRFVKQFE 96
++ K + I V+ +
Sbjct: 373 LVAKFEASDNIVRVRLIK 390
>gi|76801353|ref|YP_326361.1| hypothetical protein NP1404A [Natronomonas pharaonis DSM 2160]
gi|76557218|emb|CAI48793.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160]
Length = 167
Score = 41.9 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D GIV V ++L + G++I + T+ ++ D + ++ ++ F
Sbjct: 104 DQPGIVAAVTSLLADNGVSIRQTISEDPEFTDEPKLYIVTDEQLDGELINEVRALP---F 160
Query: 92 VKQFEFN 98
V++ E
Sbjct: 161 VRKIELE 167
>gi|256855072|ref|ZP_05560433.1| L-serine dehydratase [Enterococcus faecalis T8]
gi|257417512|ref|ZP_05594506.1| L-serine dehydratase [Enterococcus faecalis AR01/DG]
gi|256709585|gb|EEU24632.1| L-serine dehydratase [Enterococcus faecalis T8]
gi|257159340|gb|EEU89300.1| L-serine dehydratase [Enterococcus faecalis ARO1/DG]
Length = 219
Score = 41.9 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 33/95 (34%), Gaps = 5/95 (5%)
Query: 3 SDGKPRF--IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G I++ N + ++ ++N + + + L + NI + R
Sbjct: 128 GGGTIEVKYIELDGFNVQLHGPLPILLVINQEEQAMQA-FKDTLQKN--NIQVNAVSRYV 184
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +D + ++SV E+L +
Sbjct: 185 EGDQILFIFDLDSAPISSVKEQLFSLDDTSKIILL 219
>gi|289580584|ref|YP_003479050.1| acetolactate synthase, small subunit [Natrialba magadii ATCC 43099]
gi|289530137|gb|ADD04488.1| acetolactate synthase, small subunit [Natrialba magadii ATCC 43099]
Length = 242
Score = 41.9 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 9/93 (9%)
Query: 10 IKIQEINFDVDIGRLMICIV----NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
I+I + I + G++ V + NI +G + + A
Sbjct: 45 IRIDP-EVEAKQEPRRTVISTLVEHE--PGVLSDVSGLFSRRQFNIESLTVGPTTDDDRA 101
Query: 66 ISFLCIDGSIL--NSVLEKLSVNVTIRFVKQFE 96
L ++ + + ++L V + V++ E
Sbjct: 102 RITLVVEEPDPGIDQIKKQLRKLVPVISVRELE 134
>gi|95931364|ref|ZP_01314076.1| amino acid-binding ACT [Desulfuromonas acetoxidans DSM 684]
gi|95132580|gb|EAT14267.1| amino acid-binding ACT [Desulfuromonas acetoxidans DSM 684]
Length = 179
Score = 41.9 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 34/88 (38%), Gaps = 9/88 (10%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
++ MI + +D GIV V +L + INI + ++E + + + +
Sbjct: 88 ELPGELCMISVYGSDKPGIVYQVTKVLSDNNINIIDLNTKLVGTSERPVYVMMCETLLPE 147
Query: 78 --------SVLEKLSVNVTI-RFVKQFE 96
++ +L +++ V+
Sbjct: 148 NMTSDDIRDIMAELKKQLSVDISVRTVT 175
>gi|302383616|ref|YP_003819439.1| (p)ppGpp synthetase I, SpoT/RelA [Brevundimonas subvibrioides ATCC
15264]
gi|302194244|gb|ADL01816.1| (p)ppGpp synthetase I, SpoT/RelA [Brevundimonas subvibrioides ATCC
15264]
Length = 728
Score = 41.9 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS-----V 79
+ + G++ V ++GE G NI + + QS + +D + ++ +
Sbjct: 654 RLRATIKNAPGVLGQVATVIGEAGGNILNLKMAHRQSD---FFDVDLDVEVADAKHATSI 710
Query: 80 LEKLSVNVTIRFV 92
+ L N ++ V
Sbjct: 711 MAALRANPSVDTV 723
>gi|227202676|dbj|BAH56811.1| AT2G31810 [Arabidopsis thaliana]
Length = 264
Score = 41.9 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 27/69 (39%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D G++ + + G NI +G ++ +C +L V+E+L
Sbjct: 87 HTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNRDKALFTIVVCGTERVLQQVIEQL 146
Query: 84 SVNVTIRFV 92
V + V
Sbjct: 147 QKLVNVLKV 155
>gi|307327900|ref|ZP_07607082.1| Homoserine dehydrogenase [Streptomyces violaceusniger Tu 4113]
gi|306886418|gb|EFN17422.1| Homoserine dehydrogenase [Streptomyces violaceusniger Tu 4113]
Length = 429
Score = 41.9 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 10/88 (11%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
V +I + D G++ V + E+G++I + + A +
Sbjct: 338 RLPVSPMGDVITRYHISLDVADKPGVLAQVATVFAEHGVSIDT--VRQQGKDGEASLVVV 395
Query: 71 IDGSILNSV---LEKLSVNVTIRFVKQF 95
+ ++ +E L T+R V
Sbjct: 396 THRASDAALSSTVEALRRLDTVRGVASI 423
>gi|56718251|gb|AAW24461.1| acetolactate synthase small subunit [Phytophthora infestans]
Length = 228
Score = 41.9 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R +I + + G + + N+ G NI +GR++ E + + ++G+ SV+
Sbjct: 34 QRHVIAALVVNQPGCLAEIANLFAARGYNIDSLVVGRTEVEELSRMTVVVNGT-AQSVVN 92
Query: 82 KLSVNVTIRFVKQFEF 97
+ +V
Sbjct: 93 MKKQLEDVVYVAVVNI 108
>gi|213405501|ref|XP_002173522.1| D-3 phosphoglycerate dehydrogenase [Schizosaccharomyces japonicus
yFS275]
gi|212001569|gb|EEB07229.1| D-3 phosphoglycerate dehydrogenase [Schizosaccharomyces japonicus
yFS275]
Length = 466
Score = 41.9 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 28/93 (30%), Gaps = 11/93 (11%)
Query: 10 IKIQEINF----DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ E++ + D + + + ++ G++ V I ++ NI E A
Sbjct: 377 VNFPEVSLRNLTEADKNHVRVLFAHQNVPGVLRQVNEIFKDH--NIKSQFS--DSRGEIA 432
Query: 66 ISFLCIDGSILN---SVLEKLSVNVTIRFVKQF 95
I + + + L +
Sbjct: 433 YLVADISDCTPDSLKDLYKHLEALPFKIRTRLL 465
>gi|218185538|gb|EEC67965.1| hypothetical protein OsI_35716 [Oryza sativa Indica Group]
Length = 476
Score = 41.9 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 27/73 (36%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D G++ + + G NI +G ++ + IL V+E+L
Sbjct: 74 HTLSVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTEKILKQVVEQL 133
Query: 84 SVNVTIRFVKQFE 96
+ V + V
Sbjct: 134 NKLVNVIQVDDLS 146
>gi|62734750|gb|AAX96859.1| acetolactate synthase, small subunit, putative [Oryza sativa
Japonica Group]
gi|77549622|gb|ABA92419.1| acetolactate synthase small subunit, putative, expressed [Oryza
sativa Japonica Group]
Length = 476
Score = 41.9 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 27/73 (36%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D G++ + + G NI +G ++ + IL V+E+L
Sbjct: 74 HTLSVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTEKILKQVVEQL 133
Query: 84 SVNVTIRFVKQFE 96
+ V + V
Sbjct: 134 NKLVNVIQVDDLS 146
Score = 34.2 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 7/89 (7%)
Query: 14 EINFDVDIGR---LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+ D D + I+ D G++ V + G NI +G ++ +
Sbjct: 294 GVMADGDPTGLCSHSLSILVNDFPGVLNVVTGVFSRRGYNIQSLAVGPAEKEGTSRITTV 353
Query: 71 I---DGSILNSVLEKLSVNVTIRFVKQFE 96
+ D SI ++ +L + + V+
Sbjct: 354 VPGTDESIAK-LVHQLYKLIDVYEVQDLT 381
>gi|313680081|ref|YP_004057820.1| prephenate dehydrogenase [Oceanithermus profundus DSM 14977]
gi|313152796|gb|ADR36647.1| prephenate dehydrogenase [Oceanithermus profundus DSM 14977]
Length = 356
Score = 41.9 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 22/66 (33%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + + D G + + + LGE G+NI + + AI + +
Sbjct: 286 PVQHDLVVAVPDRPGELARITSALGEAGVNIKDIEVLNVRDEGGAIRLGFVSAEEKQAGR 345
Query: 81 EKLSVN 86
L
Sbjct: 346 RVLESI 351
>gi|20094047|ref|NP_613894.1| metabolic regulator [Methanopyrus kandleri AV19]
gi|19887027|gb|AAM01824.1| Predicted metabolic regulator containing the ACT domain
[Methanopyrus kandleri AV19]
Length = 215
Score = 41.9 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 25 MICIVN--ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG-SILNSVLE 81
M+ I ++ G + + ++ ++G NI H+ + E A ++ I+G ++
Sbjct: 1 MLAISMDVENVPGALKAIAGVIADHGGNIV--HIQQDSEGELARLYMEIEGVERPKVLVS 58
Query: 82 KLSVNVTIRFVKQFE 96
+L +R V+
Sbjct: 59 ELRSLDVVREVRVLR 73
>gi|91775257|ref|YP_545013.1| homoserine dehydrogenase [Methylobacillus flagellatus KT]
gi|91775401|ref|YP_545157.1| homoserine dehydrogenase [Methylobacillus flagellatus KT]
gi|91709244|gb|ABE49172.1| homoserine dehydrogenase [Methylobacillus flagellatus KT]
gi|91709388|gb|ABE49316.1| homoserine dehydrogenase [Methylobacillus flagellatus KT]
Length = 437
Score = 41.9 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 24/82 (29%), Gaps = 5/82 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL----N 77
+ + D G++ V ILG+ I+I Q E + + +
Sbjct: 352 SAYYLRLRAVDKPGVLADVTRILGDRQISIDAMIQKEPQEGEDQADIIILTHVTAEKNMD 411
Query: 78 SVLEKLSVNVTIR-FVKQFEFN 98
+ + I V +
Sbjct: 412 DAIAAIEALPAISGSVTRLRME 433
>gi|93005110|ref|YP_579547.1| homoserine dehydrogenase [Psychrobacter cryohalolentis K5]
gi|92392788|gb|ABE74063.1| homoserine dehydrogenase [Psychrobacter cryohalolentis K5]
Length = 448
Score = 41.9 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 6/82 (7%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---- 78
+ + D G++ + IL + GINI + + + + S
Sbjct: 366 GYYLRVHAYDSPGVLADITRILSDAGINIDAILQKPAHKLGQVPVII-LTLPVGESQMNL 424
Query: 79 VLEKLSVNVTIRFVKQFEFNVD 100
+EK+ TI K +D
Sbjct: 425 AIEKIEKLDTIID-KVVRIRLD 445
>gi|302342677|ref|YP_003807206.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfarculus baarsii DSM 2075]
gi|301639290|gb|ADK84612.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfarculus baarsii DSM 2075]
Length = 726
Score = 41.9 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFLCI-DGSILNSVLEK 82
I + +AD G+ V +L ++ INI + + + D LN + +
Sbjct: 644 RITVESADRQGLFADVAQVLKQHNINILEGEVKSLPEQRGLVNLLIQVHDTKQLNRIFAE 703
Query: 83 LSVNVTIRFVKQF 95
+ + V++
Sbjct: 704 IKKIKGVNAVRRV 716
>gi|227518021|ref|ZP_03948070.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0104]
gi|229547037|ref|ZP_04435762.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX1322]
gi|227074543|gb|EEI12506.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0104]
gi|229307965|gb|EEN73952.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX1322]
gi|327533946|gb|AEA92780.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis OG1RF]
Length = 235
Score = 41.9 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 33/95 (34%), Gaps = 5/95 (5%)
Query: 3 SDGKPRF--IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G I++ N + ++ ++N + + + L + NI + R
Sbjct: 144 GGGTIEVKYIELDGFNVQLHGPLPILLVINQEEQAMQA-FKDTLQKN--NIQVNAVSRYV 200
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +D + ++SV E+L +
Sbjct: 201 EGDQILFIFDLDSAPISSVKEQLFSLDDTSKIILL 235
>gi|118470606|ref|YP_886715.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
smegmatis str. MC2 155]
gi|302425087|sp|A0QUX7|ILVH_MYCS2 RecName: Full=Acetolactate synthase small subunit; AltName:
Full=Acetohydroxy-acid synthase small subunit;
Short=AHAS; Short=ALS
gi|118171893|gb|ABK72789.1| acetolactate synthase, small subunit [Mycobacterium smegmatis
str. MC2 155]
Length = 170
Score = 41.9 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ D G++ V ++ G NI +G ++ + + + ++ S L + +
Sbjct: 8 HTLSVLVEDKPGVLARVSSLFSRRGFNIQSLAVGATEQKDMSRMTIVVSVEDSPLEQITK 67
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 68 QLNKLINVIKI 78
>gi|309792557|ref|ZP_07687019.1| RelA/SpoT family protein [Oscillochloris trichoides DG6]
gi|308225371|gb|EFO79137.1| RelA/SpoT family protein [Oscillochloris trichoides DG6]
Length = 809
Score = 41.9 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 36/94 (38%), Gaps = 15/94 (15%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+PR + V + + D +G+ V ++ + G+NI G ++
Sbjct: 717 GGQQPR-----GYSVPVRVE-------SWDRVGLWRDVSMVIADAGVNIERVEQGSTRRV 764
Query: 63 EHA-ISFLCIDGSILN--SVLEKLSVNVTIRFVK 93
A + C SI ++L+KL+ + +
Sbjct: 765 GRAVLHVTCTIQSINQLSALLDKLNRIPDVIEAR 798
>gi|307291563|ref|ZP_07571439.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0411]
gi|306497324|gb|EFM66865.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0411]
gi|315028724|gb|EFT40656.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX4000]
gi|315147060|gb|EFT91076.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX4244]
gi|315168209|gb|EFU12226.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX1341]
gi|315171393|gb|EFU15410.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX1342]
Length = 231
Score = 41.9 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 33/95 (34%), Gaps = 5/95 (5%)
Query: 3 SDGKPRF--IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G I++ N + ++ ++N + + + L + NI + R
Sbjct: 140 GGGTIEVKYIELDGFNVQLHGPLPILLVINQEEQAMQA-FKDTLQKN--NIQVNAVSRYV 196
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + +D + ++SV E+L +
Sbjct: 197 EGDQILFIFDLDSAPISSVKEQLFSLDDTSKIILL 231
>gi|255526574|ref|ZP_05393482.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Clostridium carboxidivorans P7]
gi|296187552|ref|ZP_06855947.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Clostridium carboxidivorans P7]
gi|255509759|gb|EET86091.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Clostridium carboxidivorans P7]
gi|296048074|gb|EFG87513.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Clostridium carboxidivorans P7]
Length = 527
Score = 41.9 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 33/95 (34%), Gaps = 3/95 (3%)
Query: 3 SDGKPRFIKIQEINFDVDIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
G I+ N + +I I N+ + +L E I ++ +
Sbjct: 131 GGGMVELIEFNGYNISICGDFYELILIFNSYKDNYDKTILKVLKENY--IEPEYVNTFEK 188
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
++ + + + + +L+K+ + ++K
Sbjct: 189 SQDTLINIKLSKKLSKEILDKIKKLTSPDYIKLIS 223
>gi|50555640|ref|XP_505228.1| YALI0F09966p [Yarrowia lipolytica]
gi|49651098|emb|CAG78035.1| YALI0F09966p [Yarrowia lipolytica]
Length = 511
Score = 41.9 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 33/94 (35%), Gaps = 12/94 (12%)
Query: 10 IKIQEINFDVD--IGRL---MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
+ E+N +V I V+ ++ G+++ V I + NI + +
Sbjct: 421 VNFPEVNLNVVNHAEEHDHVRILYVHKNVPGVLLSVNEIFASH--NIEKQYS--ESRGDI 476
Query: 65 AI---SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
A +D + + ++ EKL +
Sbjct: 477 AYLMADIADVDQADIKTLYEKLEQTPFKISTRLL 510
>gi|269127756|ref|YP_003301126.1| acetolactate synthase small subunit [Thermomonospora curvata DSM
43183]
gi|268312714|gb|ACY99088.1| acetolactate synthase, small subunit [Thermomonospora curvata DSM
43183]
Length = 174
Score = 41.6 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNS 78
+ R + ++ + GI+ V + G NI +G ++ E + + ++ L
Sbjct: 1 MSRHTLSVLVENKPGILARVAALFSRRGFNIDSLAVGTTEHPEISRMTIVVNVEDHPLEQ 60
Query: 79 VLEKLSVNVTIRFV 92
V ++L+ V + +
Sbjct: 61 VTKQLNKLVNVLKI 74
>gi|145346469|ref|XP_001417709.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577937|gb|ABO96002.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 454
Score = 41.6 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 26/77 (33%), Gaps = 5/77 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI--LNSV 79
+CIVN + G + + LG NI + A + + ++ ++
Sbjct: 358 SGARLCIVNKNESGALGEITTFLGTQNCNI--LQQINTSRDSVAYTVIDLETCPEDPGAL 415
Query: 80 LEKL-SVNVTIRFVKQF 95
+ L + + +
Sbjct: 416 QDSLAAACPMVISSRFI 432
>gi|253995558|ref|YP_003047622.1| (p)ppGpp synthetase I SpoT/RelA [Methylotenera mobilis JLW8]
gi|253982237|gb|ACT47095.1| (p)ppGpp synthetase I, SpoT/RelA [Methylotenera mobilis JLW8]
Length = 748
Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 8/85 (9%), Positives = 30/85 (35%), Gaps = 8/85 (9%)
Query: 16 NFDVDIGRLMICIVN-----ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISF 68
+ + + + N A+ G++ + + + G NI + + + + +A
Sbjct: 643 DVEWEPESSRLFKTNLNLTVANQPGMLAQIAAGIADAGSNIDNVSVEEADGSAYANLYFT 702
Query: 69 LCIDGSIL-NSVLEKLSVNVTIRFV 92
+ + + ++ L + +
Sbjct: 703 VQVKNRVHLAELMRGLRKIPDVVRI 727
>gi|29347486|ref|NP_810989.1| acetohydroxyacid synthase small subunit [Bacteroides
thetaiotaomicron VPI-5482]
gi|253570701|ref|ZP_04848109.1| acetohydroxyacid synthase small subunit [Bacteroides sp. 1_1_6]
gi|298385057|ref|ZP_06994616.1| acetolactate synthase, small subunit [Bacteroides sp. 1_1_14]
gi|29339386|gb|AAO77183.1| acetohydroxyacid synthase small subunit [Bacteroides
thetaiotaomicron VPI-5482]
gi|251839650|gb|EES67733.1| acetohydroxyacid synthase small subunit [Bacteroides sp. 1_1_6]
gi|298262201|gb|EFI05066.1| acetolactate synthase, small subunit [Bacteroides sp. 1_1_14]
Length = 187
Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + +I G++ V + INI ++ S + D + V++
Sbjct: 7 YTIIVHSENIAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDTIEKVVK 66
Query: 82 KLSVNVTIRFVKQFE 96
++ + + F
Sbjct: 67 QIEKKIDVIQAHYFT 81
>gi|15606890|ref|NP_214271.1| acetolactate synthase [Aquifex aeolicus VF5]
gi|6225557|sp|O67703|ILVH_AQUAE RecName: Full=Acetolactate synthase small subunit; AltName:
Full=Acetohydroxy-acid synthase small subunit;
Short=AHAS; Short=ALS
gi|2984126|gb|AAC07662.1| acetolactate synthase [Aquifex aeolicus VF5]
Length = 192
Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I + + +G++ + ++ G NI +G + + + + D ++ V++
Sbjct: 28 HIITVKVRNEMGVLARIATLIAGKGYNIEGLSVGETHEKGISRMTIEVIGDDIVIEQVVK 87
Query: 82 KLSVNVTIRFVKQFE 96
+L + V
Sbjct: 88 QLRRLIDTLKVSDLT 102
>gi|117927915|ref|YP_872466.1| acetolactate synthase 3 regulatory subunit [Acidothermus
cellulolyticus 11B]
gi|117648378|gb|ABK52480.1| acetolactate synthase, small subunit [Acidothermus cellulolyticus
11B]
Length = 174
Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNS 78
+ R + ++ + G++ + + G NI +G ++ E + + ++ L
Sbjct: 1 MSRHTLSVLVENKPGVLARIAGLFARRGFNIESLAVGPTEHPELSRMTIVVNVEEHPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 VTKQLNKLVNVIKIVELE 78
>gi|326776600|ref|ZP_08235865.1| homoserine dehydrogenase [Streptomyces cf. griseus XylebKG-1]
gi|326656933|gb|EGE41779.1| homoserine dehydrogenase [Streptomyces cf. griseus XylebKG-1]
Length = 429
Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 10/88 (11%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
V ++ + D G++ V + E G++I + + A +
Sbjct: 338 RLPVSPMGEVVTRYHISLDVADKPGVLAQVATVFAEQGVSIDT--VRQQGKDGEASLVVV 395
Query: 71 IDGSILNSV---LEKLSVNVTIRFVKQF 95
+ ++ +E L T+R V
Sbjct: 396 THRAPDAALSGTVEALRKLDTVRGVASI 423
>gi|291447748|ref|ZP_06587138.1| homoserine dehydrogenase [Streptomyces roseosporus NRRL 15998]
gi|291350695|gb|EFE77599.1| homoserine dehydrogenase [Streptomyces roseosporus NRRL 15998]
Length = 429
Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 10/88 (11%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
V ++ + D G++ V + E G++I + + A +
Sbjct: 338 RLPVSPMGEVVTRYHISLDVADKPGVLAQVATVFAEQGVSIDT--VRQQGKDGEASLVVV 395
Query: 71 IDGSILNSV---LEKLSVNVTIRFVKQF 95
+ ++ +E L T+R V
Sbjct: 396 THRAPDAALSGTVEALRKLDTVRGVASI 423
>gi|239944280|ref|ZP_04696217.1| homoserine dehydrogenase [Streptomyces roseosporus NRRL 15998]
Length = 430
Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 10/88 (11%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
V ++ + D G++ V + E G++I + + A +
Sbjct: 339 RLPVSPMGEVVTRYHISLDVADKPGVLAQVATVFAEQGVSIDT--VRQQGKDGEASLVVV 396
Query: 71 IDGSILNSV---LEKLSVNVTIRFVKQF 95
+ ++ +E L T+R V
Sbjct: 397 THRAPDAALSGTVEALRKLDTVRGVASI 424
>gi|182435975|ref|YP_001823694.1| homoserine dehydrogenase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178464491|dbj|BAG19011.1| putative homoserine dehydrogenase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 430
Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 10/88 (11%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
V ++ + D G++ V + E G++I + + A +
Sbjct: 339 RLPVSPMGEVVTRYHISLDVADKPGVLAQVATVFAEQGVSIDT--VRQQGKDGEASLVVV 396
Query: 71 IDGSILNSV---LEKLSVNVTIRFVKQF 95
+ ++ +E L T+R V
Sbjct: 397 THRAPDAALSGTVEALRKLDTVRGVASI 424
>gi|317037003|ref|XP_001398464.2| D-3-phosphoglycerate dehydrogenase 1 [Aspergillus niger CBS 513.88]
Length = 474
Score = 41.6 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 29/79 (36%), Gaps = 7/79 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSIL 76
+ + ++ ++ G++ V ILG++ ++ + A +D + +
Sbjct: 399 EPDHARVIFIHQNVPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMADISSVDNTTI 454
Query: 77 NSVLEKLSVNVTIRFVKQF 95
+ E+L + +
Sbjct: 455 KDLYERLESLGSRIMTRIL 473
>gi|303327509|ref|ZP_07357950.1| GTP diphosphokinase [Desulfovibrio sp. 3_1_syn3]
gi|302862449|gb|EFL85382.1| GTP diphosphokinase [Desulfovibrio sp. 3_1_syn3]
Length = 719
Score = 41.6 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKL 83
I I+ ++ G++ V +L + +NI ++ + F ++E +
Sbjct: 644 IFIIAKNVQGVLAEVAQVLAKNNVNITGLNMDNMVDGRAKLRFTVEVRDATQLYQLIEAI 703
Query: 84 SVNVTIRFV 92
+I V
Sbjct: 704 RALPSILEV 712
>gi|125974421|ref|YP_001038331.1| MgtC/SapB transporter [Clostridium thermocellum ATCC 27405]
gi|256005866|ref|ZP_05430814.1| MgtC/SapB transporter [Clostridium thermocellum DSM 2360]
gi|281418947|ref|ZP_06249965.1| MgtC/SapB transporter [Clostridium thermocellum JW20]
gi|125714646|gb|ABN53138.1| MgtC/SapB transporter [Clostridium thermocellum ATCC 27405]
gi|255990170|gb|EEU00304.1| MgtC/SapB transporter [Clostridium thermocellum DSM 2360]
gi|281407404|gb|EFB37664.1| MgtC/SapB transporter [Clostridium thermocellum JW20]
gi|316941560|gb|ADU75594.1| MgtC/SapB transporter [Clostridium thermocellum DSM 1313]
Length = 232
Score = 41.6 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NSVLE 81
+ I D+ G + +G I G++ I I + + E + + +++
Sbjct: 159 IFYIQTEDLPGQIGTIGCIFGKHNITIRNIEFINEKKDEEVLIKFAVKMPSDMSKEKIMD 218
Query: 82 KLSVNVTIRFV 92
+L ++ V
Sbjct: 219 ELQRVNGVKKV 229
>gi|242399891|ref|YP_002995316.1| Regulator of amino acid metabolism, putative, containing act domain
[Thermococcus sibiricus MM 739]
gi|242266285|gb|ACS90967.1| Regulator of amino acid metabolism, putative, containing act domain
[Thermococcus sibiricus MM 739]
Length = 166
Score = 41.6 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 12/97 (12%)
Query: 8 RFIKIQEINFDVDIGRLM---------ICIVNADIL---GIVVFVGNILGEYGINIAHFH 55
+ +++EI +++ M I GI+ V + + + GINI
Sbjct: 67 KIPELKEIYVNLEPTVHMKFVGRHVGYGVIEIEPEPRAIGILAKVASKIADRGINIIQVV 126
Query: 56 LGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ A + + I ++ +LS ++ +
Sbjct: 127 AEDPELYPEATLTIITEKPIPGELINELSKLEGVKRI 163
>gi|149910149|ref|ZP_01898795.1| (p)ppGpp synthetase I [Moritella sp. PE36]
gi|149806735|gb|EDM66699.1| (p)ppGpp synthetase I [Moritella sp. PE36]
Length = 748
Score = 41.6 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 9/83 (10%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 18 DVDIG-RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL 76
D G + + + +D G++ + I I++ + + A + I+ +
Sbjct: 666 DFSGGYGVTLVVHASDRSGLLRDLTTIFANDRIHVVGMNTRTDSKQQTATLEINIELYNI 725
Query: 77 NSV---LEKLSVNVTIRFVKQFE 96
+++ + ++S + + ++ +
Sbjct: 726 DTLSHLINRMSQVKGVIYARRLK 748
>gi|119498643|ref|XP_001266079.1| D-3-phosphoglycerate dehydrogenase [Neosartorya fischeri NRRL 181]
gi|119414243|gb|EAW24182.1| D-3-phosphoglycerate dehydrogenase [Neosartorya fischeri NRRL 181]
Length = 472
Score = 41.6 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 8/79 (10%), Positives = 29/79 (36%), Gaps = 7/79 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSIL 76
+ + ++ ++ G++ V +LG++ ++ + A +D + +
Sbjct: 397 EPNHARVIYIHHNVPGVLRKVNEVLGDHNVD----KQMTDSRGDVAYLMADISNVDNATI 452
Query: 77 NSVLEKLSVNVTIRFVKQF 95
+ E+L + +
Sbjct: 453 KELYERLESLSSRIMTRIL 471
>gi|302558387|ref|ZP_07310729.1| homoserine dehydrogenase [Streptomyces griseoflavus Tu4000]
gi|302476005|gb|EFL39098.1| homoserine dehydrogenase [Streptomyces griseoflavus Tu4000]
Length = 429
Score = 41.6 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEKLSVNVT 88
D G++ V + E+G++I + + A + + + V+E L T
Sbjct: 359 DKPGVLAQVATVFAEHGVSIDT--VRQQGKDGEASLVVVTHRASDAALSGVVEALRKLDT 416
Query: 89 IRFVKQF 95
+R V
Sbjct: 417 VRGVASI 423
>gi|290476631|ref|YP_003469536.1| (p)ppGpp synthetase I [Xenorhabdus bovienii SS-2004]
gi|289175969|emb|CBJ82772.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Xenorhabdus bovienii
SS-2004]
Length = 745
Score = 41.6 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 652 RIV--DAVWGENYSSGYSLVVRVLANDRSGLLRDITTILANEKVNVLGVSSRSDVKQQLA 709
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 710 TIDMNIEIYNLQVLGRVLAKLNQLSDVIEARRLH 743
>gi|251772536|gb|EES53102.1| GTP pyrophosphokinase [Leptospirillum ferrodiazotrophum]
Length = 745
Score = 41.6 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL- 76
D + + D G++ V + E G NI H + +++ + F G++
Sbjct: 657 DAIFDVH-LRVSMEDKPGMLAAVSAAISERGANITHAEVKQAKHRMGVLDFTVTVGNLSH 715
Query: 77 -NSVLEKLSVNVTIRFVKQFE 96
++ ++ + V++ +
Sbjct: 716 LQEIMARVQHVKGVVRVQRVK 736
>gi|117926770|ref|YP_867387.1| amino acid-binding ACT domain-containing protein [Magnetococcus sp.
MC-1]
gi|117610526|gb|ABK45981.1| amino acid-binding ACT domain protein [Magnetococcus sp. MC-1]
Length = 181
Score = 41.6 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS---ILNS 78
+I ++ AD GIV V +L + +NI H + I + I+ +
Sbjct: 96 ESFLINVLGADKPGIVYHVTQLLADKAVNIVDMHTHTGGAVGRPIYIINIEVEGVKQPEA 155
Query: 79 VLEKLSVNVTIRFV 92
+ L V
Sbjct: 156 LRTALKELAAQLQV 169
>gi|318060724|ref|ZP_07979447.1| homoserine dehydrogenase [Streptomyces sp. SA3_actG]
Length = 409
Score = 41.6 bits (97), Expect = 0.036, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNV 87
D G++ V + E G++I GR + A + + ++ +E L
Sbjct: 336 DKPGVLAQVATVFAEQGVSIDTVRQQGRGDGSGEASLVVVTHRAPDAALSSTVEALRKLD 395
Query: 88 TIRFVKQF 95
T+R V
Sbjct: 396 TVRGVASI 403
>gi|302521928|ref|ZP_07274270.1| homoserine dehydrogenase [Streptomyces sp. SPB78]
gi|302430823|gb|EFL02639.1| homoserine dehydrogenase [Streptomyces sp. SPB78]
Length = 432
Score = 41.6 bits (97), Expect = 0.036, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNV 87
D G++ V + E G++I GR + A + + ++ +E L
Sbjct: 359 DKPGVLAQVATVFAEQGVSIDTVRQQGRGDGSGEASLVVVTHRAPDAALSSTVEALRKLD 418
Query: 88 TIRFVKQF 95
T+R V
Sbjct: 419 TVRGVASI 426
>gi|307545602|ref|YP_003898081.1| GTP pyrophosphokinase [Halomonas elongata DSM 2581]
gi|307217626|emb|CBV42896.1| GTP pyrophosphokinase [Halomonas elongata DSM 2581]
Length = 761
Score = 41.6 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CID 72
D++ + D G++ V +L +N+ + A + +D
Sbjct: 666 YPVDME-------VQAWDRAGLLRDVTAVLSHDRVNVLSVNTLTDTDDGIARMAITVEVD 718
Query: 73 G-SILNSVLEKLSVNVTIRFVKQFE 96
G L + ++ + V++
Sbjct: 719 GLETLGRLFSRIQQLPNVIEVRRLR 743
>gi|209884971|ref|YP_002288828.1| GTP pyrophosphokinase [Oligotropha carboxidovorans OM5]
gi|209873167|gb|ACI92963.1| GTP pyrophosphokinase [Oligotropha carboxidovorans OM5]
Length = 754
Score = 41.6 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ + N + G + + ++ E+ NI + + R + L ID + + L+ L+
Sbjct: 680 RLHVQNVNEPGSLAQIAGVIAEHDGNIDNIGMSRRSPD---FTDLIIDLEVYD--LKHLN 734
Query: 85 VNVTIRFVKQF 95
+ K
Sbjct: 735 GIINQLRAKAV 745
>gi|16030067|emb|CAC85208.1| homoserine dehydrogenase [Streptomyces sp. NRRL 5331]
Length = 430
Score = 41.6 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 10/88 (11%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
V ++ + D G++ V + E G++I + + A +
Sbjct: 339 RLPVSPMGEVVTRYHISLDVADKPGVLAQVATVFAEQGVSIDT--VRQQGKDGEASLVVV 396
Query: 71 IDGSILNSV---LEKLSVNVTIRFVKQF 95
+ ++ +E L T+R V
Sbjct: 397 THRAPDAALSGTVEALRKLDTVRGVASI 424
>gi|213580584|ref|ZP_03362410.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 194
Score = 41.6 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 101 RIVE--AVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIA 158
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 159 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 192
>gi|114566874|ref|YP_754028.1| prephenate dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337809|gb|ABI68657.1| prephenate dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 334
Score = 41.6 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
KI + + I + D GI+ +G ILG GINI + R + + L
Sbjct: 251 KIPRVRRGLIPDFCDIICIVPDQPGIIGALGQILGHEGINIVDIEILRVREGDGGTIRLG 310
Query: 71 I 71
+
Sbjct: 311 V 311
>gi|327539418|gb|EGF26034.1| acetolactate synthase small subunit [Rhodopirellula baltica WH47]
Length = 229
Score = 41.6 bits (97), Expect = 0.039, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSV 79
R ++ + ++ G++ + +L G NI +G ++ + + D +L+ V
Sbjct: 56 QRHLLSALVQNVPGVLAHISGMLASRGYNIDSLAVGETEDPTLSRMTFVVVGDDQVLDQV 115
Query: 80 LEKLSVNVTIRFVKQFEFNVD 100
++L + V+ + + +
Sbjct: 116 RKQLEKI--VTVVRVLDISSN 134
>gi|259482914|tpe|CBF77844.1| TPA: 3-phosphoglycerate dehydrogenase, hypothetical (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 475
Score = 41.6 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 29/79 (36%), Gaps = 7/79 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSIL 76
+ + ++ ++ G++ V ILG++ ++ + A +D + +
Sbjct: 400 EPDHARVIYIHHNVPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMADISNVDNATI 455
Query: 77 NSVLEKLSVNVTIRFVKQF 95
+ E+L + +
Sbjct: 456 KDLYERLESLSSRIMTRIL 474
>gi|212694478|ref|ZP_03302606.1| hypothetical protein BACDOR_04006 [Bacteroides dorei DSM 17855]
gi|237711183|ref|ZP_04541664.1| acetohydroxyacid synthase small subunit [Bacteroides sp.
9_1_42FAA]
gi|237727548|ref|ZP_04558029.1| acetohydroxyacid synthase small subunit [Bacteroides sp. D4]
gi|265750775|ref|ZP_06086838.1| acetolactate synthase, small subunit [Bacteroides sp. 3_1_33FAA]
gi|212662979|gb|EEB23553.1| hypothetical protein BACDOR_04006 [Bacteroides dorei DSM 17855]
gi|229434404|gb|EEO44481.1| acetohydroxyacid synthase small subunit [Bacteroides dorei
5_1_36/D4]
gi|229455027|gb|EEO60748.1| acetohydroxyacid synthase small subunit [Bacteroides sp.
9_1_42FAA]
gi|263237671|gb|EEZ23121.1| acetolactate synthase, small subunit [Bacteroides sp. 3_1_33FAA]
Length = 184
Score = 41.6 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
+ + + +I G++ + + INI ++ S + ++ V++
Sbjct: 6 YTLIVHSENIAGLLNQITAVFTRRQINIESLNVSASSIKGVHKYTITAWTTQDVIEKVVK 65
Query: 82 KLSVNVTIRFVKQFE 96
++ + + F
Sbjct: 66 QIEKKIDVLQAHYFT 80
>gi|204789670|gb|ACI02046.1| hypothetical protein [uncultured bacterium]
Length = 742
Score = 41.6 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEK 82
I ++ +D G+++ + +L E +N+ + GR A++ L + S V+++
Sbjct: 669 ITMLISDKPGMLMAITRVLTEKNVNVISVN-GRPAKNGTAVTSLSFETSGKEELRNVIDR 727
Query: 83 LSVNVTIRFV 92
L + +
Sbjct: 728 LKSIDGVIDI 737
>gi|75676113|ref|YP_318534.1| RelA/SpoT protein [Nitrobacter winogradskyi Nb-255]
gi|74420983|gb|ABA05182.1| RelA/SpoT protein [Nitrobacter winogradskyi Nb-255]
Length = 774
Score = 41.6 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEK 82
I + + + G + V ++ E+ NI + + R ++ L + D L++++ +
Sbjct: 700 RIVLDSLNEPGSLAQVATVIAEHDGNIDNISMTRRSPDFTEMTIDLEVYDLKHLSAIIAQ 759
Query: 83 LSVNVTIRFVKQFE 96
L + +++
Sbjct: 760 LRAKDVVARIERVN 773
>gi|303319347|ref|XP_003069673.1| D-3-phosphoglycerate dehydrogenase 1 , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109359|gb|EER27528.1| D-3-phosphoglycerate dehydrogenase 1 , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320040888|gb|EFW22821.1| D-3-phosphoglycerate dehydrogenase [Coccidioides posadasii str.
Silveira]
Length = 480
Score = 41.6 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 6/79 (7%), Positives = 24/79 (30%), Gaps = 7/79 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--- 76
+ + ++ ++ G++ V +L + ++ + A I
Sbjct: 405 EPNHARVIFIHRNVPGVLRKVNEVLANHNVD----KQMTDSRGDVAYLMADISDVNSSDI 460
Query: 77 NSVLEKLSVNVTIRFVKQF 95
+ ++L + +
Sbjct: 461 KELYQQLESLSSRIMTRVL 479
>gi|94986614|ref|YP_594547.1| guanosine polyphosphate pyrophosphohydrolases/synthetases [Lawsonia
intracellularis PHE/MN1-00]
gi|94730863|emb|CAJ54226.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases [Lawsonia
intracellularis PHE/MN1-00]
Length = 731
Score = 41.6 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 30/89 (33%), Gaps = 6/89 (6%)
Query: 8 RFIKI--QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + I +V +++G++ + + +N+ + R
Sbjct: 638 RLVSVQWDGH--ETVPFPARIYLVGINVVGLLADIALVFKAENVNVESCIVQRLIDGRSE 695
Query: 66 ISFLCIDGSILN--SVLEKLSVNVTIRFV 92
+ I + V++KL I V
Sbjct: 696 MDATIGVRDIAHLYQVIDKLRQLPNIVEV 724
>gi|225847917|ref|YP_002728080.1| acetolactate synthase, small subunit [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225644449|gb|ACN99499.1| acetolactate synthase, small subunit [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 188
Score = 41.6 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSI 75
+ IGR +I + G++ + + G NI +GR+ A + + D +
Sbjct: 14 EKKIGRHVITVKVQHNFGVLARITGLFAGRGYNIESLTVGRTHEPHIARITIVVEGDERV 73
Query: 76 LNSVLEKLSVNVTIRFVKQFE 96
+ ++++L + V+
Sbjct: 74 IEQIIKQLRKLIETLRVRDIT 94
>gi|237809484|ref|YP_002893924.1| (p)ppGpp synthetase I, SpoT/RelA [Tolumonas auensis DSM 9187]
gi|237501745|gb|ACQ94338.1| (p)ppGpp synthetase I, SpoT/RelA [Tolumonas auensis DSM 9187]
Length = 743
Score = 41.6 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 11/95 (11%)
Query: 8 RFIKIQEINFDVDIGRLMICIVN--ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R I + + G + + D G++ + I+ IN+ + + A
Sbjct: 653 RI--IDAVWGENYSGGYALTVRITANDRSGLLRDITTIIANEKINVLGMRSRSNVKQQTA 710
Query: 66 ISFLCIDGSI-----LNSVLEKLSVNVTIRFVKQF 95
+ ID I LN +L K++ + K+
Sbjct: 711 --DIDIDMEIYNIETLNRMLAKINQMNDVVSAKRL 743
>gi|297202383|ref|ZP_06919780.1| homoserine dehydrogenase [Streptomyces sviceus ATCC 29083]
gi|197710098|gb|EDY54132.1| homoserine dehydrogenase [Streptomyces sviceus ATCC 29083]
Length = 429
Score = 41.2 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNVT 88
D G++ V + E+G++I + + A + + ++ +E L T
Sbjct: 359 DKPGVLAQVATVFAEHGVSIDT--VRQQGKDGEASLVVVTHRASDAALGGTVEALRKLDT 416
Query: 89 IRFVKQF 95
+R V
Sbjct: 417 VRGVASI 423
>gi|291278481|ref|YP_003495316.1| GTP pyrophosphokinase [Deferribacter desulfuricans SSM1]
gi|290753183|dbj|BAI79560.1| GTP pyrophosphokinase [Deferribacter desulfuricans SSM1]
Length = 710
Score = 41.2 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLSVNV 87
D GI+ + N++ + GINI F R A + D + LN ++ K+
Sbjct: 644 EDRPGILSEIANVIKDMGINIVEFS-ARPIMKGKARQVFSVEVNDKNQLNRLITKIKSIP 702
Query: 88 TIRFVKQF 95
+ +K
Sbjct: 703 GVENIKIL 710
>gi|325968373|ref|YP_004244565.1| hypothetical protein VMUT_0853 [Vulcanisaeta moutnovskia 768-28]
gi|323707576|gb|ADY01063.1| hypothetical protein VMUT_0853 [Vulcanisaeta moutnovskia 768-28]
Length = 198
Score = 41.2 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
++ ++ D G++ V ++ +NI + + + IDG + + ++ +
Sbjct: 3 WLLLSISRDRPGLLNDVTGLIKARNLNIKNIV------GNNYAVLIEIDGEVSDELINAV 56
Query: 84 SVNVTIRFVKQF 95
S I V
Sbjct: 57 SNVNGINTVNVI 68
>gi|257081436|ref|ZP_05575797.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|256989466|gb|EEU76768.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
Length = 219
Score = 41.2 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 3 SDGKPRF--IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G I++ N + ++ ++N + + + L + NI + R
Sbjct: 128 GGGTIEVKYIELDGFNVQLHGPLPILLVINQEEQAMQA-FKDTLQKN--NIQVNAVSRYV 184
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ +D + ++SV E+L +
Sbjct: 185 EGNQILFIFDLDSAPISSVKEQLFSLDDTSKIILL 219
>gi|256960728|ref|ZP_05564899.1| L-serine dehydratase [Enterococcus faecalis Merz96]
gi|256951224|gb|EEU67856.1| L-serine dehydratase [Enterococcus faecalis Merz96]
Length = 219
Score = 41.2 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 3 SDGKPRF--IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G I++ N + ++ ++N + + + L + NI + R
Sbjct: 128 GGGTIEVKYIELDGFNVQLHGPLPILLVINQEEQAMQA-FKDTLQKN--NIQVNAVSRYV 184
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ +D + ++SV E+L +
Sbjct: 185 EGNQILFIFDLDSAPISSVKEQLFSLDDTSKIILL 219
>gi|254282396|ref|ZP_04957364.1| glycine cleavage system regulatory protein [gamma proteobacterium
NOR51-B]
gi|219678599|gb|EED34948.1| glycine cleavage system regulatory protein [gamma proteobacterium
NOR51-B]
Length = 175
Score = 41.2 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS--TEHAISFLCIDGSILNS-VLEK 82
+ + D GIV + L + GIN++ G + T + I+ + + LE
Sbjct: 92 LSVTGPDRPGIVRGISKALADAGINVSRMTSGVESAPWTGETLFLAEIEATAPENYSLEG 151
Query: 83 LS-VNVTIRFVKQFEFNVD 100
+ I + +++
Sbjct: 152 IQTTLDEIADAMTLDIDIE 170
>gi|326506480|dbj|BAJ86558.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 41.2 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D ++ + ++L E G+NI H+ + + + +DG +
Sbjct: 162 HEIIFSSQDKPKLLGRLTSLLSEVGLNIQEAHVYSTTDS-FCLDVFVVDGWKTEETEALI 220
Query: 84 SVNVTIR 90
Sbjct: 221 VTIEDTL 227
>gi|6647734|sp|O52177|RELA_MYXXA RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|2736190|gb|AAB97677.1| (p)ppGpp synthetase [Myxococcus xanthus]
Length = 757
Score = 41.2 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D G++ + N + G+NI A+ + + D L ++ + +
Sbjct: 692 DRPGLLADITNTFSKKGVNISQANCRATGDDRAVNTFEVIISDLKQLTDLMRTIERLQGV 751
Query: 90 RFVKQF 95
V++
Sbjct: 752 YSVERI 757
>gi|320094052|ref|ZP_08025872.1| acetolactate synthase small subunit [Actinomyces sp. oral taxon
178 str. F0338]
gi|319979013|gb|EFW10536.1| acetolactate synthase small subunit [Actinomyces sp. oral taxon
178 str. F0338]
Length = 170
Score = 41.2 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSV 79
R + ++ + G++ V + NI +G ++ E + + D + L V
Sbjct: 3 NRHTLAVLVENKPGVLTRVAALFARRAFNIKSLAVGETEHPEISRMTIIVDADEAPLEQV 62
Query: 80 LEKLSVNVTIRFV 92
+++L+ V + V
Sbjct: 63 VKQLNKLVNVLKV 75
>gi|326491489|dbj|BAJ94222.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 41.2 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D ++ + ++L E G+NI H+ + + + +DG +
Sbjct: 162 HEIIFSSQDKPKLLGRLTSLLSEVGLNIQEAHVYSTTDS-FCLDVFVVDGWKTEETEALI 220
Query: 84 SVNVTIR 90
Sbjct: 221 VTIEDTL 227
>gi|308375954|ref|ZP_07445648.2| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu007]
gi|308344694|gb|EFP33545.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu007]
Length = 169
Score = 41.2 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
+ + ++ D G++ V + G NI +G ++ + + + + + + L
Sbjct: 2 MSPKTHTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATECKDRSRMTIVVSAEDTPL 61
Query: 77 NSVLEKLSVNVTIRFV 92
+ ++L+ + + +
Sbjct: 62 EQITKQLNKLINVIKI 77
>gi|293192785|ref|ZP_06609680.1| prephenate dehydrogenase [Actinomyces odontolyticus F0309]
gi|292820032|gb|EFF79030.1| prephenate dehydrogenase [Actinomyces odontolyticus F0309]
Length = 399
Score = 41.2 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
++ D G + + + LGE GINI L S + ++ + ID ++++ + L
Sbjct: 334 VLIPDEPGALGRLFSELGEAGINIEDLVLEHSAGAQAGVARVMIDPAVVDRAVADLQQ 391
>gi|15610139|ref|NP_217518.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis H37Rv]
gi|15842560|ref|NP_337597.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis CDC1551]
gi|31794179|ref|NP_856672.1| acetolactate synthase 3 regulatory subunit [Mycobacterium bovis
AF2122/97]
gi|148662853|ref|YP_001284376.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis H37Ra]
gi|148824192|ref|YP_001288946.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis F11]
gi|167967829|ref|ZP_02550106.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis H37Ra]
gi|215404989|ref|ZP_03417170.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis 02_1987]
gi|215412849|ref|ZP_03421561.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis 94_M4241A]
gi|215428456|ref|ZP_03426375.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis T92]
gi|215431956|ref|ZP_03429875.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis EAS054]
gi|215447274|ref|ZP_03434026.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis T85]
gi|218754765|ref|ZP_03533561.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis GM 1503]
gi|219559036|ref|ZP_03538112.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis T17]
gi|224991376|ref|YP_002646065.1| acetolactate synthase 3 regulatory subunit [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253797903|ref|YP_003030904.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis KZN 1435]
gi|254233085|ref|ZP_04926412.1| acetolactate synthase (small subunit) ilvN [Mycobacterium
tuberculosis C]
gi|254365637|ref|ZP_04981682.1| acetolactate synthase (small subunit) ilvN [Mycobacterium
tuberculosis str. Haarlem]
gi|260188028|ref|ZP_05765502.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis CPHL_A]
gi|260202144|ref|ZP_05769635.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis T46]
gi|260206328|ref|ZP_05773819.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis K85]
gi|289444568|ref|ZP_06434312.1| acetolactate synthase, small subunit [Mycobacterium tuberculosis
T46]
gi|289448676|ref|ZP_06438420.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis CPHL_A]
gi|289553208|ref|ZP_06442418.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis KZN 605]
gi|289571203|ref|ZP_06451430.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis T17]
gi|289575710|ref|ZP_06455937.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis K85]
gi|289746808|ref|ZP_06506186.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis 02_1987]
gi|289751681|ref|ZP_06511059.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis T92]
gi|289755120|ref|ZP_06514498.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis EAS054]
gi|289759129|ref|ZP_06518507.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis T85]
gi|289763183|ref|ZP_06522561.1| acetolactate synthase (small subunit) ilvN [Mycobacterium
tuberculosis GM 1503]
gi|294993908|ref|ZP_06799599.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis 210]
gi|297635629|ref|ZP_06953409.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis KZN 4207]
gi|297732627|ref|ZP_06961745.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis KZN R506]
gi|298526473|ref|ZP_07013882.1| acetolactate synthase, small subunit [Mycobacterium tuberculosis
94_M4241A]
gi|306777297|ref|ZP_07415634.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu001]
gi|306781208|ref|ZP_07419545.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu002]
gi|306785847|ref|ZP_07424169.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu003]
gi|306789887|ref|ZP_07428209.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu004]
gi|306794698|ref|ZP_07433000.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu005]
gi|306798941|ref|ZP_07437243.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu006]
gi|306804786|ref|ZP_07441454.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu008]
gi|306969078|ref|ZP_07481739.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu009]
gi|306973415|ref|ZP_07486076.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu010]
gi|307081123|ref|ZP_07490293.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu011]
gi|307085728|ref|ZP_07494841.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu012]
gi|313659959|ref|ZP_07816839.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis KZN V2475]
gi|54037422|sp|P65162|ILVH_MYCBO RecName: Full=Acetolactate synthase small subunit; AltName:
Full=Acetohydroxy-acid synthase small subunit;
Short=AHAS; Short=ALS
gi|54041388|sp|P65161|ILVH_MYCTU RecName: Full=Acetolactate synthase small subunit; AltName:
Full=Acetohydroxy-acid synthase small subunit;
Short=AHAS; Short=ALS
gi|2791599|emb|CAA16087.1| PROBABLE ACETOLACTATE SYNTHASE (SMALL SUBUNIT) ILVN
(ACETOHYDROXY-ACID SYNTHASE) (AHAS) (ALS)
[Mycobacterium tuberculosis H37Rv]
gi|13882872|gb|AAK47411.1| acetolactate synthase, small subunit [Mycobacterium tuberculosis
CDC1551]
gi|31619774|emb|CAD96714.1| PROBABLE ACETOLACTATE SYNTHASE (SMALL SUBUNIT) ILVN
(ACETOHYDROXY-ACID SYNTHASE) (AHAS) (ALS)
[Mycobacterium bovis AF2122/97]
gi|124602144|gb|EAY61154.1| acetolactate synthase (small subunit) ilvN [Mycobacterium
tuberculosis C]
gi|134151150|gb|EBA43195.1| acetolactate synthase (small subunit) ilvN [Mycobacterium
tuberculosis str. Haarlem]
gi|148507005|gb|ABQ74814.1| acetolactate synthase I small subunit [Mycobacterium tuberculosis
H37Ra]
gi|148722719|gb|ABR07344.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis F11]
gi|224774491|dbj|BAH27297.1| acetolactate synthase 3 regulatory subunit [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253319406|gb|ACT24009.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis KZN 1435]
gi|289417487|gb|EFD14727.1| acetolactate synthase, small subunit [Mycobacterium tuberculosis
T46]
gi|289421634|gb|EFD18835.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis CPHL_A]
gi|289437840|gb|EFD20333.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis KZN 605]
gi|289540141|gb|EFD44719.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis K85]
gi|289544957|gb|EFD48605.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis T17]
gi|289687336|gb|EFD54824.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis 02_1987]
gi|289692268|gb|EFD59697.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis T92]
gi|289695707|gb|EFD63136.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
tuberculosis EAS054]
gi|289710689|gb|EFD74705.1| acetolactate synthase (small subunit) ilvN [Mycobacterium
tuberculosis GM 1503]
gi|289714693|gb|EFD78705.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis T85]
gi|298496267|gb|EFI31561.1| acetolactate synthase, small subunit [Mycobacterium tuberculosis
94_M4241A]
gi|308214346|gb|EFO73745.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu001]
gi|308325990|gb|EFP14841.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu002]
gi|308329520|gb|EFP18371.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu003]
gi|308333659|gb|EFP22510.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu004]
gi|308337017|gb|EFP25868.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu005]
gi|308340830|gb|EFP29681.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu006]
gi|308348644|gb|EFP37495.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu008]
gi|308353369|gb|EFP42220.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu009]
gi|308357214|gb|EFP46065.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu010]
gi|308361167|gb|EFP50018.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu011]
gi|308364760|gb|EFP53611.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis SUMu012]
gi|323718383|gb|EGB27557.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis CDC1551A]
gi|326904616|gb|EGE51549.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis W-148]
gi|328457680|gb|AEB03103.1| acetolactate synthase small subunit ilvN [Mycobacterium
tuberculosis KZN 4207]
Length = 168
Score = 41.2 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
+ + ++ D G++ V + G NI +G ++ + + + + + + L
Sbjct: 1 MSPKTHTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATECKDRSRMTIVVSAEDTPL 60
Query: 77 NSVLEKLSVNVTIRFV 92
+ ++L+ + + +
Sbjct: 61 EQITKQLNKLINVIKI 76
>gi|300709430|ref|YP_003735244.1| hypothetical protein HacjB3_00295 [Halalkalicoccus jeotgali B3]
gi|299123113|gb|ADJ13452.1| hypothetical protein HacjB3_00295 [Halalkalicoccus jeotgali B3]
Length = 167
Score = 41.2 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 35 GIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQ 94
GIV V +L + GI+I + T+ ++ D + VL +L FV++
Sbjct: 107 GIVAAVTGLLADNGISIRQTVSEDPEFTDEPRLYIVTDEPVPGDVLNELRELP---FVRK 163
Query: 95 FEF 97
E
Sbjct: 164 LEL 166
>gi|217074650|gb|ACJ85685.1| unknown [Medicago truncatula]
Length = 538
Score = 41.2 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I D ++ + +ILGE G+NI H + ++ ++G E+L
Sbjct: 181 HEITFSTIDKPKLLSQLTSILGEIGLNIQEAHAFSTSD-GFSLDVFVVEGWPNEET-EEL 238
Query: 84 SVN--VTIRFVK 93
I VK
Sbjct: 239 KGVLEKEILKVK 250
>gi|148656410|ref|YP_001276615.1| malate dehydrogenase [Roseiflexus sp. RS-1]
gi|148568520|gb|ABQ90665.1| Malate dehydrogenase (oxaloacetate-decarboxylating) [Roseiflexus
sp. RS-1]
Length = 474
Score = 41.2 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 8/68 (11%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCIDGSI-LNSVLEK 82
I + G++ + +GE G NI + R + + + + ++ +
Sbjct: 14 TIRCQIENRPGMLGTIATAIGENGGNIGAIDIVRVDRKHIVRDITIRVQDELHGDRIVRR 73
Query: 83 LSVNVTIR 90
++ +
Sbjct: 74 INAIPGVV 81
>gi|116750402|ref|YP_847089.1| acetolactate synthase small subunit [Syntrophobacter fumaroxidans
MPOB]
gi|116750444|ref|YP_847131.1| acetolactate synthase small subunit [Syntrophobacter fumaroxidans
MPOB]
gi|116699466|gb|ABK18654.1| acetolactate synthase, small subunit [Syntrophobacter
fumaroxidans MPOB]
gi|116699508|gb|ABK18696.1| acetolactate synthase, small subunit [Syntrophobacter
fumaroxidans MPOB]
Length = 172
Score = 41.2 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +GR++ + + + + D + V +
Sbjct: 3 HTLSVLVENSPGVLTRVAGLFARRGFNIDSLAVGRTERNDVSRMTIVVEGDHHYIEQVTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + +
Sbjct: 63 QLHKLIDVIKISDIT 77
>gi|182679397|ref|YP_001833543.1| (p)ppGpp synthetase I, SpoT/RelA [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182635280|gb|ACB96054.1| (p)ppGpp synthetase I, SpoT/RelA [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 737
Score = 41.2 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAH--FHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ + G + + ++GE G NI + + E I D LN+++++L
Sbjct: 666 VTAINEPGTLGTIATVIGEAGANIDNVVMKAISTDFREIIIDVEVNDLKHLNAIMQQLRA 725
Query: 86 NVTIRFVKQFE 96
+ V++
Sbjct: 726 RPVVHQVERVN 736
>gi|149202131|ref|ZP_01879104.1| homoserine dehydrogenase [Roseovarius sp. TM1035]
gi|149144229|gb|EDM32260.1| homoserine dehydrogenase [Roseovarius sp. TM1035]
Length = 428
Score = 41.2 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 4/78 (5%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ + D G + V +LGE GI+I R + L +
Sbjct: 344 ATPAPYYMRMSLIDKPGALAKVATLLGEAGISIDRMRQYRHDA--TTAPVLIVTHKTTRD 401
Query: 79 VLEKLSVNVTIRFVKQFE 96
L+ I +
Sbjct: 402 ALDT--ALTGISRLDVLH 417
>gi|134298160|ref|YP_001111656.1| acetolactate synthase 3 regulatory subunit [Desulfotomaculum
reducens MI-1]
gi|134050860|gb|ABO48831.1| acetolactate synthase, small subunit [Desulfotomaculum reducens
MI-1]
Length = 170
Score = 41.2 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVL 80
+ ++ + G++ V + G NI +GR+ + + + D +L V
Sbjct: 2 YHTLAVLVENSPGVLARVAGLFSRRGYNIDSLAVGRTDDPAISRMTIVVEGDERVLEQVS 61
Query: 81 EKLSVNVTIRFVKQFE 96
++L V + +
Sbjct: 62 KQLHKLVDVIKINDIT 77
>gi|300113863|ref|YP_003760438.1| (p)ppGpp synthetase I [Nitrosococcus watsonii C-113]
gi|299539800|gb|ADJ28117.1| (p)ppGpp synthetase I, SpoT/RelA [Nitrosococcus watsonii C-113]
Length = 714
Score = 41.2 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 12/92 (13%)
Query: 17 FDVDIGRLM-------ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+V M I I D G++ + +L + NI + +S+ A L
Sbjct: 622 VEVAWRHPMGEAHSMDISIQAEDRKGLLQDITRLLAQTDTNILAINTVSDRSSGQAHMRL 681
Query: 70 CI---DGSILNSVLEKLSVNVTIRFVKQFEFN 98
I D LNS+L++L+ I FN
Sbjct: 682 TIEVNDTEQLNSLLKRLTRLPGIINAH--RFN 711
>gi|270308138|ref|YP_003330196.1| acetolactate synthase, small subunit [Dehalococcoides sp. VS]
gi|270154030|gb|ACZ61868.1| acetolactate synthase, small subunit [Dehalococcoides sp. VS]
Length = 178
Score = 41.2 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-- 76
+ + I + D G++ + ++ G NI +GRS++ + + +DG+
Sbjct: 1 MPPTKHTIVALVEDRPGVLNRMASLFRRRGFNIDSIAVGRSETPGFSRMTIVVDGANTMV 60
Query: 77 NSVLEKL 83
V ++L
Sbjct: 61 EQVRKQL 67
>gi|85077261|ref|XP_955999.1| D-3-phosphoglycerate dehydrogenase 1 [Neurospora crassa OR74A]
gi|28917038|gb|EAA26763.1| D-3-phosphoglycerate dehydrogenase 1 [Neurospora crassa OR74A]
Length = 466
Score = 41.2 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 7/91 (7%), Positives = 30/91 (32%), Gaps = 9/91 (9%)
Query: 10 IKIQEINFDV----DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ + E+ + + ++ ++ G++ V IL E+ ++ + A
Sbjct: 377 VNVPEVTMRSLTLDEPNHARVIYIHRNVPGVLRKVNEILAEHNVD----KQISDSKGDLA 432
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ + ++ + ++ +
Sbjct: 433 YLMADV-SDVKQDDIKNIRDSLDSLSSRILT 462
>gi|325969329|ref|YP_004245521.1| threonine dehydratase [Vulcanisaeta moutnovskia 768-28]
gi|323708532|gb|ADY02019.1| threonine dehydratase [Vulcanisaeta moutnovskia 768-28]
Length = 412
Score = 41.2 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQST---EHAISFLCIDGSILNSVLEKLSV 85
D G++ V ++LG+ G+NI R T +A+ ++ + L+K+
Sbjct: 342 DRPGMLGKVTSVLGDLGVNILDIFHERYDPTITPGYAMVSFIVELPPEENALDKVMN 398
>gi|225685084|gb|EEH23368.1| D-3-phosphoglycerate dehydrogenase [Paracoccidioides brasiliensis
Pb03]
Length = 288
Score = 41.2 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 31/89 (34%), Gaps = 8/89 (8%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + + + + ++ +I G++ V ILG++ ++ + A
Sbjct: 204 VNLRSLTIE-EPNHGRVIFIHQNIPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMA 258
Query: 70 CIDGSIL---NSVLEKLSVNVTIRFVKQF 95
I + EKL + +
Sbjct: 259 DISDVSTSDIKDLYEKLESLPSRIMTRIL 287
>gi|116071073|ref|ZP_01468342.1| Homoserine dehydrogenase [Synechococcus sp. BL107]
gi|116066478|gb|EAU72235.1| Homoserine dehydrogenase [Synechococcus sp. BL107]
Length = 435
Score = 41.2 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVNVT 88
D G++ +G G+ G++I + I + + + ++ L+ +
Sbjct: 365 QDAPGVIGRIGGCFGDGGVSIQSIVQFNASKAGAEIVVITHEVSQTKMDDALKSIQALPE 424
Query: 89 I 89
+
Sbjct: 425 V 425
>gi|154508818|ref|ZP_02044460.1| hypothetical protein ACTODO_01328 [Actinomyces odontolyticus ATCC
17982]
gi|153798452|gb|EDN80872.1| hypothetical protein ACTODO_01328 [Actinomyces odontolyticus ATCC
17982]
Length = 399
Score = 41.2 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
++ D G + + + LGE GINI L S + ++ + ID ++++ + L
Sbjct: 334 VLIPDEPGALGRLFSELGEAGINIEDLVLEHSAGAQAGVARVMIDPAVVDRAVADLQQ 391
>gi|5733116|gb|AAD49432.1|AF175526_1 acetohydroxy acid synthase small subunit [Streptomyces
cinnamonensis]
Length = 175
Score = 41.2 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ + G++ + + G NI +G ++ + + + ++ L V +
Sbjct: 5 HTLSVLVENKPGVLARITALFSRRGFNIDSLAVGVTEHPDISRITIVVNVEDLPLEQVTK 64
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + + + E
Sbjct: 65 QLNKLVNVLKIVELE 79
>gi|323167877|gb|EFZ53568.1| GTP pyrophosphokinase domain protein [Shigella sonnei 53G]
Length = 148
Score = 41.2 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 55 RIV--DAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLA 112
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 113 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 146
>gi|57234420|ref|YP_181559.1| acetolactate synthase 3 regulatory subunit [Dehalococcoides
ethenogenes 195]
gi|57224868|gb|AAW39925.1| acetolactate synthase, small subunit [Dehalococcoides ethenogenes
195]
Length = 178
Score = 41.2 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-- 76
+ + I + D G++ + ++ G NI +GRS++ + + +DG+
Sbjct: 1 MSPTKHTIVALVEDRPGVLNRMASLFRRRGFNIDSIAVGRSETPGFSRMTIVVDGANTMV 60
Query: 77 NSVLEKL 83
V ++L
Sbjct: 61 EQVRKQL 67
>gi|302389801|ref|YP_003825622.1| MgtC/SapB transporter [Thermosediminibacter oceani DSM 16646]
gi|302200429|gb|ADL07999.1| MgtC/SapB transporter [Thermosediminibacter oceani DSM 16646]
Length = 220
Score = 41.2 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHL-GRSQSTEHAISFLCIDGSIL-NSVLEKLSVNVTI 89
D G + +G ILGE G+ I + S + L + ++ + V+ +LS I
Sbjct: 156 DKPGQIGRIGTILGEMGVGIKKIRIESTENSRMVIVLLLRLPSNVSLDEVIARLSQIEGI 215
Query: 90 RFV 92
+
Sbjct: 216 YSI 218
>gi|291326699|ref|ZP_06574051.1| hypothetical protein PROVRETT_07548 [Providencia rettgeri DSM 1131]
gi|291313250|gb|EFE53703.1| GTP diphosphokinase [Providencia rettgeri DSM 1131]
Length = 494
Score = 41.2 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 5/87 (5%)
Query: 12 IQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
I + + + + D G++ + IL +N+ + A +
Sbjct: 404 IDAVWGENYSSGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVSSRSDVKQQLATIDM 463
Query: 70 CID---GSILNSVLEKLSVNVTIRFVK 93
I+ +L+ VL KL+ + K
Sbjct: 464 TIELYNIEVLSRVLAKLNQLPDVIEAK 490
>gi|258571449|ref|XP_002544528.1| D-3-phosphoglycerate dehydrogenase 1 [Uncinocarpus reesii 1704]
gi|237904798|gb|EEP79199.1| D-3-phosphoglycerate dehydrogenase 1 [Uncinocarpus reesii 1704]
Length = 489
Score = 41.2 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 26/70 (37%), Gaps = 7/70 (10%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI---SFLCIDGSIL 76
+ + ++ ++ G++ V ILG + ++ + A +D S +
Sbjct: 401 EPNHARVIFIHRNVPGVLRKVNEILGNHNVD----KQMTDSRGDVAYLMADISDVDSSEI 456
Query: 77 NSVLEKLSVN 86
+ E+L
Sbjct: 457 KDLYEQLETL 466
>gi|188996556|ref|YP_001930807.1| (p)ppGpp synthetase I, SpoT/RelA [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931623|gb|ACD66253.1| (p)ppGpp synthetase I, SpoT/RelA [Sulfurihydrogenibium sp. YO3AOP1]
Length = 713
Score = 41.2 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEKLSVNVT 88
D G++ V N + NI++ + +S + I + + + LN +L+ +
Sbjct: 643 EDKPGMLANVSNAVANAKSNISNARVQTLKSGKAIIDLTIQVRNKEHLNGILKSIKNTPG 702
Query: 89 IRFV-KQFE 96
+ V + +
Sbjct: 703 VISVSRVLK 711
>gi|119182670|ref|XP_001242457.1| hypothetical protein CIMG_06353 [Coccidioides immitis RS]
Length = 470
Score = 41.2 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 6/79 (7%), Positives = 24/79 (30%), Gaps = 7/79 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--- 76
+ + ++ ++ G++ V +L + ++ + A I
Sbjct: 395 EPNHARVIFIHRNVPGVLRKVNEVLANHNVD----KQMTDSRGDVAYLMADISDVNSSDI 450
Query: 77 NSVLEKLSVNVTIRFVKQF 95
+ ++L + +
Sbjct: 451 KELYQQLESLSSRIMTRVL 469
>gi|29374749|ref|NP_813901.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis V583]
gi|256618439|ref|ZP_05475285.1| L-serine dehydratase [Enterococcus faecalis ATCC 4200]
gi|256956925|ref|ZP_05561096.1| L-serine dehydratase [Enterococcus faecalis DS5]
gi|256964068|ref|ZP_05568239.1| L-serine dehydratase [Enterococcus faecalis HIP11704]
gi|257078598|ref|ZP_05572959.1| L-serine dehydratase [Enterococcus faecalis JH1]
gi|257087918|ref|ZP_05582279.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|257088574|ref|ZP_05582935.1| predicted protein [Enterococcus faecalis CH188]
gi|257418760|ref|ZP_05595754.1| predicted protein [Enterococcus faecalis T11]
gi|257421431|ref|ZP_05598421.1| L-serine dehydratase [Enterococcus faecalis X98]
gi|29342207|gb|AAO79973.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis V583]
gi|256597966|gb|EEU17142.1| L-serine dehydratase [Enterococcus faecalis ATCC 4200]
gi|256947421|gb|EEU64053.1| L-serine dehydratase [Enterococcus faecalis DS5]
gi|256954564|gb|EEU71196.1| L-serine dehydratase [Enterococcus faecalis HIP11704]
gi|256986628|gb|EEU73930.1| L-serine dehydratase [Enterococcus faecalis JH1]
gi|256995948|gb|EEU83250.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|256997386|gb|EEU83906.1| predicted protein [Enterococcus faecalis CH188]
gi|257160588|gb|EEU90548.1| predicted protein [Enterococcus faecalis T11]
gi|257163255|gb|EEU93215.1| L-serine dehydratase [Enterococcus faecalis X98]
Length = 219
Score = 41.2 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 3 SDGKPRF--IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G I++ N + ++ ++N + + + L + NI + R
Sbjct: 128 GGGTIEVKYIELDGFNVQLHGPLPILLVINQEEQAMQA-FKDTLQKN--NIQVNAVSRYV 184
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ +D + ++SV E+L +
Sbjct: 185 EGNQILFIFDLDSAPISSVKEQLFSLDDTSKIILL 219
>gi|188582633|ref|YP_001926078.1| (p)ppGpp synthetase I, SpoT/RelA [Methylobacterium populi BJ001]
gi|179346131|gb|ACB81543.1| (p)ppGpp synthetase I, SpoT/RelA [Methylobacterium populi BJ001]
Length = 743
Score = 41.2 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SVL 80
+ + + + G + + ++ E+ NI + + R + + ID S+ + +++
Sbjct: 670 LALESINEPGTLAQIAQVIAEHDGNIDNVSMKRRTQD---FTDISIDLSVPDLKHLTAIV 726
Query: 81 EKLSVNVTIRFVKQFE 96
L ++ V++
Sbjct: 727 ADLRGKRSVSRVERVN 742
>gi|317138768|ref|XP_001817125.2| D-3-phosphoglycerate dehydrogenase 1 [Aspergillus oryzae RIB40]
Length = 464
Score = 41.2 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 29/79 (36%), Gaps = 7/79 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSIL 76
+ + ++ +I G++ V ILG++ ++ + A +D + +
Sbjct: 389 EPEHARVIYIHQNIPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMADISNVDNTTI 444
Query: 77 NSVLEKLSVNVTIRFVKQF 95
+ E+L + +
Sbjct: 445 KDLYERLESLSSRIMTRIL 463
>gi|271969260|ref|YP_003343456.1| acetolactate synthase 3 regulatory subunit [Streptosporangium
roseum DSM 43021]
gi|270512435|gb|ACZ90713.1| acetolactate synthase 3 regulatory subunit [Streptosporangium
roseum DSM 43021]
Length = 174
Score = 41.2 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNS 78
+ R + ++ + G++ V ++ G NI +G ++ + + + ++ L
Sbjct: 1 MSRHTLSVLVENKPGVLARVASLFSRRGFNIDSLAVGPTEHEDISRMTIVVNVEELPLEQ 60
Query: 79 VLEKLSVNVTIRFV 92
V ++L+ V + +
Sbjct: 61 VTKQLNKLVNVLKI 74
>gi|317125484|ref|YP_004099596.1| acetolactate synthase, small subunit [Intrasporangium calvum DSM
43043]
gi|315589572|gb|ADU48869.1| acetolactate synthase, small subunit [Intrasporangium calvum DSM
43043]
Length = 170
Score = 41.2 bits (96), Expect = 0.050, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNS 78
+ + + ++ + G++ V + G NI +G ++ E + + + GS+L
Sbjct: 1 MSKHTLSVLVENKPGVLTRVAALFSRRGFNIDSLAVGPTEIPEISRMTVVVEVQGSVLEQ 60
Query: 79 VLEKLSVNVTIRFV 92
V ++L+ + + V
Sbjct: 61 VTKQLNKLIEVLKV 74
>gi|307946590|ref|ZP_07661925.1| GTP diphosphokinase [Roseibium sp. TrichSKD4]
gi|307770254|gb|EFO29480.1| GTP diphosphokinase [Roseibium sp. TrichSKD4]
Length = 762
Score = 41.2 bits (96), Expect = 0.050, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Query: 14 EINFDVDIGRL--MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LC 70
+I+ D D R + I + G + + ++GE NI + + + H + L
Sbjct: 676 DIDVD-DPERFPARLNIAAVNEPGSLATIAQVIGENNGNIDNVKMTQKAEDFHQMVIDLE 734
Query: 71 I-DGSILNSVLEKLSVNVTIRFVKQFE 96
+ D LN ++ +L + V +
Sbjct: 735 VWDLKHLNRIINQLRSKPNVSSVSRVN 761
>gi|313126474|ref|YP_004036744.1| acetolactate synthase, small subunit [Halogeometricum borinquense
DSM 11551]
gi|312292839|gb|ADQ67299.1| acetolactate synthase, small subunit [Halogeometricum borinquense
DSM 11551]
Length = 226
Score = 41.2 bits (96), Expect = 0.050, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 10 IKIQEINFDVDIGRLMICIVN--ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
I+I + + I + G++ V ++ NI +G + H+
Sbjct: 36 IRIDP-EVEAEPDTQRAVISALVENDPGVLSRVSGLVSRRQFNIESLTVGPTTVDGHSRI 94
Query: 68 FLCIDGSIL--NSVLEKLSVNVTIRFV 92
+ ++ + + ++LS + V
Sbjct: 95 TMVVEEPAPGIDQIEKQLSKLKPVISV 121
>gi|294631549|ref|ZP_06710109.1| acetolactate synthase, small subunit [Streptomyces sp. e14]
gi|292834882|gb|EFF93231.1| acetolactate synthase, small subunit [Streptomyces sp. e14]
Length = 174
Score = 41.2 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNS 78
+ + + ++ + G++ + + G NI +G ++ + + + ++ L
Sbjct: 1 MSKHTLSVLVENTPGVLARITALFSRRGFNIDSLAVGVTEHPDISRITIVVSVEDFPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 VTKQLNKLVNVLKIVELE 78
>gi|293384902|ref|ZP_06630740.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis R712]
gi|293388592|ref|ZP_06633093.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis S613]
gi|312908714|ref|ZP_07767654.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis DAPTO 512]
gi|312979176|ref|ZP_07790882.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis DAPTO 516]
gi|291077820|gb|EFE15184.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis R712]
gi|291082050|gb|EFE19013.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis S613]
gi|310625313|gb|EFQ08596.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis DAPTO 512]
gi|311288048|gb|EFQ66604.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis DAPTO 516]
Length = 231
Score = 41.2 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 3 SDGKPRF--IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G I++ N + ++ ++N + + + L + NI + R
Sbjct: 140 GGGTIEVKYIELDGFNVQLHGPLPILLVINQEEQAMQA-FKDTLQKN--NIQVNAVSRYV 196
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ +D + ++SV E+L +
Sbjct: 197 EGNQILFIFDLDSAPISSVKEQLFSLDDTSKIILL 231
>gi|108762300|ref|YP_631405.1| GTP pyrophosphokinase [Myxococcus xanthus DK 1622]
gi|108466180|gb|ABF91365.1| GTP pyrophosphokinase [Myxococcus xanthus DK 1622]
Length = 753
Score = 41.2 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D G++ + N + G+NI A+ + + D L ++ + +
Sbjct: 688 DRPGLLADITNTFSKKGVNISQANCRATGDDRAVNTFEVIISDLKQLTDLMRTIERLQGV 747
Query: 90 RFVKQF 95
V++
Sbjct: 748 YSVERI 753
>gi|108798875|ref|YP_639072.1| acetolactate synthase 3 regulatory subunit [Mycobacterium sp.
MCS]
gi|119867990|ref|YP_937942.1| acetolactate synthase 3 regulatory subunit [Mycobacterium sp.
KMS]
gi|126434475|ref|YP_001070166.1| acetolactate synthase 3 regulatory subunit [Mycobacterium sp.
JLS]
gi|108769294|gb|ABG08016.1| acetolactate synthase, small subunit [Mycobacterium sp. MCS]
gi|119694079|gb|ABL91152.1| acetolactate synthase, small subunit [Mycobacterium sp. KMS]
gi|126234275|gb|ABN97675.1| acetolactate synthase, small subunit [Mycobacterium sp. JLS]
Length = 172
Score = 41.2 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ D G++ V ++ G NI +G ++ + + ++ + L + +
Sbjct: 10 HTLSVLVEDKPGVLARVASLFSRRGFNIQSLAVGATEQKNMSRMTIVVSVEEAPLEQITK 69
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 70 QLNKLINVIKI 80
>gi|14521238|ref|NP_126713.1| hypothetical protein PAB0691 [Pyrococcus abyssi GE5]
gi|5458456|emb|CAB49944.1| Acetolactate synthase, small chain [Pyrococcus abyssi GE5]
Length = 135
Score = 41.2 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV-NVTI 89
D G++ + +LG++ +NI +S A +D S + L++L I
Sbjct: 64 IDRPGVLAKISGVLGKHRVNILFNESEELESLGLAAIVAIVDVSDADISLKELEEIIKGI 123
Query: 90 RFVKQFEF 97
VK+ +
Sbjct: 124 EEVKEVKI 131
>gi|327470500|gb|EGF15956.1| D-isomer specific 2-hydroxyacid dehydrogenase [Streptococcus
sanguinis SK330]
Length = 391
Score = 41.2 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 32/96 (33%), Gaps = 6/96 (6%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ + I ++N ++ IV + + + I ++ +
Sbjct: 298 GEIINSVNFPNVR-QALSAPYRITLINKNVPNIVARISTAVSDLNI--NIDNIINRSKGD 354
Query: 64 HAISFLCIDGSIL---NSVLEKLSVNVTIRFVKQFE 96
A + L +D S +++K + I V+ +
Sbjct: 355 FAYTLLDLDESDESKIQDLVDKFENSDNIVRVRLIK 390
>gi|229550616|ref|ZP_04439341.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis ATCC 29200]
gi|294781554|ref|ZP_06746892.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis PC1.1]
gi|300861768|ref|ZP_07107848.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TUSoD Ef11]
gi|229304335|gb|EEN70331.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis ATCC 29200]
gi|294451411|gb|EFG19875.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis PC1.1]
gi|295112412|emb|CBL31049.1| L-serine ammonia-lyase [Enterococcus sp. 7L76]
gi|300848293|gb|EFK76050.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TUSoD Ef11]
gi|323479330|gb|ADX78769.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis 62]
Length = 235
Score = 41.2 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 3 SDGKPRF--IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G I++ N + ++ ++N + + + L + NI + R
Sbjct: 144 GGGTIEVKYIELDGFNVQLHGPLPILLVINQEEQAMQA-FKDTLQKN--NIQVNAVSRYV 200
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ +D + ++SV E+L +
Sbjct: 201 EGNQILFIFDLDSAPISSVKEQLFSLDDTSKIILL 235
>gi|189424279|ref|YP_001951456.1| homoserine dehydrogenase [Geobacter lovleyi SZ]
gi|189420538|gb|ACD94936.1| Homoserine dehydrogenase [Geobacter lovleyi SZ]
Length = 439
Score = 41.2 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 30/88 (34%), Gaps = 5/88 (5%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI-SFLCIDGS 74
+ I M+ D G++ + +LG+ GI+I + A+ + +
Sbjct: 348 PMEEIITSFMLRFTAQDQPGVLAGIAGVLGKNGISIESMVQTARHNGGQAVPIVIKTHEA 407
Query: 75 ILNSVLEKLSVNVTIRFV----KQFEFN 98
++ L+ + F+ +
Sbjct: 408 REGAIRTALAEIDSFDFISEKSRLIRIE 435
>gi|157878938|ref|XP_001687300.1| D-3-phosphoglycerate dehydrogenase-like protein [Leishmania major]
gi|321438215|emb|CBZ11967.1| D-3-phosphoglycerate dehydrogenase-like protein [Leishmania major
strain Friedlin]
Length = 511
Score = 41.2 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ + V+A++ G + + + + G N+ L S++ + +D + + +
Sbjct: 439 SKFRLTNVHANVPGALNEINKVAVDLGCNMGMQFLSTSKAIG--YLIMDVDKDVAVELRK 496
Query: 82 KLSVNVTIRF 91
++S
Sbjct: 497 RISALKYSIR 506
>gi|255971639|ref|ZP_05422225.1| predicted protein [Enterococcus faecalis T1]
gi|255974604|ref|ZP_05425190.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|256761945|ref|ZP_05502525.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|255962657|gb|EET95133.1| predicted protein [Enterococcus faecalis T1]
gi|255967476|gb|EET98098.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|256683196|gb|EEU22891.1| conserved hypothetical protein [Enterococcus faecalis T3]
Length = 223
Score = 41.2 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 3 SDGKPRF--IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G I++ N + ++ ++N + + + L + NI + R
Sbjct: 132 GGGTIEVKYIELDGFNVQLHGPLPILLVINQEEQAMQA-FKDTLQKN--NIQVNAVSRYV 188
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ +D + ++SV E+L +
Sbjct: 189 EGNQILFIFDLDSAPISSVKEQLFSLDDTSKIILL 223
>gi|227555778|ref|ZP_03985825.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis HH22]
gi|307269016|ref|ZP_07550379.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX4248]
gi|307274103|ref|ZP_07555312.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0855]
gi|307276337|ref|ZP_07557463.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX2134]
gi|307278219|ref|ZP_07559300.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0860]
gi|307287081|ref|ZP_07567154.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0109]
gi|312903847|ref|ZP_07763019.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0635]
gi|312952532|ref|ZP_07771399.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0102]
gi|227175074|gb|EEI56046.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis HH22]
gi|306501860|gb|EFM71150.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0109]
gi|306505094|gb|EFM74283.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0860]
gi|306507002|gb|EFM76146.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX2134]
gi|306509228|gb|EFM78289.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0855]
gi|306514685|gb|EFM83237.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX4248]
gi|310629530|gb|EFQ12813.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0102]
gi|310632791|gb|EFQ16074.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0635]
gi|315026716|gb|EFT38648.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX2137]
gi|315031220|gb|EFT43152.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0017]
gi|315036452|gb|EFT48384.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0027]
gi|315143213|gb|EFT87229.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX2141]
gi|315153456|gb|EFT97472.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0031]
gi|315156334|gb|EFU00351.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0043]
gi|315158471|gb|EFU02488.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0312]
gi|315160825|gb|EFU04842.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0645]
gi|315165767|gb|EFU09784.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX1302]
gi|315174092|gb|EFU18109.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX1346]
gi|315577012|gb|EFU89203.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0630]
Length = 231
Score = 41.2 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 3 SDGKPRF--IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G I++ N + ++ ++N + + + L + NI + R
Sbjct: 140 GGGTIEVKYIELDGFNVQLHGPLPILLVINQEEQAMQA-FKDTLQKN--NIQVNAVSRYV 196
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ +D + ++SV E+L +
Sbjct: 197 EGNQILFIFDLDSAPISSVKEQLFSLDDTSKIILL 231
>gi|125597202|gb|EAZ36982.1| hypothetical protein OsJ_21322 [Oryza sativa Japonica Group]
Length = 358
Score = 41.2 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 27/73 (36%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D G++ + + G NI +G ++ + IL V+E+L
Sbjct: 20 HTLSVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTEKILKQVVEQL 79
Query: 84 SVNVTIRFVKQFE 96
+ V + V
Sbjct: 80 NKLVNVIQVDDLS 92
>gi|297156965|gb|ADI06677.1| acetolactate synthase 3 regulatory subunit [Streptomyces
bingchenggensis BCW-1]
Length = 175
Score = 41.2 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ + GI+ + + G NI +G ++ + + + +D L V +
Sbjct: 5 HTLSVLVENTPGILARIAALFSRRGFNIDSLAVGVTEHPDISRITIVVNVDELPLEQVTK 64
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + + + E
Sbjct: 65 QLNKLVNVLKIVELE 79
>gi|241890074|ref|ZP_04777372.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Gemella
haemolysans ATCC 10379]
gi|241863696|gb|EER68080.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit [Gemella
haemolysans ATCC 10379]
Length = 222
Score = 41.2 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 29/95 (30%), Gaps = 7/95 (7%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNA---DILGIVV-FVGNILGEYGINIAHFHLGR 58
GK ++ + ++ I D + + I G+ +N +
Sbjct: 126 GGGKMVIFELLGFDVNLSGDFPSYFIFYKFKDDTKKNLSVQIEEIFGDLKVN--EMYSS- 182
Query: 59 SQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVK 93
S + + + ++KL+ I VK
Sbjct: 183 SILEGINLLVIESQKELTEDKIKKLTELDYINEVK 217
>gi|315574027|gb|EFU86218.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0309B]
gi|315581978|gb|EFU94169.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0309A]
Length = 231
Score = 41.2 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 3 SDGKPRF--IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G I++ N + ++ ++N + + + L + NI + R
Sbjct: 140 GGGTIEVKYIELDGFNVQLHGPLPILLVINQEEQAMQA-FKDTLQKN--NIQVNAVSRYV 196
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ +D + ++SV E+L +
Sbjct: 197 EGNQILFIFDLDSAPISSVKEQLFSLDDTSKIILL 231
>gi|299135106|ref|ZP_07028297.1| (p)ppGpp synthetase I, SpoT/RelA [Afipia sp. 1NLS2]
gi|298590083|gb|EFI50287.1| (p)ppGpp synthetase I, SpoT/RelA [Afipia sp. 1NLS2]
Length = 755
Score = 41.2 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ + N + G + V ++ E+ NI + + R + L ID + + L+ L+
Sbjct: 681 RLHVQNVNEPGSLAQVAGVIAEHDGNIDNIGMSRRSPD---FTDLIIDLEVYD--LKHLN 735
Query: 85 VNVTIRFVKQF 95
+ K
Sbjct: 736 GIINQLRAKAV 746
>gi|226305885|ref|YP_002765845.1| acetolactate synthase small subunit [Rhodococcus erythropolis
PR4]
gi|229493380|ref|ZP_04387169.1| acetolactate synthase, small subunit [Rhodococcus erythropolis
SK121]
gi|226185002|dbj|BAH33106.1| acetolactate synthase small subunit [Rhodococcus erythropolis
PR4]
gi|229319696|gb|EEN85528.1| acetolactate synthase, small subunit [Rhodococcus erythropolis
SK121]
Length = 167
Score = 41.2 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ D G++ V + G NI +G ++ E + + +D L V +
Sbjct: 5 HTLSVLVEDKPGVLARVSALFSRRGFNIESLAVGGTEIPEISRMTIVVTVDEFPLEQVTK 64
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 65 QLNKLINVIKI 75
>gi|83764979|dbj|BAE55123.1| unnamed protein product [Aspergillus oryzae]
Length = 288
Score = 41.2 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 29/79 (36%), Gaps = 7/79 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSIL 76
+ + ++ +I G++ V ILG++ ++ + A +D + +
Sbjct: 213 EPEHARVIYIHQNIPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMADISNVDNTTI 268
Query: 77 NSVLEKLSVNVTIRFVKQF 95
+ E+L + +
Sbjct: 269 KDLYERLESLSSRIMTRIL 287
>gi|255691337|ref|ZP_05415012.1| acetolactate synthase, small subunit [Bacteroides finegoldii DSM
17565]
gi|260622979|gb|EEX45850.1| acetolactate synthase, small subunit [Bacteroides finegoldii DSM
17565]
Length = 188
Score = 41.2 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + +I G++ V + INI ++ S + D + V++
Sbjct: 7 YTIIVHSENIAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDTIEKVVK 66
Query: 82 KLSVNVTIRFVKQFE 96
++ + + F
Sbjct: 67 QIEKKIDVIQAHYFT 81
>gi|163852611|ref|YP_001640654.1| RelA/SpoT family protein [Methylobacterium extorquens PA1]
gi|218531452|ref|YP_002422268.1| (p)ppGpp synthetase I, SpoT/RelA [Methylobacterium chloromethanicum
CM4]
gi|240139945|ref|YP_002964422.1| GTP pyrophosphokinase [Methylobacterium extorquens AM1]
gi|254562370|ref|YP_003069465.1| GTP pyrophosphokinase [Methylobacterium extorquens DM4]
gi|163664216|gb|ABY31583.1| RelA/SpoT family protein [Methylobacterium extorquens PA1]
gi|218523755|gb|ACK84340.1| (p)ppGpp synthetase I, SpoT/RelA [Methylobacterium chloromethanicum
CM4]
gi|240009919|gb|ACS41145.1| GTP pyrophosphokinase [Methylobacterium extorquens AM1]
gi|254269648|emb|CAX25620.1| GTP pyrophosphokinase [Methylobacterium extorquens DM4]
Length = 743
Score = 41.2 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SVL 80
+ + + + G + + ++ E+ NI + + R + + ID S+ + +++
Sbjct: 670 LALESINEPGTLAQIAQVIAEHDGNIDNVSMKRRTQD---FTDISIDLSVPDLKHLTAIV 726
Query: 81 EKLSVNVTIRFVKQFE 96
L ++ V++
Sbjct: 727 ADLRGKRSVSRVERVN 742
>gi|74316861|ref|YP_314601.1| homoserine dehydrogenase [Thiobacillus denitrificans ATCC 25259]
gi|74056356|gb|AAZ96796.1| homoserine dehydrogenase [Thiobacillus denitrificans ATCC 25259]
Length = 437
Score = 41.2 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 9/78 (11%), Positives = 24/78 (30%), Gaps = 4/78 (5%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
+ + + D G++ + IL + I+I E + + +
Sbjct: 345 PMEAVRTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTHVT 404
Query: 76 LN----SVLEKLSVNVTI 89
L + + K+ +
Sbjct: 405 LEKNVNAAIAKIEALDAV 422
>gi|302037898|ref|YP_003798220.1| putative glycine cleavage system transcriptional repressor
[Candidatus Nitrospira defluvii]
gi|300605962|emb|CBK42295.1| putative Glycine cleavage system transcriptional repressor
[Candidatus Nitrospira defluvii]
Length = 182
Score = 41.2 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 9/81 (11%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS------ 78
++ + AD GIV V + + NI + S + I + ++ + +
Sbjct: 98 ILSVYGADHPGIVAQVARTVARHQGNITDMNTRVVGSGDRPIYVMVLEVQLPEAQQADQL 157
Query: 79 --VLEKLSVNVTI-RFVKQFE 96
LE+L + + + E
Sbjct: 158 RQALEELKPLLGVDLTFRLLE 178
>gi|299139284|ref|ZP_07032460.1| homoserine dehydrogenase [Acidobacterium sp. MP5ACTX8]
gi|298598964|gb|EFI55126.1| homoserine dehydrogenase [Acidobacterium sp. MP5ACTX8]
Length = 436
Score = 40.8 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Query: 10 IKIQEINFDVDIG---RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
+++ +V G + V AD GIV + L ++G+NI R +
Sbjct: 333 VRLPAKKVEVSGGVIAPHYLRFVVADRPGIVAAIAGALAKFGVNIDSILQHRGFGGDRLP 392
Query: 67 SFLCIDGSILNSVLEKLSVN 86
+ + S ++ + ++
Sbjct: 393 FVVTTEPSNSATLDKAIAEI 412
>gi|134084040|emb|CAL00578.1| unnamed protein product [Aspergillus niger]
Length = 480
Score = 40.8 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 29/80 (36%), Gaps = 7/80 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSIL 76
+ + ++ ++ G++ V ILG++ ++ + A +D + +
Sbjct: 399 EPDHARVIFIHQNVPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMADISSVDNTTI 454
Query: 77 NSVLEKLSVNVTIRFVKQFE 96
+ E+L + +
Sbjct: 455 KDLYERLESLGCTKSLSSIS 474
>gi|21223869|ref|NP_629648.1| acetolactate synthase 3 regulatory subunit [Streptomyces
coelicolor A3(2)]
gi|256785033|ref|ZP_05523464.1| acetolactate synthase 3 regulatory subunit [Streptomyces lividans
TK24]
gi|289768926|ref|ZP_06528304.1| acetolactate synthase, small subunit [Streptomyces lividans TK24]
gi|4467264|emb|CAB37589.1| acetolactate synthase small subunit [Streptomyces coelicolor
A3(2)]
gi|289699125|gb|EFD66554.1| acetolactate synthase, small subunit [Streptomyces lividans TK24]
Length = 174
Score = 40.8 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNS 78
+ + + ++ + G++ + + G NI +G ++ + + + ++ L
Sbjct: 1 MSKHTLSVLVENTPGVLARITALFSRRGFNIDSLAVGVTEHPDISRITIVVSVEDFPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 VTKQLNKLVNVLKIVELE 78
>gi|328769391|gb|EGF79435.1| hypothetical protein BATDEDRAFT_89518 [Batrachochytrium
dendrobatidis JAM81]
Length = 433
Score = 40.8 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 27/93 (29%), Gaps = 10/93 (10%)
Query: 10 IKIQEINFDVDIGRL---MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
+ E++ + + + ++ G++ + IL E NI A
Sbjct: 345 VNFPEVDIRLSAAGSSTIRVINCHHNVPGVLKQINRILSE--FNIEKQIC--DSKGNIAY 400
Query: 67 SFLCIDGSILNSVL---EKLSVNVTIRFVKQFE 96
I N ++ E +S +
Sbjct: 401 LIADIIVDGQNDLIKIYESVSSIPESIATRLLH 433
>gi|322420502|ref|YP_004199725.1| homoserine dehydrogenase [Geobacter sp. M18]
gi|320126889|gb|ADW14449.1| homoserine dehydrogenase [Geobacter sp. M18]
Length = 435
Score = 40.8 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNV--TI 89
D G++ + LG GI+IA + E I + D V + L+ +
Sbjct: 362 DRPGVLARIAGALGARGISIASMLQSARSADEVPIVIMTHDAR-EEDVRKALAEIDTFEV 420
Query: 90 RFVK 93
K
Sbjct: 421 IRAK 424
>gi|237720096|ref|ZP_04550577.1| acetohydroxyacid synthase small subunit [Bacteroides sp. 2_2_4]
gi|260174057|ref|ZP_05760469.1| acetohydroxyacid synthase small subunit [Bacteroides sp. D2]
gi|299147974|ref|ZP_07041037.1| acetolactate synthase, small subunit [Bacteroides sp. 3_1_23]
gi|315922326|ref|ZP_07918566.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|229450648|gb|EEO56439.1| acetohydroxyacid synthase small subunit [Bacteroides sp. 2_2_4]
gi|298514157|gb|EFI38043.1| acetolactate synthase, small subunit [Bacteroides sp. 3_1_23]
gi|313696201|gb|EFS33036.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 187
Score = 40.8 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + +I G++ V + INI ++ S + D + V++
Sbjct: 7 YTIIVHSENIAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITALTDKDTIEKVVK 66
Query: 82 KLSVNVTIRFVKQFE 96
++ + + F
Sbjct: 67 QIEKKIDVIQAHYFT 81
>gi|291454150|ref|ZP_06593540.1| homoserine dehydrogenase [Streptomyces albus J1074]
gi|291357099|gb|EFE84001.1| homoserine dehydrogenase [Streptomyces albus J1074]
Length = 429
Score = 40.8 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 31/88 (35%), Gaps = 10/88 (11%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
V ++ + D G++ V + E+G++I + ++ A +
Sbjct: 338 RLPVSPMGKVVTRYHISLDVADKPGVLAQVATVFAEHGVSIDT--VRQTGKDGEASLVVV 395
Query: 71 IDGSILNSV---LEKLSVNVTIRFVKQF 95
+ ++ +E L T+R V
Sbjct: 396 THRAHDAALSGTVEALRNLDTVRGVASI 423
>gi|239982305|ref|ZP_04704829.1| homoserine dehydrogenase [Streptomyces albus J1074]
Length = 406
Score = 40.8 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 31/88 (35%), Gaps = 10/88 (11%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
V ++ + D G++ V + E+G++I + ++ A +
Sbjct: 315 RLPVSPMGKVVTRYHISLDVADKPGVLAQVATVFAEHGVSIDT--VRQTGKDGEASLVVV 372
Query: 71 IDGSILNSV---LEKLSVNVTIRFVKQF 95
+ ++ +E L T+R V
Sbjct: 373 THRAHDAALSGTVEALRNLDTVRGVASI 400
>gi|224015842|ref|XP_002297567.1| GTP pyrophosphokinase [Thalassiosira pseudonana CCMP1335]
gi|220967755|gb|EED86135.1| GTP pyrophosphokinase [Thalassiosira pseudonana CCMP1335]
Length = 771
Score = 40.8 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 36/92 (39%), Gaps = 4/92 (4%)
Query: 5 GKPRFIKI--QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ R + I + + + + ++ D G + + + G NI + +L + +
Sbjct: 677 DEQRIVNIRWDDDPSLMTSRPVQLRVLMEDSPGTLSNLSRAITSVGFNIGNVNLKKLSNG 736
Query: 63 EHAISFLCIDGSILN--SVLEKLSVNVTIRFV 92
E + + ++ + +V+ K+ I V
Sbjct: 737 EGSARIEVMLKNVEDLRNVVNKIQQEDGIISV 768
>gi|323697736|ref|ZP_08109648.1| acetolactate synthase, small subunit [Desulfovibrio sp. ND132]
gi|323457668|gb|EGB13533.1| acetolactate synthase, small subunit [Desulfovibrio desulfuricans
ND132]
Length = 163
Score = 40.8 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNS 78
+ + + ++ + G++ V + G NI ++ + ++ + D +I+
Sbjct: 1 MSKHTLSVMVENEPGVLSRVAGLFSGRGFNIYSLNVAPTLEKGVSLMTIVAEGDDAIVEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
++++L + VK
Sbjct: 61 IVKQLRKLIPTIKVKDLT 78
>gi|308176961|ref|YP_003916367.1| prephenate dehydrogenase [Arthrobacter arilaitensis Re117]
gi|307744424|emb|CBT75396.1| prephenate dehydrogenase [Arthrobacter arilaitensis Re117]
Length = 366
Score = 40.8 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 19 VDIGRLMICIV-NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
+ V D G + + +G+ INI + S + + + + +
Sbjct: 292 APPQAFALVTVLIDDRPGQIAQLLTEIGDAQINIEDLRMEHSAGHQVGMVDVSVVPGRRD 351
Query: 78 SVLEKLSV 85
+++ L+
Sbjct: 352 ELIDVLTK 359
>gi|291437227|ref|ZP_06576617.1| homoserine dehydrogenase [Streptomyces ghanaensis ATCC 14672]
gi|291340122|gb|EFE67078.1| homoserine dehydrogenase [Streptomyces ghanaensis ATCC 14672]
Length = 429
Score = 40.8 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNVT 88
D G++ V + E+G++I + + A + + ++ +E L T
Sbjct: 359 DKPGVLAQVATVFAEHGVSIDT--VRQQGKDGEASLVVVTHRASDAALGGTVEALRKLDT 416
Query: 89 IRFVKQF 95
+R V
Sbjct: 417 VRGVASI 423
>gi|239928901|ref|ZP_04685854.1| homoserine dehydrogenase [Streptomyces ghanaensis ATCC 14672]
Length = 430
Score = 40.8 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNVT 88
D G++ V + E+G++I + + A + + ++ +E L T
Sbjct: 360 DKPGVLAQVATVFAEHGVSIDT--VRQQGKDGEASLVVVTHRASDAALGGTVEALRKLDT 417
Query: 89 IRFVKQF 95
+R V
Sbjct: 418 VRGVASI 424
>gi|224286063|gb|ACN40743.1| unknown [Picea sitchensis]
Length = 594
Score = 40.8 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ I + D ++ + ++L + G+NI H S + +++ +D
Sbjct: 186 NGDHIFARP-MHEITFSSDDKPKLLSQLTSLLADLGLNIQEAHAF-STTDGYSLDVFVVD 243
Query: 73 GSILNSVLEKLSV 85
G L +E+L
Sbjct: 244 GWPLEE-MEQLRQ 255
>gi|220913023|ref|YP_002488332.1| acetolactate synthase 3 regulatory subunit [Arthrobacter
chlorophenolicus A6]
gi|219859901|gb|ACL40243.1| acetolactate synthase, small subunit [Arthrobacter
chlorophenolicus A6]
Length = 170
Score = 40.8 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNS 78
+ R + ++ D G++ V ++ NI +G ++ + + DG ++
Sbjct: 1 MSRHTLSVLVEDKPGVLTRVASLFARRAFNINSLAVGPTEVPGISRMTVVVDADGELIEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ V + + +
Sbjct: 61 VTKQLNKLVNVIKIVELT 78
>gi|313500178|gb|ADR61544.1| GTP pyrophosphokinase [Pseudomonas putida BIRD-1]
Length = 741
Score = 40.8 bits (95), Expect = 0.058, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEK 82
I I D G++ V +L IN+ + ++ A+ L I+ L++ +L +
Sbjct: 666 IVIRAYDRPGLLRDVSQVLLNEKINVLAVNTRSNKEDNTALMSLTIEIPGLDALGRLLGR 725
Query: 83 LSVNVTIRFVK 93
+S I +
Sbjct: 726 ISQLPNIIETR 736
>gi|291301817|ref|YP_003513095.1| acetolactate synthase small subunit [Stackebrandtia nassauensis
DSM 44728]
gi|290571037|gb|ADD44002.1| acetolactate synthase, small subunit [Stackebrandtia nassauensis
DSM 44728]
Length = 172
Score = 40.8 bits (95), Expect = 0.058, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID--GSILNSVLEKLSVNVT 88
+ G++ V + NI +G ++ + + +D L V ++L+ +
Sbjct: 11 ENKPGVLSRVTALFSRRNFNIDSLAVGETEHPGVSRITIVVDESDHPLEQVTKQLNKLIN 70
Query: 89 IRFVKQFE 96
+ + + E
Sbjct: 71 VLKIVELE 78
>gi|296083398|emb|CBI23353.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 40.8 bits (95), Expect = 0.058, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 29/73 (39%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D GI+ + + G NI +G ++ + ++L V+E+L
Sbjct: 74 HTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNEDKALFTIVVSGTETVLRQVVEQL 133
Query: 84 SVNVTIRFVKQFE 96
+ V + VK
Sbjct: 134 NKLVNVLKVKDLS 146
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVL 80
+ ++ D G++ V ++ NI +G ++ + + D SI ++
Sbjct: 307 HTLSMLVNDTPGVLNIVTGVISRRSYNIQSLAVGPAEMEGRSHITTVVPGTDESISK-LV 365
Query: 81 EKLSVNVTIRFVKQFE 96
++L + + V+
Sbjct: 366 QQLQKLIDLHEVRDIT 381
>gi|26988388|ref|NP_743813.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudomonas putida KT2440]
gi|24983142|gb|AAN67277.1|AE016354_4 GTP pyrophosphokinase [Pseudomonas putida KT2440]
Length = 746
Score = 40.8 bits (95), Expect = 0.058, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEK 82
I I D G++ V +L IN+ + ++ A+ L I+ L++ +L +
Sbjct: 671 IVIRAYDRPGLLRDVSQVLLNEKINVLAVNTRSNKEDNTALMSLTIEIPGLDALGRLLGR 730
Query: 83 LSVNVTIRFVK 93
+S I +
Sbjct: 731 ISQLPNIIETR 741
>gi|303242479|ref|ZP_07328960.1| acetolactate synthase, small subunit [Acetivibrio cellulolyticus
CD2]
gi|302590003|gb|EFL59770.1| acetolactate synthase, small subunit [Acetivibrio cellulolyticus
CD2]
Length = 170
Score = 40.8 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLE 81
+ ++ + G++ V + G NI +G ++ E + + +DG ++ V +
Sbjct: 4 HTLSVLVENHPGVLSRVAGLFSRRGFNIDSLAVGVTEDPEVSRITIVVDGDEYVVEQVSK 63
Query: 82 KLSVNVTIRFVKQF 95
+L+ + I +KQ
Sbjct: 64 QLNKLIDIIKIKQL 77
>gi|295695592|ref|YP_003588830.1| acetolactate synthase, small subunit [Bacillus tusciae DSM 2912]
gi|295411194|gb|ADG05686.1| acetolactate synthase, small subunit [Bacillus tusciae DSM 2912]
Length = 164
Score = 40.8 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ ++ D G++ V + G NI +G ++ + L D L +++
Sbjct: 3 HVLSVLVNDQPGVLARVAGLFSRRGFNIESITVGNAEEAGLSRMTLVTSGDERTLEQIMK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L V + V
Sbjct: 63 QLHKLVDVIKVNDLT 77
>gi|297566551|ref|YP_003685523.1| acetolactate synthase small subunit [Meiothermus silvanus DSM
9946]
gi|296851000|gb|ADH64015.1| acetolactate synthase, small subunit [Meiothermus silvanus DSM
9946]
Length = 170
Score = 40.8 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ ++ D G++ + ++ G NI +GR+ + L + D ++ V +
Sbjct: 3 HLVSVLVQDHPGVLQRITALIARRGFNIDSLAVGRTHQAGLSRISLVVSGDDKVVEQVEK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 63 QLNRLIEVLKV 73
>gi|148549268|ref|YP_001269370.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas putida F1]
gi|148513326|gb|ABQ80186.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudomonas putida F1]
Length = 746
Score = 40.8 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEK 82
I I D G++ V +L IN+ + ++ A+ L I+ L++ +L +
Sbjct: 671 IVIRAYDRPGLLRDVSQVLLNEKINVLAVNTRSNKEDNTALMSLTIEIPGLDALGRLLGR 730
Query: 83 LSVNVTIRFVK 93
+S I +
Sbjct: 731 ISQLPNIIETR 741
>gi|325274863|ref|ZP_08140878.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas sp. TJI-51]
gi|324100011|gb|EGB97842.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas sp. TJI-51]
Length = 746
Score = 40.8 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEK 82
I I D G++ V +L IN+ + ++ A+ L I+ L++ +L +
Sbjct: 671 IVIRAYDRPGLLRDVSQVLLNEKINVLAVNTRSNKEDNTALMSLTIEIPGLDALGRLLGR 730
Query: 83 LSVNVTIRFVK 93
+S I +
Sbjct: 731 ISQLPNIIETR 741
>gi|302795298|ref|XP_002979412.1| hypothetical protein SELMODRAFT_111081 [Selaginella moellendorffii]
gi|300152660|gb|EFJ19301.1| hypothetical protein SELMODRAFT_111081 [Selaginella moellendorffii]
Length = 414
Score = 40.8 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 7/84 (8%)
Query: 19 VDIGR---LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---D 72
+ + +V D G++ V + G NI +G S+ + + D
Sbjct: 234 AEPNGYMSHTLSMVVNDAPGVLNRVTGVFARRGYNIQSLAVGLSERQGISRITTVVPGTD 293
Query: 73 GSILNSVLEKLSVNVTIRFVKQFE 96
SI +L +LS + + V+
Sbjct: 294 ESIRK-LLHQLSKLIDVVQVQDIT 316
>gi|298490394|ref|YP_003720571.1| acetolactate synthase small subunit ['Nostoc azollae' 0708]
gi|298232312|gb|ADI63448.1| acetolactate synthase, small subunit ['Nostoc azollae' 0708]
Length = 172
Score = 40.8 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + ++ G NI +G ++ + + + D ++ + +
Sbjct: 3 HTLSVLVEDEAGVLSRISSLFARRGFNIESLAVGPAEQGGVSRITMVVPGDDRVIEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L V + V+
Sbjct: 63 QLYKLVNVLKVQDIT 77
>gi|255943695|ref|XP_002562615.1| Pc20g00530 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587350|emb|CAP85382.1| Pc20g00530 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 463
Score = 40.8 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 8/79 (10%), Positives = 27/79 (34%), Gaps = 7/79 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSIL 76
+ + ++ +I G++ V I+G++ ++ + A +D + +
Sbjct: 388 EPDHARVIYIHKNIPGVLRKVNEIIGDHNVD----KQMTDSRGDVAYLMADISNVDAATI 443
Query: 77 NSVLEKLSVNVTIRFVKQF 95
+ L + +
Sbjct: 444 KELYTSLESLPSRIMTRVL 462
>gi|182419490|ref|ZP_02950742.1| acetolactate synthase, small subunit [Clostridium butyricum 5521]
gi|237666348|ref|ZP_04526333.1| acetolactate synthase, small subunit [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182376821|gb|EDT74393.1| acetolactate synthase, small subunit [Clostridium butyricum 5521]
gi|237657547|gb|EEP55102.1| acetolactate synthase, small subunit [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 168
Score = 40.8 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNS 78
+ + ++ ++ + G++ V + G NI +G ++ + + + D +L
Sbjct: 1 MEKHVLSVLVKNSSGVLSRVSGLFSRRGYNIDSLTVGSTEDPSISRMTITLMADDDVLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFEFNVD 100
V ++L + V F V+
Sbjct: 61 VKKQLDKLEDVIRV--VNFKVN 80
>gi|330466215|ref|YP_004403958.1| acetolactate synthase 3 regulatory subunit [Verrucosispora maris
AB-18-032]
gi|328809186|gb|AEB43358.1| acetolactate synthase 3 regulatory subunit [Verrucosispora maris
AB-18-032]
Length = 171
Score = 40.8 bits (95), Expect = 0.060, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +G +++ + + + + D S L V +
Sbjct: 4 HTLSVLVENKPGVLARVSGLFSRRGFNIDSLAVGETENPDVSRITIVVNADSSPLEQVTK 63
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 64 QLNKLVNVLKI 74
>gi|326514178|dbj|BAJ92239.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 473
Score = 40.8 bits (95), Expect = 0.060, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 30/75 (40%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
D + R I + D G++ + + G NI +G ++ + +L
Sbjct: 64 DCRVRRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTDRVLK 123
Query: 78 SVLEKLSVNVTIRFV 92
V+E+L+ V + V
Sbjct: 124 QVIEQLNKLVNVLNV 138
Score = 34.2 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVL 80
+ I+ D G++ + + G +I +G ++ + + D SI ++
Sbjct: 304 HTLSILVNDCPGVLNIITGVFARRGYSIQSLAVGPAEKEGISRITTVVPGTDESIGK-LV 362
Query: 81 EKLSVNVTIRFVKQFE 96
++L + + V
Sbjct: 363 QQLYKLIDVHKVDDLT 378
>gi|167032269|ref|YP_001667500.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas putida GB-1]
gi|166858757|gb|ABY97164.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudomonas putida GB-1]
Length = 746
Score = 40.8 bits (95), Expect = 0.060, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEK 82
I I D G++ V +L IN+ + ++ A+ L I+ L++ +L +
Sbjct: 671 IVIRAYDRPGLLRDVSQVLLNEKINVLAVNTRSNKEDNTALMSLTIEIPGLDALGRLLGR 730
Query: 83 LSVNVTIRFVK 93
+S I +
Sbjct: 731 ISQLPNIIETR 741
>gi|110667003|ref|YP_656814.1| hypothetical protein HQ1027A [Haloquadratum walsbyi DSM 16790]
gi|109624750|emb|CAJ51157.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790]
Length = 167
Score = 40.8 bits (95), Expect = 0.060, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 27/65 (41%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
+ NAD G+V + L + I+I + T+ ++ D I ++ +L+
Sbjct: 100 VNNADQPGLVAAIATRLADRNISIRQTISEDPEFTDDPKLYIVTDDPIPGELVNELTELS 159
Query: 88 TIRFV 92
+ +
Sbjct: 160 FVYRI 164
>gi|120555188|ref|YP_959539.1| homoserine dehydrogenase [Marinobacter aquaeolei VT8]
gi|120325037|gb|ABM19352.1| homoserine dehydrogenase [Marinobacter aquaeolei VT8]
Length = 433
Score = 40.8 bits (95), Expect = 0.060, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 32/85 (37%), Gaps = 8/85 (9%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN---- 77
+ I D G++ + IL E+GINI S+ + I + + ++
Sbjct: 349 SAYYLRIQAFDHPGVLAKIAAILSEHGINIESIMQKESEFKDGRIPVIILTHTVQERQMN 408
Query: 78 ---SVLEKLSVNVT-IRFVKQFEFN 98
+E L+ + ++ FN
Sbjct: 409 LAIDEMESLADIDGKVVRIRAENFN 433
>gi|332157783|ref|YP_004423062.1| hypothetical protein PNA2_0140 [Pyrococcus sp. NA2]
gi|331033246|gb|AEC51058.1| hypothetical protein PNA2_0140 [Pyrococcus sp. NA2]
Length = 166
Score = 40.8 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 27/76 (35%), Gaps = 8/76 (10%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL 76
+++ I GI+ V + + GINI + A + + I
Sbjct: 96 IEIEPEPRAI--------GILAKVAQKIADRGINIVQAIAEDPEIYPEATLTIITEKPIP 147
Query: 77 NSVLEKLSVNVTIRFV 92
++ +LS ++ +
Sbjct: 148 GDLINELSKLEGVKRI 163
>gi|94985144|ref|YP_604508.1| prephenate dehydrogenase [Deinococcus geothermalis DSM 11300]
gi|94555425|gb|ABF45339.1| Prephenate dehydrogenase [Deinococcus geothermalis DSM 11300]
Length = 370
Score = 40.8 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFH-LGRSQSTEHAISFLC 70
+ + + D + V LGE G+NI L + L
Sbjct: 297 PPKHDLVVAVPDKPNQIGAVTQALGEAGVNIKDIEVLAIREEGGAIRLGLE 347
>gi|325091742|gb|EGC45052.1| D-3-phosphoglycerate dehydrogenase [Ajellomyces capsulatus H88]
Length = 483
Score = 40.8 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 8/80 (10%), Positives = 26/80 (32%), Gaps = 7/80 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ + ++ +I G++ V IL ++ ++ + A I + +
Sbjct: 396 EPNHGRVIFIHQNIPGVLRKVNEILSDHNVD----KQMTDSRGDVAYLMADISDVHTSDI 451
Query: 80 LE---KLSVNVTIRFVKQFE 96
+ +L + +
Sbjct: 452 KDLYNRLENLPSRIMTRILH 471
>gi|297822923|ref|XP_002879344.1| hypothetical protein ARALYDRAFT_482103 [Arabidopsis lyrata subsp.
lyrata]
gi|297325183|gb|EFH55603.1| hypothetical protein ARALYDRAFT_482103 [Arabidopsis lyrata subsp.
lyrata]
Length = 492
Score = 40.8 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 27/69 (39%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D G++ + + G NI +G ++ +C +L V+E+L
Sbjct: 87 HTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNRDKALFTIVVCGTERVLQQVIEQL 146
Query: 84 SVNVTIRFV 92
V + V
Sbjct: 147 QKLVNVLKV 155
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFLCI---DGSILNSV 79
+ ++ D G++ V + G NI A+ +G +++ + + D SI +
Sbjct: 320 HTLSLLVNDTPGVLNIVTGVFARRGYNIQAYLAVGHAETKGISRITTVVPATDESISK-L 378
Query: 80 LEKLSVNVTIRFVKQFE 96
+++L V + V
Sbjct: 379 VQQLYKLVDVHEVHDLT 395
>gi|261403764|ref|YP_003247988.1| acetolactate synthase, small subunit [Methanocaldococcus
vulcanius M7]
gi|261370757|gb|ACX73506.1| acetolactate synthase, small subunit [Methanocaldococcus
vulcanius M7]
Length = 168
Score = 40.8 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTI 89
+ G++ + + G NI+ +G +++ + + + + D IL V+++L+ + +
Sbjct: 13 NKPGVLQRISGLFTRRGFNISSITVGTTENPQVSRVTIEVNGDDRILEQVIKQLNKLIDV 72
Query: 90 RFVKQFE 96
V + E
Sbjct: 73 IKVSELE 79
>gi|220935281|ref|YP_002514180.1| GTP diphosphokinase [Thioalkalivibrio sp. HL-EbGR7]
gi|219996591|gb|ACL73193.1| GTP diphosphokinase [Thioalkalivibrio sp. HL-EbGR7]
Length = 770
Score = 40.8 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 13/99 (13%), Positives = 36/99 (36%), Gaps = 16/99 (16%)
Query: 4 DGKPRFIKI------QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLG 57
+ K R +++ + ++ I D G++ + +L IN+ +
Sbjct: 675 EKKVRLVEVSWGAEPRSYPVNIRIEAF-------DRQGLLRDITGVLANDRINVLSANTR 727
Query: 58 RSQSTEHAISFLCIDGSILN---SVLEKLSVNVTIRFVK 93
+S + L ++ ++++K+ I V+
Sbjct: 728 TDRSDQTVTMELTLEVEGSAQLSALMDKIGALPNITSVR 766
>gi|169830561|ref|YP_001716543.1| acetolactate synthase, small subunit [Candidatus Desulforudis
audaxviator MP104C]
gi|169637405|gb|ACA58911.1| acetolactate synthase, small subunit [Candidatus Desulforudis
audaxviator MP104C]
Length = 165
Score = 40.8 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLEKLSVNVT 88
+ G++ V + G NI + R+ + + ++G +L V ++L V
Sbjct: 10 ENNPGVLARVAGLFSRRGYNIDSLSVSRTDDPTVSRMTIVVEGEKVVLEQVTKQLRKLVD 69
Query: 89 IRFVKQFE 96
+ V+
Sbjct: 70 VIRVRDIT 77
>gi|225469426|ref|XP_002266924.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 480
Score = 40.8 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 29/73 (39%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D GI+ + + G NI +G ++ + ++L V+E+L
Sbjct: 74 HTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNEDKALFTIVVSGTETVLRQVVEQL 133
Query: 84 SVNVTIRFVKQFE 96
+ V + VK
Sbjct: 134 NKLVNVLKVKDLS 146
>gi|160936541|ref|ZP_02083908.1| hypothetical protein CLOBOL_01431 [Clostridium bolteae ATCC
BAA-613]
gi|158440332|gb|EDP18077.1| hypothetical protein CLOBOL_01431 [Clostridium bolteae ATCC
BAA-613]
Length = 761
Score = 40.8 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEKLS 84
I + +G+ + + E I+I ++ R+ A + D + + +K+
Sbjct: 690 IFANNRIGMFADISKVFTEKQIDITSMNV-RTSKQGKATIIMTFDIHGTDELNRLTDKIR 748
Query: 85 VNVTIRFV 92
+ +
Sbjct: 749 QIEGVLDI 756
>gi|14520822|ref|NP_126297.1| hypothetical protein PAB2435 [Pyrococcus abyssi GE5]
gi|5458038|emb|CAB49528.1| Regulator of amino acid metabolism, putative, containing act domain
[Pyrococcus abyssi GE5]
Length = 166
Score = 40.8 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 27/76 (35%), Gaps = 8/76 (10%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL 76
+++ I GI+ V + + GINI + A + + I
Sbjct: 96 IEIEPEPRAI--------GILAKVAQKIADRGINIVQAIAEDPELYPEATLTIITEKPIP 147
Query: 77 NSVLEKLSVNVTIRFV 92
++ +LS ++ +
Sbjct: 148 GDLINELSKLEGVKRI 163
>gi|284045032|ref|YP_003395372.1| acetolactate synthase, small subunit [Conexibacter woesei DSM
14684]
gi|283949253|gb|ADB51997.1| acetolactate synthase, small subunit [Conexibacter woesei DSM
14684]
Length = 185
Score = 40.8 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 39/99 (39%), Gaps = 9/99 (9%)
Query: 5 GKPRFIKIQEINFDVDIG-----RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRS 59
G I + + + G + ++ I+ + G++ V + NI +G +
Sbjct: 5 GTQELISLDD--LEAAGGLMTGRKHILSILVENKPGVLTRVAGLFARRAFNIDTLAVGPT 62
Query: 60 QSTEHAISFLCIDGSIL--NSVLEKLSVNVTIRFVKQFE 96
+ L +DG++ + V ++L V + ++ E
Sbjct: 63 DDPSISRITLTLDGAVHPIDQVTKQLHKLVNVLKIRDLE 101
>gi|218885891|ref|YP_002435212.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756845|gb|ACL07744.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 722
Score = 40.8 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 6/89 (6%)
Query: 8 RFIKI--QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIA--HFHLGRSQSTE 63
R I + R+ + N G++ + +L E +NI + +E
Sbjct: 628 RLISVFWDGQEDKPYPARIHLVCRNE--KGVLAQITALLAEENVNIDSGNMRSMVDGKSE 685
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ D + L L+KL T+ V
Sbjct: 686 VDFTVEVRDVAHLYRALDKLRKLPTVVEV 714
>gi|171692767|ref|XP_001911308.1| hypothetical protein [Podospora anserina S mat+]
gi|170946332|emb|CAP73133.1| unnamed protein product [Podospora anserina S mat+]
Length = 468
Score = 40.8 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 7/72 (9%), Positives = 26/72 (36%), Gaps = 5/72 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I ++ ++ G++ V ILG++ ++ + A + ++++
Sbjct: 398 RIIYIHRNVPGVLRRVNEILGDHNVD----KQISDSKGDIAYLMADVSDVRPED-IKEIR 452
Query: 85 VNVTIRFVKQFE 96
++ +
Sbjct: 453 DSLDGLSSRILT 464
>gi|159900961|ref|YP_001547208.1| acetolactate synthase small subunit [Herpetosiphon aurantiacus
ATCC 23779]
gi|159894000|gb|ABX07080.1| acetolactate synthase, small subunit [Herpetosiphon aurantiacus
ATCC 23779]
Length = 173
Score = 40.8 bits (95), Expect = 0.063, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
+ + D G++ ++ G NI +G +++ + L +DG V++
Sbjct: 3 HTLVALLRDQPGVLNRSVSLFRRRGFNIESLTVGHTETPGISRMTLVVDGDTTSVEQVIK 62
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 63 QLYKLIDVLKV 73
>gi|39996793|ref|NP_952744.1| homoserine dehydrogenase [Geobacter sulfurreducens PCA]
gi|39983681|gb|AAR35071.1| homoserine dehydrogenase [Geobacter sulfurreducens PCA]
gi|298505804|gb|ADI84527.1| homoserine dehydrogenase [Geobacter sulfurreducens KN400]
Length = 436
Score = 40.8 bits (95), Expect = 0.063, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 21/66 (31%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
G+ + D G++ + LG+Y I+I + E + + +
Sbjct: 352 GKYYLRFSAVDKPGVLAKISGALGKYDISIESMIQKGRSAGESVPIVIMTHEAREKDIRA 411
Query: 82 KLSVNV 87
L
Sbjct: 412 ALEEID 417
>gi|297799732|ref|XP_002867750.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
gi|297313586|gb|EFH44009.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 40.8 bits (95), Expect = 0.063, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 26/105 (24%)
Query: 13 QEINFDVDIGRLMIC------------------IVNADILGIVVFVGNILGEYGINIAHF 54
+ R + + AD G++ V +L E G+NIA
Sbjct: 294 DGHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRVLRENGLNIARA 353
Query: 55 HLGRSQSTEHAISFLCIDGS----ILNSVLEKLSVNVTI--RFVK 93
+ A + + + I +++ + + I VK
Sbjct: 354 EISTKD--GVARNVFYVTDANGNLIDPEIIQSIREKIGIDDLSVK 396
>gi|293553292|ref|ZP_06673928.1| D-3-phosphoglycerate dehydrogenase [Enterococcus faecium E1039]
gi|291602516|gb|EFF32732.1| D-3-phosphoglycerate dehydrogenase [Enterococcus faecium E1039]
Length = 386
Score = 40.8 bits (95), Expect = 0.064, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG---SILNS 78
I I+ + ++L E + IA R+ EH + ID LN
Sbjct: 306 APFRFTIFYQKKTNILAEIFSLLNENELAIADI--SRNHKNEHVYILIDIDSTAFEQLNQ 363
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L +R V+ +
Sbjct: 364 VKQQLEKISGVRKVRLLK 381
>gi|284166035|ref|YP_003404314.1| acetolactate synthase, small subunit [Haloterrigena turkmenica DSM
5511]
gi|284015690|gb|ADB61641.1| acetolactate synthase, small subunit [Haloterrigena turkmenica DSM
5511]
Length = 221
Score = 40.8 bits (95), Expect = 0.064, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 5/91 (5%)
Query: 10 IKIQEINFDVDIGRLMICIVN--ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
I+I + I A G++ V + NI +G ++ + A
Sbjct: 25 IRIDP-EVEATHEPRRTVISALVAHEPGVLSDVSGLFSRRQFNIESLTVGPTKDEDRARI 83
Query: 68 FLCIDGSIL--NSVLEKLSVNVTIRFVKQFE 96
+ ++ + + ++L V + V++ E
Sbjct: 84 TVVVEEPDPGIDQIKKQLRKLVPVISVRELE 114
>gi|170720403|ref|YP_001748091.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas putida W619]
gi|169758406|gb|ACA71722.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudomonas putida W619]
Length = 746
Score = 40.8 bits (95), Expect = 0.064, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEK 82
I I D G++ V +L IN+ + ++ A+ L I+ L++ +L +
Sbjct: 671 IVIRAYDRPGLLRDVSQVLLNEKINVLAVNTRSNKEDNTALMSLTIEIPGLDALGRLLGR 730
Query: 83 LSVNVTIRFVK 93
+S I +
Sbjct: 731 ISQLPNIIETR 741
>gi|71908005|ref|YP_285592.1| homoserine dehydrogenase [Dechloromonas aromatica RCB]
gi|71847626|gb|AAZ47122.1| homoserine dehydrogenase [Dechloromonas aromatica RCB]
Length = 436
Score = 40.8 bits (95), Expect = 0.064, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 26/81 (32%), Gaps = 5/81 (6%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE- 81
+ + D G++ + IL + GI+I + E + + S +
Sbjct: 353 GYYLRLRVEDKPGVLADITRILADQGISIDAMLQREPEEGEGETDIIILTHICKESAADA 412
Query: 82 KLSVNVTIR----FVKQFEFN 98
++ + VK+
Sbjct: 413 AIAKIEGLSAQKGKVKRIRLE 433
>gi|69245330|ref|ZP_00603374.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic
region:D-isomer specific 2-hydroxyacid dehydrogenase,
NAD-binding [Enterococcus faecium DO]
gi|257882258|ref|ZP_05661911.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
1,231,502]
gi|257891113|ref|ZP_05670766.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
1,231,410]
gi|257893927|ref|ZP_05673580.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
1,231,408]
gi|258614648|ref|ZP_05712418.1| D-3-phosphoglycerate dehydrogenase [Enterococcus faecium DO]
gi|260560364|ref|ZP_05832540.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
C68]
gi|293563023|ref|ZP_06677489.1| D-3-phosphoglycerate dehydrogenase [Enterococcus faecium E1162]
gi|293567684|ref|ZP_06679027.1| D-3-phosphoglycerate dehydrogenase [Enterococcus faecium E1071]
gi|294623079|ref|ZP_06701965.1| D-3-phosphoglycerate dehydrogenase [Enterococcus faecium U0317]
gi|314938327|ref|ZP_07845619.1| 4-phosphoerythronate dehydrogenase [Enterococcus faecium TX0133a04]
gi|314941796|ref|ZP_07848672.1| 4-phosphoerythronate dehydrogenase [Enterococcus faecium TX0133C]
gi|314948652|ref|ZP_07852026.1| 4-phosphoerythronate dehydrogenase [Enterococcus faecium TX0082]
gi|314952565|ref|ZP_07855561.1| 4-phosphoerythronate dehydrogenase [Enterococcus faecium TX0133A]
gi|314992269|ref|ZP_07857705.1| 4-phosphoerythronate dehydrogenase [Enterococcus faecium TX0133B]
gi|314997480|ref|ZP_07862427.1| 4-phosphoerythronate dehydrogenase [Enterococcus faecium TX0133a01]
gi|68195860|gb|EAN10295.1| D-isomer specific 2-hydroxyacid dehydrogenase, catalytic
region:D-isomer specific 2-hydroxyacid dehydrogenase,
NAD-binding [Enterococcus faecium DO]
gi|257817916|gb|EEV45244.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
1,231,502]
gi|257827473|gb|EEV54099.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
1,231,410]
gi|257830306|gb|EEV56913.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
1,231,408]
gi|260073709|gb|EEW62035.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
C68]
gi|291589619|gb|EFF21424.1| D-3-phosphoglycerate dehydrogenase [Enterococcus faecium E1071]
gi|291597448|gb|EFF28613.1| D-3-phosphoglycerate dehydrogenase [Enterococcus faecium U0317]
gi|291604937|gb|EFF34405.1| D-3-phosphoglycerate dehydrogenase [Enterococcus faecium E1162]
gi|313588489|gb|EFR67334.1| 4-phosphoerythronate dehydrogenase [Enterococcus faecium TX0133a01]
gi|313593174|gb|EFR72019.1| 4-phosphoerythronate dehydrogenase [Enterococcus faecium TX0133B]
gi|313595334|gb|EFR74179.1| 4-phosphoerythronate dehydrogenase [Enterococcus faecium TX0133A]
gi|313599412|gb|EFR78255.1| 4-phosphoerythronate dehydrogenase [Enterococcus faecium TX0133C]
gi|313642325|gb|EFS06905.1| 4-phosphoerythronate dehydrogenase [Enterococcus faecium TX0133a04]
gi|313644905|gb|EFS09485.1| 4-phosphoerythronate dehydrogenase [Enterococcus faecium TX0082]
Length = 386
Score = 40.8 bits (95), Expect = 0.064, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG---SILNS 78
I I+ + ++L E + IA R+ EH + ID LN
Sbjct: 306 APFRFTIFYQKKTNILAEIFSLLNENELAIADI--SRNHKNEHVYILIDIDSTDFEQLNQ 363
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L +R V+ +
Sbjct: 364 VKQQLEKISGVRKVRLLK 381
>gi|317508333|ref|ZP_07966009.1| acetolactate synthase [Segniliparus rugosus ATCC BAA-974]
gi|316253373|gb|EFV12767.1| acetolactate synthase [Segniliparus rugosus ATCC BAA-974]
Length = 176
Score = 40.8 bits (95), Expect = 0.064, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 19 VDIGRLMIC-IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSI 75
I I+ D G++ V ++ G NI +G ++ + + ++ +
Sbjct: 5 ATPSETRILSILVEDKPGVLARVSSLFSRRGFNIDSLAVGPTEQPNISRMTVTVTVEEPV 64
Query: 76 LNSVLEKLSVNVTIRFV 92
L ++++L+ V + +
Sbjct: 65 LEQIVKQLNKLVNVIKI 81
>gi|282165369|ref|YP_003357754.1| acetolactate synthase small subunit [Methanocella paludicola
SANAE]
gi|282157683|dbj|BAI62771.1| acetolactate synthase small subunit [Methanocella paludicola
SANAE]
Length = 170
Score = 40.8 bits (95), Expect = 0.065, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSV 79
+ ++ A+ G++ V + G NI +G +++ + + + + D ++ V
Sbjct: 6 NYHTLSVLVANKPGVLTHVSGLFSRRGYNIDSLTVGVTENPDISRMTIVVHGDEHVIEQV 65
Query: 80 LEKLSVNVTIRFV 92
++L+ + I V
Sbjct: 66 TKQLNKLIDIIKV 78
>gi|134102595|ref|YP_001108256.1| acetolactate synthase 3 regulatory subunit [Saccharopolyspora
erythraea NRRL 2338]
gi|291004720|ref|ZP_06562693.1| acetolactate synthase 3 regulatory subunit [Saccharopolyspora
erythraea NRRL 2338]
gi|133915218|emb|CAM05331.1| acetolactate synthase small subunit [Saccharopolyspora erythraea
NRRL 2338]
Length = 168
Score = 40.8 bits (95), Expect = 0.065, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNS 78
+ R + ++ ++ G++ V + NI +G ++ + + + ++ L
Sbjct: 1 MSRHTLSVLVENVPGVLARVSGLFSRRSFNIESLAVGPTEHPDISRMTIVVSVEDQPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ + + + + E
Sbjct: 61 VTKQLNKLINVIKIVELE 78
>gi|153808851|ref|ZP_01961519.1| hypothetical protein BACCAC_03151 [Bacteroides caccae ATCC 43185]
gi|149128677|gb|EDM19895.1| hypothetical protein BACCAC_03151 [Bacteroides caccae ATCC 43185]
Length = 201
Score = 40.8 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + +I G++ V + INI ++ S + D + V++
Sbjct: 21 YTIIVHSENIAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDTIEKVVK 80
Query: 82 KLSVNVTIRFVKQFE 96
++ + + F
Sbjct: 81 QIEKKIDVIQAHYFT 95
>gi|57641162|ref|YP_183640.1| amino acid metabolism regulator [Thermococcus kodakarensis KOD1]
gi|57159486|dbj|BAD85416.1| predicted regulator of amino acid metabolism, containing ACT domain
[Thermococcus kodakarensis KOD1]
Length = 166
Score = 40.8 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 23/58 (39%)
Query: 35 GIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
GI+ + + E+ INI + A + + I ++ +LS ++ +
Sbjct: 106 GILAKIAQKIAEHDINIIQVVAEDPELYPEATLTIITERPIPGDLINELSKLEGVKRI 163
>gi|261208302|ref|ZP_05922975.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
TC 6]
gi|289565610|ref|ZP_06446056.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
D344SRF]
gi|294614297|ref|ZP_06694215.1| D-3-phosphoglycerate dehydrogenase [Enterococcus faecium E1636]
gi|294619158|ref|ZP_06698646.1| D-3-phosphoglycerate dehydrogenase [Enterococcus faecium E1679]
gi|260077559|gb|EEW65277.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
TC 6]
gi|289162578|gb|EFD10432.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
D344SRF]
gi|291592851|gb|EFF24442.1| D-3-phosphoglycerate dehydrogenase [Enterococcus faecium E1636]
gi|291594583|gb|EFF25972.1| D-3-phosphoglycerate dehydrogenase [Enterococcus faecium E1679]
Length = 386
Score = 40.8 bits (95), Expect = 0.067, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG---SILNS 78
I I+ + ++L E + IA R+ EH + ID LN
Sbjct: 306 APFRFTIFYQKKTNILAEIFSLLNENELAIADI--SRNHKNEHVYILIDIDSTDFEQLNQ 363
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L +R V+ +
Sbjct: 364 VKQQLEKISGVRKVRLLK 381
>gi|104780553|ref|YP_607051.1| GTP pyrophosphokinase RelA [Pseudomonas entomophila L48]
gi|95109540|emb|CAK14241.1| putative GTP pyrophosphokinase RelA [Pseudomonas entomophila L48]
Length = 746
Score = 40.8 bits (95), Expect = 0.067, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEK 82
I I D G++ V +L IN+ + ++ A+ L I+ L++ +L +
Sbjct: 671 IVIRAYDRPGLLRDVSQVLLNEKINVLAVNTRSNKEDNTALMSLTIEIPGLDALGRLLGR 730
Query: 83 LSVNVTIRFVK 93
+S I +
Sbjct: 731 ISQLPNIIETR 741
>gi|17232119|ref|NP_488667.1| acetolactate synthase 3 regulatory subunit [Nostoc sp. PCC 7120]
gi|75908256|ref|YP_322552.1| acetolactate synthase 3 regulatory subunit [Anabaena variabilis
ATCC 29413]
gi|17133764|dbj|BAB76326.1| acetolactate synthase [Nostoc sp. PCC 7120]
gi|75701981|gb|ABA21657.1| acetolactate synthase, small subunit [Anabaena variabilis ATCC
29413]
Length = 182
Score = 40.8 bits (95), Expect = 0.067, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + ++ G NI +G + + + + D ++ + +
Sbjct: 12 HTLSVLVEDEAGVLSRIASLFARRGFNIESLAVGSGEEGGVSRITMVVPGDDRVIEQLTK 71
Query: 82 KLSVNVTIRFVKQFE 96
+L V + V+
Sbjct: 72 QLYKLVNVLKVQDIT 86
>gi|254418225|ref|ZP_05031949.1| RelA/SpoT family protein [Brevundimonas sp. BAL3]
gi|196184402|gb|EDX79378.1| RelA/SpoT family protein [Brevundimonas sp. BAL3]
Length = 688
Score = 40.8 bits (95), Expect = 0.068, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAH--FHLGRSQSTEHAISFLCIDGSILNSVLEK 82
+ + G++ V ++GE G NI + + + I D ++
Sbjct: 614 RLNATIRNAPGVLGQVTTLIGEAGGNIINLSMAYRQQDFFDVTIDVEVEDAKHATMLMAA 673
Query: 83 LSVNVTIRFV 92
L N ++ V
Sbjct: 674 LRANPSVDNV 683
>gi|240277339|gb|EER40848.1| D-3-phosphoglycerate dehydrogenase [Ajellomyces capsulatus H143]
Length = 481
Score = 40.8 bits (95), Expect = 0.068, Method: Composition-based stats.
Identities = 8/79 (10%), Positives = 26/79 (32%), Gaps = 7/79 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ + ++ +I G++ V IL ++ ++ + A I + +
Sbjct: 406 EPNHGRVIFIHQNIPGVLRKVNEILSDHNVD----KQMTDSRGDVAYLMADISDVHTSDI 461
Query: 80 LE---KLSVNVTIRFVKQF 95
+ +L + +
Sbjct: 462 KDLYNRLENLPSRIMTRIL 480
>gi|289829824|ref|ZP_06547339.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
Length = 112
Score = 40.8 bits (95), Expect = 0.068, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 19 RIVE--AVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIA 76
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 77 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 110
>gi|4887755|gb|AAD32291.1| putative acetolactate synthase [Arabidopsis thaliana]
Length = 484
Score = 40.8 bits (95), Expect = 0.068, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 27/69 (39%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D G++ + + G NI +G ++ +C +L V+E+L
Sbjct: 87 HTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNRDKALFTIVVCGTERVLQQVIEQL 146
Query: 84 SVNVTIRFV 92
V + V
Sbjct: 147 QKLVNVLKV 155
>gi|206901109|ref|YP_002251080.1| homoserine dehydrogenase [Dictyoglomus thermophilum H-6-12]
gi|206740212|gb|ACI19270.1| homoserine dehydrogenase [Dictyoglomus thermophilum H-6-12]
Length = 424
Score = 40.8 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
D G++ + ILGE I+I+ S+ A + + ++++ +
Sbjct: 351 KDQPGVLAQIAKILGENNISISSVVQKETSEKEGKAELVILTHKTYEKNMIKAIKEIK 408
>gi|30685071|ref|NP_850172.1| acetolactate synthase small subunit, putative [Arabidopsis
thaliana]
gi|16604523|gb|AAL24267.1| At2g31810/F20M17.15 [Arabidopsis thaliana]
gi|21655295|gb|AAM65359.1| At2g31810/F20M17.15 [Arabidopsis thaliana]
gi|330253492|gb|AEC08586.1| ACT domain-containing small subunit of acetolactate synthase
protein [Arabidopsis thaliana]
Length = 491
Score = 40.8 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 27/69 (39%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D G++ + + G NI +G ++ +C +L V+E+L
Sbjct: 87 HTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNRDKALFTIVVCGTERVLQQVIEQL 146
Query: 84 SVNVTIRFV 92
V + V
Sbjct: 147 QKLVNVLKV 155
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVL 80
+ ++ DI G++ V + G NI +G +++ + I D S+ ++
Sbjct: 320 HTLSLLVNDIPGVLNIVTGVFARRGYNIQSLAVGHAETKGISRITTVIPATDESVSK-LV 378
Query: 81 EKLSVNVTIRFVKQFE 96
++L V + V
Sbjct: 379 QQLYKLVDVHEVHDLT 394
>gi|257885455|ref|ZP_05665108.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
1,231,501]
gi|257821311|gb|EEV48441.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
1,231,501]
Length = 386
Score = 40.8 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 5/75 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG---SILNSVLE 81
I I+ + ++L E + IA R+ EH + ID LN V +
Sbjct: 309 RFTIFYQKKTNILAEIFSLLNENELAIADI--SRNHKNEHVYILIDIDSTDFEQLNQVKQ 366
Query: 82 KLSVNVTIRFVKQFE 96
+L +R V+ +
Sbjct: 367 QLEKISGVRKVRLLK 381
>gi|270283852|ref|ZP_05965102.2| GTP diphosphokinase [Bifidobacterium gallicum DSM 20093]
gi|270277566|gb|EFA23420.1| GTP diphosphokinase [Bifidobacterium gallicum DSM 20093]
Length = 789
Score = 40.8 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
I + D ++ V +L ++G+NI G + SF D LN+VL
Sbjct: 696 RIQVEALDRPHLLSDVTRVLSDHGVNILSGTIQTGSDRVATSQFSFEMADPQHLNTVLAA 755
Query: 83 LSVNVTIRFV 92
+ + V
Sbjct: 756 VRKIEGVFDV 765
>gi|288932411|ref|YP_003436471.1| amino acid-binding ACT domain protein [Ferroglobus placidus DSM
10642]
gi|288894659|gb|ADC66196.1| amino acid-binding ACT domain protein [Ferroglobus placidus DSM
10642]
Length = 219
Score = 40.8 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST---EHAISFLCIDGSILNSVLEK 82
+ I+ + +G++ + I+ E+ NI + + +A+ + IDG ++EK
Sbjct: 5 LRIIAKNQIGVLRDLTTIIAEHNGNITYAQTFIIKHGEYRGNALIYFEIDGGEFEKIVEK 64
Query: 83 LSVNVTIRFV 92
+ T+ V
Sbjct: 65 IKELPTVIEV 74
>gi|219848152|ref|YP_002462585.1| acetolactate synthase small subunit [Chloroflexus aggregans DSM
9485]
gi|219542411|gb|ACL24149.1| acetolactate synthase, small subunit [Chloroflexus aggregans DSM
9485]
Length = 179
Score = 40.8 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 30/69 (43%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D G++ V ++ G NI +G S++ + + ++ + V+++L
Sbjct: 4 HTIVALLQDRPGVLSRVIGLIRRRGYNIESLAVGHSETPGVSRLTIVVESEDVEQVVKQL 63
Query: 84 SVNVTIRFV 92
+ + V
Sbjct: 64 YRLIEVLKV 72
>gi|148556429|ref|YP_001264011.1| (p)ppGpp synthetase I SpoT/RelA [Sphingomonas wittichii RW1]
gi|148501619|gb|ABQ69873.1| (p)ppGpp synthetase I, SpoT/RelA [Sphingomonas wittichii RW1]
Length = 701
Score = 40.8 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 8/78 (10%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-- 77
D G + ++ + G + + ILG + NI + L + A + + +
Sbjct: 621 DGGTARLTVIVKNEPGALGIMSGILGAHHANIVNLSLSHR---DAAFHTYDVTIEVHDVQ 677
Query: 78 ---SVLEKLSVNVTIRFV 92
++ L +
Sbjct: 678 HLMKIIAALRAADAVSQA 695
>gi|315499951|ref|YP_004088754.1| (p)ppgpp synthetase i, spot/rela [Asticcacaulis excentricus CB 48]
gi|315417963|gb|ADU14603.1| (p)ppGpp synthetase I, SpoT/RelA [Asticcacaulis excentricus CB 48]
Length = 817
Score = 40.8 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 24/69 (34%), Gaps = 5/69 (7%)
Query: 30 NADILGIVVFVGNILGEYGINIAHFHLGRSQST--EHAISFLCIDGSILNSVLEKLS--- 84
+ G++ V ++GE NI + L Q + +D L ++ +
Sbjct: 748 MRNKPGVLGQVCTLIGEAKGNIVNIRLSNQQVDFLDAEFEVEVLDARHLTNITAAIRTNP 807
Query: 85 VNVTIRFVK 93
+ ++
Sbjct: 808 SVEGVERIR 816
>gi|30685076|ref|NP_850174.1| acetolactate synthase small subunit, putative [Arabidopsis
thaliana]
gi|330253494|gb|AEC08588.1| ACT domain-containing small subunit of acetolactate synthase
protein [Arabidopsis thaliana]
Length = 469
Score = 40.8 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 27/69 (39%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D G++ + + G NI +G ++ +C +L V+E+L
Sbjct: 87 HTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNRDKALFTIVVCGTERVLQQVIEQL 146
Query: 84 SVNVTIRFV 92
V + V
Sbjct: 147 QKLVNVLKV 155
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVL 80
+ ++ DI G++ V + G NI +G +++ + I D S+ ++
Sbjct: 320 HTLSLLVNDIPGVLNIVTGVFARRGYNIQSLAVGHAETKGISRITTVIPATDESVSK-LV 378
Query: 81 EKLSVNVTIRFVKQFE 96
++L V + V
Sbjct: 379 QQLYKLVDVHEVHDLT 394
>gi|320537942|ref|ZP_08037849.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Treponema phagedenis F0421]
gi|320145195|gb|EFW36904.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Treponema phagedenis F0421]
Length = 161
Score = 40.4 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 6/36 (16%), Positives = 13/36 (36%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVV 38
G KI + + + +V+ D G++
Sbjct: 124 GGGNIIVTKIDGMAVKITGQSPTLVVVHKDTPGMIA 159
>gi|311898370|dbj|BAJ30778.1| putative homoserine dehydrogenase [Kitasatospora setae KM-6054]
Length = 429
Score = 40.4 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNV 87
D G++ V ++ E+G++I + + A + + ++ ++KL
Sbjct: 358 DDRAGVLAQVASVFAEHGVSIDT--VRQQGRDGDAALVVVTHRATDAALSATVDKLRALD 415
Query: 88 TIRFVKQF 95
++R V
Sbjct: 416 SVRDVASI 423
>gi|184201168|ref|YP_001855375.1| prephenate dehydrogenase [Kocuria rhizophila DC2201]
gi|183581398|dbj|BAG29869.1| prephenate dehydrogenase [Kocuria rhizophila DC2201]
Length = 372
Score = 40.4 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 23/54 (42%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
D G + + +GE G+N+ L S + + +D S ++E+L
Sbjct: 311 DDTPGTIARLLTEIGEIGVNLEDMRLEHSPGQPVGLVTVSVDPSRHADLVEELQ 364
>gi|149914301|ref|ZP_01902832.1| DNA primase [Roseobacter sp. AzwK-3b]
gi|149811820|gb|EDM71653.1| DNA primase [Roseobacter sp. AzwK-3b]
Length = 432
Score = 40.4 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSIL 76
+ + D G + V +LGE GI+I R T + + S L
Sbjct: 348 ATPAPYYLRMALEDKPGALAKVAAVLGEAGISIDRMRQYRHDDTTAPVLIVTHKTTRSAL 407
Query: 77 NSVLEKLSVNVTI 89
++ L+ +S +
Sbjct: 408 DAALDAMSRLDVV 420
>gi|302389921|ref|YP_003825742.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosediminibacter oceani DSM
16646]
gi|302200549|gb|ADL08119.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosediminibacter oceani DSM
16646]
Length = 721
Score = 40.4 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 18/101 (17%)
Query: 5 GKPRFIKI--QEIN-----FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLG 57
+ R I++ +++ D G++ V N LG+ I +
Sbjct: 626 DRERLIEVKWDGFKETSYPVEIEASAY-------DRPGVLSDVLNTLGDMKTTIDSVN-A 677
Query: 58 RSQSTEHAISFLCI---DGSILNSVLEKLSVNVTIRFVKQF 95
RS A+ L + D L ++++KL I VK+
Sbjct: 678 RSSKNGIAVIDLVLEITDKQHLENIMQKLKKINGIFEVKRV 718
>gi|294140001|ref|YP_003555979.1| protein-P-II uridylyltransferase [Shewanella violacea DSS12]
gi|293326470|dbj|BAJ01201.1| protein-P-II uridylyltransferase [Shewanella violacea DSS12]
Length = 859
Score = 40.4 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 8/79 (10%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSV 79
G + + D + V +L IN+ A + + L DGS
Sbjct: 674 GGTELFVYGQDKPKLFATVMTLLDNKNINVHDASIMTSKDNYALDSFVILEQDGSP---- 729
Query: 80 LEKLSVNVTIRF--VKQFE 96
+ +++ I+ VK
Sbjct: 730 VAQIARIQGIKKALVKALS 748
>gi|257069031|ref|YP_003155286.1| acetolactate synthase, small subunit [Brachybacterium faecium DSM
4810]
gi|256559849|gb|ACU85696.1| acetolactate synthase, small subunit [Brachybacterium faecium DSM
4810]
Length = 171
Score = 40.4 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSIL 76
+ + ++ + G++ V + G NI+ +G ++ E + + +D L
Sbjct: 1 MTPDSQTLSVLVENKPGVLTRVTALFSRRGYNISSLAVGPTEHPEISRITVVVDVDQRRL 60
Query: 77 NSVLEKLSVNVTIRFVKQF 95
+ ++L+ V + + Q
Sbjct: 61 EQITKQLNKLVNVLKIVQL 79
>gi|312901193|ref|ZP_07760478.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0470]
gi|311291712|gb|EFQ70268.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0470]
Length = 231
Score = 40.4 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 33/95 (34%), Gaps = 5/95 (5%)
Query: 3 SDGKPRF--IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G I++ N + ++ ++N + ++ + L + NI + R
Sbjct: 140 GGGTIEVKYIELDGFNVQLHGPLPILLVINQEEQ-VMQAFKDTLQKN--NIQVNAVSRYV 196
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ +D + ++SV E+L +
Sbjct: 197 EGNQILFIFDLDSAPISSVKEQLFSLDDTSKIILL 231
>gi|296133104|ref|YP_003640351.1| Prephenate dehydrogenase [Thermincola sp. JR]
gi|296031682|gb|ADG82450.1| Prephenate dehydrogenase [Thermincola potens JR]
Length = 369
Score = 40.4 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
I I D G++ + ++LGE GINI+ + R + E L +
Sbjct: 300 IIIYVPDRPGVIAGIASLLGEAGINISDIEIMRVKEGEGGSIRLGFGSAEDQE 352
>gi|293571444|ref|ZP_06682471.1| hypothetical protein EfmE980_1220 [Enterococcus faecium E980]
gi|291608449|gb|EFF37744.1| hypothetical protein EfmE980_1220 [Enterococcus faecium E980]
Length = 386
Score = 40.4 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG---SILNS 78
I I+ + ++L E + IA R+ EH + ID LN
Sbjct: 306 APFRFTIFYQKKTNILAEIFSLLNENELAIADI--SRNHKNEHVYILIDIDSTDFEQLNQ 363
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L +R V+ +
Sbjct: 364 VKQQLEKISGVRKVRLLK 381
>gi|239624473|ref|ZP_04667504.1| (p)ppGpp synthetase I [Clostridiales bacterium 1_7_47_FAA]
gi|239520859|gb|EEQ60725.1| (p)ppGpp synthetase I [Clostridiales bacterium 1_7_47FAA]
Length = 765
Score = 40.4 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEKLS 84
I + +G+ + + E I+I ++ R+ A + D + +K+
Sbjct: 694 IFANNRIGMFADISKVFTEKQIDITSMNV-RTSKQGKATIIMTFDIHGTEELNRLTDKIR 752
Query: 85 VNVTIRFV 92
+ +
Sbjct: 753 QIEGVLDI 760
>gi|255547430|ref|XP_002514772.1| acetolactate synthase, putative [Ricinus communis]
gi|223545823|gb|EEF47326.1| acetolactate synthase, putative [Ricinus communis]
Length = 531
Score = 40.4 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+I I + D GI+ + + G NI + ++ +
Sbjct: 117 QINSFRV----QTHTISVFVGDESGIINRIAGVFARRGFNIESLAVCLNEDKALFTIVVR 172
Query: 71 IDGSILNSVLEKLSVNVTIRFV 92
++L V+E+L+ V++ V
Sbjct: 173 GTDNVLRQVVEQLNKLVSVIKV 194
Score = 34.2 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE---HAISFLCIDGSILNSVL 80
+ ++ D G++ + ++ G NI +G ++ + SI VL
Sbjct: 362 HTLSMLVNDSPGVLNMITGVISRRGYNIQSLAVGSAEREGLSRITTVIPGTNESIGKLVL 421
Query: 81 EKLSVNVTIRFVKQFE 96
+ L + + V+
Sbjct: 422 Q-LHKLIDMHEVRDIT 436
>gi|91217850|ref|ZP_01254805.1| D-3-phosphoglycerate dehydrogenase [Psychroflexus torquis ATCC
700755]
gi|91184051|gb|EAS70439.1| D-3-phosphoglycerate dehydrogenase [Psychroflexus torquis ATCC
700755]
Length = 388
Score = 40.4 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 25/59 (42%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
I E++ I ++ ++ G++ + + + + +NI +L + + + +
Sbjct: 328 SIPELSLPKIEDTHRILHIHKNVSGVLSEINSKISKLDVNILGQYLSTNLEVGYVVLDI 386
>gi|302554158|ref|ZP_07306500.1| homoserine dehydrogenase [Streptomyces viridochromogenes DSM 40736]
gi|302471776|gb|EFL34869.1| homoserine dehydrogenase [Streptomyces viridochromogenes DSM 40736]
Length = 429
Score = 40.4 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 10/87 (11%)
Query: 17 FDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI 71
V ++ + D G++ V + E+G++I + +S A +
Sbjct: 339 LPVSPMGDVVTRYHISLDVADKPGVLAQVATVFAEHGVSIDT--VRQSGKDGEASLVVVT 396
Query: 72 DGSILNSV---LEKLSVNVTIRFVKQF 95
+ ++ +E L T+R V
Sbjct: 397 HRASDAALTGTVEALRKLDTVRGVASI 423
>gi|256426000|ref|YP_003126653.1| (p)ppGpp synthetase I, SpoT/RelA [Chitinophaga pinensis DSM 2588]
gi|256040908|gb|ACU64452.1| (p)ppGpp synthetase I, SpoT/RelA [Chitinophaga pinensis DSM 2588]
Length = 750
Score = 40.4 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 26 ICIVNADILGIVVFVGNIL-GEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
+ IV D +G++ + N++ GE +NIA L + + D L+ + E
Sbjct: 676 LRIVGMDDVGVIHKITNVISGELRVNIAG--LTIESREGLFEGLIKVFVHDKEELDELFE 733
Query: 82 KLSVNVTIRFVKQFE 96
KL I+ V + E
Sbjct: 734 KLKKLDGIQSVSRLE 748
>gi|284992467|ref|YP_003411021.1| amino acid-binding ACT domain-containing protein
[Geodermatophilus obscurus DSM 43160]
gi|284065712|gb|ADB76650.1| amino acid-binding ACT domain protein [Geodermatophilus obscurus
DSM 43160]
Length = 226
Score = 40.4 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 7/75 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI---LNSVLE 81
+ + D GI+ V LGE GI+I + S A+ + +D +S++
Sbjct: 6 RLVVP--DRPGILGAVATALGESGIDIVSVDVLERGSG-VAVDDIVVDLPPGRLPDSLIT 62
Query: 82 KLSVNVTIRFVKQFE 96
+ V+
Sbjct: 63 ASQRVPGV-QVESLR 76
>gi|83311604|ref|YP_421868.1| hypothetical protein amb2505 [Magnetospirillum magneticum AMB-1]
gi|82946445|dbj|BAE51309.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
Length = 178
Score = 40.4 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 21/75 (28%), Gaps = 5/75 (6%)
Query: 10 IKIQEINFDVD--IGR---LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
I ++ D + + D G+V + + GE+ NI R
Sbjct: 83 ISVRAFEMDAAHGPAGTITHRVVVSGGDRPGLVARLSEVFGEFQANIVRMDAQRLPEQGI 142
Query: 65 AISFLCIDGSILNSV 79
++ +
Sbjct: 143 YVTRFSVAIPARAEA 157
>gi|21223715|ref|NP_629494.1| homoserine dehydrogenase [Streptomyces coelicolor A3(2)]
gi|13276799|emb|CAC33918.1| homoserine dehydrogenase [Streptomyces coelicolor A3(2)]
Length = 429
Score = 40.4 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 10/87 (11%)
Query: 17 FDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI 71
V ++ + D G++ V + E+G++I + +S A +
Sbjct: 339 LPVSPMGDVVTRYHISLDVADKPGVLAQVATVFAEHGVSIDT--VRQSGKDGEASLVVVT 396
Query: 72 DGSILNSV---LEKLSVNVTIRFVKQF 95
+ ++ +E L T+R V
Sbjct: 397 HRASDAALGGTVEALRKLDTVRGVASI 423
>gi|302421008|ref|XP_003008334.1| D-3-phosphoglycerate dehydrogenase [Verticillium albo-atrum
VaMs.102]
gi|261351480|gb|EEY13908.1| D-3-phosphoglycerate dehydrogenase [Verticillium albo-atrum
VaMs.102]
Length = 431
Score = 40.4 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + D + + ++ ++ G++ V ILG + ++ + A
Sbjct: 347 VNLRSLTLD-EPDHARVIYIHQNVPGVLRKVNEILGNHNVD----KQITDSRGDIAYLMA 401
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ S+ S ++++S + +
Sbjct: 402 DV-SSVKASDIKEISDGLDSLSSRILT 427
>gi|56459912|ref|YP_155193.1| (p)ppGpp synthetase II [Idiomarina loihiensis L2TR]
gi|56178922|gb|AAV81644.1| (p)ppGpp synthetase II [Idiomarina loihiensis L2TR]
Length = 729
Score = 40.4 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 30/91 (32%), Gaps = 10/91 (10%)
Query: 17 FDVDIGRLM-------ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+V + + D G++ + ++L +A ++ A L
Sbjct: 637 IEVSWSGHSKQEYRASLRVSALDRNGLLHDITSVLSNEKAAVAQMDSESDAKSQSATVVL 696
Query: 70 CI---DGSILNSVLEKLSVNVTIRFVKQFEF 97
+ D L+ + ++L + V++
Sbjct: 697 TLTVKDSDALSRITDRLRQVHGVEQVQRITL 727
>gi|289769086|ref|ZP_06528464.1| homoserine dehydrogenase [Streptomyces lividans TK24]
gi|289699285|gb|EFD66714.1| homoserine dehydrogenase [Streptomyces lividans TK24]
Length = 429
Score = 40.4 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 10/87 (11%)
Query: 17 FDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI 71
V ++ + D G++ V + E+G++I + +S A +
Sbjct: 339 LPVSPMGDVVTRYHISLDVADKPGVLAQVATVFAEHGVSIDT--VRQSGKDGEASLVVVT 396
Query: 72 DGSILNSV---LEKLSVNVTIRFVKQF 95
+ ++ +E L T+R V
Sbjct: 397 HRASDAALGGTVEALRKLDTVRGVASI 423
>gi|254382309|ref|ZP_04997669.1| homoserine dehydrogenase [Streptomyces sp. Mg1]
gi|194341214|gb|EDX22180.1| homoserine dehydrogenase [Streptomyces sp. Mg1]
Length = 433
Score = 40.4 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 10/90 (11%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFL 69
V ++ + D G++ V E+G++I GR + S +
Sbjct: 338 QLPVSPMGDVVTRYHISLDVADKPGVLAQVATTFAEHGVSIDTVRQQGRPDGVGNEASLV 397
Query: 70 CIDGSILNSVL----EKLSVNVTIRFVKQF 95
+ ++ L E L T+R V
Sbjct: 398 VVTHRAPDAALSGTVEALRKLDTVRGVASI 427
>gi|2501329|sp|Q59499|ILVH_MYCAV RecName: Full=Acetolactate synthase small subunit; AltName:
Full=Acetohydroxy-acid synthase small subunit;
Short=AHAS; Short=ALS
gi|1196508|gb|AAB38427.1| acetolactate synthase [Mycobacterium avium]
Length = 167
Score = 40.4 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
+ + ++ G++ V + G NI +G ++ + + + + + + L
Sbjct: 1 MSPQTHTLSVLVEAKPGVLARVAALFSRRGFNIESLAVGATEQKDMSRMTIVVSAEETPL 60
Query: 77 NSVLEKLSVNVTIRFVKQFE 96
+ ++L+ + + + + E
Sbjct: 61 EQITKQLNKLINVIKIVELE 80
>gi|29829460|ref|NP_824094.1| homoserine dehydrogenase [Streptomyces avermitilis MA-4680]
gi|29606568|dbj|BAC70629.1| putative homoserine dehydrogenase [Streptomyces avermitilis
MA-4680]
Length = 429
Score = 40.4 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNVT 88
D G++ V + E+G++I + + A + + S+ +E L T
Sbjct: 359 DKPGVLAQVATVFAEHGVSIDT--VRQQGKDGEASLVVVTHRASDASLSGTVEALRSLDT 416
Query: 89 IRFVKQF 95
+R V
Sbjct: 417 VRGVASI 423
>gi|18977674|ref|NP_579031.1| hypothetical protein PF1302 [Pyrococcus furiosus DSM 3638]
gi|18893404|gb|AAL81426.1| hypothetical protein PF1302 [Pyrococcus furiosus DSM 3638]
Length = 147
Score = 40.4 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL----NSVLEKLSVN 86
D G++ + ILG+ GINI +S + +D S + L
Sbjct: 76 EDKPGVLAKIAGILGKNGINILFNEAEELESLGLSAIVAVVDVSGAKISLKDLESTLKEI 135
Query: 87 VTIRFVKQFEFN 98
++ VK E
Sbjct: 136 NEVKEVKIVEIE 147
>gi|329115825|ref|ZP_08244542.1| 4-phosphoerythronate dehydrogenase [Streptococcus parauberis NCFD
2020]
gi|326906230|gb|EGE53144.1| 4-phosphoerythronate dehydrogenase [Streptococcus parauberis NCFD
2020]
Length = 391
Score = 40.4 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 10/90 (11%), Positives = 34/90 (37%), Gaps = 6/90 (6%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ ++ I ++N ++ IV + + + I ++ ++A + L
Sbjct: 304 VNFPNVHQELT-APYRITLINKNVPNIVAKISTAVSDMNI--NIANIINRSKGDYAYTLL 360
Query: 70 CIDGSIL---NSVLEKLSVNVTIRFVKQFE 96
+D + +++ + I V+
Sbjct: 361 DLDECDANKIDQLVQGFKDSDNIIKVRLIT 390
>gi|256785193|ref|ZP_05523624.1| homoserine dehydrogenase [Streptomyces lividans TK24]
Length = 430
Score = 40.4 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNVT 88
D G++ V + E+G++I + +S A + + ++ +E L T
Sbjct: 360 DKPGVLAQVATVFAEHGVSIDT--VRQSGKDGEASLVVVTHRASDAALGGTVEALRKLDT 417
Query: 89 IRFVKQF 95
+R V
Sbjct: 418 VRGVASI 424
>gi|257054943|ref|YP_003132775.1| acetolactate synthase 3 regulatory subunit [Saccharomonospora
viridis DSM 43017]
gi|256584815|gb|ACU95948.1| acetolactate synthase, small subunit [Saccharomonospora viridis
DSM 43017]
Length = 168
Score = 40.4 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ ++ G++ V + G NI +G +++ E + + ++ L V +
Sbjct: 4 HTLSVLVENVPGVLARVSGLFSRRGFNIESLAVGPTENPEVSRMTIVVAVEEQPLEQVTK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + + +
Sbjct: 64 QLNKLVNVIKIVELS 78
>gi|256824484|ref|YP_003148444.1| acetolactate synthase, small subunit [Kytococcus sedentarius DSM
20547]
gi|256687877|gb|ACV05679.1| acetolactate synthase, small subunit [Kytococcus sedentarius DSM
20547]
Length = 107
Score = 40.4 bits (94), Expect = 0.077, Method: Composition-based stats.
Identities = 8/80 (10%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVL 80
+ + + G++ V + NI + + + + + D + ++
Sbjct: 4 HALSVTAENHPGVLTKVCGLFATRDANIQYLAAAPTLQKGVSHMTIVVRANDQFDVEDLI 63
Query: 81 EKLSVNVTIRFVKQFEFNVD 100
+ + V+ + +VD
Sbjct: 64 THVEQVPHVVAVEAID-DVD 82
>gi|213423883|ref|ZP_03356863.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 116
Score = 40.4 bits (94), Expect = 0.077, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 23 RIVE--AVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIA 80
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 81 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 114
>gi|213648279|ref|ZP_03378332.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
Length = 139
Score = 40.4 bits (94), Expect = 0.077, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 46 RIVE--AVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIA 103
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 104 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 137
>gi|170748312|ref|YP_001754572.1| (p)ppGpp synthetase I, SpoT/RelA [Methylobacterium radiotolerans
JCM 2831]
gi|170654834|gb|ACB23889.1| (p)ppGpp synthetase I, SpoT/RelA [Methylobacterium radiotolerans
JCM 2831]
Length = 753
Score = 40.4 bits (94), Expect = 0.077, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SV 79
+ + + + G+ + ++ ++ NI + + R + + ID S+ + ++
Sbjct: 679 RLALKSINEPGVFAQIAQVIADHDGNIDNISMKRRTQD---FTDITIDLSVWDLQHLNAI 735
Query: 80 LEKLSVNVTIRFVKQFE 96
+ +L + V++
Sbjct: 736 IAELRGKRPVNSVERVN 752
>gi|111023448|ref|YP_706420.1| acetolactate synthase 3 regulatory subunit [Rhodococcus jostii
RHA1]
gi|110822978|gb|ABG98262.1| acetolactate synthase small subunit [Rhodococcus jostii RHA1]
Length = 167
Score = 40.4 bits (94), Expect = 0.077, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ D G++ V + G NI +G ++ E + + +D L V +
Sbjct: 5 HTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGGTELPEISRMTIVVTVDEFPLEQVTK 64
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 65 QLNKLINVIKI 75
>gi|325963766|ref|YP_004241672.1| acetolactate synthase, small subunit [Arthrobacter
phenanthrenivorans Sphe3]
gi|323469853|gb|ADX73538.1| acetolactate synthase, small subunit [Arthrobacter
phenanthrenivorans Sphe3]
Length = 170
Score = 40.4 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNS 78
+ R + ++ D G++ V ++ NI +G ++ + + DG ++
Sbjct: 1 MSRHTLSVLVEDKPGVLTRVASLFARRAFNINSLAVGPTEVPGISRMTVVVDADGDLIEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ + + + +
Sbjct: 61 VTKQLNKLINVIKIVELT 78
>gi|312137427|ref|YP_004004764.1| membrane-bound hydrogenase subunit ehbq [Methanothermus fervidus
DSM 2088]
gi|311225146|gb|ADP78002.1| membrane-bound hydrogenase subunit ehbQ [Methanothermus fervidus
DSM 2088]
Length = 218
Score = 40.4 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D G++ + IL + GINI A+ H+ +++ + + + + ++ +L + +
Sbjct: 12 DRPGVLNKITEILVKNGINITYANIHVLKNKHGKIYLELENVTD--PDKLINELKESEVV 69
Query: 90 RFV 92
V
Sbjct: 70 LDV 72
>gi|225875001|ref|YP_002756460.1| acetolactate synthase small subunit [Acidobacterium capsulatum
ATCC 51196]
gi|225793441|gb|ACO33531.1| acetolactate synthase small subunit [Acidobacterium capsulatum
ATCC 51196]
Length = 204
Score = 40.4 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLE 81
+ D G++ V ++ INI +GRS+ + + + + S ++
Sbjct: 3 HTFVALVEDKPGVLTRVASLFRRLNINIVSLTVGRSERADVSRITIVAEASPTAGHRIMA 62
Query: 82 KLSVNVTIRFV 92
L + V
Sbjct: 63 SLYKLENVLEV 73
>gi|119714521|ref|YP_921486.1| amino acid-binding ACT domain-containing protein [Nocardioides
sp. JS614]
gi|119535182|gb|ABL79799.1| amino acid-binding ACT domain protein [Nocardioides sp. JS614]
Length = 207
Score = 40.4 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCID-GSILNSVLEKLSVNVT 88
D+ G + + +GE G +I + + A+ FL +D G++ +SV+ ++
Sbjct: 11 DVPGSLGRLATAIGEAGGDIEAIEIVEKRHGGTAVDDVFLEMDPGAMPDSVVSTVNALDG 70
Query: 89 IR 90
+R
Sbjct: 71 VR 72
>gi|261345780|ref|ZP_05973424.1| GTP diphosphokinase [Providencia rustigianii DSM 4541]
gi|282566269|gb|EFB71804.1| GTP diphosphokinase [Providencia rustigianii DSM 4541]
Length = 743
Score = 40.4 bits (94), Expect = 0.079, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 12 IQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
I + + + + D G++ + IL +N+ + A +
Sbjct: 653 IDAVWGENYSSGYSLVVRVIANDRSGLLRDITTILANEKVNVLGVSSRSDVKQQLATIDM 712
Query: 70 CID---GSILNSVLEKLSVNVTIRFVK 93
I+ +L VL KL+ + K
Sbjct: 713 TIELYNIEVLGRVLTKLNQLPDVIEAK 739
>gi|28493173|ref|NP_787334.1| acetolactate synthase small subunit [Tropheryma whipplei str.
Twist]
gi|28476213|gb|AAO44303.1| acetolactate synthase small subunit [Tropheryma whipplei str.
Twist]
Length = 114
Score = 40.4 bits (94), Expect = 0.079, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRS-QSTEHAISFLCIDGSILNSVLEKL 83
I ++ D G++ + + G NI F R + + D ++ ++++L
Sbjct: 40 TISVLAKDTPGLLARLSCVFSRRGKNIISFSAVRDLDKIGFSRITIVCDPENIDQIIKQL 99
Query: 84 SVNVTIRFVKQ 94
+ V + +
Sbjct: 100 NKLVDVLDARL 110
>gi|94984708|ref|YP_604072.1| acetolactate synthase, small subunit [Deinococcus geothermalis
DSM 11300]
gi|94554989|gb|ABF44903.1| acetolactate synthase, small subunit [Deinococcus geothermalis
DSM 11300]
Length = 202
Score = 40.4 bits (94), Expect = 0.080, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSI 75
D ++ + D ++ + ++ G G NI +G ++ + + D +
Sbjct: 3 DPTPRDHLVSALVRDEPRVLTRITSLFGRRGYNIKSLSVGSTEHPGVSRMTFVVTGDRGV 62
Query: 76 LNSVLEKLSVNVTIRFV 92
+ + +L + +
Sbjct: 63 VEQAMRQLEKLHDVIKI 79
>gi|238503392|ref|XP_002382929.1| D-3-phosphoglycerate dehydrogenase [Aspergillus flavus NRRL3357]
gi|220690400|gb|EED46749.1| D-3-phosphoglycerate dehydrogenase [Aspergillus flavus NRRL3357]
Length = 493
Score = 40.4 bits (94), Expect = 0.081, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSIL 76
+ + ++ +I G++ V ILG++ ++ + A +D + +
Sbjct: 389 EPEHARVIYIHQNIPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMADISNVDNTTI 444
Query: 77 NSVLEKLSVN 86
+ E+L
Sbjct: 445 KDLYERLESL 454
>gi|217966705|ref|YP_002352211.1| MgtC/SapB transporter [Dictyoglomus turgidum DSM 6724]
gi|217335804|gb|ACK41597.1| MgtC/SapB transporter [Dictyoglomus turgidum DSM 6724]
Length = 215
Score = 40.4 bits (94), Expect = 0.081, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL-CIDGSILN-SVLEKL 83
+ ++ D G + +G +LGE ++I LG S + ++ L I + +L +L
Sbjct: 144 LNLIIEDRPGAIGEIGTLLGELNVDIKQIELGNSWEGKISLKILVRIPQKLTKNELLLRL 203
Query: 84 SVNVTIRFVKQF 95
S ++ V+
Sbjct: 204 SDLPSVVDVELI 215
>gi|229827395|ref|ZP_04453464.1| hypothetical protein GCWU000182_02783 [Abiotrophia defectiva ATCC
49176]
gi|229788333|gb|EEP24447.1| hypothetical protein GCWU000182_02783 [Abiotrophia defectiva ATCC
49176]
Length = 168
Score = 40.4 bits (94), Expect = 0.081, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVNVT 88
+ G++ V + G NI + ++ + ++ + D + + ++++L+
Sbjct: 11 DNTSGVLSRVAGLFSRRGFNIDSLTVSETERSVYSRMTIVSHGDDQVFDQIVKQLAKLED 70
Query: 89 IRFVKQFE 96
++ VK
Sbjct: 71 VKEVKVLH 78
>gi|257899690|ref|ZP_05679343.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
Com15]
gi|257837602|gb|EEV62676.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
Com15]
Length = 386
Score = 40.4 bits (94), Expect = 0.082, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG---SILNS 78
I I+ + ++L E + IA R+ EH + ID LN
Sbjct: 306 APFRFTIFYQKKTNILAEIFSLLNENELAIADI--SRNHKNEHVYILIDIDSTDFEQLNQ 363
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L +R V+ +
Sbjct: 364 VKQQLEKISGVRKVRLLK 381
>gi|254171964|ref|ZP_04878640.1| amino acid-binding protein [Thermococcus sp. AM4]
gi|214033860|gb|EEB74686.1| amino acid-binding protein [Thermococcus sp. AM4]
Length = 166
Score = 40.4 bits (94), Expect = 0.082, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 23/58 (39%)
Query: 35 GIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
GI+ + + + GINI + A + + I ++ +LS ++ +
Sbjct: 106 GILAKIAQKIADRGINIVQVVAEDPELYPEATLTIITEKPIPGDLINELSKLEGVKRI 163
>gi|115438570|ref|XP_001218100.1| D-3-phosphoglycerate dehydrogenase 2 [Aspergillus terreus NIH2624]
gi|114188915|gb|EAU30615.1| D-3-phosphoglycerate dehydrogenase 2 [Aspergillus terreus NIH2624]
Length = 466
Score = 40.4 bits (94), Expect = 0.082, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 7/79 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSIL 76
+ + ++ +I G++ V ILG++ ++ + A +D S +
Sbjct: 391 EPDHARVIYIHQNIPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMADISNVDNSTI 446
Query: 77 NSVLEKLSVNVTIRFVKQF 95
+ E+L + +
Sbjct: 447 KDLYERLESLSSRIMTRIL 465
>gi|14591040|ref|NP_143115.1| hypothetical protein PH1221 [Pyrococcus horikoshii OT3]
gi|3257638|dbj|BAA30321.1| 138aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 138
Score = 40.4 bits (94), Expect = 0.082, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS----VNV 87
D G++ + LG +GINI +S A +D S + +++L
Sbjct: 68 DKPGVLAKISGTLGRHGINILFNESEELESLGMAAIVAIVDISNSDVSVKELEGVLAKIE 127
Query: 88 TIRFVK 93
++ VK
Sbjct: 128 EVKEVK 133
>gi|85716288|ref|ZP_01047262.1| RelA/SpoT protein [Nitrobacter sp. Nb-311A]
gi|85696960|gb|EAQ34844.1| RelA/SpoT protein [Nitrobacter sp. Nb-311A]
Length = 751
Score = 40.4 bits (94), Expect = 0.082, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEK 82
I + + + G + V ++ E+ NI + + R S ++ L + D L++++ +
Sbjct: 677 RIVLDSLNEPGSLAQVATVIAEHDGNIDNISMTRRSSDFTEMTIDLEVYDLKHLSAIIAQ 736
Query: 83 LSVNVTIRFVKQFE 96
L + +++
Sbjct: 737 LRAKDVVARIERVN 750
>gi|315151230|gb|EFT95246.1| L-serine dehydratase, iron-sulfur-dependent, beta subunit
[Enterococcus faecalis TX0012]
Length = 231
Score = 40.4 bits (94), Expect = 0.083, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 3 SDGKPRF--IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G I++ N + ++ ++N + + + L + NI + R
Sbjct: 140 GGGTIEVKYIELDGFNVQLHGPLPILLVINQEEQ-AMQSFKDTLQKN--NIQVNAVSRYV 196
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ +D + ++SV E+L +
Sbjct: 197 EGNQILFIFDLDSAPISSVKEQLFSLDDTSKIILL 231
>gi|212711298|ref|ZP_03319426.1| hypothetical protein PROVALCAL_02370 [Providencia alcalifaciens DSM
30120]
gi|212686027|gb|EEB45555.1| hypothetical protein PROVALCAL_02370 [Providencia alcalifaciens DSM
30120]
Length = 743
Score = 40.4 bits (94), Expect = 0.083, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 12 IQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
I + + + + D G++ + IL +N+ + A +
Sbjct: 653 IDAVWGENYSSGYSLVVRVIANDRSGLLRDITTILANEKVNVLGVSSRSDVKQQLATIDM 712
Query: 70 CID---GSILNSVLEKLSVNVTIRFVK 93
I+ +L VL KL+ + K
Sbjct: 713 TIELYNIEVLGRVLSKLNQLPDVIEAK 739
>gi|53715045|ref|YP_101037.1| acetohydroxyacid synthase small subunit [Bacteroides fragilis
YCH46]
gi|60683007|ref|YP_213151.1| putative acetohydroxyacid synthase small subunit [Bacteroides
fragilis NCTC 9343]
gi|253566143|ref|ZP_04843597.1| acetohydroxyacid synthase small subunit [Bacteroides sp. 3_2_5]
gi|265766894|ref|ZP_06094723.1| acetolactate synthase, small subunit [Bacteroides sp. 2_1_16]
gi|52217910|dbj|BAD50503.1| acetohydroxyacid synthase small subunit [Bacteroides fragilis
YCH46]
gi|60494441|emb|CAH09237.1| putative acetohydroxyacid synthase small subunit [Bacteroides
fragilis NCTC 9343]
gi|251945247|gb|EES85685.1| acetohydroxyacid synthase small subunit [Bacteroides sp. 3_2_5]
gi|263253271|gb|EEZ24747.1| acetolactate synthase, small subunit [Bacteroides sp. 2_1_16]
gi|301164472|emb|CBW24030.1| putative acetohydroxyacid synthase small subunit [Bacteroides
fragilis 638R]
Length = 186
Score = 40.4 bits (94), Expect = 0.083, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
+ + + + G++ V + INI ++ S + D + V++
Sbjct: 6 YTLIVHSENFAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDTIEKVVK 65
Query: 82 KLSVNVTIRFVKQFE 96
++ + + F
Sbjct: 66 QIEKKIDVLQAHYFT 80
>gi|108803569|ref|YP_643506.1| prephenate dehydrogenase [Rubrobacter xylanophilus DSM 9941]
gi|108764812|gb|ABG03694.1| prephenate dehydrogenase [Rubrobacter xylanophilus DSM 9941]
Length = 339
Score = 40.4 bits (94), Expect = 0.084, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ G++ V +LG INI ++ R +TE A L ++ + L
Sbjct: 278 ENRPGVLAEVTTLLGSNSINILDLYV-RHSNTERAALVLTLNSEDARRAQKLLRE 331
>gi|88808990|ref|ZP_01124499.1| Homoserine dehydrogenase:ACT domain [Synechococcus sp. WH 7805]
gi|88786932|gb|EAR18090.1| Homoserine dehydrogenase:ACT domain [Synechococcus sp. WH 7805]
Length = 438
Score = 40.4 bits (94), Expect = 0.084, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK-LSVNVTI 89
D G++ +G+ G+ G++I + + + + + I + + ++K L ++
Sbjct: 368 DDAPGVIGRIGSCFGDQGVSI--QSIVQFDACDEGAEIVVITHEVSDGAMQKALRAITSL 425
Query: 90 RFVKQF 95
V+
Sbjct: 426 PEVRLL 431
>gi|325294217|ref|YP_004280731.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064665|gb|ADY72672.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 716
Score = 40.4 bits (94), Expect = 0.085, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 27/88 (30%), Gaps = 9/88 (10%)
Query: 15 INFDVDIGRLM----ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+ + + I + D G++ V + + + INI + + A+
Sbjct: 622 VKVEFLPSDRVYNAKIRVTAEDRPGLLANVSSAIAKLKINITS--VQTKSLSGRAVLDFI 679
Query: 71 IDGSILNS---VLEKLSVNVTIRFVKQF 95
+ V+ + + K+
Sbjct: 680 VQVKSKEELQKVIHTIKQVKGVIAAKRI 707
>gi|297807659|ref|XP_002871713.1| hypothetical protein ARALYDRAFT_488480 [Arabidopsis lyrata subsp.
lyrata]
gi|297317550|gb|EFH47972.1| hypothetical protein ARALYDRAFT_488480 [Arabidopsis lyrata subsp.
lyrata]
Length = 476
Score = 40.4 bits (94), Expect = 0.085, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 27/69 (39%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D GI+ + + G NI +G ++ + +L V+E+L
Sbjct: 75 HTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNEDKALFTIVVLGTDKVLQQVVEQL 134
Query: 84 SVNVTIRFV 92
+ V + V
Sbjct: 135 NKLVNVIKV 143
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE---HAISFLCIDGSILNSV- 79
+ ++ A++ G++ + + G NI +G ++ D +I V
Sbjct: 307 HTLSLLVANVPGVLNLITGAISRRGYNIQSLAVGPAEKEGLSRITTVIPGTDENIDKLVR 366
Query: 80 -LEKLSVNVTIRFVKQFEF 97
L+KL I+ + F
Sbjct: 367 QLQKLIDLQEIQNITHMPF 385
>gi|71064830|ref|YP_263557.1| homoserine dehydrogenase [Psychrobacter arcticus 273-4]
gi|71037815|gb|AAZ18123.1| homoserine dehydrogenase [Psychrobacter arcticus 273-4]
Length = 448
Score = 40.4 bits (94), Expect = 0.085, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 6/82 (7%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---- 78
+ + D G++ + IL + GINI + + + ++ S
Sbjct: 366 GYYLRVHAYDSPGVLADITRILSDAGINIDAILQKPAHKLGQVPVII-LTLPVVESQMNL 424
Query: 79 VLEKLSVNVTIRFVKQFEFNVD 100
+EK+ TI K +D
Sbjct: 425 AIEKIEKLDTITD-KVVRIRLD 445
>gi|163750349|ref|ZP_02157589.1| PII uridylyl-transferase [Shewanella benthica KT99]
gi|161329839|gb|EDQ00825.1| PII uridylyl-transferase [Shewanella benthica KT99]
Length = 859
Score = 40.4 bits (94), Expect = 0.086, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 8/79 (10%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSV 79
G + + D + V +L IN+ A + + L DGS
Sbjct: 674 GGTELFVYGQDKPKLFATVMTLLDNKNINVHDASIMTSKDNYALDSFVILEQDGSP---- 729
Query: 80 LEKLSVNVTIRF--VKQFE 96
+ +++ I+ VK
Sbjct: 730 VAQIARIQGIKKALVKALS 748
>gi|118579722|ref|YP_900972.1| homoserine dehydrogenase [Pelobacter propionicus DSM 2379]
gi|118502432|gb|ABK98914.1| homoserine dehydrogenase [Pelobacter propionicus DSM 2379]
Length = 438
Score = 40.4 bits (94), Expect = 0.086, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSV 79
+ M+ DI G++ + LG++GI+I+ ++ ++A + ++ SV
Sbjct: 352 SKYMLRFSTRDIPGVLGTITGALGKHGISISSMVQTAHEANDNAPVPIVIMTHEAVEGSV 411
Query: 80 LEKLSVNVTIRFV 92
L + FV
Sbjct: 412 QAALEEIDRLDFV 424
>gi|325970781|ref|YP_004246972.1| acetolactate synthase, small subunit [Spirochaeta sp. Buddy]
gi|324026019|gb|ADY12778.1| acetolactate synthase, small subunit [Spirochaeta sp. Buddy]
Length = 176
Score = 40.4 bits (94), Expect = 0.087, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGS 74
+ R + I+ + G+++ V ++ G NI +G ++ + + + + D
Sbjct: 1 MNSSENRYTLAILVNNQPGVLMRVVSLFSRRGYNIDSLSVGETEKEDVSRITIVVSGDRP 60
Query: 75 ILNSVLEKLSVNVTIRFV 92
++ + +++ + ++ V
Sbjct: 61 VVEQIKKQVGKLIDVKRV 78
>gi|295836504|ref|ZP_06823437.1| homoserine dehydrogenase [Streptomyces sp. SPB74]
gi|295826062|gb|EFG64649.1| homoserine dehydrogenase [Streptomyces sp. SPB74]
Length = 432
Score = 40.4 bits (94), Expect = 0.087, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNV 87
D G++ V + E G++I GR + A + + ++ +E L
Sbjct: 359 DKPGVLAQVATVFAEQGVSIDTVRQQGRGDGSGEASLVVVTHRAADAALSSTVEALRKLD 418
Query: 88 TIRFVKQF 95
T+R V
Sbjct: 419 TVRGVASI 426
>gi|222423112|dbj|BAH19535.1| AT5G16290 [Arabidopsis thaliana]
Length = 477
Score = 40.4 bits (94), Expect = 0.087, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 27/69 (39%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D GI+ + + G NI +G ++ + +L V+E+L
Sbjct: 77 HTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNEDKALFTIVVLGTDKVLQQVVEQL 136
Query: 84 SVNVTIRFV 92
+ V + V
Sbjct: 137 NKLVNVIKV 145
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE---HAISFLCIDGSILNSV- 79
+ ++ A++ G++ + + G NI +G ++ D +I V
Sbjct: 308 HTLSLLVANVPGVLNLITGAISRRGYNIQSLAVGPAEKEGLSRITTVIPGTDENIDKLVR 367
Query: 80 -LEKLSVNVTIRFVKQFEF 97
L+KL I+ + F
Sbjct: 368 QLQKLIDLQEIQNITHMPF 386
>gi|15237321|ref|NP_197133.1| acetolactate synthase small subunit, putative [Arabidopsis
thaliana]
gi|30685790|ref|NP_850829.1| acetolactate synthase small subunit, putative [Arabidopsis
thaliana]
gi|9759111|dbj|BAB09596.1| acetolactate synthase-like protein [Arabidopsis thaliana]
gi|63003744|gb|AAY25401.1| At5g16290 [Arabidopsis thaliana]
gi|110742103|dbj|BAE98982.1| acetolactate synthase-like protein [Arabidopsis thaliana]
gi|332004889|gb|AED92272.1| protein valine-tolerant 1 [Arabidopsis thaliana]
gi|332004890|gb|AED92273.1| protein valine-tolerant 1 [Arabidopsis thaliana]
Length = 477
Score = 40.4 bits (94), Expect = 0.087, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 27/69 (39%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D GI+ + + G NI +G ++ + +L V+E+L
Sbjct: 77 HTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNEDKALFTIVVLGTDKVLQQVVEQL 136
Query: 84 SVNVTIRFV 92
+ V + V
Sbjct: 137 NKLVNVIKV 145
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE---HAISFLCIDGSILNSV- 79
+ ++ A++ G++ + + G NI +G ++ D +I V
Sbjct: 308 HTLSLLVANVPGVLNLITGAISRRGYNIQSLAVGPAEKEGLSRITTVIPGTDENIDKLVR 367
Query: 80 -LEKLSVNVTIRFVKQFEF 97
L+KL I+ + F
Sbjct: 368 QLQKLIDLQEIQNITHMPF 386
>gi|226328918|ref|ZP_03804436.1| hypothetical protein PROPEN_02820 [Proteus penneri ATCC 35198]
gi|225202104|gb|EEG84458.1| hypothetical protein PROPEN_02820 [Proteus penneri ATCC 35198]
Length = 745
Score = 40.4 bits (94), Expect = 0.088, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 653 RIV--DAVWGENYSSGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVSSRSDVKQQIA 710
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L+ +L KL+ + K+F
Sbjct: 711 TIDMNIEIYNLQVLSRILAKLNQLPDVIEAKRFS 744
>gi|331695669|ref|YP_004331908.1| acetolactate synthase small subunit [Pseudonocardia dioxanivorans
CB1190]
gi|326950358|gb|AEA24055.1| acetolactate synthase, small subunit [Pseudonocardia
dioxanivorans CB1190]
Length = 168
Score = 40.4 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ D G++ V + G NI +G ++ + + ++ L V +
Sbjct: 4 HTLSVLVEDKPGVLARVSGLFSRRGFNIISLAVGPTEQEGVSRMTIVVAVEDLPLEQVTK 63
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 64 QLNKLVNVIKI 74
>gi|315126975|ref|YP_004068978.1| transcriptional repressor for cleavage of glycine
[Pseudoalteromonas sp. SM9913]
gi|315015489|gb|ADT68827.1| transcriptional repressor for cleavage of glycine
[Pseudoalteromonas sp. SM9913]
Length = 177
Score = 40.4 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 20/79 (25%), Gaps = 5/79 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV-L 80
+ D G + V + INI + ++ +I V +
Sbjct: 94 AGYTLEYTGIDTPGTLSKVTRFFADNNINICSLKSDTYEEETELKMRCELEFNIPVDVDI 153
Query: 81 EKLS----VNVTIRFVKQF 95
++ + V
Sbjct: 154 DQFKISFENLSHVLNVDYI 172
>gi|255011184|ref|ZP_05283310.1| putative acetohydroxyacid synthase small subunit [Bacteroides
fragilis 3_1_12]
gi|313148996|ref|ZP_07811189.1| acetohydroxyacid synthase small subunit [Bacteroides fragilis
3_1_12]
gi|313137763|gb|EFR55123.1| acetohydroxyacid synthase small subunit [Bacteroides fragilis
3_1_12]
Length = 186
Score = 40.4 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
+ + + + G++ V + INI ++ S + D + V++
Sbjct: 6 YTLIVHSENFAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDTIEKVVK 65
Query: 82 KLSVNVTIRFVKQFE 96
++ + + F
Sbjct: 66 QIEKKIDVLQAHYFT 80
>gi|148643284|ref|YP_001273797.1| acetolactate synthase, small subunit (regulatory), IlvH
[Methanobrevibacter smithii ATCC 35061]
gi|222445516|ref|ZP_03608031.1| hypothetical protein METSMIALI_01156 [Methanobrevibacter smithii
DSM 2375]
gi|261349923|ref|ZP_05975340.1| acetolactate synthase, small subunit [Methanobrevibacter smithii
DSM 2374]
gi|148552301|gb|ABQ87429.1| acetolactate synthase, small subunit (regulatory), IlvH
[Methanobrevibacter smithii ATCC 35061]
gi|222435081|gb|EEE42246.1| hypothetical protein METSMIALI_01156 [Methanobrevibacter smithii
DSM 2375]
gi|288860706|gb|EFC93004.1| acetolactate synthase, small subunit [Methanobrevibacter smithii
DSM 2374]
Length = 163
Score = 40.4 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
+ + +I + D G++ V + G NI +G S+ A + + D +L
Sbjct: 1 MALEYHVINALVEDKPGVLQKVAGLFTRRGFNIDSITVGESEVEGLARMIITVKADQKLL 60
Query: 77 NSVLEKLSVNVTIRFVKQFE 96
V ++L+ V + +K
Sbjct: 61 EQVTKQLNKLVDVIKIKDIT 80
>gi|14591337|ref|NP_143415.1| hypothetical protein PH1554 [Pyrococcus horikoshii OT3]
gi|3257983|dbj|BAA30666.1| 166aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 166
Score = 40.4 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 27/76 (35%), Gaps = 8/76 (10%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL 76
+++ I GI+ V + + GINI + A + + I
Sbjct: 96 IEIEPEPRAI--------GILARVAQKIADRGINIVQAIAEDPELYPEATLTIITEKPIP 147
Query: 77 NSVLEKLSVNVTIRFV 92
++ +LS ++ +
Sbjct: 148 GDLINELSKLEGVKRI 163
>gi|240102759|ref|YP_002959068.1| Regulator of amino acid metabolism, putative, containing ACT domain
[Thermococcus gammatolerans EJ3]
gi|239910313|gb|ACS33204.1| Regulator of amino acid metabolism, putative, containing ACT domain
[Thermococcus gammatolerans EJ3]
Length = 166
Score = 40.4 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 23/58 (39%)
Query: 35 GIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
GI+ + + + GINI + A + + I ++ +LS ++ +
Sbjct: 106 GILAKIAQKIADRGINIVQVVAEDPELYPEATLTIITEKPIPGDLINELSKLEGVKRI 163
>gi|226365949|ref|YP_002783732.1| acetolactate synthase 3 regulatory subunit [Rhodococcus opacus
B4]
gi|226244439|dbj|BAH54787.1| acetolactate synthase small subunit [Rhodococcus opacus B4]
Length = 167
Score = 40.4 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ D G++ V + G NI +G ++ E + + +D L V +
Sbjct: 5 HTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGGTELPEISRMTIVVTVDEFPLEQVTK 64
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 65 QLNKLVNVIKI 75
>gi|254580095|ref|XP_002496033.1| ZYRO0C08932p [Zygosaccharomyces rouxii]
gi|238938924|emb|CAR27100.1| ZYRO0C08932p [Zygosaccharomyces rouxii]
Length = 469
Score = 40.4 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSILNSVLE 81
+ ++ ++ G++ V NIL + NI + A +D S + +V +
Sbjct: 399 RVLYIHHNVPGVLKTVNNILSNH--NIEKQFS--DSKGDIAYLMADISNVDQSDIKNVYD 454
Query: 82 KLSVNVTIRFVKQF 95
+L+ ++
Sbjct: 455 ELNQTDAKISIRLL 468
>gi|298528118|ref|ZP_07015522.1| acetolactate synthase, small subunit [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511770|gb|EFI35672.1| acetolactate synthase, small subunit [Desulfonatronospira
thiodismutans ASO3-1]
Length = 160
Score = 40.4 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ ++ + G++ V + G NI ++G + ++ + D I+ +++
Sbjct: 3 HVLSVLVENEPGVLSRVAGLFSGRGFNIDTLNVGPTLEKGVSLMTISTHGDEQIIEQIIK 62
Query: 82 KLSVNVTIRFV 92
+L +T+ V
Sbjct: 63 QLRKLITVIKV 73
>gi|261408918|ref|YP_003245159.1| acetolactate synthase small subunit [Paenibacillus sp. Y412MC10]
gi|329922260|ref|ZP_08277962.1| acetolactate synthase, small subunit [Paenibacillus sp. HGF5]
gi|261285381|gb|ACX67352.1| acetolactate synthase, small subunit [Paenibacillus sp. Y412MC10]
gi|328942297|gb|EGG38567.1| acetolactate synthase, small subunit [Paenibacillus sp. HGF5]
Length = 161
Score = 40.4 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ D G++ V + G G NI +G+S+ + + D + L V +
Sbjct: 5 HTIAVLVNDQPGVLQRVSGLFGRRGFNIESITVGQSEEIGLSRMVIVTTGDETTLEQVEK 64
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 65 QLYKLIDVIKV 75
>gi|226356006|ref|YP_002785746.1| prephenate dehydrogenase [Deinococcus deserti VCD115]
gi|226317996|gb|ACO45992.1| putative prephenate dehydrogenase (chorismate mutase--prephenate
dehydrogenase) [Deinococcus deserti VCD115]
Length = 369
Score = 40.4 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 17/60 (28%), Gaps = 1/60 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFH-LGRSQSTEHAISFLCIDGSILNSV 79
+ + + D + V LG G+NI L + L + +
Sbjct: 296 PQKHDLVVAVPDRPNQIGAVTQALGAEGVNIKDIEVLAIREEGGALRLGLESPEEVQRAA 355
>gi|220931925|ref|YP_002508833.1| acetolactate synthase, small subunit [Halothermothrix orenii H
168]
gi|219993235|gb|ACL69838.1| acetolactate synthase, small subunit [Halothermothrix orenii H
168]
Length = 168
Score = 40.4 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ + + G++ + ++ NI ++G +++ E + + + D +L V +
Sbjct: 3 HILSVSVLNKPGVLTRIASLFSRRNFNIESLNVGHTENPEISRMTIVVKGDDRVLEQVKK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + + +
Sbjct: 63 QLHKLIDVIKITELN 77
>gi|183600075|ref|ZP_02961568.1| hypothetical protein PROSTU_03608 [Providencia stuartii ATCC 25827]
gi|188022361|gb|EDU60401.1| hypothetical protein PROSTU_03608 [Providencia stuartii ATCC 25827]
Length = 745
Score = 40.4 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 12 IQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + + + D G++ + IL +N+ + A +
Sbjct: 655 VDAVWGENYSSGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVSSRSDVKQQLATIDM 714
Query: 70 CIDG---SILNSVLEKLSVNVTIRFVK 93
I+ +L VL KL+ + K
Sbjct: 715 TIEIYNLQVLARVLAKLNQLPDVIEAK 741
>gi|160931222|ref|ZP_02078624.1| hypothetical protein CLOLEP_00059 [Clostridium leptum DSM 753]
gi|156869777|gb|EDO63149.1| hypothetical protein CLOLEP_00059 [Clostridium leptum DSM 753]
Length = 166
Score = 40.4 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ + G++ V + G NI +G ++ + + + + D I+ V +
Sbjct: 3 YTISVLVENHPGVLSKVSGLFSRRGFNIDSLAVGVTEDSTISRMTIVVNGDEYIVEQVEK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + VK
Sbjct: 63 QLNKVIPVIKVKTLN 77
>gi|28950351|emb|CAD70975.1| probable 3-phosphoglycerate dehydrogenase [Neurospora crassa]
Length = 288
Score = 40.4 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 7/91 (7%), Positives = 30/91 (32%), Gaps = 9/91 (9%)
Query: 10 IKIQEINFDV----DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ + E+ + + ++ ++ G++ V IL E+ ++ + A
Sbjct: 199 VNVPEVTMRSLTLDEPNHARVIYIHRNVPGVLRKVNEILAEHNVD----KQISDSKGDLA 254
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ + ++ + ++ +
Sbjct: 255 YLMADV-SDVKQDDIKNIRDSLDSLSSRILT 284
>gi|114566428|ref|YP_753582.1| MgtC family protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337363|gb|ABI68211.1| MgtC family protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 221
Score = 40.0 bits (93), Expect = 0.094, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NSVLEK 82
+ +V D G V +G+ILG+ + I + L R + L + V+++
Sbjct: 148 LVMVVDDRPGQVGTIGSILGDLCVLIKNIQLTRVDEGDSLEIELLLQLPPNLSIEEVIQE 207
Query: 83 LSVNVTIRFVKQF 95
LS+ +R + +
Sbjct: 208 LSIIKGLRSIDRL 220
>gi|325294804|ref|YP_004281318.1| acetolactate synthase, small subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065252|gb|ADY73259.1| acetolactate synthase, small subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 173
Score = 40.0 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS--TEHAISFLCIDGSILNSVLE 81
+I ++ + G + + + G NI ++GR++ D + +++
Sbjct: 9 HVISVLVENQPGALARIIELFSSRGYNIESLNVGRTEDPTISRITMVAKGDEHTIEQIVK 68
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 69 QLRRIIDVFKVRDLT 83
>gi|296270780|ref|YP_003653412.1| acetolactate synthase small subunit [Thermobispora bispora DSM
43833]
gi|296093567|gb|ADG89519.1| acetolactate synthase, small subunit [Thermobispora bispora DSM
43833]
Length = 174
Score = 40.0 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNS 78
+ + ++ + G++ V + G NI +G ++ E + + + + L
Sbjct: 1 MSHHTLSVLVENKPGVLARVAALFSRRGFNIESLAVGPTEHPEISRMTIVVNAEDHPLEQ 60
Query: 79 VLEKLSVNVTIRFV 92
V ++L+ + I +
Sbjct: 61 VTKQLNKLINIIKI 74
>gi|312140493|ref|YP_004007829.1| acetolactate synthase small subunit ilvn [Rhodococcus equi 103S]
gi|325675888|ref|ZP_08155572.1| acetolactate synthase small subunit [Rhodococcus equi ATCC 33707]
gi|311889832|emb|CBH49149.1| acetolactate synthase small subunit IlvN [Rhodococcus equi 103S]
gi|325553859|gb|EGD23537.1| acetolactate synthase small subunit [Rhodococcus equi ATCC 33707]
Length = 167
Score = 40.0 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ D G++ V + G NI +G ++ + + + +D L V +
Sbjct: 5 HTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGGTEVPDISRMTIVVTVDEFPLEQVTK 64
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 65 QLNKLVNVIKI 75
>gi|46579788|ref|YP_010596.1| acetolactate synthase 3 regulatory subunit [Desulfovibrio
vulgaris str. Hildenborough]
gi|120602735|ref|YP_967135.1| acetolactate synthase 3 regulatory subunit [Desulfovibrio
vulgaris DP4]
gi|46449203|gb|AAS95855.1| acetolactate synthase, small subunit [Desulfovibrio vulgaris str.
Hildenborough]
gi|120562964|gb|ABM28708.1| acetolactate synthase, small subunit [Desulfovibrio vulgaris DP4]
gi|311233579|gb|ADP86433.1| acetolactate synthase, small subunit [Desulfovibrio vulgaris
RCH1]
Length = 162
Score = 40.0 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ ++ + G++ V + G NI ++ + ++ + D + +++
Sbjct: 3 HVLSVLVENEPGVLSRVAGLFSGRGFNIESLNVAPTLDRGVSLMTISTRGDEQVKEQIVK 62
Query: 82 KLSVNVTIRFV 92
+L VT+ V
Sbjct: 63 QLRKLVTVIKV 73
>gi|315231109|ref|YP_004071545.1| acetolactate synthase small subunit [Thermococcus barophilus MP]
gi|315184137|gb|ADT84322.1| acetolactate synthase small subunit [Thermococcus barophilus MP]
Length = 135
Score = 40.0 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS-VNVTI 89
D G++ + +LG +NI + A +D S +E+L I
Sbjct: 64 EDKPGVLAKISGVLGRNRVNILFSEAEELEGIGLAAIVTVVDVSEAKISIEELKDELENI 123
Query: 90 RFVKQFEFNV 99
VK+ +
Sbjct: 124 EEVKEITLKI 133
>gi|84489863|ref|YP_448095.1| regulator of aminoacid metabolism [Methanosphaera stadtmanae DSM
3091]
gi|84373182|gb|ABC57452.1| predicted regulator of aminoacid metabolism [Methanosphaera
stadtmanae DSM 3091]
Length = 167
Score = 40.0 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 21/61 (34%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
+ GI+ V +L I+I + + + D + +++ L +
Sbjct: 104 NKPGILSKVTELLAYEKISIRQAYASDPEIDLTPHLTIITDKPVNGDLIQLLLKIEGVSK 163
Query: 92 V 92
V
Sbjct: 164 V 164
>gi|315649032|ref|ZP_07902126.1| acetolactate synthase, small subunit [Paenibacillus vortex V453]
gi|315275713|gb|EFU39067.1| acetolactate synthase, small subunit [Paenibacillus vortex V453]
Length = 161
Score = 40.0 bits (93), Expect = 0.096, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ D G++ V + G G NI +G+S+ + + D + L V +
Sbjct: 5 HTIAVLVNDQPGVLQRVSGLFGRRGFNIESITVGQSEEAGLSRMVIVTTGDETTLEQVEK 64
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 65 QLYKLIDVIKV 75
>gi|120602193|ref|YP_966593.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio vulgaris DP4]
gi|120562422|gb|ABM28166.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio vulgaris DP4]
Length = 717
Score = 40.0 bits (93), Expect = 0.096, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 6/89 (6%)
Query: 8 RFIKI--QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIA--HFHLGRSQSTE 63
R I + R+ + N G++ + +L E INI H +E
Sbjct: 623 RLISVFWDGHEDKPFPARIHLLCRNE--KGVLAQISALLAEANINIDSGTMHSLVDGHSE 680
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ D + L +++L + V
Sbjct: 681 VELMVEVRDVAHLYHTMDRLRKLPAVLEV 709
>gi|46580488|ref|YP_011296.1| GTP pyrophosphokinase [Desulfovibrio vulgaris str. Hildenborough]
gi|46449907|gb|AAS96556.1| GTP pyrophosphokinase [Desulfovibrio vulgaris str. Hildenborough]
gi|311234230|gb|ADP87084.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio vulgaris RCH1]
Length = 717
Score = 40.0 bits (93), Expect = 0.096, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 6/89 (6%)
Query: 8 RFIKI--QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIA--HFHLGRSQSTE 63
R I + R+ + N G++ + +L E INI H +E
Sbjct: 623 RLISVFWDGHEDKPFPARIHLLCRNE--KGVLAQISALLAEANINIDSGTMHSLVDGHSE 680
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ D + L +++L + V
Sbjct: 681 VELMVEVRDVAHLYHTMDRLRKLPAVLEV 709
>gi|256832931|ref|YP_003161658.1| acetolactate synthase, small subunit [Jonesia denitrificans DSM
20603]
gi|256686462|gb|ACV09355.1| acetolactate synthase, small subunit [Jonesia denitrificans DSM
20603]
Length = 175
Score = 40.0 bits (93), Expect = 0.098, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCIDGSILNS 78
+ R + ++ + G++ + + NI +G ++ E + +D L
Sbjct: 1 MSRHTLSVLVENKPGVLTRIAGLFARRAFNIHSLAVGPTEHEELSRVTVVVDVDELPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 VTKQLNKLVNVIKIVELE 78
>gi|323703256|ref|ZP_08114908.1| acetolactate synthase, small subunit [Desulfotomaculum
nigrificans DSM 574]
gi|323531812|gb|EGB21699.1| acetolactate synthase, small subunit [Desulfotomaculum
nigrificans DSM 574]
Length = 170
Score = 40.0 bits (93), Expect = 0.099, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +GR+++ + + + D +L V +
Sbjct: 3 HTLAVLVENSPGVLARVAGLFSRRGYNIDSLSVGRTENPAISRMTIVVEGDDYVLEQVEK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L V + +
Sbjct: 63 QLHKLVDVIKISDIT 77
>gi|113952772|ref|YP_730154.1| homoserine dehydrogenase [Synechococcus sp. CC9311]
gi|113880123|gb|ABI45081.1| homoserine dehydrogenase [Synechococcus sp. CC9311]
Length = 438
Score = 40.0 bits (93), Expect = 0.099, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSIL-NSVLEKLSVNVT 88
+ G++ +G+ G++ ++I L S + + + G+ ++ L+ +
Sbjct: 368 ENAPGVIGRIGSCFGDHNVSIQSIVQLEASDAGAEIVVITHVVGNAQMSAALKAIHALPG 427
Query: 89 IRF 91
+
Sbjct: 428 VLS 430
>gi|212716735|ref|ZP_03324863.1| hypothetical protein BIFCAT_01672 [Bifidobacterium catenulatum
DSM 16992]
gi|212660439|gb|EEB21014.1| hypothetical protein BIFCAT_01672 [Bifidobacterium catenulatum
DSM 16992]
Length = 182
Score = 40.0 bits (93), Expect = 0.099, Method: Composition-based stats.
Identities = 6/71 (8%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLE 81
+ ++ + G++ + + NI + ++ + + + +D L +++
Sbjct: 12 HTLSVLVENRPGVLARIAGLFARRAFNINSLSVSPTERPDISRVTVTAEVDEVPLEQIIK 71
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 72 QLNKLLHVLKI 82
>gi|195953575|ref|YP_002121865.1| acetolactate synthase, small subunit [Hydrogenobaculum sp.
Y04AAS1]
gi|195933187|gb|ACG57887.1| acetolactate synthase, small subunit [Hydrogenobaculum sp.
Y04AAS1]
Length = 183
Score = 40.0 bits (93), Expect = 0.099, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I I+ + G++ + ++ G NI +G + + + + D +++ +++
Sbjct: 20 HIISILVNNEFGVLARIATLIAGKGYNIESLSVGETSEANLSRITIEVKGDDIVIDQMIK 79
Query: 82 KLSVNVTIRFVKQFE 96
+L + V+
Sbjct: 80 QLRRLIDTVKVRDLT 94
>gi|78485595|ref|YP_391520.1| homoserine dehydrogenase [Thiomicrospira crunogena XCL-2]
gi|78363881|gb|ABB41846.1| homoserine dehydrogenase [Thiomicrospira crunogena XCL-2]
Length = 438
Score = 40.0 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 13/96 (13%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
R ++I EI + D G++ V +IL E+ INI H S
Sbjct: 344 ARVVEIDEIT-----TAYYLRCFAKDNAGVLAKVTSILAEFKINIELLHQEPSSQNPDDA 398
Query: 67 SFLCIDGSILN-------SVLEKLSVNVT-IRFVKQ 94
+ + I ++ LE L I ++
Sbjct: 399 TLVMITNAVKETDLNKAIKALESLDAIDGKIMRIRV 434
>gi|225351175|ref|ZP_03742198.1| hypothetical protein BIFPSEUDO_02765 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225158631|gb|EEG71873.1| hypothetical protein BIFPSEUDO_02765 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 182
Score = 40.0 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 6/71 (8%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLE 81
+ ++ + G++ + + NI + ++ + + + +D L +++
Sbjct: 12 HTLSVLVENRPGVLARIAGLFARRAFNINSLSVSPTERPDISRVTVTADVDEVPLEQIIK 71
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 72 QLNKLLHVLKI 82
>gi|156741538|ref|YP_001431667.1| acetolactate synthase small subunit [Roseiflexus castenholzii DSM
13941]
gi|156232866|gb|ABU57649.1| acetolactate synthase, small subunit [Roseiflexus castenholzii
DSM 13941]
Length = 180
Score = 40.0 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 30/69 (43%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D G++ V ++ G NI +G S++ + + ++ + V+++L
Sbjct: 4 HTIVALVQDRPGVLSRVVGLIRRRGFNIESLAVGHSETPGISRMTIVVEWEDVEQVVKQL 63
Query: 84 SVNVTIRFV 92
+ + V
Sbjct: 64 YRLIEVLKV 72
>gi|11499262|ref|NP_070500.1| acetolactate synthase, small subunit, putative [Archaeoglobus
fulgidus DSM 4304]
gi|2648892|gb|AAB89585.1| acetolactate synthase, small subunit, putative [Archaeoglobus
fulgidus DSM 4304]
Length = 137
Score = 40.0 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 14 EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG 73
+ ++ + D G + + LG+ G+NI + + S+ + I F D
Sbjct: 62 GFTVRLT---NVLAVEVEDKPGALHRIAKALGDAGVNIDYVYAFTSEKHKALIIFRVDDR 118
Query: 74 SILNSVLEKL 83
VLEKL
Sbjct: 119 EKAKEVLEKL 128
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ G + V +L ++ INI F + + + I + +D + + L
Sbjct: 10 ENKPGRLAAVTEVLMKHNINIRAFTIA--DAGDFGIIRMVVDK--TDEAYQALKE 60
>gi|307594197|ref|YP_003900514.1| ACT domain-containing protein [Vulcanisaeta distributa DSM 14429]
gi|307549398|gb|ADN49463.1| ACT domain-containing protein [Vulcanisaeta distributa DSM 14429]
Length = 229
Score = 40.0 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D GI+ + N+ ++GINI + + R+Q H + L + LN + ++L + +
Sbjct: 29 DRPGILAALSNVFADHGINILNISVNRTQLLLHFVVDLTNTDTSLNDLEKELKRFSFVEW 88
Query: 92 VKQ 94
VK
Sbjct: 89 VKY 91
>gi|72162823|ref|YP_290480.1| homoserine dehydrogenase [Thermobifida fusca YX]
gi|71916555|gb|AAZ56457.1| homoserine dehydrogenase [Thermobifida fusca YX]
Length = 431
Score = 40.0 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 33/95 (34%), Gaps = 14/95 (14%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
V I + D G++ V + G++I H+ + + A L
Sbjct: 336 KLPVHPMGETITSYHVALDVADRPGVLAGVAKVFAANGVSIK--HVRQEGRGDDAQLVLV 393
Query: 71 IDGSILNSV---LEKLSVNVTIRFV----KQFEFN 98
+ ++ +E+L + +R V + F+
Sbjct: 394 SHTAPDAALARTVEQLRNHEDVRAVASVMRVETFD 428
>gi|308177032|ref|YP_003916438.1| homoserine dehydrogenase [Arthrobacter arilaitensis Re117]
gi|307744495|emb|CBT75467.1| homoserine dehydrogenase [Arthrobacter arilaitensis Re117]
Length = 428
Score = 40.0 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVNVT 88
D G++ + + GE+G++I + L + L S +E L
Sbjct: 356 KDQSGVLAAIATVFGEHGVSIESMSQQVDAEAGAQLRILTHQGTEAALASTVEALKALDA 415
Query: 89 IRFV 92
+ V
Sbjct: 416 VHSV 419
>gi|295657631|ref|XP_002789382.1| D-3-phosphoglycerate dehydrogenase [Paracoccidioides brasiliensis
Pb01]
gi|226283866|gb|EEH39432.1| D-3-phosphoglycerate dehydrogenase [Paracoccidioides brasiliensis
Pb01]
Length = 474
Score = 40.0 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 29/81 (35%), Gaps = 8/81 (9%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + + + + ++ +I G++ V ILG++ ++ + A
Sbjct: 387 VNLRSLTIE-EPNHGRVIFIHQNIPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMA 441
Query: 70 CIDGSIL---NSVLEKLSVNV 87
I + EKL
Sbjct: 442 DISDVSTSDIKDLYEKLESLP 462
>gi|116671084|ref|YP_832017.1| acetolactate synthase 3 regulatory subunit [Arthrobacter sp.
FB24]
gi|116611193|gb|ABK03917.1| acetolactate synthase, small subunit [Arthrobacter sp. FB24]
Length = 170
Score = 40.0 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ D G++ V ++ NI +G ++ + + DG ++ V +
Sbjct: 4 HTLSVLVEDKPGVLTRVASLFARRAFNINSLAVGPTEVPGMSRMTVVVDADGDLIEQVTK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + + +
Sbjct: 64 QLNKLINVIKIVELT 78
>gi|323703739|ref|ZP_08115379.1| CBS domain containing protein [Desulfotomaculum nigrificans DSM
574]
gi|323531327|gb|EGB21226.1| CBS domain containing protein [Desulfotomaculum nigrificans DSM
574]
Length = 210
Score = 40.0 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ + D +G + + +I+ INI F + R + + + ++ + +++
Sbjct: 139 AGTRLVLQTQDRVGALAELTDIIRAMNINIRAFVVHRKDN-DVVHIIVRVNTIDPDPLVK 197
Query: 82 KLSV 85
+L
Sbjct: 198 ELEA 201
>gi|258405781|ref|YP_003198523.1| acetolactate synthase 3 regulatory subunit [Desulfohalobium
retbaense DSM 5692]
gi|257798008|gb|ACV68945.1| acetolactate synthase, small subunit [Desulfohalobium retbaense
DSM 5692]
Length = 162
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI ++ + ++ + D I+ +++
Sbjct: 3 HTLSVLVENEPGVLSRVAGLFSGRGFNIESLNVAPTLEEGISLMTITTRGDEQIIEQIIK 62
Query: 82 KLSVNVTIRFV 92
+L VT+ V
Sbjct: 63 QLRKLVTVIKV 73
>gi|90020856|ref|YP_526683.1| homoserine dehydrogenase [Saccharophagus degradans 2-40]
gi|89950456|gb|ABD80471.1| homoserine dehydrogenase [Saccharophagus degradans 2-40]
Length = 450
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 34/96 (35%), Gaps = 3/96 (3%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + + I I D G++ + IL + GI+I + + +
Sbjct: 352 KLVDYPILPIEEVETAYYIRISALDRPGVLSKITQILSDAGISIEALIQKEPKEGQDHVP 411
Query: 68 FLCI-DGSILNSVLEKLSVNVTIRFV--KQFEFNVD 100
+ + + +I ++ + + + K V+
Sbjct: 412 VILLTNRAIEKQIIAAIKKIEALDSINGKVVRIRVE 447
>gi|2827555|emb|CAA16563.1| Translation factor EF-1 alpha - like protein [Arabidopsis thaliana]
gi|7269125|emb|CAB79233.1| Translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 458
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 26/105 (24%)
Query: 13 QEINFDVDIGRLMIC------------------IVNADILGIVVFVGNILGEYGINIAHF 54
+ R + + AD G++ V IL E G+NIA
Sbjct: 303 DGHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILRENGLNIARA 362
Query: 55 HLGRSQSTEHAISFLCIDGS----ILNSVLEKLSVNVTI--RFVK 93
+ S A + + + I +++ + + I VK
Sbjct: 363 EISTKDS--IARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVK 405
>gi|258651699|ref|YP_003200855.1| acetolactate synthase small subunit [Nakamurella multipartita DSM
44233]
gi|258554924|gb|ACV77866.1| acetolactate synthase, small subunit [Nakamurella multipartita
DSM 44233]
Length = 170
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNS 78
+ R + ++ + G++ V ++ G NI +G +++ E + + ++G L
Sbjct: 1 MSRHTLSVLVENKPGVLARVSSLFSRRGFNIHSLAVGPTENPEVSRMTIVVAVEGLPLEQ 60
Query: 79 VLEKLSVNVTIRFV 92
V ++L+ V + +
Sbjct: 61 VTKQLNKLVNVLKI 74
>gi|18977944|ref|NP_579301.1| hypothetical protein PF1572 [Pyrococcus furiosus DSM 3638]
gi|18893716|gb|AAL81696.1| hypothetical protein PF1572 [Pyrococcus furiosus DSM 3638]
Length = 175
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 27/76 (35%), Gaps = 8/76 (10%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL 76
+++ I GI+ + + E INI + AI + + I
Sbjct: 105 IEIEPEPRAI--------GILAKIAQKIAEREINIVQVVAEDPELYPEAILTIITEKPIP 156
Query: 77 NSVLEKLSVNVTIRFV 92
++ +LS ++ +
Sbjct: 157 GDLINELSKLEGVKRI 172
>gi|258592117|emb|CBE68422.1| Acetolactate synthase small subunit (Acetohydroxy-acid synthase
small subunit) (AHAS) (ALS) [NC10 bacterium 'Dutch
sediment']
Length = 205
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSV 79
R +I ++ + G++ V ++ G NI +G + + L + D S++
Sbjct: 14 ARHIITLLVENHAGVLARVAALIAAKGYNIDSLTVGETMDPSISRMTLVVRGDDSVVEQA 73
Query: 80 LEKLSVNVTIRFVKQFE 96
+++L+ + + V
Sbjct: 74 VKQLNRLIDVIRVTDLT 90
>gi|226494640|ref|NP_001151166.1| acetolactate synthase/ amino acid binding protein [Zea mays]
gi|195644738|gb|ACG41837.1| acetolactate synthase/ amino acid binding protein [Zea mays]
Length = 483
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 28/69 (40%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D G++ + + G NI +G ++ + +LN V+E+L
Sbjct: 80 HTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTDRVLNQVIEQL 139
Query: 84 SVNVTIRFV 92
+ V + V
Sbjct: 140 NKLVNVLSV 148
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
+ I+ D G++ V + G NI +G ++ + + G++ +++
Sbjct: 314 HTLSILVNDCPGVLNIVTGVFARRGYNIQSLAVGPAEKEGISRITTVVPGTVESIEKLVQ 373
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V
Sbjct: 374 QLYKLIDVHEVHDIT 388
>gi|186682292|ref|YP_001865488.1| acetolactate synthase 3 regulatory subunit [Nostoc punctiforme
PCC 73102]
gi|186464744|gb|ACC80545.1| acetolactate synthase, small subunit [Nostoc punctiforme PCC
73102]
Length = 172
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + D ++ + +
Sbjct: 3 HTLSVLVEDEAGVLSRISGLFARRGFNIESLAVGPAEQGGVSRITMVVPGDDRVIEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L V + V+
Sbjct: 63 QLYKLVNVLKVQDIT 77
>gi|327399346|ref|YP_004340215.1| amino acid-binding ACT domain-containing protein [Hippea maritima
DSM 10411]
gi|327181975|gb|AEA34156.1| amino acid-binding ACT domain protein [Hippea maritima DSM 10411]
Length = 144
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 24/80 (30%), Gaps = 4/80 (5%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
D + ++ +I + D G + + L INI + + S
Sbjct: 54 DEAIKVLRDNGFTIS---ETNIIACIIDDKPGALAKILRTLANNQINIEYMYGFASPIQG 110
Query: 64 HAISFLCIDG-SILNSVLEK 82
A+ +LE+
Sbjct: 111 KAVMVFKFSELDKAEKILEE 130
>gi|302558216|ref|ZP_07310558.1| acetolactate synthase, small subunit [Streptomyces griseoflavus
Tu4000]
gi|302475834|gb|EFL38927.1| acetolactate synthase, small subunit [Streptomyces griseoflavus
Tu4000]
Length = 174
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNS 78
+ + + ++ + GI+ + + G NI +G ++ + + + ++ L
Sbjct: 1 MSKHTLSVLVENTPGILARIAALFSRRGFNIDSLAVGVTEHADISRITIVVSVEEFPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 VTKQLNKLVNVLKIVELE 78
>gi|224024474|ref|ZP_03642840.1| hypothetical protein BACCOPRO_01199 [Bacteroides coprophilus DSM
18228]
gi|224017696|gb|EEF75708.1| hypothetical protein BACCOPRO_01199 [Bacteroides coprophilus DSM
18228]
Length = 183
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + +I GI+ + + INI ++ S + I+ V++
Sbjct: 7 YTIIVHSENIAGILNQITAVFTRRQINIESLNVSASSIKGVHKYTITCWTTHDIVEKVVK 66
Query: 82 KLSVNVTIRFVKQFE 96
++ + + F
Sbjct: 67 QIEKKMDVIQAHYFS 81
>gi|119510892|ref|ZP_01630015.1| acetolactate synthase III small subunit [Nodularia spumigena
CCY9414]
gi|119464420|gb|EAW45334.1| acetolactate synthase III small subunit [Nodularia spumigena
CCY9414]
Length = 172
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + ++ G NI +G ++ + + + D ++ + +
Sbjct: 3 HTLSVLVEDEAGVLSRISSLFARRGFNIESLAVGPAEQGGVSRITMIVPGDDRVIEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L V + V
Sbjct: 63 QLYKLVNVLKVHDIT 77
>gi|94495396|ref|ZP_01301976.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Sphingomonas sp. SKA58]
gi|94424784|gb|EAT09805.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Sphingomonas sp. SKA58]
Length = 701
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 29/92 (31%), Gaps = 10/92 (10%)
Query: 10 IKIQEINFDVD------IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
++ + D+ G + ++ + G + V N+ G NI + L +
Sbjct: 608 VEQDDDWVDLSWDSKSKGGTARLSVIVKNQPGALAAVANVFGATKANILNLQLVNRE-GP 666
Query: 64 HAISFLCIDGSILN---SVLEKLSVNVTIRFV 92
+ ++ + +L L +
Sbjct: 667 FHTDVIDLEVADAQHLMRILSALRAIDVVVQA 698
>gi|28493242|ref|NP_787403.1| GTP pyrophosphokinase [Tropheryma whipplei str. Twist]
gi|28476283|gb|AAO44372.1| GTP pyrophosphokinase [Tropheryma whipplei str. Twist]
Length = 745
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKLSVNVTIR 90
+ ++ + + EY INI +L +Q D S L V+ ++ ++
Sbjct: 681 NRPDLINDITKVFSEYRINILSANLSTNQHRASNKFVCEAYDVSRLEKVMSEIRKIDSVY 740
Query: 91 FV 92
Sbjct: 741 DC 742
>gi|253998587|ref|YP_003050650.1| homoserine dehydrogenase [Methylovorus sp. SIP3-4]
gi|253985266|gb|ACT50123.1| Homoserine dehydrogenase [Methylovorus sp. SIP3-4]
Length = 437
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 4/72 (5%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI----DGSILN 77
+ + D G++ V ILG+ I+I + E + + ++
Sbjct: 352 SAYYLRLRAMDKPGVLAEVTRILGDRDISIDAMIQKEPEEGEDQADIIILTHVTVEKNMD 411
Query: 78 SVLEKLSVNVTI 89
S + + I
Sbjct: 412 SAIAAIEALPAI 423
>gi|296394417|ref|YP_003659301.1| acetolactate synthase small subunit [Segniliparus rotundus DSM
44985]
gi|296181564|gb|ADG98470.1| acetolactate synthase, small subunit [Segniliparus rotundus DSM
44985]
Length = 176
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSIL 76
I ++ ++ D G++ V ++ G NI +G ++ + + ++ +L
Sbjct: 6 APIQTRILSVLVEDKPGVLARVSSLFSRRGFNIDSLAVGPTEQPSISRMTITVTVEEPVL 65
Query: 77 NSVLEKLSVNVTIRFV 92
++++L+ V + +
Sbjct: 66 EQIVKQLNKLVNVIKI 81
>gi|242062268|ref|XP_002452423.1| hypothetical protein SORBIDRAFT_04g025560 [Sorghum bicolor]
gi|241932254|gb|EES05399.1| hypothetical protein SORBIDRAFT_04g025560 [Sorghum bicolor]
Length = 492
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 28/69 (40%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D G++ + + G NI +G ++ + +LN V+E+L
Sbjct: 88 HTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTDRVLNQVIEQL 147
Query: 84 SVNVTIRFV 92
+ V + V
Sbjct: 148 NKLVNVLSV 156
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
+ I+ D G++ V + G NI +G ++ + + G++ +++
Sbjct: 323 HTLSILVNDCPGVLNIVTGVFARRGYNIQSLAVGPAEKEGISRITTVVPGTVESIEKLVQ 382
Query: 82 KLSVNVTIRFVKQFE 96
+L V + V
Sbjct: 383 QLYKLVDVHEVHDIT 397
>gi|85082237|ref|XP_956872.1| acetolactate synthase small subunit, mitochondrial precursor
[Neurospora crassa OR74A]
gi|7800796|emb|CAB91255.1| probable ACETOLACTATE SYNTHASE SMALL SUBUNIT PRECURSOR [Neurospora
crassa]
gi|28917952|gb|EAA27636.1| acetolactate synthase small subunit, mitochondrial precursor
[Neurospora crassa OR74A]
Length = 330
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
R ++ + + G++ V IL G NI + ++ + + + + ++
Sbjct: 89 APPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVDDLSRMTIVLTGQDGVV 148
Query: 77 NSVLEKLSVN 86
+L
Sbjct: 149 EQARRQLEDL 158
>gi|313893081|ref|ZP_07826658.1| acetolactate synthase, small subunit [Veillonella sp. oral taxon
158 str. F0412]
gi|313442434|gb|EFR60849.1| acetolactate synthase, small subunit [Veillonella sp. oral taxon
158 str. F0412]
Length = 162
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVL 80
+ ++ + GI + + G N+ G + +A L + D IL+ V
Sbjct: 4 EHQVLVIAKNTPGIGTRILALFNRRGFNVTKMTSGITNKPGYARITLTVEADDRILDQVQ 63
Query: 81 EKLSVNVTIRFVKQFE 96
+++ + + VK FE
Sbjct: 64 KQIYKLIDVVKVKVFE 79
>gi|116073115|ref|ZP_01470377.1| Homoserine dehydrogenase:ACT domain [Synechococcus sp. RS9916]
gi|116068420|gb|EAU74172.1| Homoserine dehydrogenase:ACT domain [Synechococcus sp. RS9916]
Length = 442
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVNVT 88
D G++ +G+ G+ G++I + I + + + + L ++
Sbjct: 372 DDAPGVIGRIGSCFGDQGVSIQSIVQFDASDAGAEIVVITHEVSNGAMQAALSAITALPE 431
Query: 89 IRFV 92
+R V
Sbjct: 432 VRGV 435
>gi|70728485|ref|YP_258234.1| homoserine dehydrogenase [Pseudomonas fluorescens Pf-5]
gi|68342784|gb|AAY90390.1| homoserine dehydrogenase [Pseudomonas fluorescens Pf-5]
Length = 434
Score = 40.0 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 27/91 (29%), Gaps = 8/91 (8%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D G++ V +IL E GINI + L
Sbjct: 344 PIESCESAYYLRIQAKDHPGVLAQVASILSERGINIESIMQKEVEEQDGLVPMILLTHRV 403
Query: 75 ILNSVLEKLSVNVT-------IRFVKQFEFN 98
+ + + ++ + ++ N
Sbjct: 404 LEQHINDAITALEALQGVVGPVVRIRVEHLN 434
>gi|119961912|ref|YP_948232.1| acetolactate synthase 3 regulatory subunit [Arthrobacter
aurescens TC1]
gi|119948771|gb|ABM07682.1| acetolactate synthase, small subunit [Arthrobacter aurescens TC1]
Length = 170
Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNS 78
+ R + ++ D G++ V ++ NI +G ++ + + DG ++
Sbjct: 1 MSRHTLSVLVEDKPGVLTRVASLFARRAFNINSLAVGPTEVPGMSRMTVVVDADGDLIEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ V + + +
Sbjct: 61 VTKQLNKLVNVIKIVELT 78
>gi|84488855|ref|YP_447087.1| acetolactate synthase 3 regulatory subunit [Methanosphaera
stadtmanae DSM 3091]
gi|84372174|gb|ABC56444.1| IlvH1 [Methanosphaera stadtmanae DSM 3091]
Length = 165
Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I I+ + G++ + + NI + +G+++ + + D L + +
Sbjct: 6 HTISILVENKPGVLQRISGLFTRRNFNIDNITVGKTEEPTISRITIRTTGDNQTLEQITK 65
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V++ +
Sbjct: 66 QLNKLIEVLKVRELK 80
>gi|46202434|ref|ZP_00208513.1| COG2716: Glycine cleavage system regulatory protein
[Magnetospirillum magnetotacticum MS-1]
Length = 170
Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 21/67 (31%), Gaps = 5/67 (7%)
Query: 10 IKIQEINFDVD--IGR---LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
I ++ D + + D G+V + + GE+ NI R
Sbjct: 75 ISVRTFEMDAAHGPAGTITHRVVVSGGDRPGLVARLSEVFGEFQANIVRMDAQRLPDQGI 134
Query: 65 AISFLCI 71
++ +
Sbjct: 135 YVTRFSV 141
>gi|295690027|ref|YP_003593720.1| (p)ppGpp synthetase I [Caulobacter segnis ATCC 21756]
gi|295431930|gb|ADG11102.1| (p)ppGpp synthetase I, SpoT/RelA [Caulobacter segnis ATCC 21756]
Length = 741
Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 8/74 (10%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS----- 78
+ + G++ V I+GE G NI + + QS ID + ++
Sbjct: 666 TRLHATIQNAPGVLGQVCTIIGEAGGNIVNLRMHHRQSD---FFDTDIDVEVRDAKHLTN 722
Query: 79 VLEKLSVNVTIRFV 92
+ L ++ V
Sbjct: 723 IQAALRACPSVETV 736
>gi|307293951|ref|ZP_07573795.1| (p)ppGpp synthetase I, SpoT/RelA [Sphingobium chlorophenolicum L-1]
gi|306880102|gb|EFN11319.1| (p)ppGpp synthetase I, SpoT/RelA [Sphingobium chlorophenolicum L-1]
Length = 701
Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 10/89 (11%)
Query: 13 QEINFDVD------IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
+ D+ G + ++ + G + V N+ G NI + L +
Sbjct: 611 DDDWVDLSWDSKSKGGTARLSVIVKNQPGALAAVTNVFGATKANILNLQLVNRE-GPFHT 669
Query: 67 SFLCI---DGSILNSVLEKLSVNVTIRFV 92
+ + D LN +L L T+
Sbjct: 670 DIIDLEVADAQHLNRILSALRGLDTVVQA 698
>gi|170738398|ref|YP_001767053.1| (p)ppGpp synthetase I, SpoT/RelA [Methylobacterium sp. 4-46]
gi|168192672|gb|ACA14619.1| (p)ppGpp synthetase I, SpoT/RelA [Methylobacterium sp. 4-46]
Length = 733
Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
Query: 14 EINFDVDIGRL-----MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
++ +DVD G I + + + G + ++ ++ NI + + R +
Sbjct: 643 DVRWDVDGGTHQRFPARIALQSINEPGSFAQIAQVIADHDGNIDNISMKRRSQ-DFTDVL 701
Query: 69 LCI---DGSILNSVLEKLSVNVTIRFVKQFE 96
+ + D LN+++ +L + V++
Sbjct: 702 IDLSVWDLKHLNAIISELRAKRVVSKVERVN 732
>gi|28572645|ref|NP_789425.1| GTP pyrophosphokinase [Tropheryma whipplei TW08/27]
gi|28410777|emb|CAD67163.1| GTP pyrophosphokinase [Tropheryma whipplei TW08/27]
Length = 740
Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKLSVNVTIR 90
+ ++ + + EY INI +L +Q D S L V+ ++ ++
Sbjct: 676 NRPDLINDITKVFSEYRINILSANLSTNQHRASNKFVCEAYDVSRLEKVMSEIRKIDSVY 735
Query: 91 FV 92
Sbjct: 736 DC 737
>gi|298290475|ref|YP_003692414.1| formyltetrahydrofolate deformylase [Starkeya novella DSM 506]
gi|296926986|gb|ADH87795.1| formyltetrahydrofolate deformylase [Starkeya novella DSM 506]
Length = 289
Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 22/64 (34%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
++ + D GIV V + L E G NI + + D + + +
Sbjct: 6 EPYVLTLSCPDRPGIVAAVASFLFERGGNILEAQQFDDTESGRFFMRVVFDRAADSGAIA 65
Query: 82 KLSV 85
+L
Sbjct: 66 ELKA 69
>gi|311744065|ref|ZP_07717871.1| acetolactate synthase small subunit [Aeromicrobium marinum DSM
15272]
gi|311313195|gb|EFQ83106.1| acetolactate synthase small subunit [Aeromicrobium marinum DSM
15272]
Length = 176
Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ + G++ V ++ G NI +G ++ E + + +D L V +
Sbjct: 4 HTLSVLVENTPGVLARVSSLFMRRGFNIESLAVGPTEIPEISRMTIVVNVDELPLEQVTK 63
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 64 QLNKLVNVLKI 74
>gi|260427413|ref|ZP_05781392.1| acetolactate synthase, small subunit [Citreicella sp. SE45]
gi|260421905|gb|EEX15156.1| acetolactate synthase, small subunit [Citreicella sp. SE45]
Length = 187
Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
I ++ + G++ V + G NI + H +S + I + V+E
Sbjct: 27 EAHTITVLVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHEGH-LSRITIVTTGTPQVIE 85
Query: 82 KLSV-NVTIRFVKQFE 96
++ I V+
Sbjct: 86 QIKAQLGRIVSVRDVH 101
>gi|255261718|ref|ZP_05341060.1| homoserine dehydrogenase [Thalassiobium sp. R2A62]
gi|255104053|gb|EET46727.1| homoserine dehydrogenase [Thalassiobium sp. R2A62]
Length = 431
Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ ++ D G + + +LGE GI+I + A + + ++
Sbjct: 347 APAPYYLRMMLDDKPGALAKIATVLGEAGISIDRMRQY-DHAGGTAPVLIVTHKTTREAL 405
Query: 80 LEKLSVNVTIR 90
+S +
Sbjct: 406 DSAISGFEATK 416
>gi|91772732|ref|YP_565424.1| acetolactate synthase 3 regulatory subunit [Methanococcoides
burtonii DSM 6242]
gi|91711747|gb|ABE51674.1| acetolactate synthase, small subunit [Methanococcoides burtonii
DSM 6242]
Length = 161
Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +G ++ + + + D +L V++
Sbjct: 3 HTLAVLVENKYGVLARVAGLFSRRGFNIDSLAVGTTEDPTLSRMTIIVSGDDHVLEQVMK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 63 QLNKLIDVIRV 73
>gi|163857059|ref|YP_001631357.1| homoserine dehydrogenase [Bordetella petrii DSM 12804]
gi|163260787|emb|CAP43089.1| hom [Bordetella petrii]
Length = 452
Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G++ + IL E GI+I S I FL ++
Sbjct: 364 PIDKVSTSYYLRLRVDDQPGVLADIARILAERGISIGSMIQQPSHIGGADIIFL-THQAV 422
Query: 76 LNSVLEKLSVNVTIRFVK 93
+V + + + FV+
Sbjct: 423 EGNVDQAIRSIEQLPFVR 440
>gi|313200659|ref|YP_004039317.1| homoserine dehydrogenase [Methylovorus sp. MP688]
gi|312439975|gb|ADQ84081.1| Homoserine dehydrogenase [Methylovorus sp. MP688]
Length = 437
Score = 39.6 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 4/72 (5%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI----DGSILN 77
+ + D G++ V ILG+ I+I + E + + ++
Sbjct: 352 SAYYLRLRAMDKPGVLAEVTRILGDRDISIDAMIQKEPEEGEDQADIIILTHVTVEKNMD 411
Query: 78 SVLEKLSVNVTI 89
S + + I
Sbjct: 412 SAIAAIEALPAI 423
>gi|315230630|ref|YP_004071066.1| hypothetical protein TERMP_00866 [Thermococcus barophilus MP]
gi|315183658|gb|ADT83843.1| hypothetical protein TERMP_00866 [Thermococcus barophilus MP]
Length = 166
Score = 39.6 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 27/76 (35%), Gaps = 8/76 (10%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL 76
+++ I GI+ + + E GINI + A + + I
Sbjct: 96 IEIEPEPRAI--------GILAKIAGKIAERGINIIQVVAEDPELYPEATLTIITEKPIP 147
Query: 77 NSVLEKLSVNVTIRFV 92
++ +LS ++ +
Sbjct: 148 GDLINELSKLEGVKRI 163
>gi|282861111|ref|ZP_06270176.1| Homoserine dehydrogenase [Streptomyces sp. ACTE]
gi|282563769|gb|EFB69306.1| Homoserine dehydrogenase [Streptomyces sp. ACTE]
Length = 435
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 30/92 (32%), Gaps = 12/92 (13%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLG----RSQSTEHAI 66
V ++ + D G++ V + E G++I ++ A
Sbjct: 338 RLPVSPMGDVVTRYHISLDVADKPGVLAQVATVFAEQGVSIDTVRQQSRPDSQETGGEAS 397
Query: 67 SFLCIDGSILNSV---LEKLSVNVTIRFVKQF 95
+ ++ ++ +E L T+R V
Sbjct: 398 LVVVTHRALDAALSGTVEALRKLDTVRGVASI 429
>gi|167746626|ref|ZP_02418753.1| hypothetical protein ANACAC_01337 [Anaerostipes caccae DSM 14662]
gi|167653586|gb|EDR97715.1| hypothetical protein ANACAC_01337 [Anaerostipes caccae DSM 14662]
Length = 758
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCIDGSIL-NSVLEKL 83
I I + G++ V + E I+I ++ S+ +S I+G N V+ ++
Sbjct: 685 ISIYANNRKGMLADVSKVFLELDIDILTMNVSNSKKGRATLSMSFDINGVAQLNQVIARI 744
Query: 84 SVNVTIRFV 92
+ +
Sbjct: 745 RNIEGVVDI 753
>gi|126665071|ref|ZP_01736054.1| homoserine dehydrogenase [Marinobacter sp. ELB17]
gi|126630441|gb|EBA01056.1| homoserine dehydrogenase [Marinobacter sp. ELB17]
Length = 433
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 32/96 (33%), Gaps = 8/96 (8%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+ + + + I D G++ + IL + GINI + + I +
Sbjct: 338 NLPVLEMEDVQSAYYLRITAFDRPGVLANIAAILSDSGINIESIMQKEFEVKDGRIPVII 397
Query: 71 IDGSILNS----VLEKLSVNVTI----RFVKQFEFN 98
+ ++ + +L I ++ FN
Sbjct: 398 LTHTVQERQMNGAIAELENLPDIDGQVVRIRAENFN 433
>gi|77919052|ref|YP_356867.1| homoserine dehydrogenase [Pelobacter carbinolicus DSM 2380]
gi|77545135|gb|ABA88697.1| homoserine dehydrogenase [Pelobacter carbinolicus DSM 2380]
Length = 436
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 25/62 (40%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D G+V + ILG YGI IA + +E + + + + L+ +
Sbjct: 362 DKPGVVAKISGILGNYGIGIASMIQPDRKKSEAVPLVIMTHEATEALISDALADIDKLDT 421
Query: 92 VK 93
V+
Sbjct: 422 VR 423
>gi|84488858|ref|YP_447090.1| acetolactate synthase 3 regulatory subunit [Methanosphaera
stadtmanae DSM 3091]
gi|84372177|gb|ABC56447.1| IlvH2 [Methanosphaera stadtmanae DSM 3091]
Length = 165
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I I+ + G++ + + NI + +G+++ + + D L + +
Sbjct: 6 HTISILVENKPGVLQRISGLFTRRNFNIDNITVGKTEEPTISRITIRTTGDNQTLEQITK 65
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V++ +
Sbjct: 66 QLNKLIEVLKVRELK 80
>gi|307111238|gb|EFN59473.1| hypothetical protein CHLNCDRAFT_29593 [Chlorella variabilis]
Length = 399
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSV 79
++ I D+ G++ V + G N+ +G S+ + + + S ++
Sbjct: 225 EPDVLAIEVQDVPGVLNQVTGVFARRGYNVQSLAVGNSEREGMSRITIVVPASTSSIANL 284
Query: 80 LEKLSVNVTIRFVKQFEF 97
+++L+ V + V++
Sbjct: 285 IKQLNKLVYVENVEELTL 302
>gi|209964608|ref|YP_002297523.1| homoserine dehydrogenase [Rhodospirillum centenum SW]
gi|209958074|gb|ACI98710.1| homoserine dehydrogenase [Rhodospirillum centenum SW]
Length = 430
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 39/102 (38%), Gaps = 6/102 (5%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F R + + D GR + ++ D G++ V +L ++ +++ F L R ++
Sbjct: 328 FGVPAERLVPLPASPIDSRRGRYYLRLMVVDRPGVIADVAALLRDHNVSMEAF-LQRGRA 386
Query: 62 TEHAISFL----CIDGSILNSVLEKLSVNVTIRF-VKQFEFN 98
A+ + D + + L ++ T+ +
Sbjct: 387 PGEAVPVVLTTHETDEAAMQRALAQIGALDTVLEPPRLIRIE 428
>gi|289620285|emb|CBI53143.1| unnamed protein product [Sordaria macrospora]
Length = 318
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
R ++ + + G++ V IL G NI + ++ + + + + ++
Sbjct: 76 APPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVDDLSRMTIVLTGQDGVV 135
Query: 77 NSVLEKLSVN 86
+L
Sbjct: 136 EQARRQLEDL 145
>gi|91792909|ref|YP_562560.1| PII uridylyl-transferase [Shewanella denitrificans OS217]
gi|91714911|gb|ABE54837.1| protein-P-II uridylyltransferase [Shewanella denitrificans OS217]
Length = 861
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 6/73 (8%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSV 79
G + I + D + V +L IN+ A+ + L DG
Sbjct: 675 GGTELFIYSKDKPKLFATVMTVLDNKNINVHDANIMTSKDNYALDTFVILEQDG----ET 730
Query: 80 LEKLSVNVTIRFV 92
+ +LS +IR
Sbjct: 731 ISQLSRIQSIRKA 743
>gi|296444869|ref|ZP_06886831.1| (p)ppGpp synthetase I, SpoT/RelA [Methylosinus trichosporium OB3b]
gi|296257537|gb|EFH04602.1| (p)ppGpp synthetase I, SpoT/RelA [Methylosinus trichosporium OB3b]
Length = 737
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 14 EINFDVDIG-----RLMICIVNADILGIVVFVGNILGEYGINIAH--FHLGRSQSTEHAI 66
++ +D+D + + + G + + ++GE G NI + F + E
Sbjct: 647 DVRWDIDPESRELFPATLLVTAINEPGTLGALATVIGEAGANIDNVSFSVHSPDFREMRF 706
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
D LN ++ +L + + V++
Sbjct: 707 DLEVADLKHLNDIIARLRASALVSKVERVN 736
>gi|254785342|ref|YP_003072771.1| GTP pyrophosphokinase [Teredinibacter turnerae T7901]
gi|237686776|gb|ACR14040.1| GTP pyrophosphokinase [Teredinibacter turnerae T7901]
Length = 747
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFH-LGRSQST--EHAISFLCIDGSILNSVLE 81
I + D G++ + +L IN++ L + + D S L+ V+
Sbjct: 672 TIALEAFDRHGLLRDITTLLDREKINVSAMQTLSNKSKNTVDMTLQIEITDYSELSRVIA 731
Query: 82 KLSVNVTIRFVK 93
KL+ + V+
Sbjct: 732 KLNHLPNVSAVR 743
>gi|220930795|ref|YP_002507704.1| acetolactate synthase, small subunit [Clostridium cellulolyticum
H10]
gi|220001123|gb|ACL77724.1| acetolactate synthase, small subunit [Clostridium cellulolyticum
H10]
Length = 169
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNS 78
+ + + ++ + G++ V + G NI +G +++ E + + +DG +
Sbjct: 1 MAKHTLSVLVENRSGVLSRVAGLFSRRGFNIESLAVGVTENPEVSRMTIVVDGDEYTVEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ + I ++ E
Sbjct: 61 VSKQLNKLIDIIKIRALE 78
>gi|300783608|ref|YP_003763899.1| acetolactate synthase I/III small subunit [Amycolatopsis
mediterranei U32]
gi|299793122|gb|ADJ43497.1| acetolactate synthase I/III small subunit [Amycolatopsis
mediterranei U32]
Length = 168
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ + G++ V + G NI +G +++ E + + ++ L V +
Sbjct: 4 HTLSVLVENKPGVLARVSGLFSRRGFNIESLAVGPTENPEVSRMTIVVAVEELPLEQVTK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + + + E
Sbjct: 64 QLNKLVNVIKIVELE 78
>gi|295695586|ref|YP_003588824.1| Homoserine dehydrogenase [Bacillus tusciae DSM 2912]
gi|295411188|gb|ADG05680.1| Homoserine dehydrogenase [Bacillus tusciae DSM 2912]
Length = 431
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVNV 87
D G++ V +LG+YG++IA L +S + A + + S+ + +L +
Sbjct: 361 DRPGVLGAVATVLGQYGVSIASM-LQKSSQGDLA-EIVVVTHSVRQGNLMDAVARLRDHE 418
Query: 88 TIRFVKQ 94
+ V
Sbjct: 419 VVHTVHA 425
>gi|302524954|ref|ZP_07277296.1| acetolactate synthase, small subunit [Streptomyces sp. AA4]
gi|302433849|gb|EFL05665.1| acetolactate synthase, small subunit [Streptomyces sp. AA4]
Length = 168
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ + G++ V + G NI +G +++ E + + ++ L V +
Sbjct: 4 HTLSVLVENKPGVLARVSGLFSRRGFNIESLAVGPTENPEVSRMTIVVAVEELPLEQVTK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + + + E
Sbjct: 64 QLNKLVNVIKIVELE 78
>gi|20466646|gb|AAM20640.1| translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 449
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 26/105 (24%)
Query: 13 QEINFDVDIGRLMIC------------------IVNADILGIVVFVGNILGEYGINIAHF 54
+ R + + AD G++ V IL E G+NIA
Sbjct: 294 DGHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILRENGLNIARA 353
Query: 55 HLGRSQSTEHAISFLCIDGS----ILNSVLEKLSVNVTI--RFVK 93
+ S A + + + I +++ + + I VK
Sbjct: 354 EISTKDS--IARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVK 396
>gi|78356612|ref|YP_388061.1| metal dependent phosphohydrolase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78219017|gb|ABB38366.1| metal dependent phosphohydrolase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 715
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 25/71 (35%), Gaps = 5/71 (7%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLE 81
M+C + +G + +L E +NI H+ + + + + ++
Sbjct: 640 HMLCH---NEIGGFAKITTLLAEEQVNIDACHMRSNVDGRSELDVTVEVRDVAHLYRTID 696
Query: 82 KLSVNVTIRFV 92
+L + V
Sbjct: 697 RLRHLDAVIEV 707
>gi|197284126|ref|YP_002149998.1| GDP/GTP pyrophosphokinase [Proteus mirabilis HI4320]
gi|227358008|ref|ZP_03842350.1| GTP pyrophosphokinase [Proteus mirabilis ATCC 29906]
gi|194681613|emb|CAR40620.1| GTP pyrophosphokinase [Proteus mirabilis HI4320]
gi|227161743|gb|EEI46775.1| GTP pyrophosphokinase [Proteus mirabilis ATCC 29906]
Length = 746
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + + + + + D G++ + IL +N+ + A
Sbjct: 654 RIV--DAVWGENYSSGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVSSRSDVKQQIA 711
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L +L KL+ + K+F
Sbjct: 712 TIDMNIEIYNLQVLGRILAKLNQLPDVIEAKRFS 745
>gi|22328873|ref|NP_194009.2| ACR7; amino acid binding [Arabidopsis thaliana]
gi|22138104|gb|AAM93432.1| ACR7 [Arabidopsis thaliana]
gi|115646767|gb|ABJ17111.1| At4g22780 [Arabidopsis thaliana]
Length = 449
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 26/105 (24%)
Query: 13 QEINFDVDIGRLMIC------------------IVNADILGIVVFVGNILGEYGINIAHF 54
+ R + + AD G++ V IL E G+NIA
Sbjct: 294 DGHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILRENGLNIARA 353
Query: 55 HLGRSQSTEHAISFLCIDGS----ILNSVLEKLSVNVTI--RFVK 93
+ S A + + + I +++ + + I VK
Sbjct: 354 EISTKDS--IARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVK 396
>gi|307595095|ref|YP_003901412.1| threonine dehydratase [Vulcanisaeta distributa DSM 14429]
gi|307550296|gb|ADN50361.1| threonine dehydratase [Vulcanisaeta distributa DSM 14429]
Length = 412
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQST---EHAISFLCIDGSILNSVLEKLSVNVT 88
D G++ V +ILGE G+NI R T +A ++ +K+
Sbjct: 342 DRPGMLGRVTSILGELGVNILDVFHERFDPTITPGYAEVSFIVELPPEEDAAKKV----- 396
Query: 89 IRFVKQFEFN 98
I +++ FN
Sbjct: 397 ISRLRELGFN 406
>gi|297530102|ref|YP_003671377.1| formyltetrahydrofolate deformylase [Geobacillus sp. C56-T3]
gi|297253354|gb|ADI26800.1| formyltetrahydrofolate deformylase [Geobacillus sp. C56-T3]
Length = 300
Score = 39.6 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I I D GIV V + L E G NI L D + E++
Sbjct: 21 RILISCPDRPGIVAAVTSFLYEQGANIVESSQYSTDPEGGTFFLRLEFDCPNIAEQKEEI 80
Query: 84 SV 85
Sbjct: 81 EA 82
>gi|283132359|dbj|BAI63585.1| ACT-domain-containing protein kinase [Lotus japonicus]
Length = 578
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 6/77 (7%)
Query: 12 IQEINFDVDIGR----LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
I E + + I D ++ + +L E G+NI H + +++
Sbjct: 168 IDERSVHASVQYSRPMHEITFSTEDKPKLLSQLTALLAEIGLNIQEAHAFSTSD-GYSLD 226
Query: 68 FLCIDGSILNSVLEKLS 84
+DG EKL
Sbjct: 227 VFVVDGWPYEET-EKLK 242
>gi|224098798|ref|XP_002311270.1| predicted protein [Populus trichocarpa]
gi|222851090|gb|EEE88637.1| predicted protein [Populus trichocarpa]
Length = 414
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 30/73 (41%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ R I + D GI+ + + G NI +G ++ +C +L V
Sbjct: 1 RLQRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALFTIVVCGTEKVLRQV 60
Query: 80 LEKLSVNVTIRFV 92
+E+L+ V + V
Sbjct: 61 VEQLNKLVNVIKV 73
>gi|85705204|ref|ZP_01036303.1| homoserine dehydrogenase [Roseovarius sp. 217]
gi|85670077|gb|EAQ24939.1| homoserine dehydrogenase [Roseovarius sp. 217]
Length = 428
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 23/71 (32%), Gaps = 2/71 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSIL 76
+ + D G + V LGE GI+I R +T + + L
Sbjct: 344 ATPAPYYMRMSLIDKPGALAKVATCLGEAGISIDRMRQYRHDATTAPVLIVTHKTTRDAL 403
Query: 77 NSVLEKLSVNV 87
+ L +S
Sbjct: 404 ETALSAISRLD 414
>gi|224437654|ref|ZP_03658601.1| homoserine dehydrogenase [Helicobacter cinaedi CCUG 18818]
Length = 432
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ + D G++ V ILG + I+I F + A + L
Sbjct: 353 RLYVR--DKPGVLGEVAQILGRHNISIGAFLQKETDKKNIATMLFSTHHCFEREINHALC 410
Query: 85 VNVTIRFVKQ 94
I + Q
Sbjct: 411 ELENIESITQ 420
>gi|156742459|ref|YP_001432588.1| malate dehydrogenase [Roseiflexus castenholzii DSM 13941]
gi|156233787|gb|ABU58570.1| Malate dehydrogenase (oxaloacetate-decarboxylating) [Roseiflexus
castenholzii DSM 13941]
Length = 473
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 8/68 (11%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCIDGSI-LNSVLEK 82
I + G++ + +GE G NI + R + + + + ++ +
Sbjct: 13 TIRCQIDNRPGMLGTIATAIGENGGNIGAIDIVRVDRKHIVRDITVRVQDELHGDRIVRR 72
Query: 83 LSVNVTIR 90
++ +
Sbjct: 73 INALPGVV 80
>gi|18313244|ref|NP_559911.1| hypothetical protein PAE2296 [Pyrobaculum aerophilum str. IM2]
gi|18160763|gb|AAL64093.1| hypothetical protein PAE2296 [Pyrobaculum aerophilum str. IM2]
Length = 218
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
+ +N D GI+ + NI E+ +NI + + + + + + V E
Sbjct: 18 GEFLVELNFDQPGILATLSNIFAEHDVNIINIAI--DSERQKLHFIVDLTVTSEEQVGEI 75
Query: 83 LSVNVTIRFVKQFEFNV 99
+ FVK+ ++ V
Sbjct: 76 VKQLQMFAFVKKVKYRV 92
>gi|119717614|ref|YP_924579.1| acetolactate synthase 3 regulatory subunit [Nocardioides sp.
JS614]
gi|119538275|gb|ABL82892.1| acetolactate synthase, small subunit [Nocardioides sp. JS614]
Length = 184
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ + G++ + + G NI +G ++ E + + ++ S L V +
Sbjct: 9 HTLSVLVENKPGVLARIAGLFSRRGFNIDSLAVGPTEHPEVSRMTIVVNVEDSPLEQVTK 68
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 69 QLNKLVEVIKI 79
>gi|224010391|ref|XP_002294153.1| GTP pyrophosphokinase [Thalassiosira pseudonana CCMP1335]
gi|220970170|gb|EED88508.1| GTP pyrophosphokinase [Thalassiosira pseudonana CCMP1335]
Length = 719
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 36/92 (39%), Gaps = 4/92 (4%)
Query: 5 GKPRFIKI--QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ R + I + + + + ++ D G + + + G NI + +L + +
Sbjct: 625 DEQRIVNIRWDDDPSLMTSRPVQLRVLMEDSPGTLSNLSRAITSVGFNIGNVNLKKLSNG 684
Query: 63 EHAISFLCIDGSILN--SVLEKLSVNVTIRFV 92
E + + ++ + +V+ K+ I V
Sbjct: 685 EGSARIEVMLKNVEDLRNVVNKIQHEDGIISV 716
>gi|55377237|ref|YP_135087.1| acetolactate synthase small subunit [Haloarcula marismortui ATCC
43049]
gi|55229962|gb|AAV45381.1| acetolactate synthase small subunit [Haloarcula marismortui ATCC
43049]
Length = 199
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 33 ILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLEKLSVNVTIR 90
G++ V + NI +G + + A + I+ + ++L V +
Sbjct: 49 RPGVLSEVSALFSRRQFNIESLTVGPTVDDDTARMTILIEEPEPGIDQAKKQLQKLVPVI 108
Query: 91 FVKQFE 96
V++ E
Sbjct: 109 SVRELE 114
>gi|15791106|ref|NP_280930.1| hypothetical protein VNG2296C [Halobacterium sp. NRC-1]
gi|10581709|gb|AAG20410.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
Length = 162
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D GIV V +L ++GI I + T+ ++ D + +V L+ +R
Sbjct: 99 DEPGIVAAVTGLLADHGIPIRQTISEDPEFTDEPRLYVVTDEELPGAVFTALAEMSAVRS 158
Query: 92 V 92
V
Sbjct: 159 V 159
>gi|54026202|ref|YP_120444.1| acetolactate synthase 3 regulatory subunit [Nocardia farcinica
IFM 10152]
gi|54017710|dbj|BAD59080.1| putative acetolactate synthase small subunit [Nocardia farcinica
IFM 10152]
Length = 167
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ D G++ V ++ G NI +G ++ + + + ++ L V +
Sbjct: 5 HTLSVLVEDKPGVLARVASLFSRRGFNIESLAVGGTEIPDISRMTIVVTVEDLPLEQVTK 64
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 65 QLNKLVNVIKI 75
>gi|291517988|emb|CBK73209.1| ACT domain-containing protein [Butyrivibrio fibrisolvens 16/4]
Length = 147
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI--DGS 74
D+ + + I D GI+ V + + + +NI H + ++ + + D
Sbjct: 64 DIKGKTVNMVIQLEDEPGILSRVLDEMAHFHVNILTIHQSIPVNGFATLTISVDVLEDSG 123
Query: 75 ILNSVLEKLSVNVTIRFVKQF 95
++ + + +VK
Sbjct: 124 DFADLVSAIEAVDGVHYVKIL 144
>gi|167749684|ref|ZP_02421811.1| hypothetical protein EUBSIR_00642 [Eubacterium siraeum DSM 15702]
gi|167657307|gb|EDS01437.1| hypothetical protein EUBSIR_00642 [Eubacterium siraeum DSM 15702]
gi|291556453|emb|CBL33570.1| acetolactate synthase, small subunit [Eubacterium siraeum
V10Sc8a]
Length = 157
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSV 79
R +I + + +G++ V + G NI ++ +++ + + D ++ +
Sbjct: 3 ERNVISVCVNNGIGVLGRVTGLFSRRGYNIISLNVAETENLGISRMTIVADGDEGVMEQL 62
Query: 80 LEKLSVNVTIRFVKQFE 96
+++L + VK
Sbjct: 63 VKQLRKLYDVSEVKVLH 79
>gi|220920086|ref|YP_002495387.1| (p)ppGpp synthetase I SpoT/RelA [Methylobacterium nodulans ORS
2060]
gi|219944692|gb|ACL55084.1| (p)ppGpp synthetase I, SpoT/RelA [Methylobacterium nodulans ORS
2060]
Length = 737
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + + G + ++ ++ NI + + R + + + D LN+++
Sbjct: 663 RIALQSINEPGSFAQIAQVIADHDGNIDNISMKRRSQ-DFTDVLIDLSVWDLKHLNAIVS 721
Query: 82 KLSVNVTIRFVKQFE 96
+L + V++
Sbjct: 722 ELRAKRVVSRVERVN 736
>gi|114330871|ref|YP_747093.1| homoserine dehydrogenase [Nitrosomonas eutropha C91]
gi|114307885|gb|ABI59128.1| homoserine dehydrogenase [Nitrosomonas eutropha C91]
Length = 438
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 28/88 (31%), Gaps = 8/88 (9%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
I + + + D G++ + IL + I+I+ E ++ + +
Sbjct: 346 IPMEAVETAYYLRLQVTDKPGVLADITRILADSEISISAMIQKEHADGEDKVNIIMLLHK 405
Query: 75 ILNS----VLEKLSVNVT----IRFVKQ 94
+EK+ I ++
Sbjct: 406 TREKNINTAIEKIQNLPAMADKIIRIRL 433
>gi|329119224|ref|ZP_08247911.1| homoserine dehydrogenase [Neisseria bacilliformis ATCC BAA-1200]
gi|327464571|gb|EGF10869.1| homoserine dehydrogenase [Neisseria bacilliformis ATCC BAA-1200]
Length = 436
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 9/78 (11%), Positives = 24/78 (30%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G++ + +L ++I A + ++
Sbjct: 346 PMDEITSSYYLRVQAEDKPGVLGQIAGLLAAQNVSIEALIQKGVLDGRTAEIVILTHSTV 405
Query: 76 LNSVLEKLSVNVTIRFVK 93
V ++ T+ V+
Sbjct: 406 EKHVKAAIAAIETLGTVR 423
>gi|313144101|ref|ZP_07806294.1| homoserine dehydrogenase [Helicobacter cinaedi CCUG 18818]
gi|313129132|gb|EFR46749.1| homoserine dehydrogenase [Helicobacter cinaedi CCUG 18818]
Length = 425
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ + D G++ V ILG + I+I F + A + L
Sbjct: 346 RLYVR--DKPGVLGEVAQILGRHNISIGAFLQKETDKKNIATMLFSTHHCFEREINHALC 403
Query: 85 VNVTIRFVKQ 94
I + Q
Sbjct: 404 ELENIESITQ 413
>gi|283782435|ref|YP_003373190.1| acetolactate synthase, small subunit [Pirellula staleyi DSM 6068]
gi|283440888|gb|ADB19330.1| acetolactate synthase, small subunit [Pirellula staleyi DSM 6068]
Length = 186
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ V ++ G++ + +L G NI +G +Q + + D +L V +
Sbjct: 3 HVLSAVVQNVPGVLAHISGMLASRGYNIDSLAVGETQEPNLSRMTFVVMGDDRVLEQVRK 62
Query: 82 KLSVNVTIRFV 92
+L VT+ V
Sbjct: 63 QLEKIVTVVRV 73
>gi|326506926|dbj|BAJ91504.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 18 DVDIGR---LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--- 71
D D + I+ D G++ V + G NI +G ++ + +
Sbjct: 109 DSDPTGFCSHTLSILVNDSPGVLNVVTGVFARRGYNIQSLAVGPAEKMGTSRITTVVPGN 168
Query: 72 DGSILNSVLEKLSVNVTIRFVKQ 94
D SI ++++L + + V
Sbjct: 169 DESIAK-LVQQLYKLIDVYEVNL 190
>gi|118617540|ref|YP_905872.1| acetolactate synthase 3 regulatory subunit [Mycobacterium
ulcerans Agy99]
gi|183981724|ref|YP_001850015.1| acetolactate synthase (small subunit) IlvN [Mycobacterium marinum
M]
gi|118569650|gb|ABL04401.1| acetolactate synthase (small subunit) IlvN [Mycobacterium
ulcerans Agy99]
gi|183175050|gb|ACC40160.1| acetolactate synthase (small subunit) IlvN [Mycobacterium marinum
M]
Length = 169
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 8/71 (11%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
+ ++ D G++ V + G NI +G ++ + + + + + +
Sbjct: 6 HTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATEQKDMSRMTIVVSAEATPLEQITK 65
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 66 QLNKLINVIKI 76
>gi|32476121|ref|NP_869115.1| acetolactate synthase small subunit [Rhodopirellula baltica SH 1]
gi|32446665|emb|CAD76501.1| probable acetolactate synthase small subunit [Rhodopirellula
baltica SH 1]
Length = 194
Score = 39.6 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSV 79
R ++ + ++ G++ + +L G NI +G ++ + + D +L+ V
Sbjct: 21 QRHLLSALVQNVPGVLAHISGMLASRGYNIDSLAVGETEDPTLSRMTFVVVGDDQVLDQV 80
Query: 80 LEKLSVNVTIRFVKQFEFNVD 100
++L + V+ + + +
Sbjct: 81 RKQLEKI--VTVVRVLDISSN 99
>gi|323140840|ref|ZP_08075753.1| acetolactate synthase, small subunit [Phascolarctobacterium sp.
YIT 12067]
gi|322414578|gb|EFY05384.1| acetolactate synthase, small subunit [Phascolarctobacterium sp.
YIT 12067]
Length = 179
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVL 80
++ IV + G+++ V + G NI +G +Q+ E + + D + V
Sbjct: 2 EQILSIVVRNQPGVLMRVAGMFSRRGFNIDSLAVGTTQNPEFSRMTVTMEADEPTIIQVT 61
Query: 81 EKLSVNVTIRFVKQF 95
++L+ V + VK
Sbjct: 62 KQLAKLVEVERVKVL 76
>gi|310792633|gb|EFQ28160.1| D-isomer specific 2-hydroxyacid dehydrogenase [Glomerella
graminicola M1.001]
Length = 471
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 26/72 (36%), Gaps = 5/72 (6%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + D + + ++ ++ G++ V ILG + ++ + A
Sbjct: 387 VNLRSLTLD-EPDHARVIYIHRNVPGVLRRVNEILGNHNVD----KQISDSKGDIAYLMA 441
Query: 70 CIDGSILNSVLE 81
+ + E
Sbjct: 442 DVSSVKAEDIKE 453
>gi|239928758|ref|ZP_04685711.1| acetolactate synthase 3 regulatory subunit [Streptomyces
ghanaensis ATCC 14672]
gi|291437080|ref|ZP_06576470.1| acetolactate synthase small subunit [Streptomyces ghanaensis ATCC
14672]
gi|291339975|gb|EFE66931.1| acetolactate synthase small subunit [Streptomyces ghanaensis ATCC
14672]
Length = 174
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNS 78
+ + + ++ + GI+ + + G NI +G ++ + + + ++ L
Sbjct: 1 MSKHTLSVLVENTPGILARIAALFSRRGFNIDSLAVGVTEHPDISRITIVVSVEEFPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 VTKQLNKLVNVLKIVELE 78
>gi|212223646|ref|YP_002306882.1| Hypothetical regulator of amino acid metabolism [Thermococcus
onnurineus NA1]
gi|212008603|gb|ACJ15985.1| Hypothetical regulator of amino acid metabolism [Thermococcus
onnurineus NA1]
Length = 166
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 26/76 (34%), Gaps = 8/76 (10%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL 76
+++ I GI+ + + E INI + A + + I
Sbjct: 96 IEIEPEPRAI--------GILAKIAQKIAERDINIIQVVAEDPELYPEATLTIITEKPIP 147
Query: 77 NSVLEKLSVNVTIRFV 92
++ +LS ++ +
Sbjct: 148 GDLINELSKLEGVKRI 163
>gi|189196802|ref|XP_001934739.1| acetolactate synthase small subunit, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187980618|gb|EDU47244.1| acetolactate synthase small subunit, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 324
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--IL 76
++ + + G++ V IL G NI + ++ + + + + G ++
Sbjct: 75 APPKSHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVDDLSRMTIVLQGQDGVI 134
Query: 77 NSVLEKLSVN 86
+L
Sbjct: 135 EQARRQLEDL 144
>gi|229543092|ref|ZP_04432152.1| acetolactate synthase, small subunit [Bacillus coagulans 36D1]
gi|229327512|gb|EEN93187.1| acetolactate synthase, small subunit [Bacillus coagulans 36D1]
Length = 173
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLSVNVT 88
+ G++ + +L + NI +GR+++ + + + D + ++L+ +
Sbjct: 11 NQSGVLNKITGVLAKRQFNIDSITVGRTETEGISRMTIVVNVEDDRQAEQLTKQLNKLID 70
Query: 89 IRFVKQFE 96
+ V+
Sbjct: 71 VIKVQDIT 78
>gi|302915473|ref|XP_003051547.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732486|gb|EEU45834.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 312
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
R ++ + + G++ V IL G NI + ++ + + + + ++
Sbjct: 73 APPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVKDLSRMTIVLTGQDGVV 132
Query: 77 NSVLEKLSVN 86
+L
Sbjct: 133 EQARRQLEDL 142
>gi|226945754|ref|YP_002800827.1| RelA/SpoT protein [Azotobacter vinelandii DJ]
gi|226720681|gb|ACO79852.1| RelA/SpoT protein [Azotobacter vinelandii DJ]
Length = 749
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 3/89 (3%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R I++ V + I I D G++ V +L IN+ + ++ A
Sbjct: 655 RIIQVSWGPVPVQTYPVDIFIRAYDRSGLLRDVSQVLLNERINVLAANTLSNKEDSTAQM 714
Query: 68 FLCIDGSILNSV---LEKLSVNVTIRFVK 93
L I+ L+++ L +++ + +
Sbjct: 715 VLTIEIPGLDALGRLLARIAQLPNVIEAR 743
>gi|159484278|ref|XP_001700185.1| acetolactate synthase, small subunit [Chlamydomonas reinhardtii]
gi|158272501|gb|EDO98300.1| acetolactate synthase, small subunit [Chlamydomonas reinhardtii]
Length = 489
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 31/87 (35%), Gaps = 8/87 (9%)
Query: 15 INFDVDI-----GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + +I I AD G++ V + G NI +G + +
Sbjct: 65 YRVETRPLEEGVEKHIISIFVADEPGLINRVAGVFARRGANIESLAVGLTVDKALFTVVV 124
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
+++ +++++L V+ E
Sbjct: 125 AGKANVVANLVKQLGKL---VKVRYVE 148
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 22/60 (36%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL 76
D + I D+ G++ V + G N+ +G S+ + + + G +
Sbjct: 308 LPADFKPYTLSIEVQDVPGVLNQVTMVFSRRGYNVQSLAVGPSEREGLSRIVMVVPGKVS 367
>gi|158522049|ref|YP_001529919.1| acetolactate synthase, small subunit [Desulfococcus oleovorans
Hxd3]
gi|158510875|gb|ABW67842.1| acetolactate synthase, small subunit [Desulfococcus oleovorans
Hxd3]
Length = 166
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
++ + ++ I+ + G++ + + G NI + + + + D +I+
Sbjct: 1 MNGTKHILSILVDNQPGVLSRIAGLFSGRGYNIESLCVATTTDPGISRLTMVTIGDEAIV 60
Query: 77 NSVLEKLSVNVTIRFV 92
+ ++L+ + + V
Sbjct: 61 EQIQKQLNKLINVIKV 76
>gi|258406049|ref|YP_003198791.1| Homoserine dehydrogenase [Desulfohalobium retbaense DSM 5692]
gi|257798276|gb|ACV69213.1| Homoserine dehydrogenase [Desulfohalobium retbaense DSM 5692]
Length = 430
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 23/62 (37%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + I+GE I+IA + + L V + LS +
Sbjct: 358 KDRPGVLSTISGIMGERNISIAQAVQKQEPQGGGVPVVFFSHAAQLKDVRDALSEIDGLS 417
Query: 91 FV 92
FV
Sbjct: 418 FV 419
>gi|78485556|ref|YP_391481.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Thiomicrospira crunogena XCL-2]
gi|78363842|gb|ABB41807.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Thiomicrospira crunogena XCL-2]
Length = 716
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 8 RFIKIQEINFDVDIGRLM----ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
R I++ N + + I+ D G++ + L ++ IN+ + +S
Sbjct: 617 RLIEVAWYN--AEPQGTTYEATLQILAFDRKGLLRDIMMELTQWDINVNNSDTRTDKSDG 674
Query: 64 HAISFLCIDGSILN---SVLEKLSVNVTIRF 91
L +D +L++L +
Sbjct: 675 SVSMTLDVDVEPHTNMGELLDQLEQIQNVVS 705
>gi|5931761|emb|CAB56614.1| acetolactate synthase small subunit [Nicotiana plumbaginifolia]
Length = 449
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE---HAISFLCIDGSILNSVL 80
+ ++ D G++ V + G NI +G ++ D S+ ++
Sbjct: 258 HTLSMLVNDTPGVLNIVTGVFARRGYNIQSLAVGHAEVEGLSRITTVVPGTDESVSK-LV 316
Query: 81 EKLSVNVTIRFVKQFE 96
++L V I V+
Sbjct: 317 QQLYKLVDIHEVRDIT 332
>gi|189190002|ref|XP_001931340.1| D-3-phosphoglycerate dehydrogenase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972946|gb|EDU40445.1| D-3-phosphoglycerate dehydrogenase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 483
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 29/87 (33%), Gaps = 4/87 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIA-HFHLGRSQSTEHAISF 68
+ ++ + D + + ++ ++ G++ V IL + NI R+
Sbjct: 399 VNLRSLTLD-QPDCMRVIYIHKNVPGVLRQVNGILLHH--NIEKQMSDSRNDIAYLMADI 455
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ++ L + +
Sbjct: 456 SEVKEGEIRDLVTSLEELSSCIRTRVL 482
>gi|298674692|ref|YP_003726442.1| acetolactate synthase small subunit [Methanohalobium evestigatum
Z-7303]
gi|298287680|gb|ADI73646.1| acetolactate synthase, small subunit [Methanohalobium evestigatum
Z-7303]
Length = 161
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +G + + + + + D +L V +
Sbjct: 3 HTLAVLVENKYGVLARVAGLFSRRGYNIDSLAVGITDDPDISRMSIVVHGDDHVLEQVTK 62
Query: 82 KLSVNVTIRFVKQF 95
+L+ V + V
Sbjct: 63 QLNKLVDVIRVTDL 76
>gi|52424296|ref|YP_087433.1| SpoT protein [Mannheimia succiniciproducens MBEL55E]
gi|52306348|gb|AAU36848.1| SpoT protein [Mannheimia succiniciproducens MBEL55E]
Length = 741
Score = 39.6 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLS 84
++ D G++ + +L I++A+ + A L I + IL V+ +L+
Sbjct: 671 VIANDRNGLLRDITTVLANDKISVANVTTRLDSKRQLATMDLEIQLKNVQILGKVITRLT 730
Query: 85 VNVTIRFVKQF 95
+ VK+
Sbjct: 731 KLDDVIEVKRL 741
>gi|302554334|ref|ZP_07306676.1| acetolactate synthase, small subunit [Streptomyces
viridochromogenes DSM 40736]
gi|302471952|gb|EFL35045.1| acetolactate synthase, small subunit [Streptomyces
viridochromogenes DSM 40736]
Length = 174
Score = 39.6 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNS 78
+ + + ++ + GI+ + + G NI +G ++ + + + ++ L
Sbjct: 1 MSKHTLSVLVENTPGILARIAALFSRRGFNIDSLAVGVTEHPDISRITIVVGVEDLPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 VTKQLNKLVNVLKIVELE 78
>gi|255037429|ref|YP_003088050.1| acetolactate synthase, small subunit [Dyadobacter fermentans DSM
18053]
gi|254950185|gb|ACT94885.1| acetolactate synthase, small subunit [Dyadobacter fermentans DSM
18053]
Length = 177
Score = 39.6 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 25/69 (36%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
IC+ + +GI+ + I INI + ++ + + I +V + +
Sbjct: 4 YTICVFTENSIGILNKITTIFTRRRINIESLTVSETERKGISRFTIVIRSESREAVEKLV 63
Query: 84 SVNVTIRFV 92
I V
Sbjct: 64 RQIRKIIEV 72
>gi|226312067|ref|YP_002771961.1| prephenate dehydrogenase [Brevibacillus brevis NBRC 100599]
gi|226095015|dbj|BAH43457.1| prephenate dehydrogenase [Brevibacillus brevis NBRC 100599]
Length = 367
Score = 39.6 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 9/66 (13%), Positives = 22/66 (33%), Gaps = 6/66 (9%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ I D G + + +LG INI + + ++ + + ++L
Sbjct: 298 LYIDIPDHPGEIGRITTLLGARNINITNLQIRETREDIFGVLRITFHSQ------QELEK 351
Query: 86 NVTIRF 91
+
Sbjct: 352 GEEVLR 357
>gi|171185907|ref|YP_001794826.1| amino acid-binding ACT domain-containing protein [Thermoproteus
neutrophilus V24Sta]
gi|170935119|gb|ACB40380.1| amino acid-binding ACT domain protein [Thermoproteus neutrophilus
V24Sta]
Length = 219
Score = 39.6 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
+ +N D GI+ + NI E+ +NI + + + H I+ L + + L++
Sbjct: 18 GEFLVELNFDQPGILATLSNIFAEHDVNIVNIAIDGPRRHLHFITDLTV---VSEEQLQE 74
Query: 83 L-SVNVTIRFVKQFE 96
+ FVK+
Sbjct: 75 IVKQLQMFAFVKKVR 89
>gi|154488784|ref|ZP_02029633.1| hypothetical protein BIFADO_02091 [Bifidobacterium adolescentis
L2-32]
gi|154082921|gb|EDN81966.1| hypothetical protein BIFADO_02091 [Bifidobacterium adolescentis
L2-32]
Length = 773
Score = 39.6 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LN++L + +
Sbjct: 694 DRPHLLSDVTRVLSDHGVNIISGSISTGTDRVATSQFSFEMADPQHLNTLLAAVRKIEGV 753
Query: 90 RFV 92
V
Sbjct: 754 FDV 756
>gi|114764688|ref|ZP_01443873.1| acetolactate synthase small subunit [Pelagibaca bermudensis
HTCC2601]
gi|114542888|gb|EAU45909.1| acetolactate synthase small subunit [Roseovarius sp. HTCC2601]
Length = 187
Score = 39.6 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
I ++ + G++ V + G NI + H +S + I + V+E
Sbjct: 27 EAHTITVLVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHEGH-LSRITIVTTGTPQVIE 85
Query: 82 KLSV-NVTIRFVKQFE 96
++ I V+
Sbjct: 86 QIKAQLGRIVSVRDVH 101
>gi|297622454|ref|YP_003703888.1| acetolactate synthase small subunit [Truepera radiovictrix DSM
17093]
gi|297163634|gb|ADI13345.1| acetolactate synthase, small subunit [Truepera radiovictrix DSM
17093]
Length = 176
Score = 39.6 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-- 76
+ + + ++ + D G+++ + + G NI + +S+ + + + G
Sbjct: 1 MSVHKHVLSVTVRDQPGVLMRIAGLFARRGFNIESLSVAQSEIPGISRTTFTVSGEDATI 60
Query: 77 NSVLEKLSVNVTIRFV 92
V ++L + + V
Sbjct: 61 EQVQKQLQKLIDVLKV 76
>gi|253699861|ref|YP_003021050.1| homoserine dehydrogenase [Geobacter sp. M21]
gi|251774711|gb|ACT17292.1| Homoserine dehydrogenase [Geobacter sp. M21]
Length = 436
Score = 39.6 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 20/56 (35%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
D G++ + LG GI+IA ++E + + V L+
Sbjct: 362 DRPGVLARIAGALGASGISIASMLQSARSASEIVPIVIMTHEAREADVRRALAEID 417
>gi|126739113|ref|ZP_01754807.1| acetolactate synthase III small subunit [Roseobacter sp. SK209-2-6]
gi|126719730|gb|EBA16438.1| acetolactate synthase III small subunit [Roseobacter sp. SK209-2-6]
Length = 187
Score = 39.6 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ + ++ + G++ V + G NI + T H +S + + V+E
Sbjct: 27 EQHTLAVLVENEPGVLARVIGLFSGRGYNIESLTVAEVDHTGH-LSRITVVTKGTPQVIE 85
Query: 82 KLSV-NVTIRFVKQFE 96
++ I V+
Sbjct: 86 QIKAQLGRIVSVRDVH 101
>gi|317153484|ref|YP_004121532.1| acetolactate synthase small subunit [Desulfovibrio aespoeensis
Aspo-2]
gi|316943735|gb|ADU62786.1| acetolactate synthase, small subunit [Desulfovibrio aespoeensis
Aspo-2]
Length = 163
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLE 81
+ ++ + G++ V + G NI ++ + ++ + D I+ +++
Sbjct: 4 HTLSVMVENEPGVLSRVSGLFSGRGFNIYSLNVAPTLEKGVSLMTIVAEGDDQIIEQIVK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L V VK
Sbjct: 64 QLRKLVPTIKVKDLT 78
>gi|257056969|ref|YP_003134801.1| homoserine dehydrogenase [Saccharomonospora viridis DSM 43017]
gi|256586841|gb|ACU97974.1| homoserine dehydrogenase [Saccharomonospora viridis DSM 43017]
Length = 435
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--- 76
R I + AD G++ V + +G++IA + + A + +
Sbjct: 351 TPTRYHISLDVADRPGVLAQVAQVFAAHGVSIAA--VRQRDERSTARLVVVTHLAPDAAL 408
Query: 77 NSVLEKLSVNVTIRFV 92
+ + ++S +R V
Sbjct: 409 EATVNEISKLDVVREV 424
>gi|269798495|ref|YP_003312395.1| acetolactate synthase, small subunit [Veillonella parvula DSM
2008]
gi|282849919|ref|ZP_06259302.1| acetolactate synthase, small subunit [Veillonella parvula ATCC
17745]
gi|294792845|ref|ZP_06757992.1| acetolactate synthase, small subunit [Veillonella sp. 6_1_27]
gi|294794601|ref|ZP_06759737.1| acetolactate synthase, small subunit [Veillonella sp. 3_1_44]
gi|269095124|gb|ACZ25115.1| acetolactate synthase, small subunit [Veillonella parvula DSM
2008]
gi|282580356|gb|EFB85756.1| acetolactate synthase, small subunit [Veillonella parvula ATCC
17745]
gi|294454931|gb|EFG23304.1| acetolactate synthase, small subunit [Veillonella sp. 3_1_44]
gi|294456744|gb|EFG25107.1| acetolactate synthase, small subunit [Veillonella sp. 6_1_27]
Length = 162
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVL 80
+ I+ + GI + + G N+ G + +A + + D IL+ V
Sbjct: 4 EHQVLIIAKNAPGIGTRILALFNRRGFNVTKMTSGITNQPGYARITITVEADDRILDQVQ 63
Query: 81 EKLSVNVTIRFVKQFE 96
+++ + + VK FE
Sbjct: 64 KQIYKLIDVVKVKVFE 79
>gi|255577893|ref|XP_002529819.1| acetolactate synthase, putative [Ricinus communis]
gi|223530696|gb|EEF32568.1| acetolactate synthase, putative [Ricinus communis]
Length = 493
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 26/69 (37%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D G++ + + G NI +G ++ + +L V+E+L
Sbjct: 91 HTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTERVLQQVVEQL 150
Query: 84 SVNVTIRFV 92
V + V
Sbjct: 151 QKLVNVMKV 159
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE---HAISFLCIDGSILNSVL 80
+ ++ D G++ V I G N+ +G S++ D SI ++
Sbjct: 324 HTLSMLVNDSPGVLNIVTGIFARRGYNVQSLAVGHSETEGLSRITTVVPGTDESISK-LV 382
Query: 81 EKLSVNVTIRFVKQFE 96
++L + + V+
Sbjct: 383 QQLYKLIDLHEVRDLT 398
>gi|303245492|ref|ZP_07331776.1| acetolactate synthase, small subunit [Desulfovibrio
fructosovorans JJ]
gi|302493341|gb|EFL53203.1| acetolactate synthase, small subunit [Desulfovibrio
fructosovorans JJ]
Length = 160
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ I+ D G++ V + G NI ++ + + ++ + D +I+ +++
Sbjct: 3 HILSILVEDEPGVLSRVAGLFSGRGYNIETLNVAPTLTEGLSMMTITTEGDEAIVEQIIK 62
Query: 82 KLSVNVTIRFV 92
+L VT V
Sbjct: 63 QLRKLVTTLKV 73
>gi|225562258|gb|EEH10538.1| D-3-phosphoglycerate dehydrogenase [Ajellomyces capsulatus G186AR]
Length = 471
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 8/79 (10%), Positives = 26/79 (32%), Gaps = 7/79 (8%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ + ++ +I G++ V IL ++ ++ + A I + +
Sbjct: 396 EPNHGRVIFIHQNIPGVLRKVNEILSDHNVD----KQMTDSRGDVAYLMADISDVHTSDI 451
Query: 80 LE---KLSVNVTIRFVKQF 95
+ +L + +
Sbjct: 452 KDLYNRLENLPSRIMTRIL 470
>gi|85373929|ref|YP_457991.1| acetolactate synthase 3 regulatory subunit [Erythrobacter
litoralis HTCC2594]
gi|84787012|gb|ABC63194.1| acetolactate synthase small subunit [Erythrobacter litoralis
HTCC2594]
Length = 171
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ R ++ + + GI+ + + G NI + +HAIS + + + V
Sbjct: 7 EAERHVLAVTVDNEPGILAKITGLFTARGYNIDSLTVADITE-DHAISRITVVTNGPPEV 65
Query: 80 LEKLSV 85
++++
Sbjct: 66 IDQIQA 71
>gi|323137549|ref|ZP_08072626.1| (p)ppGpp synthetase I, SpoT/RelA [Methylocystis sp. ATCC 49242]
gi|322397175|gb|EFX99699.1| (p)ppGpp synthetase I, SpoT/RelA [Methylocystis sp. ATCC 49242]
Length = 737
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST--EHAISFLCIDGSILNSVLEK 82
I + G + + ++GE G NI + E D L V+ +
Sbjct: 663 RIVATAMNEPGSLGALATLIGETGANIDNISFRAHSPDFREMTFDLEVADLKHLTDVIAR 722
Query: 83 LSVNVTIRFV-KQF 95
L + + V +
Sbjct: 723 LRASPLVSKVERVI 736
>gi|302542288|ref|ZP_07294630.1| acetolactate synthase, small subunit [Streptomyces hygroscopicus
ATCC 53653]
gi|302459906|gb|EFL22999.1| acetolactate synthase, small subunit [Streptomyces himastatinicus
ATCC 53653]
Length = 174
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNS 78
+ + + ++ + GI+ + + G NI +G ++ + + + ++ L
Sbjct: 1 MSKHTLSVLVENTPGILARIAALFSRRGFNIDSLAVGVTEHPDISRITIVVNVEELPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 VTKQLNKLVNVLKIVELE 78
>gi|15679246|ref|NP_276363.1| hypothetical protein MTH1235 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|11387243|sp|O27303|Y1235_METTH RecName: Full=Uncharacterized protein MTH_1235
gi|2622347|gb|AAB85724.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 218
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I + G++ + ++ INI AH ++ R + ID S++ +L
Sbjct: 6 LSIKTVERPGVLSEITGMIASRNINITYAHLYVERDGHGAIYMELEDIDDR--ESLINEL 63
Query: 84 SVNVTIRFVK 93
+ T+ VK
Sbjct: 64 KSSSTVLDVK 73
>gi|85710706|ref|ZP_01041770.1| guanosine polyphosphate pyrophosphohydrolase [Erythrobacter sp.
NAP1]
gi|85687884|gb|EAQ27889.1| guanosine polyphosphate pyrophosphohydrolase [Erythrobacter sp.
NAP1]
Length = 696
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 24/76 (31%), Gaps = 8/76 (10%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SV 79
+ + D G + + + + IN+ +H + ID + + +
Sbjct: 624 RLTVTIYDRPGTLAEMAGVFAQNKINVKSLI---QTQLDHPFTTYEIDAEVNDLAHLTRI 680
Query: 80 LEKLSVNVTIRFVKQF 95
L L + + +
Sbjct: 681 LSALRASDAVAQADRI 696
>gi|329936831|ref|ZP_08286510.1| acetolactate synthase 3 regulatory subunit [Streptomyces
griseoaurantiacus M045]
gi|329303756|gb|EGG47640.1| acetolactate synthase 3 regulatory subunit [Streptomyces
griseoaurantiacus M045]
Length = 175
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ + GI+ + + G NI +G ++ + + + ++ L V +
Sbjct: 5 HTLSVLVENTPGILARIAALFSRRGFNIDSLAVGVTEHPDISRITIVVSVEDLPLEQVTK 64
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + + + E
Sbjct: 65 QLNKLVNVLKIVELE 79
>gi|258513912|ref|YP_003190134.1| acetolactate synthase, small subunit [Desulfotomaculum
acetoxidans DSM 771]
gi|257777617|gb|ACV61511.1| acetolactate synthase, small subunit [Desulfotomaculum
acetoxidans DSM 771]
Length = 166
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +GR+ + + + D +L V +
Sbjct: 3 HTLAVLVENNPGVLARVSGLFSRRGFNIDSLAVGRTDDPTISRMTIVVEGDDQVLEQVRK 62
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 63 QLNKLVDVIKI 73
>gi|212715656|ref|ZP_03323784.1| hypothetical protein BIFCAT_00556 [Bifidobacterium catenulatum DSM
16992]
gi|212661023|gb|EEB21598.1| hypothetical protein BIFCAT_00556 [Bifidobacterium catenulatum DSM
16992]
Length = 773
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LN++L + +
Sbjct: 694 DRPHLLSDVTRVLSDHGVNIISGSISTGTDRVATSQFSFEMADPQHLNTLLAAVRKIEGV 753
Query: 90 RFV 92
V
Sbjct: 754 FDV 756
>gi|94501166|ref|ZP_01307689.1| homoserine dehydrogenase [Oceanobacter sp. RED65]
gi|94426742|gb|EAT11727.1| homoserine dehydrogenase [Oceanobacter sp. RED65]
Length = 426
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
+ + + D G++ V +IL GINI E + + + +
Sbjct: 336 PIEEVETGYYLRMQALDKAGVMARVASILSNNGINIEAIIQKEPAEGEILVPIIMLTHKV 395
Query: 76 LNSVL-EKLSVNVT 88
V+ + ++
Sbjct: 396 QEKVMNQAIAEIED 409
>gi|46123809|ref|XP_386458.1| hypothetical protein FG06282.1 [Gibberella zeae PH-1]
Length = 312
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
V R ++ + + G++ V IL G NI + ++ + + + + ++
Sbjct: 73 VPPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVEDLSRMTIVLTGQDGVV 132
Query: 77 NSVLEKLSVN 86
+L
Sbjct: 133 EQARRQLEDL 142
>gi|207723282|ref|YP_002253681.1| homoserine dehydrogenase protein [Ralstonia solanacearum MolK2]
gi|207743324|ref|YP_002259716.1| homoserine dehydrogenase protein [Ralstonia solanacearum IPO1609]
gi|206588480|emb|CAQ35443.1| homoserine dehydrogenase protein [Ralstonia solanacearum MolK2]
gi|206594721|emb|CAQ61648.1| homoserine dehydrogenase protein [Ralstonia solanacearum IPO1609]
Length = 439
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 5/72 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVNV 87
D G++ + IL E GI+I S E + + ++ + + +
Sbjct: 365 DETGVLADITRILAEAGISIDAMLQKESPEGEPQTDIIMLSHVVVEKQVNAAIAAIEALP 424
Query: 88 TIRF-VKQFEFN 98
T+ V +
Sbjct: 425 TVLSKVTRLRME 436
>gi|169236858|ref|YP_001690058.1| hypothetical protein OE4222F [Halobacterium salinarum R1]
gi|167727924|emb|CAP14712.1| conserved hypothetical protein [Halobacterium salinarum R1]
Length = 167
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D GIV V +L ++GI I + T+ ++ D + +V L+ +R
Sbjct: 104 DEPGIVAAVTGLLADHGIPIRQTISEDPEFTDEPRLYVVTDEELPGAVFTALAEMSAVRS 163
Query: 92 V 92
V
Sbjct: 164 V 164
>gi|78213474|ref|YP_382253.1| homoserine dehydrogenase [Synechococcus sp. CC9605]
gi|78197933|gb|ABB35698.1| Homoserine dehydrogenase [Synechococcus sp. CC9605]
Length = 435
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVNVT 88
D G++ VG G+ ++I + I + + +N L+ +
Sbjct: 365 KDAPGVIGNVGGCFGQRNVSIQSIVQFNASDAGAEIVVITHEVSQRQMNEALDAIQALPE 424
Query: 89 I 89
+
Sbjct: 425 V 425
>gi|119898372|ref|YP_933585.1| homoserine dehydrogenase [Azoarcus sp. BH72]
gi|119670785|emb|CAL94698.1| Hom protein [Azoarcus sp. BH72]
Length = 435
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 9/88 (10%), Positives = 26/88 (29%), Gaps = 5/88 (5%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
+ + + + D G++ + IL + I+I E + +
Sbjct: 346 PIEEVVTSYYLRLRVDDKPGVLADITRILADSDISIDAMIQKEPGEGEAQTDIIMLTHQT 405
Query: 76 LN----SVLEKLSVNVTIR-FVKQFEFN 98
+ + + K+ + V +
Sbjct: 406 VEKNANAAIAKIEALPVVVGKVTKLRLE 433
>gi|15615827|ref|NP_244131.1| formyltetrahydrofolate deformylase [Bacillus halodurans C-125]
gi|10175888|dbj|BAB06984.1| formyltetrahydrofolate deformylase [Bacillus halodurans C-125]
Length = 289
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I D GIV + L +G NI + D + + E L
Sbjct: 10 RLLISCHDQPGIVAAISTFLNHHGANIVQSDQYSTDPEGGRFFMRVEFDQNNDSITFEAL 69
Query: 84 S 84
Sbjct: 70 K 70
>gi|304313806|ref|YP_003848953.1| acetolactate synthase, small subunit [Methanothermobacter
marburgensis str. Marburg]
gi|302587265|gb|ADL57640.1| acetolactate synthase, small subunit [Methanothermobacter
marburgensis str. Marburg]
Length = 165
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSIL 76
+ +I + G++ V + G NI +G S++ A + D +L
Sbjct: 1 MKPDTHIISALVEHRPGVLQRVAGLFTRRGFNIESITVGESETPGIARMTIIARGDDRVL 60
Query: 77 NSVLEKLSVNVTIRFVKQFE 96
+ ++L+ + + V+ E
Sbjct: 61 EQITKQLNKLIDVIKVRDLE 80
>gi|225849721|ref|YP_002729955.1| acetolactate synthase, small subunit [Persephonella marina EX-H1]
gi|225645727|gb|ACO03913.1| acetolactate synthase, small subunit [Persephonella marina EX-H1]
Length = 188
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I + G++ + ++ G NI +G++ A + + D I+ +++
Sbjct: 21 HVIIVRVLHNFGVLTRITSLFAGRGYNIESLTVGKTNEPNIARITIVVEGDERIIEQIIK 80
Query: 82 KLSVNVTIRFVKQFE 96
+L + V+
Sbjct: 81 QLRKLIETVRVRDIT 95
>gi|225181134|ref|ZP_03734580.1| acetolactate synthase, small subunit [Dethiobacter alkaliphilus
AHT 1]
gi|225168103|gb|EEG76908.1| acetolactate synthase, small subunit [Dethiobacter alkaliphilus
AHT 1]
Length = 168
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
++ ++ + G++V V + G NI +G++ + + +D V++
Sbjct: 4 YVLAVLVENKPGVLVRVAGLFARRGFNIESLAVGKTLDPGISRMTIEVDADEKTLEQVIK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + +
Sbjct: 64 QLNKLINVIRISNLT 78
>gi|213615601|ref|ZP_03371427.1| GDP/GTP pyrophosphokinase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 99
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R ++ + + + + D G++ + IL +N+ + A
Sbjct: 6 RIVE--AVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIA 63
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVKQFE 96
+ I+ +L VL KL+ + ++
Sbjct: 64 TIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLH 97
>gi|258544689|ref|ZP_05704923.1| chorismate mutase/prephenate dehydratase [Cardiobacterium hominis
ATCC 15826]
gi|258520107|gb|EEV88966.1| chorismate mutase/prephenate dehydratase [Cardiobacterium hominis
ATCC 15826]
Length = 362
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 10/82 (12%)
Query: 20 DIGRL---MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCIDGS 74
I + + + G++ + +G +GIN+ R I F+ +DG
Sbjct: 272 SPSGHDKTTILVSSQNRPGLLYKLLEPIGRHGINMTRIE-SRPSKQGIWEYIFFIDLDGH 330
Query: 75 ILN----SVLEKLSVNVTIRFV 92
++L ++ + ++ V
Sbjct: 331 QSEPQMQALLAEIEDSASLFRV 352
>gi|298527663|ref|ZP_07015067.1| amino acid-binding ACT domain protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511315|gb|EFI35217.1| amino acid-binding ACT domain protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 143
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
D G + + +L E GIN+ + + QS ++A+ D +E L
Sbjct: 77 EDRPGGLHAILTMLSENGINVEYMYAFVQQSGQNAVLIFRFDR--TEEAVETLQK 129
Score = 34.6 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
+ G + V L E GINI L + + + D L++
Sbjct: 11 ENRAGRLADVTRTLAEAGINIRALSLADTTDFGI-LRLIVTDHEKAKQALKE 61
>gi|225351323|ref|ZP_03742346.1| hypothetical protein BIFPSEUDO_02916 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157667|gb|EEG70950.1| hypothetical protein BIFPSEUDO_02916 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 773
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LN++L + +
Sbjct: 694 DRPHLLSDVTRVLSDHGVNIISGSISTGTDRVATSQFSFEMADPQHLNTLLAAVRKIEGV 753
Query: 90 RFV 92
V
Sbjct: 754 FDV 756
>gi|197105343|ref|YP_002130720.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Phenylobacterium zucineum HLK1]
gi|196478763|gb|ACG78291.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Phenylobacterium zucineum HLK1]
Length = 722
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS-----V 79
+ + G++ V +I+GE G NI + + Q + ID + ++ +
Sbjct: 648 RVTATIRNAPGVLGQVCSIIGEAGGNIMNLRMHHRQQD---FFEVDIDVDVQDAKHLTHI 704
Query: 80 LEKLSVNVTIRFV 92
L N ++ V
Sbjct: 705 AAALRANPSVETV 717
>gi|188996178|ref|YP_001930429.1| acetolactate synthase, small subunit [Sulfurihydrogenibium sp.
YO3AOP1]
gi|237755945|ref|ZP_04584534.1| acetolactate synthase, small subunit [Sulfurihydrogenibium
yellowstonense SS-5]
gi|188931245|gb|ACD65875.1| acetolactate synthase, small subunit [Sulfurihydrogenibium sp.
YO3AOP1]
gi|237691894|gb|EEP60913.1| acetolactate synthase, small subunit [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 187
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I + G++ + + G NI +GR+ + A + + D ++ +++
Sbjct: 20 HIITVKVQHNFGVLARITGLFAGRGYNIESLTVGRTHEPDIARITIVVEGDERVIEQIIK 79
Query: 82 KLSVNVTIRFVKQFE 96
+L + VK
Sbjct: 80 QLRRLIETLKVKDIT 94
>gi|83951465|ref|ZP_00960197.1| homoserine dehydrogenase [Roseovarius nubinhibens ISM]
gi|83836471|gb|EAP75768.1| homoserine dehydrogenase [Roseovarius nubinhibens ISM]
Length = 428
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSIL 76
V + I D G + V LGE G++I R + + + L
Sbjct: 344 VTPAPYYLRISLDDKPGALAKVAKALGEAGVSIDRMRQVRHDEATAPVLIVTHKTTRAAL 403
Query: 77 NSVLEKLSVNVTI 89
L ++ I
Sbjct: 404 EEALAHMAGLDVI 416
>gi|297565407|ref|YP_003684379.1| putative signal transduction protein with CBS domains [Meiothermus
silvanus DSM 9946]
gi|296849856|gb|ADH62871.1| putative signal transduction protein with CBS domains [Meiothermus
silvanus DSM 9946]
Length = 208
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D G + + LG GINI + + L + + + V E L
Sbjct: 143 DRPGELGRLTQFLGREGINIHSLLTYPDDP-KTVRTVLRVGTPMTHQVAEMLR-IEGF 198
>gi|282857439|ref|ZP_06266672.1| GTP diphosphokinase [Pyramidobacter piscolens W5455]
gi|282584724|gb|EFB90059.1| GTP diphosphokinase [Pyramidobacter piscolens W5455]
Length = 816
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI----AHFHLGRSQSTEHAISFLCIDGSILNSVL 80
I I D G+ + + G GINI A + + I+ ++ ++
Sbjct: 744 RIVIDALDRPGLFGDIAQVCGNGGINITSVMASQMGSGNSRMKMDIAVQDLEQLYS--II 801
Query: 81 EKLSVNVTIRFV 92
+++ + V
Sbjct: 802 ARVNGIRDVINV 813
>gi|322421894|ref|YP_004201117.1| amino acid-binding ACT domain-containing protein [Geobacter sp.
M18]
gi|320128281|gb|ADW15841.1| amino acid-binding ACT domain protein [Geobacter sp. M18]
Length = 188
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-- 77
+ +I + +D GIV + L + GI+I + + E + L ++ ++
Sbjct: 99 EGELCLISVYGSDKPGIVYRITRELADRGISITDLNTKLIGTREEPVYVLVLEAALPQGL 158
Query: 78 ------SVLEKLSVNVTI-RFVKQFE 96
++LEKL +++ V+
Sbjct: 159 TVEDASALLEKLKKELSVEISVRLIT 184
>gi|297565948|ref|YP_003684920.1| formyltetrahydrofolate deformylase [Meiothermus silvanus DSM
9946]
gi|296850397|gb|ADH63412.1| formyltetrahydrofolate deformylase [Meiothermus silvanus DSM
9946]
Length = 287
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 18/62 (29%), Gaps = 4/62 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS---ILNSVL 80
+ I D GIV V L +G NI L + VL
Sbjct: 8 RLLITCPDRPGIVAAVSTFLFNHGANITDLQQHSTDPEGGTFFMRLEFQTPHLDVSRGVL 67
Query: 81 EK 82
E+
Sbjct: 68 ER 69
>gi|642664|gb|AAA93099.1| acetolactate synthase small subunit [Streptomyces avermitilis]
Length = 176
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILN 77
+ + + ++ + G++ + + G NI +G ++ + + + + + L
Sbjct: 1 MSKHTLSVLVENKPGVLARITALFSRRGFNIDSLAVGVTEHPDISRITIVVNVIEALPLE 60
Query: 78 SVLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 QVTKQLNKLVNVLKIVELE 79
>gi|284105197|ref|ZP_06386190.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase [Candidatus
Poribacteria sp. WGA-A3]
gi|283830148|gb|EFC34409.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase [Candidatus
Poribacteria sp. WGA-A3]
Length = 728
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCIDGSIL-NSVLEKLSVNVTI 89
+ G++ V + + NI+ + + + + F + I + LE + +
Sbjct: 657 NRPGVLANVSSAISASKTNISQAEITTGEDQKAVLDFRIEISHTRDLERALEAIGRVDGV 716
Query: 90 RFVKQFE 96
K+
Sbjct: 717 ISAKRVR 723
>gi|297191889|ref|ZP_06909287.1| acetolactate synthase I small subunit [Streptomyces
pristinaespiralis ATCC 25486]
gi|197721135|gb|EDY65043.1| acetolactate synthase I small subunit [Streptomyces
pristinaespiralis ATCC 25486]
Length = 174
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNS 78
+ + + ++ + GI+ + + G NI +G ++ + + + ++ L
Sbjct: 1 MSKHTLSVLVENTPGILARIAALFSRRGFNIDSLAVGVTEHPDISRITIVVNVEDLPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 VTKQLNKLVNVLKIVELE 78
>gi|19075337|ref|NP_587837.1| D-3 phosphoglycerate dehydrogenase (predicted) [Schizosaccharomyces
pombe 972h-]
gi|3122869|sp|P87228|SERA_SCHPO RecName: Full=Putative D-3-phosphoglycerate dehydrogenase;
Short=3-PGDH
gi|2213544|emb|CAB09778.1| D-3 phosphoglycerate dehydrogenase (predicted) [Schizosaccharomyces
pombe]
Length = 466
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 29/99 (29%), Gaps = 11/99 (11%)
Query: 4 DGKPRFIKIQEINF----DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRS 59
+ E++ + D + V+ ++ G++ V + ++ NI
Sbjct: 371 GNSIGAVNFPEVSLRSLTEADRNAARVLFVHRNVPGVLRQVNELFIDH--NIKSQFS--D 426
Query: 60 QSTEHAISFLCIDGSIL---NSVLEKLSVNVTIRFVKQF 95
+ A I ++ +KL +
Sbjct: 427 SRGDIAYLVADISDCTPGSLEALHQKLESLPCKINTRLL 465
>gi|326203920|ref|ZP_08193782.1| acetolactate synthase, small subunit [Clostridium papyrosolvens
DSM 2782]
gi|325986018|gb|EGD46852.1| acetolactate synthase, small subunit [Clostridium papyrosolvens
DSM 2782]
Length = 170
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNS 78
+ + + ++ + G++ V + G NI +G +++ E + + +DG +
Sbjct: 1 MAKHTLSVLVENRSGVLSRVAGLFSRRGFNIDSLAVGVTENPEVSRMTIVVDGDEYTVEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ + I ++ E
Sbjct: 61 VSKQLNKLIDIIKIRALE 78
>gi|88706913|ref|ZP_01104612.1| Homoserine dehydrogenase [Congregibacter litoralis KT71]
gi|88698835|gb|EAQ95955.1| Homoserine dehydrogenase [Congregibacter litoralis KT71]
Length = 429
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 25/87 (28%), Gaps = 4/87 (4%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
+ + + D G++ + + LG GI+I ++ + + + +
Sbjct: 340 PMEAVSSAWYLRLQAEDRPGVMSQLASCLGAEGISIEALIQKPPKAAAATVPVVVLTNTA 399
Query: 76 LNSVL----EKLSVNVTIRFVKQFEFN 98
L +S I
Sbjct: 400 REDALRRAVAAISALPGITEPHCIRIE 426
>gi|303257516|ref|ZP_07343528.1| GTP diphosphokinase [Burkholderiales bacterium 1_1_47]
gi|331000219|ref|ZP_08323903.1| RelA/SpoT family protein [Parasutterella excrementihominis YIT
11859]
gi|302859486|gb|EFL82565.1| GTP diphosphokinase [Burkholderiales bacterium 1_1_47]
gi|329572385|gb|EGG54038.1| RelA/SpoT family protein [Parasutterella excrementihominis YIT
11859]
Length = 703
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-NSVLEKLS 84
I ++ AD +G++ + IL +I+ R + H + I G N L +
Sbjct: 633 ILVIAADRMGLLKDISEILSREKQSISAMQTVRVKGDVHMTFTIEIHGKDDLNRTLAAIR 692
Query: 85 VNVTIRFVK 93
+ +
Sbjct: 693 EVKGVFSAR 701
>gi|190151180|ref|YP_001969705.1| Guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase
(ppGpp)ase) [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|189916311|gb|ACE62563.1| Guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase
(ppGpp)ase) [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
Length = 502
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 9/82 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLC 70
++ D+++ D G++ + N + NI + + + +
Sbjct: 425 DHLDVDIELE-------IKDQPGVLASLTNAIASMNSNIGTVESRPNGTGNYQVKMRIAV 477
Query: 71 IDGSILNSVLEKLSVNVTIRFV 92
D + L V++KL+ + V
Sbjct: 478 TDNAHLYVVIQKLTKVNGVVRV 499
>gi|148656099|ref|YP_001276304.1| acetolactate synthase small subunit [Roseiflexus sp. RS-1]
gi|148568209|gb|ABQ90354.1| acetolactate synthase, small subunit [Roseiflexus sp. RS-1]
Length = 180
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 30/69 (43%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D G++ V ++ G NI +G S++ + + ++ + V+++L
Sbjct: 4 HTIVALVQDRPGVLSRVVGLIRRRGYNIESLAVGHSETPGVSRMTIVVEWEDVEQVVKQL 63
Query: 84 SVNVTIRFV 92
+ + V
Sbjct: 64 YRLIEVLKV 72
>gi|328885236|emb|CCA58475.1| acetolactate synthase small subunit [Streptomyces venezuelae ATCC
10712]
Length = 175
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ + GI+ + + G NI +G ++ + + + ++ L V +
Sbjct: 5 HTLSVLVENTPGILARIAALFSRRGFNIDSLAVGVTEHPDISRITIVVNVEDLPLEQVTK 64
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + + + E
Sbjct: 65 QLNKLVNVLKIVELE 79
>gi|297614536|gb|ADI48567.1| putative (p)ppGpp synthetase II [uncultured bacterium fss6]
Length = 673
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS---FLCIDGSILNSVLEK 82
+ I D G++ + ++L +N+A +T A+ + D + +L +
Sbjct: 599 LRIDADDRQGLLHDITSVLANEKVNVAQLDSRLDTATRQALVTVGIIVADADDVQRLLSR 658
Query: 83 LSVNVTIRFV 92
+S I V
Sbjct: 659 ISQLKGIHNV 668
>gi|296171274|ref|ZP_06852678.1| acetolactate synthase small subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295894242|gb|EFG73999.1| acetolactate synthase small subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 165
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ V + G NI +G ++ + + + + + + L + +
Sbjct: 4 HTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATEQKDMSRMTIVVSAEETPLEQITK 63
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 64 QLNKLINVIKI 74
>gi|283850629|ref|ZP_06367916.1| acetolactate synthase, small subunit [Desulfovibrio sp. FW1012B]
gi|283573872|gb|EFC21845.1| acetolactate synthase, small subunit [Desulfovibrio sp. FW1012B]
Length = 160
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ I+ D G++ V + G NI ++ + + ++ + D +I+ +++
Sbjct: 3 HILSILVEDEPGVLSRVAGLFSGRGYNIETLNVAPTLTEGLSMMTITTEGDEAIIEQIVK 62
Query: 82 KLSVNVTIRFV 92
+L VT V
Sbjct: 63 QLRKLVTTLKV 73
>gi|215400774|ref|YP_002327535.1| acetolactate synthase small subunit [Vaucheria litorea]
gi|194441224|gb|ACF70952.1| acetolactate synthase small subunit [Vaucheria litorea]
Length = 208
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + +L G NI +G S+ A L + + + +++
Sbjct: 36 HTLSVLAEDEPGVLTRIAGLLARRGCNIESLAIGPSEMKGIARITLVLPGTSASVTQIIK 95
Query: 82 KLSVNVTIRFVKQFEF 97
+L + + + F
Sbjct: 96 QLYKIINVLKIDDVTF 111
>gi|78222838|ref|YP_384585.1| homoserine dehydrogenase [Geobacter metallireducens GS-15]
gi|78194093|gb|ABB31860.1| homoserine dehydrogenase [Geobacter metallireducens GS-15]
Length = 436
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 22/66 (33%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ I D G++ + ILG+Y I+I + E + + + V
Sbjct: 352 SKYYIRFSAVDRPGVLARISGILGKYDISIESMVQSGRMAGEEVPIVIMTHEARESDVRT 411
Query: 82 KLSVNV 87
L
Sbjct: 412 ALDEID 417
>gi|127513565|ref|YP_001094762.1| PII uridylyl-transferase [Shewanella loihica PV-4]
gi|126638860|gb|ABO24503.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella loihica PV-4]
Length = 857
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 8/79 (10%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCIDGSILNSV 79
G + + + D + V +L IN+ + S+ + L DGS
Sbjct: 672 GGTELFVYSQDKPKLFATVMAVLDNKNINVHDASIMTSKDGYALDSFVILEQDGSP---- 727
Query: 80 LEKLSVNVTIRF--VKQFE 96
+ ++S I+ VK
Sbjct: 728 VSQISRIQGIKKALVKALS 746
>gi|302537102|ref|ZP_07289444.1| acetolactate synthase, small subunit [Streptomyces sp. C]
gi|302445997|gb|EFL17813.1| acetolactate synthase, small subunit [Streptomyces sp. C]
Length = 174
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNS 78
+ + + ++ + GI+ + + G NI +G ++ + + + ++ L
Sbjct: 1 MSKHTLSVLVENTPGILARIAALFSRRGFNIDSLAVGVTEHPDISRITIVVNVEDLPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 VTKQLNKLVNVLKIVELE 78
>gi|218295657|ref|ZP_03496453.1| amino acid-binding ACT domain protein [Thermus aquaticus Y51MC23]
gi|218243816|gb|EED10343.1| amino acid-binding ACT domain protein [Thermus aquaticus Y51MC23]
Length = 230
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL 56
+ + D G + + LGE G+NI +
Sbjct: 160 PEMHDLSVQVPDRPGEIARIATALGEAGVNIKDIEV 195
>gi|254438483|ref|ZP_05051977.1| acetolactate synthase, small subunit [Octadecabacter antarcticus
307]
gi|198253929|gb|EDY78243.1| acetolactate synthase, small subunit [Octadecabacter antarcticus
307]
Length = 187
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 25/75 (33%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + ++ + G++ V + G NI + T H + ++ +
Sbjct: 27 ERHTLAVIVENEPGVLARVIGLFAGRGYNIESLTVAEIDHTGHLSRITVVTTGTPQTINQ 86
Query: 82 KLSVNVTIRFVKQFE 96
+ I V++
Sbjct: 87 ITAQLGRIVSVREVH 101
>gi|6136306|gb|AAF04327.1| RelA/SpoT homolog [Bradyrhizobium japonicum]
Length = 779
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 7/38 (18%), Positives = 16/38 (42%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
I + N + G + + ++ E+ NI + + R
Sbjct: 705 RIRVENVNEPGALAQIATVIAEHDGNIDNISMQRRSPD 742
>gi|84502744|ref|ZP_01000863.1| homoserine dehydrogenase [Oceanicola batsensis HTCC2597]
gi|84389139|gb|EAQ01937.1| homoserine dehydrogenase [Oceanicola batsensis HTCC2597]
Length = 428
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 1/75 (1%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
V + + D G + + +LGE GI+I EHA + + ++
Sbjct: 344 VTPAAYYLRMTLQDKPGALAKIAAVLGEAGISINRMRQY-DHEGEHAPVLIVTHRTGRDA 402
Query: 79 VLEKLSVNVTIRFVK 93
+ LS VK
Sbjct: 403 LDRALSAMERTGVVK 417
>gi|317471454|ref|ZP_07930806.1| RelA/SpoT family protein [Anaerostipes sp. 3_2_56FAA]
gi|316901069|gb|EFV23031.1| RelA/SpoT family protein [Anaerostipes sp. 3_2_56FAA]
Length = 904
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCIDGSIL-NSVLEKL 83
I I + G++ V + E I+I ++ S+ +S I+G N V+ ++
Sbjct: 831 ISIYANNRKGMLADVSKVFLELDIDILTMNVSNSKKGRATLSMSFDINGVAQLNQVIARI 890
Query: 84 SVNVTIRFV 92
+ +
Sbjct: 891 RNIEGVVDI 899
>gi|307326523|ref|ZP_07605718.1| acetolactate synthase, small subunit [Streptomyces violaceusniger
Tu 4113]
gi|306887931|gb|EFN18922.1| acetolactate synthase, small subunit [Streptomyces violaceusniger
Tu 4113]
Length = 174
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNS 78
+ + + ++ + GI+ + + G NI +G ++ + + + ++ L
Sbjct: 1 MSKHTLSVLVENTPGILARIAALFSRRGFNIDSLAVGVTEHPDISRITIVVNVEELPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 VTKQLNKLVNVLKIVELE 78
>gi|307264529|ref|ZP_07546113.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
gi|306870128|gb|EFN01888.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
Length = 568
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 9/82 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLC 70
++ D+++ D G++ + N + NI + + + +
Sbjct: 491 DHLDVDIELE-------IKDQPGVLASLTNAIASMNSNIGTVESRPNGTGNYQVKMRIAV 543
Query: 71 IDGSILNSVLEKLSVNVTIRFV 92
D + L V++KL+ + V
Sbjct: 544 TDNAHLYVVIQKLTKVNGVVRV 565
>gi|294140305|ref|YP_003556283.1| transcriptional regulatory protein TyrR [Shewanella violacea
DSS12]
gi|293326774|dbj|BAJ01505.1| transcriptional regulatory protein TyrR [Shewanella violacea
DSS12]
Length = 512
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D +G+ + IL YGIN+ + F ++ +L+ +L + +
Sbjct: 8 MDRVGLAKDILMILEGYGINLIAIDASNQ--GFLYLQFAEVNFDVLSELLPLIRKVEGVH 65
Query: 91 FVKQFEF 97
V+ F
Sbjct: 66 DVRTVSF 72
>gi|165977262|ref|YP_001652855.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|307251430|ref|ZP_07533344.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|307257924|ref|ZP_07539678.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
gi|165877363|gb|ABY70411.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|306856514|gb|EFM88656.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|306863571|gb|EFM95500.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
Length = 568
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 9/82 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLC 70
++ D+++ D G++ + N + NI + + + +
Sbjct: 491 DHLDVDIELE-------IKDQPGVLASLTNAIASMNSNIGTVESRPNGTGNYQVKMRIAV 543
Query: 71 IDGSILNSVLEKLSVNVTIRFV 92
D + L V++KL+ + V
Sbjct: 544 TDNAHLYVVIQKLTKVNGVVRV 565
>gi|114320973|ref|YP_742656.1| homoserine dehydrogenase [Alkalilimnicola ehrlichii MLHE-1]
gi|114227367|gb|ABI57166.1| homoserine dehydrogenase [Alkalilimnicola ehrlichii MLHE-1]
Length = 437
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 30/85 (35%), Gaps = 8/85 (9%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN---- 77
I ++ D G++ V ILGE GI+I + + + +
Sbjct: 352 SAYYIRLMAQDEPGVLAEVTRILGELGISIEAIMQKEPAPGAEDVPVIFLTHRVKEHRMN 411
Query: 78 SVLEKLSVNVTI----RFVKQFEFN 98
+ +E++ + ++ F+
Sbjct: 412 AAIEQIEALPAVNGRLTRIRVERFD 436
>gi|46143480|ref|ZP_00135156.2| COG0317: Guanosine polyphosphate pyrophosphohydrolases/synthetases
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126209287|ref|YP_001054512.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
(ppGpp)ase) [Actinobacillus pleuropneumoniae L20]
gi|303251149|ref|ZP_07337333.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307253509|ref|ZP_07535379.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|126098079|gb|ABN74907.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
(ppGpp)ase) [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
gi|302650000|gb|EFL80172.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306859010|gb|EFM91053.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
Length = 568
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 9/82 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLC 70
++ D+++ D G++ + N + NI + + + +
Sbjct: 491 DHLDVDIELE-------IKDQPGVLASLTNAIASMNSNIGTVESRPNGTGNYQVKMRIAV 543
Query: 71 IDGSILNSVLEKLSVNVTIRFV 92
D + L V++KL+ + V
Sbjct: 544 TDNAHLYVVIQKLTKVNGVVRV 565
>gi|124486055|ref|YP_001030671.1| hypothetical protein Mlab_1235 [Methanocorpusculum labreanum Z]
gi|124363596|gb|ABN07404.1| amino acid-binding ACT domain protein [Methanocorpusculum
labreanum Z]
Length = 222
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFH---LGRSQSTEHAISFLCID-GSILN 77
+ ++ + GI+ +G++ E+ NI L R A + + I+ G +
Sbjct: 3 SHHALSLIADNQKGILRDIGSVCAEHNANITAIQQEILTRGPDKGCAWADIEIEGGDDTD 62
Query: 78 SVLEKLSVNVTIRFV 92
S+L +L + +R V
Sbjct: 63 SILSELRLVTGVREV 77
>gi|182411982|ref|YP_001817048.1| amino acid-binding ACT domain-containing protein [Opitutus terrae
PB90-1]
gi|177839196|gb|ACB73448.1| amino acid-binding ACT domain protein [Opitutus terrae PB90-1]
Length = 130
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKLSVNVTI 89
+ G + V + G N+ + L + D L V +L+ +
Sbjct: 51 RNHPGTMSHVTGLFARRGFNLDAILCVPVGDGATSRMLLLVSDEPRLEQVERQLAKLYDV 110
Query: 90 RFVK 93
V+
Sbjct: 111 LEVR 114
>gi|330925973|ref|XP_003301273.1| hypothetical protein PTT_12731 [Pyrenophora teres f. teres 0-1]
gi|311324140|gb|EFQ90629.1| hypothetical protein PTT_12731 [Pyrenophora teres f. teres 0-1]
Length = 324
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
++ + + G++ V IL G NI + ++ + + + + ++
Sbjct: 75 APPKSHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVDDLSRMTIVLRGQDGVI 134
Query: 77 NSVLEKLSVN 86
+L
Sbjct: 135 EQARRQLEDL 144
>gi|254469589|ref|ZP_05082994.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase protein
[Pseudovibrio sp. JE062]
gi|211961424|gb|EEA96619.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase protein
[Pseudovibrio sp. JE062]
Length = 735
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 35/93 (37%), Gaps = 13/93 (13%)
Query: 14 EINFDVDIGRL-----MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
++ +D+D I + + G + + ++G++ NI + + R S
Sbjct: 645 DVRWDIDPNAPERFPAQISVFAVNEPGSLAAITKVIGDHRGNIDNIKMIRKASD---FHE 701
Query: 69 LCIDGSILN-----SVLEKLSVNVTIRFVKQFE 96
+ ID + + +L +L + ++
Sbjct: 702 MLIDLEVWDLKHLNLILNQLRAKPNVSEAQRVN 734
>gi|238063228|ref|ZP_04607937.1| acetolactate synthase, small subunit [Micromonospora sp. ATCC
39149]
gi|237885039|gb|EEP73867.1| acetolactate synthase, small subunit [Micromonospora sp. ATCC
39149]
Length = 171
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +G +++ + + + + + S L V +
Sbjct: 4 HTLSVLVENKPGVLARVSGLFSRRGFNIDSLAVGETENPDVSRITIVVNAESSPLEQVTK 63
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 64 QLNKLVNVLKI 74
>gi|222528520|ref|YP_002572402.1| acetolactate synthase small subunit [Caldicellulosiruptor bescii
DSM 6725]
gi|222455367|gb|ACM59629.1| acetolactate synthase, small subunit [Caldicellulosiruptor bescii
DSM 6725]
Length = 170
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +G ++ + + + D I+ V +
Sbjct: 3 YTLSVLVENHPGVLSRVAGLFSRRGFNIDSLAVGVTEDPTISRMTIVVNGDDYIVEQVTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + VK+
Sbjct: 63 QLNKLIDVIKVKKLN 77
>gi|212703455|ref|ZP_03311583.1| hypothetical protein DESPIG_01499 [Desulfovibrio piger ATCC
29098]
gi|212673115|gb|EEB33598.1| hypothetical protein DESPIG_01499 [Desulfovibrio piger ATCC
29098]
Length = 162
Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNS 78
+ R ++ ++ + G++ V + G NI ++ + + + D IL
Sbjct: 1 MQRHVLSVLVENEPGVLSRVAGLFSGRGFNIDSLNVAPTLEEGVSHMTITTYGDSQILEQ 60
Query: 79 VLEKLSVNVTIRFV 92
++++L VT+ V
Sbjct: 61 IMKQLHKIVTVIKV 74
>gi|145593785|ref|YP_001158082.1| acetolactate synthase 3 regulatory subunit [Salinispora tropica
CNB-440]
gi|145303122|gb|ABP53704.1| acetolactate synthase, small subunit [Salinispora tropica
CNB-440]
Length = 169
Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +G +++ + + + + + S L V +
Sbjct: 2 HTLSVLVENKPGVLARVSGLFSRRGFNIGSLAVGETENPDVSRITIVVNAESSPLEQVTK 61
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 62 QLNKLVNVIKI 72
>gi|239906820|ref|YP_002953561.1| acetolactate synthase small subunit [Desulfovibrio magneticus
RS-1]
gi|239796686|dbj|BAH75675.1| acetolactate synthase small subunit [Desulfovibrio magneticus
RS-1]
Length = 160
Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ I+ + G++ V + G NI ++ + + ++ + D +I+ +++
Sbjct: 3 HILSILVENEPGVLARVAGLFSGRGYNIETLNVAPTLTEGLSMMTITTTGDEAIIEQIVK 62
Query: 82 KLSVNVTIRFV 92
+L VT V
Sbjct: 63 QLRKLVTTLKV 73
>gi|291286355|ref|YP_003503171.1| acetolactate synthase, small subunit [Denitrovibrio acetiphilus
DSM 12809]
gi|290883515|gb|ADD67215.1| acetolactate synthase, small subunit [Denitrovibrio acetiphilus
DSM 12809]
Length = 165
Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ + G++ + + G NI + ++ + + D ++ +++
Sbjct: 3 HTISVLVENKFGVLSRISGLFSGRGYNIESLSVNKTMDVNISTMTIVTTGDADVIEQIIK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L V + V+
Sbjct: 63 QLRKLVNVLRVRDVS 77
>gi|218441725|ref|YP_002380054.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7424]
gi|218174453|gb|ACK73186.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7424]
Length = 749
Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEK 82
I I D +G++ + L + IN+ + + + A+ L I D L +++
Sbjct: 672 IVIETIDRVGVLRDILTRLSDENINVRNAQVKT-SLGKPALIALSIDIRDHEQLEYAIKR 730
Query: 83 LSVNVTIRFVKQF 95
+ I +++
Sbjct: 731 IKNLSDILEIRRV 743
>gi|16331478|ref|NP_442206.1| acetolactate synthase 3 regulatory subunit [Synechocystis sp. PCC
6803]
gi|1001135|dbj|BAA10276.1| acetolactate synthase [Synechocystis sp. PCC 6803]
Length = 188
Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
+ + + ++ D G++ + + G NI +G ++ + + + + D + +
Sbjct: 14 LPPMKHTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGSAEQGDVSRITMVVPGDENTI 73
Query: 77 NSVLEKLSVNVTIRFVKQFE 96
+ ++L V + V+
Sbjct: 74 EQLTKQLYKLVNVIKVQDIT 93
>gi|219852971|ref|YP_002467403.1| acetolactate synthase, small subunit [Methanosphaerula palustris
E1-9c]
gi|219547230|gb|ACL17680.1| acetolactate synthase, small subunit [Methanosphaerula palustris
E1-9c]
Length = 161
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +G + + + + + D ++ V +
Sbjct: 4 HTLSVLVENRAGVLSRVSGLFSRRGFNIESLAVGTCEESGMSRITIVVIGDDPMVEQVKK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L + + +
Sbjct: 64 QLHKLIDVIRISDLT 78
>gi|302059737|ref|ZP_07251278.1| GTP pyrophosphokinase [Pseudomonas syringae pv. tomato K40]
Length = 661
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 562 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 621
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 622 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 656
>gi|260753344|ref|YP_003226237.1| (p)ppGpp synthetase I, SpoT/RelA [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552707|gb|ACV75653.1| (p)ppGpp synthetase I, SpoT/RelA [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 705
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 24/79 (30%), Gaps = 8/79 (10%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN- 77
+ + + ++ + G + V I G + NI + L + + + +
Sbjct: 620 AEGATVRLKVIVKNQAGALGVVATIFGAHKANIINLVLA---DRDENFHVFNVTLEVRDL 676
Query: 78 ----SVLEKLSVNVTIRFV 92
+L L +
Sbjct: 677 QHLMRILAALRAADGVVQA 695
>gi|126178698|ref|YP_001046663.1| amino acid-binding ACT domain-containing protein [Methanoculleus
marisnigri JR1]
gi|125861492|gb|ABN56681.1| amino acid-binding ACT domain protein [Methanoculleus marisnigri
JR1]
Length = 143
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
Query: 14 EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG 73
+I + D G + + +ILG+ GINI + + + AI L +D
Sbjct: 67 GFRVSFT---DVIGVKMRDEPGGLSDIASILGDAGINIEYAYAY--SGKDAAILILRVDQ 121
Query: 74 SILNSVLEKL 83
+ ++
Sbjct: 122 V--EDAVRQI 129
>gi|312221081|emb|CBY01022.1| similar to D-3-phosphoglycerate dehydrogenase [Leptosphaeria
maculans]
Length = 486
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 9/78 (11%), Positives = 23/78 (29%), Gaps = 7/78 (8%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + ++ ++ G++ V IL + NI + A I +
Sbjct: 412 PDCMRVIFIHKNVPGVLRQVNGILLHH--NIEKQMS--DSRGDVAYLMADISEVKEGEIK 467
Query: 81 E---KLSVNVTIRFVKQF 95
+ L + +
Sbjct: 468 DLFTSLQELSSCIRTRVL 485
>gi|284047810|ref|YP_003398149.1| Chorismate mutase, type II [Acidaminococcus fermentans DSM 20731]
gi|283952031|gb|ADB46834.1| Chorismate mutase, type II [Acidaminococcus fermentans DSM 20731]
Length = 188
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 16 NFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGR-SQSTEHAISFLCID 72
N ++ G + + D + + N++G+YG N+ + L ++ + L I
Sbjct: 101 NIEIRPGGTRVVVRLTRPDQPNAMSSILNMVGDYGYNMQYMELLHFNKPEKTVTFDLTIL 160
Query: 73 GSILNSVLEKL 83
G + + ++KL
Sbjct: 161 GDLSETNMQKL 171
>gi|225434187|ref|XP_002279286.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|296084341|emb|CBI24729.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 26/69 (37%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D G++ + + G NI +G ++ + +L V+E+L
Sbjct: 78 HTISVFVGDESGMINRIAGVFARRGYNIDSLAVGLNKDKALFTIVVSGTERVLQQVVEQL 137
Query: 84 SVNVTIRFV 92
V + V
Sbjct: 138 HKLVNVLKV 146
Score = 37.7 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE---HAISFLCIDGSILNSVL 80
+ +V + G++ V + G NI +G ++ D SI ++
Sbjct: 311 HTLSMVVNNAPGVLNLVTGVFARRGYNIQSLAVGHAEVEGLSRITTVVPGTDESINK-LV 369
Query: 81 EKLSVNVTIRFVKQFE 96
++L + + V+
Sbjct: 370 QQLKKLIDLHDVRDIT 385
>gi|297626277|ref|YP_003688040.1| transcriptional regulator [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922042|emb|CBL56606.1| transcriptional regulator [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 216
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 6/75 (8%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
F+ I + + + D G + + ++ ++G+NI HL + +
Sbjct: 130 FVDIMGMRMR----GTRLVLEATDAPGQLSRITGLVADHGMNIT--HLAVYPGSGTSQIV 183
Query: 69 LCIDGSILNSVLEKL 83
L ++ + +L
Sbjct: 184 LGVNSLNTADLETQL 198
>gi|251795335|ref|YP_003010066.1| acetolactate synthase small subunit [Paenibacillus sp. JDR-2]
gi|247542961|gb|ACS99979.1| acetolactate synthase, small subunit [Paenibacillus sp. JDR-2]
Length = 161
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ D G++ V + G G NI +G S+ + + D L + +
Sbjct: 4 HTIAVIVNDQPGVLQRVSGLFGRRGFNIESITVGASEEQGLSRMVIVTTGDDHTLEQITK 63
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 64 QLYKLIDVIKV 74
>gi|83644613|ref|YP_433048.1| homoserine dehydrogenase [Hahella chejuensis KCTC 2396]
gi|83632656|gb|ABC28623.1| Homoserine dehydrogenase [Hahella chejuensis KCTC 2396]
Length = 431
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 8/91 (8%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
+ + + + I+ D G++ V IL E+ INI S+ + I + +
Sbjct: 340 VPVEDVVSAYYLRILVQDHPGVLANVAQILSEHSINIESIVQKESEQHDGLIPMIMLTHR 399
Query: 75 ILNS----VLEKLSVNVTIR----FVKQFEF 97
+ L + + ++ F
Sbjct: 400 VHEKNMNHALAVIEALPDVVGKVTRIRVESF 430
>gi|304311875|ref|YP_003811473.1| Homoserine dehydrogenase [gamma proteobacterium HdN1]
gi|301797608|emb|CBL45829.1| Homoserine dehydrogenase [gamma proteobacterium HdN1]
Length = 454
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS-VLEKLS 84
+ I+ D G++ + L INI + + + I + V + +S
Sbjct: 373 LRILAKDSPGVLNKITAALSRADINIEAITQREIDEVNGQVPIIMVTRKIKEAQVRQAIS 432
Query: 85 VNVTIRFV--KQFEFNVD 100
++ V + ++
Sbjct: 433 EIEAVQDVVDRVICIRLE 450
>gi|261190817|ref|XP_002621817.1| D-3-phosphoglycerate dehydrogenase 2 [Ajellomyces dermatitidis
SLH14081]
gi|239590861|gb|EEQ73442.1| D-3-phosphoglycerate dehydrogenase 2 [Ajellomyces dermatitidis
SLH14081]
gi|327357490|gb|EGE86347.1| D-3-phosphoglycerate dehydrogenase 2 [Ajellomyces dermatitidis ATCC
18188]
Length = 470
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 31/89 (34%), Gaps = 8/89 (8%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+K++ + D + + ++ +I G++ V IL ++ ++ + A
Sbjct: 386 VKLRSLTMD-EPDHGRVIFIHQNIPGVLREVNEILSDHNVD----KQMTDSRGDVAYLMA 440
Query: 70 CIDGSIL---NSVLEKLSVNVTIRFVKQF 95
I + ++L + +
Sbjct: 441 DISDVHTSDIKELYKRLEGLPSRIMTRIL 469
>gi|28868900|ref|NP_791519.1| GTP pyrophosphokinase [Pseudomonas syringae pv. tomato str. DC3000]
gi|28852139|gb|AAO55214.1| GTP pyrophosphokinase [Pseudomonas syringae pv. tomato str. DC3000]
Length = 744
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 645 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 704
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 705 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 739
>gi|242279863|ref|YP_002991992.1| acetolactate synthase 3 regulatory subunit [Desulfovibrio
salexigens DSM 2638]
gi|242122757|gb|ACS80453.1| acetolactate synthase, small subunit [Desulfovibrio salexigens
DSM 2638]
Length = 160
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ + + G++ V + G NI ++ + + + D I+ +++
Sbjct: 3 HTLSVTVENEPGVLSRVAGLFSGRGFNIESLNVAPTLEEGVSHMTITTIGDEHIVEQIVK 62
Query: 82 KLSVNVTIRFV 92
+L VT+ V
Sbjct: 63 QLRKLVTVIKV 73
>gi|222481029|ref|YP_002567266.1| amino acid-binding ACT domain protein [Halorubrum lacusprofundi
ATCC 49239]
gi|222453931|gb|ACM58196.1| amino acid-binding ACT domain protein [Halorubrum lacusprofundi
ATCC 49239]
Length = 166
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 35 GIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
GIV V IL ++GI+I + T+ ++ D + +L ++ +R V
Sbjct: 107 GIVAEVTGILADHGISIRQVLSEDPEFTDDPKLYVITDTDLSGDLLVEIRDLEYVRRV 164
>gi|90021883|ref|YP_527710.1| GTP diphosphokinase [Saccharophagus degradans 2-40]
gi|89951483|gb|ABD81498.1| RelA/SpoT family protein [Saccharophagus degradans 2-40]
Length = 746
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 7/91 (7%)
Query: 8 RFIKIQEINFDVDIGRL--MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R I + + +I + D G++ + +L +N++ +
Sbjct: 655 RIIAVD--WAEAPKQLYSAVIALEAFDRHGLLRDITTLLDRERVNVSAMQTISDKDKNTV 712
Query: 66 ISFLCI---DGSILNSVLEKLSVNVTIRFVK 93
+ I D L+ V KLS + V+
Sbjct: 713 EMTITIEISDFGALSRVFAKLSQLPNVTEVR 743
>gi|302132005|ref|ZP_07257995.1| GTP pyrophosphokinase [Pseudomonas syringae pv. tomato NCPPB 1108]
Length = 747
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 648 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 707
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 708 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 742
>gi|171689016|ref|XP_001909448.1| hypothetical protein [Podospora anserina S mat+]
gi|170944470|emb|CAP70581.1| unnamed protein product [Podospora anserina S mat+]
Length = 320
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
R ++ + + G++ V IL G NI + ++ + + + + ++
Sbjct: 80 APPKRHVLNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVEDLSRMTIVLTGQDGVV 139
Query: 77 NSVLEKLSVN 86
+L
Sbjct: 140 EQARRQLEDL 149
>gi|146296171|ref|YP_001179942.1| acetolactate synthase, small subunit [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409747|gb|ABP66751.1| acetolactate synthase, small subunit [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 172
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +G ++ + + + D I+ V +
Sbjct: 5 YTLSVLVENHPGVLSRVAGLFSRRGFNIDSLAVGVTEDPTISRMTIVVNGDDYIVEQVTK 64
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + VK+
Sbjct: 65 QLNKLIDVIKVKKLN 79
>gi|291279356|ref|YP_003496191.1| hypothetical protein DEFDS_0963 [Deferribacter desulfuricans SSM1]
gi|290754058|dbj|BAI80435.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 143
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
D G + + IL + IN+ + + +S E AI D +E L+
Sbjct: 78 DKPGGLAQILKILRDNNINVEYMYAFVERSGEEAIMIFRFDE--TEKAIEALNN 129
>gi|294012916|ref|YP_003546376.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Sphingobium japonicum UT26S]
gi|292676246|dbj|BAI97764.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Sphingobium japonicum UT26S]
Length = 701
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 10/89 (11%)
Query: 13 QEINFDVD------IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
+ D+ G + ++ + G + V N+ G NI + L +
Sbjct: 611 DDDWVDLSWDSKSKGGTARLQVIVKNQPGALAAVTNVFGATKANILNLQLVNRE-GPFHT 669
Query: 67 SFLCI---DGSILNSVLEKLSVNVTIRFV 92
+ + D LN +L L T+
Sbjct: 670 DIIDLEVADAQHLNRILSALRGLDTVVQA 698
>gi|257092517|ref|YP_003166158.1| Homoserine dehydrogenase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257045041|gb|ACV34229.1| Homoserine dehydrogenase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 450
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE-KLSVNVTI 89
D G++ V IL + GI+I E + + ++ ++ +
Sbjct: 375 DDRPGVLADVTRILADDGISIVAMIQREPGEGEEQTDIIMLTHKTRERNIDTAIAGIEAL 434
Query: 90 RFVK 93
VK
Sbjct: 435 SAVK 438
>gi|86742320|ref|YP_482720.1| acetolactate synthase 3 regulatory subunit [Frankia sp. CcI3]
gi|86569182|gb|ABD12991.1| acetolactate synthase, small subunit [Frankia sp. CcI3]
Length = 174
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ + G++ V + G NI +G ++ + + + ++ L V +
Sbjct: 4 HTLSVLVENKPGVLARVSGLFSRRGFNIESLAVGPTEQLDISRMTIVVVVEDLPLEQVTK 63
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 64 QLNKLINVLKI 74
>gi|302185507|ref|ZP_07262180.1| RelA/SpoT protein [Pseudomonas syringae pv. syringae 642]
Length = 599
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 500 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 559
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 560 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 594
>gi|302865804|ref|YP_003834441.1| acetolactate synthase small subunit [Micromonospora aurantiaca
ATCC 27029]
gi|315502349|ref|YP_004081236.1| acetolactate synthase, small subunit [Micromonospora sp. L5]
gi|302568663|gb|ADL44865.1| acetolactate synthase, small subunit [Micromonospora aurantiaca
ATCC 27029]
gi|315408968|gb|ADU07085.1| acetolactate synthase, small subunit [Micromonospora sp. L5]
Length = 171
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +G +++ + + + + + S L V +
Sbjct: 4 HTLSVLVENKPGVLARVSGLFSRRGFNIDSLAVGETENPDVSRITIVVNAESSPLEQVTK 63
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 64 QLNKLVNVLKI 74
>gi|261419936|ref|YP_003253618.1| formyltetrahydrofolate deformylase [Geobacillus sp. Y412MC61]
gi|319766750|ref|YP_004132251.1| formyltetrahydrofolate deformylase [Geobacillus sp. Y412MC52]
gi|261376393|gb|ACX79136.1| formyltetrahydrofolate deformylase [Geobacillus sp. Y412MC61]
gi|317111616|gb|ADU94108.1| formyltetrahydrofolate deformylase [Geobacillus sp. Y412MC52]
Length = 300
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I I D GIV V + L E G NI L D + E++
Sbjct: 21 RILISCPDRPGIVAAVTSFLYEQGANIVESSQYSTDPEGGTFFLRLEFDCPNIAERKEEI 80
Query: 84 SV 85
Sbjct: 81 EA 82
>gi|213971907|ref|ZP_03400007.1| GTP pyrophosphokinase [Pseudomonas syringae pv. tomato T1]
gi|301384477|ref|ZP_07232895.1| GTP pyrophosphokinase [Pseudomonas syringae pv. tomato Max13]
gi|213923332|gb|EEB56927.1| GTP pyrophosphokinase [Pseudomonas syringae pv. tomato T1]
Length = 747
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 648 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 707
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 708 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 742
>gi|114777339|ref|ZP_01452336.1| GTP pyrophosphokinase [Mariprofundus ferrooxydans PV-1]
gi|114552121|gb|EAU54623.1| GTP pyrophosphokinase [Mariprofundus ferrooxydans PV-1]
Length = 646
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEK 82
+ I D G++ + +IL + +N+ ++ T+ A + + D L V +K
Sbjct: 572 LVIEAIDRTGLLKDITSILSDLKVNVLSVQTLSNKDTQTADMQIMMEIEDLEQLQKVTDK 631
Query: 83 LSVNVTIRFV 92
+ + V
Sbjct: 632 IMQLPNVLKV 641
>gi|307246755|ref|ZP_07528823.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|307255739|ref|ZP_07537542.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307260191|ref|ZP_07541900.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
gi|306852330|gb|EFM84567.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|306861299|gb|EFM93290.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306865736|gb|EFM97615.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
Length = 568
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 9/82 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLC 70
++ D+++ D G++ + N + NI + + + +
Sbjct: 491 DHLDVDIELE-------IKDQPGVLASLTNAIASMNSNIGTVESRPNGTGNYQVKMRISV 543
Query: 71 IDGSILNSVLEKLSVNVTIRFV 92
D + L V++KL+ + V
Sbjct: 544 TDNAHLYVVIQKLTKVNGVVRV 565
>gi|289628370|ref|ZP_06461324.1| GTP pyrophosphokinase [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289648124|ref|ZP_06479467.1| GTP pyrophosphokinase [Pseudomonas syringae pv. aesculi str. 2250]
gi|330866047|gb|EGH00756.1| GTP pyrophosphokinase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 747
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 648 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 707
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 708 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 742
>gi|311742335|ref|ZP_07716144.1| GTP diphosphokinase [Aeromicrobium marinum DSM 15272]
gi|311313963|gb|EFQ83871.1| GTP diphosphokinase [Aeromicrobium marinum DSM 15272]
Length = 779
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 28 IVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
I D ++ + ++ + +NI A GR + + +F D L VL+ +
Sbjct: 708 IEALDRPRLLSDITRVMSDQHVNILSAALSTGRDRVAKIKFTFEMGDAKHLGHVLQAVRT 767
Query: 86 NVTIRFV 92
+ V
Sbjct: 768 VEGVFDV 774
>gi|56550982|ref|YP_161821.1| (p)ppGpp synthetase I, SpoT/RelA [Zymomonas mobilis subsp. mobilis
ZM4]
gi|56542556|gb|AAV88710.1| (p)ppGpp synthetase I, SpoT/RelA [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 721
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 24/79 (30%), Gaps = 8/79 (10%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN- 77
+ + + ++ + G + V I G + NI + L + + + +
Sbjct: 636 AEGATVRLKVIVKNQAGALGVVATIFGAHKANIINLVLA---DRDENFHVFNVTLEVRDL 692
Query: 78 ----SVLEKLSVNVTIRFV 92
+L L +
Sbjct: 693 QHLMRILAALRAADGVVQA 711
>gi|66046924|ref|YP_236765.1| RelA/SpoT protein [Pseudomonas syringae pv. syringae B728a]
gi|63257631|gb|AAY38727.1| RelA/SpoT protein [Pseudomonas syringae pv. syringae B728a]
Length = 747
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 648 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 707
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 708 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 742
>gi|256371735|ref|YP_003109559.1| (p)ppGpp synthetase I, SpoT/RelA [Acidimicrobium ferrooxidans DSM
10331]
gi|256008319|gb|ACU53886.1| (p)ppGpp synthetase I, SpoT/RelA [Acidimicrobium ferrooxidans DSM
10331]
Length = 721
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 13/104 (12%), Positives = 34/104 (32%), Gaps = 22/104 (21%)
Query: 1 VFSDGKPRFIKIQ-------EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAH 53
+ + G R +++ ++ I D ++ V +L E+ +NI
Sbjct: 609 LLAQGPERMVEVDWAGEHGSGFQMAIE-------IEALDRPRLLADVSRVLAEHHVNILA 661
Query: 54 FHLGRSQSTEHAISFLCIDGSILN-----SVLEKLSVNVTIRFV 92
GR ++ + + + + S+L + +
Sbjct: 662 SSSGR---GSDLVAAMRFEFELADPSHLSSILAGIRQLDGVFNA 702
>gi|313125046|ref|YP_004035310.1| regulator of amino acid metabolism, contains act domain
[Halogeometricum borinquense DSM 11551]
gi|312291411|gb|ADQ65871.1| predicted regulator of amino acid metabolism, contains ACT domain
[Halogeometricum borinquense DSM 11551]
Length = 167
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D GIV + L E I+I + T+ +L D + +L +LS I F
Sbjct: 104 DAPGIVAEITGRLAERDISIRQTISEDPEFTDDPKLYLVTDQPVPGDLLNELSS---ISF 160
Query: 92 VKQFEF 97
V+Q
Sbjct: 161 VRQISI 166
>gi|147676863|ref|YP_001211078.1| acetolactate synthase 3 regulatory subunit [Pelotomaculum
thermopropionicum SI]
gi|146272960|dbj|BAF58709.1| acetolactate synthase [Pelotomaculum thermopropionicum SI]
Length = 173
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ I+ + G++ V + G NI +GR+++ + + D IL V +
Sbjct: 3 HTLAILVENNPGVLARVAGLFSRRGFNIDSLAVGRTENPAVSRMTVVVEGDDHILEQVTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L V + +
Sbjct: 63 QLHKLVDVIKINDIT 77
>gi|330877091|gb|EGH11240.1| GTP pyrophosphokinase [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
gi|330966581|gb|EGH66841.1| GTP pyrophosphokinase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 747
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 648 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 707
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 708 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 742
>gi|257485907|ref|ZP_05639948.1| GTP pyrophosphokinase [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|320323401|gb|EFW79489.1| GTP pyrophosphokinase [Pseudomonas syringae pv. glycinea str. B076]
gi|320327598|gb|EFW83610.1| GTP pyrophosphokinase [Pseudomonas syringae pv. glycinea str. race
4]
gi|330876402|gb|EGH10551.1| GTP pyrophosphokinase [Pseudomonas syringae pv. glycinea str. race
4]
gi|330889400|gb|EGH22061.1| GTP pyrophosphokinase [Pseudomonas syringae pv. mori str. 301020]
gi|330986719|gb|EGH84822.1| GTP pyrophosphokinase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331013486|gb|EGH93542.1| GTP pyrophosphokinase [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 747
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 648 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 707
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 708 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 742
>gi|254383222|ref|ZP_04998575.1| acetolactate synthase 3 regulatory subunit [Streptomyces sp. Mg1]
gi|194342120|gb|EDX23086.1| acetolactate synthase 3 regulatory subunit [Streptomyces sp. Mg1]
Length = 174
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNS 78
+ + + ++ + GI+ + + G NI +G ++ + + + ++ L
Sbjct: 1 MSKHTLSVLVQNTPGILARIAALFSRRGFNIDSLAVGVTEHPDISRITIVVNVEDLPLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 VTKQLNKLVNVLKIVELE 78
>gi|159036770|ref|YP_001536023.1| acetolactate synthase 3 regulatory subunit [Salinispora arenicola
CNS-205]
gi|157915605|gb|ABV97032.1| acetolactate synthase, small subunit [Salinispora arenicola
CNS-205]
Length = 171
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +G +++ + + + + + S L V +
Sbjct: 4 HTLSVLVENKPGVLARVSGLFSRRGFNIGSLAVGETENPDVSRITIVVNAESSPLEQVTK 63
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 64 QLNKLVNVLKI 74
>gi|284044641|ref|YP_003394981.1| (p)ppGpp synthetase I, SpoT/RelA [Conexibacter woesei DSM 14684]
gi|283948862|gb|ADB51606.1| (p)ppGpp synthetase I, SpoT/RelA [Conexibacter woesei DSM 14684]
Length = 714
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 23/79 (29%), Gaps = 8/79 (10%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DG 73
++ I D ++ + E GINI + + + D
Sbjct: 634 FKVEIHIDG-------WDRHRLLEDLARTFSEAGINIVDARCTSNPPMIRNRFVIEVADT 686
Query: 74 SILNSVLEKLSVNVTIRFV 92
L++ + KL +
Sbjct: 687 KTLDTTITKLRNIEAVFDA 705
>gi|89055489|ref|YP_510940.1| homoserine dehydrogenase [Jannaschia sp. CCS1]
gi|88865038|gb|ABD55915.1| homoserine dehydrogenase [Jannaschia sp. CCS1]
Length = 428
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D G + V LGE GI+I +A + S + ++
Sbjct: 357 DKPGALAKVATALGENGISIDRMRQY-DHDGTNAPVLIITHKSARPDLDAAIAALPAT 413
>gi|71733843|ref|YP_275858.1| GTP pyrophosphokinase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71554396|gb|AAZ33607.1| GTP pyrophosphokinase [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 744
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 645 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 704
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 705 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 739
>gi|319651755|ref|ZP_08005881.1| acetolactate synthase small subunit [Bacillus sp. 2_A_57_CT2]
gi|317396574|gb|EFV77286.1| acetolactate synthase small subunit [Bacillus sp. 2_A_57_CT2]
Length = 172
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEK 82
IC+ + G++ + N+ + NI +G S+ + + D S + ++
Sbjct: 5 ICLTVMNRPGVLNRITNLFSKRNFNIESISVGLSEHEGMSRITCVVHVEDSSASEQITKQ 64
Query: 83 LSVNVTIRFVKQFE 96
L+ + + V
Sbjct: 65 LNKQIDVIKVTDIT 78
>gi|303252702|ref|ZP_07338864.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307248896|ref|ZP_07530907.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|302648441|gb|EFL78635.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|306854591|gb|EFM86783.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
Length = 568
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 9/82 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLC 70
++ D+++ D G++ + N + NI + + + +
Sbjct: 491 DHLDVDIELE-------IKDQPGVLASLTNAIASMNSNIGTVESRPNGTGNYQVKMRISV 543
Query: 71 IDGSILNSVLEKLSVNVTIRFV 92
D + L V++KL+ + V
Sbjct: 544 TDNAHLYVVIQKLTKVNGVVRV 565
>gi|298487964|ref|ZP_07006003.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298157515|gb|EFH98596.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 747
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 648 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 707
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 708 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 742
>gi|256391657|ref|YP_003113221.1| prephenate dehydrogenase [Catenulispora acidiphila DSM 44928]
gi|256357883|gb|ACU71380.1| Prephenate dehydrogenase [Catenulispora acidiphila DSM 44928]
Length = 361
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 30/81 (37%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+I + + ++ +D G + + G G+NI + S E + L
Sbjct: 280 RIPGKHGTASASYTAVPVLISDRPGELARLFAAAGSVGVNIEDVRIDHSPGREAGLVELL 339
Query: 71 IDGSILNSVLEKLSVNVTIRF 91
+D ++ + + L+ +
Sbjct: 340 VDPTVSDRLAADLAASGWTVQ 360
>gi|153005257|ref|YP_001379582.1| amino acid-binding ACT domain-containing protein [Anaeromyxobacter
sp. Fw109-5]
gi|152028830|gb|ABS26598.1| amino acid-binding ACT domain protein [Anaeromyxobacter sp.
Fw109-5]
Length = 129
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 30/96 (31%), Gaps = 22/96 (22%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVN--------------ADILGIVVFVGNILGEYG 48
G R + D + + D G V V + LGE G
Sbjct: 42 GRGFVRLV------VDRPGAAKRVLTAHGWETTVDEVVEVTVPDKPGAVGKVADRLGEAG 95
Query: 49 INIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
IN+ + ++G + L + + + L+ L
Sbjct: 96 INVQYAYVG--SAGSARTMNLYLAVPDVKAALKALR 129
>gi|301062645|ref|ZP_07203273.1| ACT domain protein [delta proteobacterium NaphS2]
gi|300443256|gb|EFK07393.1| ACT domain protein [delta proteobacterium NaphS2]
Length = 193
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 29/95 (30%), Gaps = 5/95 (5%)
Query: 5 GKPRFIKIQEINFDVDIGRL----MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G P + + + ++ + D+ G + L Y IN+
Sbjct: 74 GTPAISVLPRRDAAIPPAGHGAPFVLAVAGIDVPGNFSMLTTCLARYHINVESLACRTHG 133
Query: 61 STEHAISFLCIDGSILNSVLE-KLSVNVTIRFVKQ 94
I L + + + +LS + R VK
Sbjct: 134 DRFTIIGELTVPRDVDTKAVRLELSELLADREVKV 168
>gi|295099266|emb|CBK88355.1| Predicted transcriptional regulator, contains C-terminal CBS
domains [Eubacterium cylindroides T2-87]
Length = 215
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
I + D +G + + I E GINI+H + ++ A + D + E
Sbjct: 142 GARITVSVKDEVGAIGKLSAIFVEKGINISHIGVYSFEN-GVANLVIRCDTLDPKEICEA 200
Query: 83 LSVN 86
L +
Sbjct: 201 LEEH 204
>gi|229484921|sp|A4XI74|Y995_CALS8 RecName: Full=UPF0735 ACT domain-containing protein Csac_0995
Length = 150
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKL 83
+ +V D+ GI+ + NI+ + NI + A + I + SV E +
Sbjct: 72 TLALVLQDVPGILSKILNIISDTNANILTIN-QNIPLGGIATVTISIRTSDMTKSVKELI 130
Query: 84 SVNVTIRFVKQFEF 97
+ VK+ E
Sbjct: 131 QEIERVDGVKKIEI 144
>gi|158312945|ref|YP_001505453.1| acetolactate synthase 3 regulatory subunit [Frankia sp. EAN1pec]
gi|158108350|gb|ABW10547.1| acetolactate synthase, small subunit [Frankia sp. EAN1pec]
Length = 174
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ + G++ V + G NI +G ++ + + + ++ L V +
Sbjct: 4 HTLSVLVENKPGVLARVSGLFSRRGFNIESLAVGPTEHADVSRMTIVVAVEDLPLEQVTK 63
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 64 QLNKLVNVLKI 74
>gi|330960597|gb|EGH60857.1| RelA/SpoT protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 747
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 648 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 707
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 708 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 742
>gi|307262318|ref|ZP_07543966.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|306867981|gb|EFM99809.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
Length = 568
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 9/82 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLC 70
++ D+++ D G++ + N + NI + + + +
Sbjct: 491 DHLDVDIELE-------IKDQPGVLASLTNAIASMNSNIGTVESRPNGTGNYQVKMRISV 543
Query: 71 IDGSILNSVLEKLSVNVTIRFV 92
D + L V++KL+ + V
Sbjct: 544 TDNAHLYVVIQKLTKVNGVVRV 565
>gi|282900789|ref|ZP_06308729.1| Acetolactate synthase, small subunit [Cylindrospermopsis
raciborskii CS-505]
gi|281194319|gb|EFA69276.1| Acetolactate synthase, small subunit [Cylindrospermopsis
raciborskii CS-505]
Length = 177
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + ++ G NI +G ++ + + + D +L + +
Sbjct: 3 HTLSVLVEDEAGVLSRIASLFARRGFNIESLAVGPAEQEGISRITMVVPGDDRVLEQITK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 63 QLYKLINVLKVQDVT 77
>gi|56420271|ref|YP_147589.1| formyltetrahydrofolate deformylase [Geobacillus kaustophilus
HTA426]
gi|56380113|dbj|BAD76021.1| formyltetrahydrofolate hydrolase [Geobacillus kaustophilus
HTA426]
Length = 300
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I I D GIV V + L E G NI L D + E++
Sbjct: 21 RILISCPDRPGIVAAVTSFLYEQGANIVESSQYSTDPEGGTFFLRLEFDCPNIAERKEEI 80
Query: 84 SV 85
Sbjct: 81 EA 82
>gi|284161293|ref|YP_003399916.1| acetolactate synthase, small subunit [Archaeoglobus profundus DSM
5631]
gi|284011290|gb|ADB57243.1| acetolactate synthase, small subunit [Archaeoglobus profundus DSM
5631]
Length = 162
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVT 88
+ G++ V ++ G NI +G ++ + + + + D + V ++L+ +
Sbjct: 10 ENRPGVLARVASLFRRRGFNIDSLSVGTTERDDISRMTIVVNEDEKTVEQVTKQLNKLIE 69
Query: 89 IRFV 92
+ V
Sbjct: 70 VIKV 73
>gi|156937830|ref|YP_001435626.1| hypothetical protein Igni_1041 [Ignicoccus hospitalis KIN4/I]
gi|156566814|gb|ABU82219.1| transcriptional regulator, AbrB family [Ignicoccus hospitalis
KIN4/I]
Length = 142
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI---LNSVLEK 82
I ++ D G + + L E G+N + E A + + V E+
Sbjct: 59 IFVLFKDEKGKLAEIAEKLAEMGVNQLATSCKTVKKGESAECQIIAEVPKELDPKEVEER 118
Query: 83 LSVNVTIRFVKQFE 96
L + +
Sbjct: 119 LRALEGVSEASAVK 132
>gi|238925277|ref|YP_002938794.1| (p)ppGpp synthetase I, SpoT/RelA [Eubacterium rectale ATCC 33656]
gi|238876953|gb|ACR76660.1| (p)ppGpp synthetase I, SpoT/RelA [Eubacterium rectale ATCC 33656]
Length = 786
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS--VLEKLSVNVT 88
D G++V + I E INI+ S+ I ++EKL +
Sbjct: 718 HDRPGLLVDITKIFTEKEINISGIQSKTSKQGIATIEVFFNIKGRDQIKVLVEKLRQIES 777
Query: 89 IRFV 92
+ V
Sbjct: 778 VIDV 781
>gi|83644638|ref|YP_433073.1| GTP pyrophosphokinase [Hahella chejuensis KCTC 2396]
gi|83632681|gb|ABC28648.1| GTP pyrophosphokinase [Hahella chejuensis KCTC 2396]
Length = 746
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG---SILNSVLEK 82
+ I D G++ + +L IN+ + A L ++ +L + ++
Sbjct: 669 VVIEAYDRPGLLRDITLLLANEKINVTAALTNTDKKQSTADIRLTVEVTSIDVLGRMFDR 728
Query: 83 LSVNVTIRFVK 93
+ I +
Sbjct: 729 IRRLPNIIDAR 739
>gi|291562284|emb|CBL41100.1| ACT domain-containing protein [butyrate-producing bacterium SS3/4]
Length = 148
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI--DGSILNSVLE 81
+ D G++ + +I+ +Y NI H + ++ + + D + ++E
Sbjct: 71 TLVTQMMDEPGLLSDLLHIVADYRANILTIHQTIPVNGSATVTLSVEVLSDTGNVAGMVE 130
Query: 82 KLSVNVTIRFVKQF 95
++ ++ VK
Sbjct: 131 EIEHLKGVQNVKIL 144
>gi|269957170|ref|YP_003326959.1| acetolactate synthase small subunit [Xylanimonas cellulosilytica
DSM 15894]
gi|269305851|gb|ACZ31401.1| acetolactate synthase, small subunit [Xylanimonas cellulosilytica
DSM 15894]
Length = 173
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ + G++ V + NI +G ++ E + + +D L V +
Sbjct: 4 HTLSVLVENKPGVLTRVAGLFARRAFNIHSLAVGPTEHEEISRITVVVDVDALPLEQVTK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + + + E
Sbjct: 64 QLNKLVHVIKIVELE 78
>gi|295696212|ref|YP_003589450.1| amino acid-binding ACT domain protein [Bacillus tusciae DSM 2912]
gi|295411814|gb|ADG06306.1| amino acid-binding ACT domain protein [Bacillus tusciae DSM 2912]
Length = 254
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Query: 29 VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
++ + G++ + ++LG INI + + + ++ SVL +L +V
Sbjct: 10 IHKNRPGLLGDISSLLGMLSINILTINGVENTRRG---LLIQVEDRQKISVLRQLLRHVN 66
Query: 89 IRFVKQFE 96
V
Sbjct: 67 SIKVTALR 74
>gi|150395901|ref|YP_001326368.1| (p)ppGpp synthetase I, SpoT/RelA [Sinorhizobium medicae WSM419]
gi|150027416|gb|ABR59533.1| (p)ppGpp synthetase I, SpoT/RelA [Sinorhizobium medicae WSM419]
Length = 741
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 28/76 (36%), Gaps = 8/76 (10%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SV 79
I + + G + V + +NI +GR + S L D + + +
Sbjct: 667 RIAVSALNEPGTLAEVAQAIATTDVNIRSLSMGRVAAD---FSELQFDLEVWDLRQLNHL 723
Query: 80 LEKLSVNVTIRFVKQF 95
+ +L +I VK+
Sbjct: 724 MAQLKELPSISMVKRL 739
>gi|15964818|ref|NP_385171.1| putative GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
protein [Sinorhizobium meliloti 1021]
gi|307300888|ref|ZP_07580657.1| (p)ppGpp synthetase I, SpoT/RelA [Sinorhizobium meliloti BL225C]
gi|307320705|ref|ZP_07600117.1| (p)ppGpp synthetase I, SpoT/RelA [Sinorhizobium meliloti AK83]
gi|11321260|gb|AAG34109.1|AF306550_1 (p)ppGpp synthetase [Sinorhizobium meliloti]
gi|15073997|emb|CAC45644.1| Putative GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Sinorhizobium meliloti 1021]
gi|47716787|gb|AAT37571.1| RelA [Sinorhizobium meliloti]
gi|51451369|gb|AAU03121.1| RelA [Sinorhizobium meliloti]
gi|306893632|gb|EFN24406.1| (p)ppGpp synthetase I, SpoT/RelA [Sinorhizobium meliloti AK83]
gi|306903843|gb|EFN34429.1| (p)ppGpp synthetase I, SpoT/RelA [Sinorhizobium meliloti BL225C]
Length = 741
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 28/76 (36%), Gaps = 8/76 (10%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SV 79
I + + G + V + +NI +GR + S L D + + +
Sbjct: 667 RIAVSALNEPGTLAEVAQAIATTDVNIRSLSMGRVAAD---FSELQFDLEVWDLRQLNHL 723
Query: 80 LEKLSVNVTIRFVKQF 95
+ +L +I VK+
Sbjct: 724 MAQLKELPSISMVKRL 739
>gi|300741762|ref|ZP_07071783.1| acetolactate synthase, small subunit [Rothia dentocariosa M567]
gi|311113868|ref|YP_003985090.1| acetolactate synthase small subunit [Rothia dentocariosa ATCC
17931]
gi|300380947|gb|EFJ77509.1| acetolactate synthase, small subunit [Rothia dentocariosa M567]
gi|310945362|gb|ADP41656.1| acetolactate synthase small subunit [Rothia dentocariosa ATCC
17931]
Length = 166
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
+ ++ D G++ V + NI +G ++ + + + DG + +
Sbjct: 4 HTLSVLVEDKPGVLSRVTGLFSRRMFNIQSLAVGPTEVPDVSRITIVADGEPETLEQLTK 63
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 64 QLNKLIHVLKV 74
>gi|206901477|ref|YP_002249890.1| MgtC family protein [Dictyoglomus thermophilum H-6-12]
gi|206740580|gb|ACI19638.1| MgtC family protein [Dictyoglomus thermophilum H-6-12]
Length = 215
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL-CIDGSILN-SVLEKL 83
+ ++ D G + +G + GE I+I LG S + ++ L + I +L +L
Sbjct: 144 LNLIIEDRPGSIGEIGTLFGELNIDIKQIELGNSWGGKVSLKILVRLPQKISKNDLLLRL 203
Query: 84 SVNVTIRFVKQF 95
S ++ +
Sbjct: 204 SGLPSVVDAEII 215
>gi|320334562|ref|YP_004171273.1| Prephenate dehydrogenase [Deinococcus maricopensis DSM 21211]
gi|319755851|gb|ADV67608.1| Prephenate dehydrogenase [Deinococcus maricopensis DSM 21211]
Length = 361
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 18/70 (25%), Gaps = 13/70 (18%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ + D + V LG G+NI + + AI L
Sbjct: 294 LVVAVPDRPNQIGAVTQALGAAGVNIKDIEVLAIREEGGAIRL-------------GLES 340
Query: 86 NVTIRFVKQF 95
+ +
Sbjct: 341 VEDVASARTL 350
>gi|147772441|emb|CAN67345.1| hypothetical protein VITISV_030337 [Vitis vinifera]
Length = 201
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 28/69 (40%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D GI+ + + G NI +G ++ + ++L V+E+L
Sbjct: 74 HTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNEDKALFTIVVSGTETVLRQVVEQL 133
Query: 84 SVNVTIRFV 92
+ V + V
Sbjct: 134 NKLVNVLKV 142
>gi|256810165|ref|YP_003127534.1| acetolactate synthase, small subunit [Methanocaldococcus fervens
AG86]
gi|256793365|gb|ACV24034.1| acetolactate synthase, small subunit [Methanocaldococcus fervens
AG86]
Length = 168
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTI 89
+ G++ + + G NI+ +G +++ + + + + D IL V+++L+ + +
Sbjct: 13 NKPGVLQRISGLFTRRGFNISSITVGVTENPQISRVTIVVNGDDKILEQVVKQLNKLIDV 72
Query: 90 RFVKQFE 96
V + E
Sbjct: 73 IKVSELE 79
>gi|225386906|ref|ZP_03756670.1| hypothetical protein CLOSTASPAR_00654 [Clostridium asparagiforme
DSM 15981]
gi|225046918|gb|EEG57164.1| hypothetical protein CLOSTASPAR_00654 [Clostridium asparagiforme
DSM 15981]
Length = 762
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEKLS 84
I + +G+ + + E I+I ++ R+ A + D + + +K+
Sbjct: 691 IYANNRIGMFADISKVFTERQIDITSMNV-RTSKQGKATIIMTFDIHGMEELGRLTDKIR 749
Query: 85 VNVTIRFV 92
+ +
Sbjct: 750 QIEGVLDI 757
>gi|77918923|ref|YP_356738.1| ACT domain-containing protein [Pelobacter carbinolicus DSM 2380]
gi|77545006|gb|ABA88568.1| ACT domain-containing protein [Pelobacter carbinolicus DSM 2380]
Length = 144
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I + G + V +L GINI L S + ++ L +D + +KL
Sbjct: 4 HQVSIFLENKPGRLEKVTAVLKNIGINIRAMTLSTSSAGWGILNLL-VDH--PETACDKL 60
Query: 84 SV--NVTIRF 91
S + +
Sbjct: 61 SEEGHPAVLR 70
>gi|300864281|ref|ZP_07109161.1| acetolactate synthase 3 regulatory subunit [Oscillatoria sp. PCC
6506]
gi|300337746|emb|CBN54307.1| acetolactate synthase 3 regulatory subunit [Oscillatoria sp. PCC
6506]
Length = 194
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ D G++ + + G NI +G ++ + + + D I+ + +
Sbjct: 25 HTISVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQGGFSRITMVVPGDDRIIEQLTK 84
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 85 QLYKLINVLKVQDIT 99
>gi|17546046|ref|NP_519448.1| homoserine dehydrogenase [Ralstonia solanacearum GMI1000]
gi|17428342|emb|CAD15029.1| probable homoserine dehydrogenase oxidoreductase protein [Ralstonia
solanacearum GMI1000]
Length = 439
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 5/72 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVNV 87
D G++ + IL E GI+I S+ E + + ++ + + +
Sbjct: 365 DETGVLADITRILAESGISIDAMLQKESREGEPQTDIIMLSHVVVEKQVNAAIAAIEALP 424
Query: 88 TIRF-VKQFEFN 98
T+ V +
Sbjct: 425 TVLSKVTRLRME 436
>gi|330974365|gb|EGH74431.1| RelA/SpoT protein [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 327
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 228 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 287
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 288 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 322
>gi|260435780|ref|ZP_05789750.1| homoserine dehydrogenase [Synechococcus sp. WH 8109]
gi|260413654|gb|EEX06950.1| homoserine dehydrogenase [Synechococcus sp. WH 8109]
Length = 435
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVNVT 88
D G++ VG G+ ++I + I + + +N L+ +
Sbjct: 365 KDAPGVIGNVGGCFGQRNVSIQSIVQFNASDAGAEIVVITHEVSQRQMNETLDAIQALPE 424
Query: 89 I 89
+
Sbjct: 425 V 425
>gi|114562508|ref|YP_750021.1| transcriptional regulator, TyrR [Shewanella frigidimarina NCIMB
400]
gi|114333801|gb|ABI71183.1| transcriptional regulator, TyrR [Shewanella frigidimarina NCIMB
400]
Length = 512
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D +G+ + +L ++GIN+ + F I L ++ ++ ++
Sbjct: 8 IDRVGLAKDILVVLEKHGINLIAIDASN--KGFLFLQFAEISFETLRELMPQIRKVESVH 65
Query: 91 FVKQFEF 97
V+ F
Sbjct: 66 DVRTVSF 72
>gi|222524836|ref|YP_002569307.1| (p)ppGpp synthetase I SpoT/RelA [Chloroflexus sp. Y-400-fl]
gi|222448715|gb|ACM52981.1| (p)ppGpp synthetase I, SpoT/RelA [Chloroflexus sp. Y-400-fl]
Length = 788
Score = 38.9 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLG-RSQSTEHAISFLCIDGSILN--SVLEK 82
+ I D +G+ + N++ + GINI + G R + ++ S+ ++EK
Sbjct: 715 LRIEAWDRVGLWRDISNVIADAGINITDINQGKRWANGRTVLNVTVSLQSMAQLSPLIEK 774
Query: 83 LSVNVTIRFV 92
L+ + V
Sbjct: 775 LNRIPDVIDV 784
>gi|110834484|ref|YP_693343.1| GTP pyrophosphokinase [Alcanivorax borkumensis SK2]
gi|110647595|emb|CAL17071.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) [Alcanivorax borkumensis SK2]
Length = 746
Score = 38.9 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 29/89 (32%), Gaps = 14/89 (15%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R DV + D G++ V +L +N+ H Q A
Sbjct: 665 RIT----YPVDV-------FLRAWDRQGLLKDVIAVLANEKVNVTAVHTQSHQDDNTATM 713
Query: 68 FLCIDGSILN---SVLEKLSVNVTIRFVK 93
L ++ + L VL KL + V+
Sbjct: 714 LLTLEIATLGNLGKVLAKLDQLKGVLEVR 742
>gi|78043747|ref|YP_359045.1| acetoin utilization protein AcuB [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995862|gb|ABB14761.1| acetoin utilization protein AcuB [Carboxydothermus hydrogenoformans
Z-2901]
Length = 210
Score = 38.9 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 20/54 (37%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
D G++ V I+ E IN+ L + ++ +++++
Sbjct: 145 DRPGMLAEVAQIMKELNINVVSVFLAPKTENGLKTLVMRVETMNTKPIIDRIRA 198
>gi|85708515|ref|ZP_01039581.1| acetolactate synthase small subunit [Erythrobacter sp. NAP1]
gi|85690049|gb|EAQ30052.1| acetolactate synthase small subunit [Erythrobacter sp. NAP1]
Length = 171
Score = 38.9 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ R ++ + + GI+ + + G NI + +HA+S + I + +
Sbjct: 6 AESERHVLTVTVDNEPGILAKITGLFTARGYNIDSLTVADITE-DHAVSRITIVTNGPPA 64
Query: 79 VLEKLSV 85
V++++
Sbjct: 65 VIDQIEA 71
>gi|308177152|ref|YP_003916558.1| acetolactate synthase small subunit [Arthrobacter arilaitensis
Re117]
gi|307744615|emb|CBT75587.1| acetolactate synthase small subunit [Arthrobacter arilaitensis
Re117]
Length = 172
Score = 38.9 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNS 78
+ + + ++ D+ G++ V ++ NI +G ++ + + ++G L
Sbjct: 1 MAKHTLSVLVEDVPGVLTRVASLFARRAFNIHSLAVGPTEIPGISRMTVVVDVEGDSLEQ 60
Query: 79 VLEKLSVNVTIRFV 92
V ++L+ V + +
Sbjct: 61 VTKQLNKLVNVIKI 74
>gi|261337992|ref|ZP_05965876.1| acetolactate synthase, small subunit [Bifidobacterium gallicum
DSM 20093]
gi|270277494|gb|EFA23348.1| acetolactate synthase, small subunit [Bifidobacterium gallicum
DSM 20093]
Length = 184
Score = 38.9 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 7/71 (9%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
+ ++ + G++ V + NI + ++ + + + +D L+ +++
Sbjct: 14 HTLSVLVENRPGVLARVSGLFARRAFNINSLSVSPTERPDISRITVTAAVDEVPLDQIIK 73
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 74 QLNKLLHVLKI 84
>gi|84684014|ref|ZP_01011916.1| RelA/SpoT family protein [Maritimibacter alkaliphilus HTCC2654]
gi|84667767|gb|EAQ14235.1| RelA/SpoT family protein [Rhodobacterales bacterium HTCC2654]
Length = 707
Score = 38.9 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 26/71 (36%), Gaps = 11/71 (15%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ +V A+ G++ + ++GE NI++ + ++ + +D L
Sbjct: 628 TLNVVIANGPGVLGRICTLIGEQKANISNMTFVDRKP-DYYRLLIDVD----------LR 676
Query: 85 VNVTIRFVKQF 95
+ V
Sbjct: 677 DIEHLHAVMLV 687
>gi|296129017|ref|YP_003636267.1| acetolactate synthase, small subunit [Cellulomonas flavigena DSM
20109]
gi|296020832|gb|ADG74068.1| acetolactate synthase, small subunit [Cellulomonas flavigena DSM
20109]
Length = 174
Score = 38.9 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ + G++ V + NI +G ++ E + + +D L V +
Sbjct: 4 HTLSVLVENKPGVLTRVAGLFARRAFNIHSLAVGPTEHEEISRITVVVDVDALPLEQVTK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + + + E
Sbjct: 64 QLNKLVNVIKIVELE 78
>gi|260913271|ref|ZP_05919753.1| GTP diphosphokinase [Pasteurella dagmatis ATCC 43325]
gi|260632858|gb|EEX51027.1| GTP diphosphokinase [Pasteurella dagmatis ATCC 43325]
Length = 740
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 33/85 (38%), Gaps = 10/85 (11%)
Query: 14 EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID- 72
++ I+ +D G++ + IL I+++ Q + A + I+
Sbjct: 663 GFRLNIR-------IIASDRNGLLRDITTILANDKISVSGVSSRIDQKKQLATIDMEIEL 715
Query: 73 --GSILNSVLEKLSVNVTIRFVKQF 95
IL+ +L +LS + K+
Sbjct: 716 NNVQILSKILARLSKLEDVIEAKRL 740
>gi|32267249|ref|NP_861281.1| homoserine dehydrogenase [Helicobacter hepaticus ATCC 51449]
gi|32263302|gb|AAP78347.1| homoserine dehydrogenase [Helicobacter hepaticus ATCC 51449]
Length = 431
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 19/56 (33%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
D G++ V ILG++ I+I F + A L + L
Sbjct: 360 DKPGVLGQVSQILGQHNISIGAFLQKETNDKNIAKMLLSTHHCYERDINAALLELE 415
>gi|78222638|ref|YP_384385.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Geobacter
metallireducens GS-15]
gi|78193893|gb|ABB31660.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Geobacter
metallireducens GS-15]
Length = 899
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
++ + D G I D+ G+ + ++ GINI + S + + A+
Sbjct: 703 ITRLDH---ESDGGYSNFTICTLDVPGLFSMITGVMAANGINILGAQIHTSSNGK-ALDI 758
Query: 69 LCIDGS 74
L ++
Sbjct: 759 LQVNSP 764
>gi|163847013|ref|YP_001635057.1| RelA/SpoT family protein [Chloroflexus aurantiacus J-10-fl]
gi|163668302|gb|ABY34668.1| RelA/SpoT family protein [Chloroflexus aurantiacus J-10-fl]
Length = 788
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLG-RSQSTEHAISFLCIDGSILN--SVLEK 82
+ I D +G+ + N++ + GINI + G R + ++ S+ ++EK
Sbjct: 715 LRIEAWDRVGLWRDISNVIADAGINITDINQGKRWANGRTVLNVTVSLQSMAQLSPLIEK 774
Query: 83 LSVNVTIRFV 92
L+ + V
Sbjct: 775 LNRIPDVIDV 784
>gi|331005362|ref|ZP_08328746.1| GTP pyrophosphokinase [gamma proteobacterium IMCC1989]
gi|330420816|gb|EGG95098.1| GTP pyrophosphokinase [gamma proteobacterium IMCC1989]
Length = 748
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 7/92 (7%)
Query: 7 PRFIKIQEINFDVDIGRLMI--CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
R I++ + + I D +G++ V +L IN++ +
Sbjct: 656 ARIIQVD--WGEAPTQTYAVDVLIDAYDRIGLLSDVTTVLDSARINVSAMQTLSDRGENT 713
Query: 65 AISFLCIDG---SILNSVLEKLSVNVTIRFVK 93
+ ID + L+ +L +L+ + +
Sbjct: 714 VSMVVTIDIRDFAHLSHILARLNQLPNVATAR 745
>gi|322705250|gb|EFY96837.1| acetolactate synthase small subunit [Metarhizium anisopliae ARSEF
23]
Length = 317
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
R ++ + + G++ + IL G NI + ++ + + + + ++
Sbjct: 76 APPKRHILNCLVQNEPGVLSRLSGILAARGFNIDSLVVCNTEVEDLSRMTIVLTGQDGVV 135
Query: 77 NSVLEKLSVN 86
+L
Sbjct: 136 EQARRQLEDL 145
>gi|322695606|gb|EFY87411.1| acetolactate synthase small subunit precursor [Metarhizium acridum
CQMa 102]
Length = 317
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
R ++ + + G++ + IL G NI + ++ + + + + ++
Sbjct: 76 APPKRHILNCLVQNEPGVLSRLSGILAARGFNIDSLVVCNTEVEDLSRMTIVLTGQDGVV 135
Query: 77 NSVLEKLSVN 86
+L
Sbjct: 136 EQARRQLEDL 145
>gi|254517537|ref|ZP_05129593.1| acetolactate synthase [Clostridium sp. 7_2_43FAA]
gi|226911286|gb|EEH96487.1| acetolactate synthase [Clostridium sp. 7_2_43FAA]
Length = 170
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNS 78
+ R ++ ++ + G++ V + G NI +GR+++ E + + + + IL
Sbjct: 1 MERHVLSVLVRNSSGVLTRVSGLFARRGFNIDSLTVGRTENPEISRMTIVLMGNEDILEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
++L+ + V + +
Sbjct: 61 FTKQLNKLEDVLRVHELK 78
>gi|167748497|ref|ZP_02420624.1| hypothetical protein ANACAC_03241 [Anaerostipes caccae DSM 14662]
gi|317471973|ref|ZP_07931305.1| ACT domain-containing protein [Anaerostipes sp. 3_2_56FAA]
gi|167652489|gb|EDR96618.1| hypothetical protein ANACAC_03241 [Anaerostipes caccae DSM 14662]
gi|316900377|gb|EFV22359.1| ACT domain-containing protein [Anaerostipes sp. 3_2_56FAA]
Length = 147
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI----SFLCIDGSILNSVL 80
I D G++ V + Y NI H + + + + ++ + +++
Sbjct: 71 TFVIEVEDQPGVMATVLQVFANYKANILTIHQSIPINGKGVLTVSVDIVDMETDVS-AMI 129
Query: 81 EKLSVNVTIRFVKQF 95
E + I +VK
Sbjct: 130 ESVEKLDNITYVKII 144
>gi|222056879|ref|YP_002539241.1| amino acid-binding ACT domain protein [Geobacter sp. FRC-32]
gi|221566168|gb|ACM22140.1| amino acid-binding ACT domain protein [Geobacter sp. FRC-32]
Length = 188
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 9/86 (10%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--- 76
+ ++ + +D GIV V L + +NI + + E + L ++ +
Sbjct: 99 EGELCLVSVYGSDQPGIVYRVTRELADRKVNITDLNTRLIGTKEEPVYVLMLEAILPPGM 158
Query: 77 -----NSVLEKLSVNVTI-RFVKQFE 96
+LEKL + + V+
Sbjct: 159 SVENVEQLLEKLKKELNVEIKVRVIT 184
>gi|90414863|ref|ZP_01222829.1| hypothetical protein P3TCK_10283 [Photobacterium profundum 3TCK]
gi|90324041|gb|EAS40632.1| hypothetical protein P3TCK_10283 [Photobacterium profundum 3TCK]
Length = 168
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 34/96 (35%), Gaps = 7/96 (7%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR--SQSTEH 64
+ +K + V + + + ++D GIV + NIL + GINI R
Sbjct: 72 VKIVKSDQPQVFVKTEHITLKVESSDRPGIVNDITNILHDIGINIDRIENHRIGVPDLGK 131
Query: 65 AISFLCIDGSIL-----NSVLEKLSVNVTIRFVKQF 95
+ F + + ++E + V+
Sbjct: 132 TLFFAELSIDVPNQTNLEQLIESVQQVEGDMRVEVI 167
>gi|300789614|ref|YP_003769905.1| homoserine dehydrogenase [Amycolatopsis mediterranei U32]
gi|299799128|gb|ADJ49503.1| homoserine dehydrogenase [Amycolatopsis mediterranei U32]
Length = 441
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R + + AD G++ V ++G++IA + +S + A + + ++
Sbjct: 357 TPTRYHVSLSVADRAGVLAQVAQAFADHGVSIAA--VRQSDVGDRASLVVVTHQAPDAAL 414
Query: 80 ---LEKLSVNVTIRFV 92
++++ + V
Sbjct: 415 QSTVDEIGRLDVVHEV 430
>gi|171742655|ref|ZP_02918462.1| hypothetical protein BIFDEN_01769 [Bifidobacterium dentium ATCC
27678]
gi|283456267|ref|YP_003360831.1| GTP pyrophosphokinase/Guanosine
3',5'-bis(Diphosphate)3'-pyrophosphohydrolase
[Bifidobacterium dentium Bd1]
gi|171278269|gb|EDT45930.1| hypothetical protein BIFDEN_01769 [Bifidobacterium dentium ATCC
27678]
gi|283102901|gb|ADB10007.1| relA1 GTP pyrophosphokinase/Guanosine
3',5'-bis(Diphosphate)3'-pyrophosphohydrolase
[Bifidobacterium dentium Bd1]
Length = 774
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LN +L + +
Sbjct: 695 DRPHLLSDVTRVLSDHGVNIISGSISTGTDRVATSQFSFEMADPQHLNILLAAVRKIEGV 754
Query: 90 RFV 92
V
Sbjct: 755 FDV 757
>gi|147792338|emb|CAN61470.1| hypothetical protein VITISV_043824 [Vitis vinifera]
Length = 451
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 26/69 (37%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D G++ + + G NI +G ++ + +L V+E+L
Sbjct: 47 HTISVFVGDESGMINRIAGVFARRGYNIDSLAVGLNKDKALFTIVVSGTERVLQQVVEQL 106
Query: 84 SVNVTIRFV 92
V + V
Sbjct: 107 HKLVNVLKV 115
Score = 37.3 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE---HAISFLCIDGSILNSVL 80
+ +V + G++ V + G NI +G ++ D SI ++
Sbjct: 280 HTLSMVVNNAPGVLNLVTGVFARRGYNIQSLAVGHAEVEGLSRITTVVPGTDESINK-LV 338
Query: 81 EKLSVNVTIRFVKQFE 96
++L + + V+
Sbjct: 339 QQLKKLIDLHDVRDIT 354
>gi|29829274|ref|NP_823908.1| acetolactate synthase 3 regulatory subunit [Streptomyces
avermitilis MA-4680]
gi|29606381|dbj|BAC70443.1| acetolactate synthase subunit small [Streptomyces avermitilis
MA-4680]
Length = 175
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILN 77
+ + + ++ + G++ + + G NI +G ++ + + + + + L
Sbjct: 1 MSKHTLSVLVENKPGVLARITALFSRRGFNIDSLAVGVTEHPDISRITIVVNVIEALPLE 60
Query: 78 SVLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 QVTKQLNKLVNVLKIVELE 79
>gi|116199269|ref|XP_001225446.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88179069|gb|EAQ86537.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 472
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 7/76 (9%), Positives = 26/76 (34%), Gaps = 8/76 (10%)
Query: 10 IKIQEINFD-VDIGRL---MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ + E+ + + + ++ ++ G++ V IL E+ ++ + A
Sbjct: 383 VNLPEVTMRSITLEEHDHARVIYIHRNVPGVLRKVNEILAEHNVD----KQISDSKGDIA 438
Query: 66 ISFLCIDGSILNSVLE 81
+ + +
Sbjct: 439 YLMADVSDVKTQDIKD 454
>gi|306822532|ref|ZP_07455910.1| GTP diphosphokinase [Bifidobacterium dentium ATCC 27679]
gi|309801391|ref|ZP_07695518.1| GTP diphosphokinase [Bifidobacterium dentium JCVIHMP022]
gi|304554077|gb|EFM41986.1| GTP diphosphokinase [Bifidobacterium dentium ATCC 27679]
gi|308221906|gb|EFO78191.1| GTP diphosphokinase [Bifidobacterium dentium JCVIHMP022]
Length = 774
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LN +L + +
Sbjct: 695 DRPHLLSDVTRVLSDHGVNIISGSISTGTDRVATSQFSFEMADPQHLNILLAAVRKIEGV 754
Query: 90 RFV 92
V
Sbjct: 755 FDV 757
>gi|302910587|ref|XP_003050320.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731257|gb|EEU44607.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 470
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 7/74 (9%), Positives = 25/74 (33%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG---SILNSVLE 81
+ ++ ++ G++ V ILG++ ++ + A + + + +
Sbjct: 400 RVIFIHRNVPGVLRKVNEILGDHNVD----KQISDSRGDVAYLMADVSSVKYEQIKDIFD 455
Query: 82 KLSVNVTIRFVKQF 95
L + +
Sbjct: 456 SLEALSSRIMTRVL 469
>gi|163839791|ref|YP_001624196.1| acetolactate synthase 3 regulatory subunit [Renibacterium
salmoninarum ATCC 33209]
gi|162953267|gb|ABY22782.1| acetolactate synthase small subunit [Renibacterium salmoninarum
ATCC 33209]
Length = 170
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NS 78
+ R + ++ D G++ V ++ NI +G ++ + + +D
Sbjct: 1 MDRHTLSVLVEDKPGVLTRVASLFARRAFNINSLAVGPTEVPGVSRMTVVVDAPGDLIEQ 60
Query: 79 VLEKLSVNVTIRFV 92
V ++L+ + + +
Sbjct: 61 VTKQLNKLINVIKI 74
>gi|302341778|ref|YP_003806307.1| acetolactate synthase, small subunit [Desulfarculus baarsii DSM
2075]
gi|301638391|gb|ADK83713.1| acetolactate synthase, small subunit [Desulfarculus baarsii DSM
2075]
Length = 192
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLEKLSVNVT 88
+ G++ V + G NI +G ++ + + + + G + +++L V+
Sbjct: 13 RNEPGVLARVAGLFARRGFNINSLAVGETEDPQVSRITVVVKGDPHTVDQAVKQLRRLVS 72
Query: 89 IRFVK 93
+ V+
Sbjct: 73 VIKVR 77
>gi|224133576|ref|XP_002327629.1| predicted protein [Populus trichocarpa]
gi|222836714|gb|EEE75107.1| predicted protein [Populus trichocarpa]
Length = 579
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 5/84 (5%)
Query: 12 IQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI 71
I I D ++ + ++L E G+NI H S ++ +
Sbjct: 177 INSTPCRSRP-MHEITFSTVDRPKLLSQLTSLLAEIGLNIQEAHAF-STVDGFSLDVFVV 234
Query: 72 DGSILNSVLEKLSVN--VTIRFVK 93
DG + E+L I K
Sbjct: 235 DGWLCEET-EELKNALEKEILKAK 257
>gi|127512366|ref|YP_001093563.1| transcriptional regulator, TyrR [Shewanella loihica PV-4]
gi|126637661|gb|ABO23304.1| transcriptional regulator, TyrR [Shewanella loihica PV-4]
Length = 514
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D +G+ + IL YGIN+ + F ++ +L+ +L + +
Sbjct: 8 IDRVGLAKDILVILEGYGINLIAIDASNQ--GFLYLQFAEVNFDVLSELLPLIRKVEGVH 65
Query: 91 FVKQFEF 97
V+ F
Sbjct: 66 DVRTVSF 72
>gi|148260301|ref|YP_001234428.1| homoserine dehydrogenase [Acidiphilium cryptum JF-5]
gi|326403491|ref|YP_004283573.1| homoserine dehydrogenase [Acidiphilium multivorum AIU301]
gi|146401982|gb|ABQ30509.1| homoserine dehydrogenase [Acidiphilium cryptum JF-5]
gi|325050353|dbj|BAJ80691.1| homoserine dehydrogenase [Acidiphilium multivorum AIU301]
Length = 429
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL---CIDGSILNSVLEKLSVNVT 88
D G++ V +L ++GI++ + + D + + + L +++
Sbjct: 357 DQPGVIADVTAVLRDHGISLETMLQRGRSPGDVVPVVIITHETDEAAMAAALVQIAALPA 416
Query: 89 IRF 91
++
Sbjct: 417 VQE 419
>gi|315924736|ref|ZP_07920953.1| ACT domain protein [Pseudoramibacter alactolyticus ATCC 23263]
gi|315621635|gb|EFV01599.1| ACT domain protein [Pseudoramibacter alactolyticus ATCC 23263]
Length = 136
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 16/62 (25%), Gaps = 4/62 (6%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
I + + G + + +L + INI S + +
Sbjct: 2 PNQISLFAENKKGALHAITAVLADANININTMLTNDSAEYGIVRLIVD----RPEEAIAA 57
Query: 83 LS 84
L
Sbjct: 58 LK 59
>gi|78357210|ref|YP_388659.1| acetolactate synthase 3 regulatory subunit [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
gi|78219615|gb|ABB38964.1| acetolactate synthase, small subunit [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 163
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ ++ + G++ V + G NI ++ + ++ + D I+ +++
Sbjct: 3 HVLSVLVENEPGVLSRVAGLFSGRGFNIESLNVAPTLEAGVSLMTISTSGDDQIIEQIVK 62
Query: 82 KLSVNVTIRFV 92
+L VT+ V
Sbjct: 63 QLRKLVTVIKV 73
>gi|196250930|ref|ZP_03149614.1| amino acid-binding ACT domain protein [Geobacillus sp. G11MC16]
gi|196209571|gb|EDY04346.1| amino acid-binding ACT domain protein [Geobacillus sp. G11MC16]
Length = 128
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I D GIV V + L E G NI L D + E++
Sbjct: 21 RLLISCPDRPGIVAAVTSFLYEQGANIVESSQYSTDPEGGTFFLRLEFDCPNIAGRKEEI 80
Query: 84 S 84
Sbjct: 81 E 81
>gi|330980192|gb|EGH78362.1| RelA/SpoT protein [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 355
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 256 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 315
Query: 62 TEHAISFLCIDGSILNSV---LEKLSVNVTIRFVK 93
A+ L I+ L+++ L ++S I +
Sbjct: 316 DNTALMSLTIEIPGLDALGRFLGRISQLPNIIETR 350
>gi|154150987|ref|YP_001404605.1| acetolactate synthase, small subunit [Candidatus Methanoregula
boonei 6A8]
gi|153999539|gb|ABS55962.1| acetolactate synthase, small subunit [Methanoregula boonei 6A8]
Length = 167
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ I+ + G++ V + G NI +G + + + + + D + + V++
Sbjct: 4 HTLSILVENKAGVLSRVTGLFSRRGFNIESLAVGTCEEPDMSRITIVVIGDDAQVEQVMK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V
Sbjct: 64 QLNKLIDVIKVSDLT 78
>gi|238792207|ref|ZP_04635842.1| Acetolactate synthase, small subunit [Yersinia intermedia ATCC
29909]
gi|238728444|gb|EEQ19963.1| Acetolactate synthase, small subunit [Yersinia intermedia ATCC
29909]
Length = 110
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 7/70 (10%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKL 83
+ + + G++ + + N+ + + +L + D L ++ +L
Sbjct: 21 TLLLTVRNHPGVMSHICGLFARRAFNVEGILCMPLAGGDESRIWLQVLDDQRLLQMISQL 80
Query: 84 SVNVTIRFVK 93
+ V+
Sbjct: 81 EKLEDVLQVR 90
>gi|298291615|ref|YP_003693554.1| (p)ppGpp synthetase I, SpoT/RelA [Starkeya novella DSM 506]
gi|296928126|gb|ADH88935.1| (p)ppGpp synthetase I, SpoT/RelA [Starkeya novella DSM 506]
Length = 733
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEK 82
I +V + G + + ++GE NI + + + + + I D LN ++
Sbjct: 660 IVVVAINEPGSLAQIAQVIGERDGNIENLRMSSRSA-DFHRMVIDIGVYDLRHLNGIIAD 718
Query: 83 LSVNVTIRFVKQFE 96
L + V++
Sbjct: 719 LRARPVVSSVERVN 732
>gi|320106362|ref|YP_004181952.1| acetolactate synthase small subunit [Terriglobus saanensis
SP1PR4]
gi|319924883|gb|ADV81958.1| acetolactate synthase, small subunit [Terriglobus saanensis
SP1PR4]
Length = 205
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + G++ + ++ INIA +G ++ E + + D ++ ++
Sbjct: 3 HTFIALVDNKPGVLTRIASLFRRLNINIASLTVGETEREEVSRMTIVCDA--PDNAAHRI 60
Query: 84 SV 85
Sbjct: 61 RA 62
>gi|322515562|ref|ZP_08068543.1| guanosine-3,5-bis 3-pyrophosphohydrolase [Actinobacillus ureae ATCC
25976]
gi|322118365|gb|EFX90631.1| guanosine-3,5-bis 3-pyrophosphohydrolase [Actinobacillus ureae ATCC
25976]
Length = 568
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 29/79 (36%), Gaps = 9/79 (11%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDG 73
+ D+++ D G++ + N + NI + + + + D
Sbjct: 494 DVDIELE-------IKDQPGVLASLTNAIASMNSNIGTVESRPNGTGNYQVKMRISVTDN 546
Query: 74 SILNSVLEKLSVNVTIRFV 92
+ L V++KL+ + V
Sbjct: 547 AHLYVVIQKLTKVNGVIRV 565
>gi|184200668|ref|YP_001854875.1| acetolactate synthase 3 regulatory subunit [Kocuria rhizophila
DC2201]
gi|183580898|dbj|BAG29369.1| acetolactate synthase small subunit [Kocuria rhizophila DC2201]
Length = 169
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNS 78
+ R + ++ D G++ V + NI +G ++ + + DG +L
Sbjct: 1 MSRHTLSVLVEDKPGVLTRVAGLFARRAFNIHSLAVGPTELPGISRITVVVDADGELLEQ 60
Query: 79 VLEKLSVNVTIRFV 92
V ++L+ V + +
Sbjct: 61 VTKQLNKLVNVIKI 74
>gi|167949807|ref|ZP_02536881.1| homoserine dehydrogenase [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 157
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 4/63 (6%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVN 86
D G+V + ILGE GI+I E + + + ++ + ++
Sbjct: 81 EDKPGVVARIAGILGEAGISIEAIQQKEPAEGESLVPLVMLSHRVVEGQMNQAIAQIEAL 140
Query: 87 VTI 89
++
Sbjct: 141 DSV 143
>gi|111225206|ref|YP_716000.1| acetolactate synthase 3 regulatory subunit [Frankia alni ACN14a]
gi|111152738|emb|CAJ64482.1| acetolactate synthase III, valine-sensitive, small subunit
[Frankia alni ACN14a]
Length = 174
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ + G++ V + G NI +G ++ + + + ++ L V +
Sbjct: 4 HTLSVLVENKPGVLARVSGLFSRRGFNIESLAVGPTEHPDVSRMTIVVAVEDLPLEQVTK 63
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 64 QLNKLVNVLKI 74
>gi|330720606|gb|EGG98868.1| GTP pyrophosphokinase2C (p)ppGpp synthetase I [gamma
proteobacterium IMCC2047]
Length = 748
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSI-LNSVLEK 82
I I D G++ + +L +N+ + + + G + L VL+K
Sbjct: 672 ILIRALDRHGLLHDITGVLSRESVNMTAMSSKMDRRQGLVEMRMTIEVSGLVLLGRVLDK 731
Query: 83 LSVNVTIRFVK 93
+ + VK
Sbjct: 732 IGQIPNLIEVK 742
>gi|304310589|ref|YP_003810187.1| GTP pyrophosphokinase [gamma proteobacterium HdN1]
gi|301796322|emb|CBL44530.1| GTP pyrophosphokinase [gamma proteobacterium HdN1]
Length = 755
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSIL-NSVLEK 82
I I+ D G++ V ++L +N+ + H R +T L + G VL
Sbjct: 673 IVILCNDRQGLLRDVTSVLANAHVNVTGVNTHSERHTNTATIQVTLEVGGLARLGDVLTH 732
Query: 83 LSVNVTIRFVKQFE 96
+ ++ VK+
Sbjct: 733 IQQIPSVIEVKRLH 746
>gi|168041860|ref|XP_001773408.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675284|gb|EDQ61781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 417
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVL 80
+ I+ D G++ V + G NI +G +++ + + D SI +L
Sbjct: 244 HTLGILVNDAPGVLNRVTGVFARRGYNIQSLAVGPAETPGTSRILTVVPGTDESI-KKLL 302
Query: 81 EKLSVNVTIRFVKQFE 96
+LS + + V+
Sbjct: 303 SQLSKLIDVLAVQDIT 318
>gi|153810055|ref|ZP_01962723.1| hypothetical protein RUMOBE_00436 [Ruminococcus obeum ATCC 29174]
gi|149834233|gb|EDM89313.1| hypothetical protein RUMOBE_00436 [Ruminococcus obeum ATCC 29174]
Length = 150
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 5/82 (6%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID----G 73
+ + I D G++ V + + NI H A L +D
Sbjct: 67 EARGKTITFIIQMDDEPGLLSVVLQTIAHFHGNILTIHQSI-PINGIATLTLSVDILPGE 125
Query: 74 SILNSVLEKLSVNVTIRFVKQF 95
+++E++ I ++K
Sbjct: 126 GDAEAMVEEIESREGIHYLKIL 147
>gi|148642695|ref|YP_001273208.1| regulator of amino acid metabolism [Methanobrevibacter smithii ATCC
35061]
gi|222445809|ref|ZP_03608324.1| hypothetical protein METSMIALI_01452 [Methanobrevibacter smithii
DSM 2375]
gi|148551712|gb|ABQ86840.1| predicted regulator of amino acid metabolism [Methanobrevibacter
smithii ATCC 35061]
gi|222435374|gb|EEE42539.1| hypothetical protein METSMIALI_01452 [Methanobrevibacter smithii
DSM 2375]
Length = 171
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 26/58 (44%)
Query: 35 GIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
GI+ + I+ + GINI + ++ E+ I + + I N ++ + + V
Sbjct: 111 GILAAITKIISKKGINIRQAYAEDNELEENPILTVITENPIDNDLISEFLKIKGVNRV 168
>gi|302680442|ref|XP_003029903.1| hypothetical protein SCHCODRAFT_85799 [Schizophyllum commune H4-8]
gi|300103593|gb|EFI95000.1| hypothetical protein SCHCODRAFT_85799 [Schizophyllum commune H4-8]
Length = 335
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILN 77
+ ++ + + G++ V IL G NI + R++ + + + ++G ++
Sbjct: 90 PFKKHILNCLVQNEPGVLSRVSGILAGRGFNIDSLVVCRTEIRDLSRMCIVLNGQDGVVE 149
Query: 78 SVLEKLSVN 86
+L
Sbjct: 150 QARRQLEDL 158
>gi|288869578|ref|ZP_05975063.2| amino acid-binding protein [Methanobrevibacter smithii DSM 2374]
gi|288861604|gb|EFC93902.1| amino acid-binding protein [Methanobrevibacter smithii DSM 2374]
Length = 170
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 26/58 (44%)
Query: 35 GIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
GI+ + I+ + GINI + ++ E+ I + + I N ++ + + V
Sbjct: 110 GILAAITKIISKKGINIRQAYAEDNELEENPILTVITENPIDNDLISEFLKIKGVNRV 167
>gi|170098026|ref|XP_001880232.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644670|gb|EDR08919.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 346
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILN 77
+ ++ + + G++ V IL G NI + R++ + + + ++G ++
Sbjct: 96 PFKKHILNCLVQNEPGVLSRVSGILAGRGFNIDSLVVCRTEIRDLSRMCIVLNGQDGVVE 155
Query: 78 SVLEKLSVN 86
+L
Sbjct: 156 QARRQLEDL 164
>gi|163867987|ref|YP_001609191.1| GTP pyrophosphokinase [Bartonella tribocorum CIP 105476]
gi|161017638|emb|CAK01196.1| GTP pyrophosphokinase [Bartonella tribocorum CIP 105476]
Length = 740
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEKLSV 85
I+ + G + + I+ NI + R+ + L + D LN + +L
Sbjct: 669 ILAVNRPGSLAEITQIISANDANIQNLSFIRTAPDFTEMMIDLEVWDLKHLNRIFSQLKK 728
Query: 86 NVTIRFVKQFE 96
++ V++
Sbjct: 729 ADSVSTVRRVH 739
>gi|169612583|ref|XP_001799709.1| hypothetical protein SNOG_09415 [Phaeosphaeria nodorum SN15]
gi|111062487|gb|EAT83607.1| hypothetical protein SNOG_09415 [Phaeosphaeria nodorum SN15]
Length = 489
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 8/83 (9%)
Query: 10 IKIQEINFDV----DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ + E+N + L + ++ ++ G++ V N+L + NI E A
Sbjct: 393 VNLPEVNLRSLTHDEPNSLRVIYIHKNVPGVLRQVNNVLLHH--NIEKQMS--DSRGEIA 448
Query: 66 ISFLCIDGSILNSVLEKLSVNVT 88
I + +
Sbjct: 449 YLMADISDVKEEEIRDLFQSLEE 471
>gi|15668333|ref|NP_247129.1| acetolactate synthase 3 regulatory subunit [Methanocaldococcus
jannaschii DSM 2661]
gi|2501332|sp|Q57625|ILVH_METJA RecName: Full=Probable acetolactate synthase small subunit;
AltName: Full=Acetohydroxy-acid synthase small subunit;
Short=AHAS; Short=ALS
gi|1590918|gb|AAB98145.1| acetolactate synthase small subunit (ilvN) [Methanocaldococcus
jannaschii DSM 2661]
Length = 172
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTI 89
+ G++ + + G NI+ +G +++ + + + + D IL V+++L+ + +
Sbjct: 17 NKPGVLQRISGLFTRRGFNISSITVGITENPQISRVTIVVNGDDKILEQVIKQLNKLIDV 76
Query: 90 RFVKQFE 96
V + E
Sbjct: 77 IKVSELE 83
>gi|330949797|gb|EGH50057.1| RelA/SpoT protein [Pseudomonas syringae Cit 7]
Length = 747
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ ++
Sbjct: 648 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVTTRSNKE 707
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 708 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 742
>gi|323446980|gb|EGB02962.1| hypothetical protein AURANDRAFT_12151 [Aureococcus anophagefferens]
Length = 368
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 5 GKPR-FIKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G R + + +C+V + G++ + ++ GE G+NI
Sbjct: 302 GTIRDSVNFPACALPPRMESVNRVCVVTENKPGMLGELMSVFGEGGLNI--LQQVNMSRG 359
Query: 63 EHAISFLCI 71
+ A + + +
Sbjct: 360 DIAYNVIDL 368
>gi|296413016|ref|XP_002836214.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630023|emb|CAZ80405.1| unnamed protein product [Tuber melanosporum]
Length = 472
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
++ L + ++ + G++ V NILG+Y + + A I
Sbjct: 387 AEVSHLRVIFIHQNRPGVLRQVNNILGDYNV----EKQISDSRGDIAYMMADISKVDSAE 442
Query: 79 V 79
V
Sbjct: 443 V 443
>gi|183601843|ref|ZP_02963212.1| acetolactate synthase 3 regulatory subunit [Bifidobacterium
animalis subsp. lactis HN019]
gi|219682758|ref|YP_002469141.1| acetolactate synthase 3 regulatory subunit [Bifidobacterium
animalis subsp. lactis AD011]
gi|241190334|ref|YP_002967728.1| acetolactate synthase 3 regulatory subunit [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|241195740|ref|YP_002969295.1| acetolactate synthase 3 regulatory subunit [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|183218728|gb|EDT89370.1| acetolactate synthase 3 regulatory subunit [Bifidobacterium
animalis subsp. lactis HN019]
gi|219620408|gb|ACL28565.1| acetolactate synthase, small subunit [Bifidobacterium animalis
subsp. lactis AD011]
gi|240248726|gb|ACS45666.1| acetolactate synthase 3 regulatory subunit [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|240250294|gb|ACS47233.1| acetolactate synthase 3 regulatory subunit [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|289178057|gb|ADC85303.1| Acetolactate synthase small subunit [Bifidobacterium animalis
subsp. lactis BB-12]
gi|295793321|gb|ADG32856.1| acetolactate synthase 3 regulatory subunit [Bifidobacterium
animalis subsp. lactis V9]
Length = 184
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSV 79
R + ++ + G++ + + NI + ++ + + + ++ L +
Sbjct: 12 QRHTLSVLVENRPGVLARIAGLFARRAFNINSLSVSPTERPDISRITVTADVEEVPLEQI 71
Query: 80 LEKLSVNVTIRFV 92
+++L+ + + +
Sbjct: 72 IKQLNKLLHVLKI 84
>gi|119774170|ref|YP_926910.1| GTP diphosphokinase [Shewanella amazonensis SB2B]
gi|119766670|gb|ABL99240.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella amazonensis SB2B]
Length = 734
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN---SVLE 81
+ ++ D G++ + ++L N+ + A L ++ ++ VL
Sbjct: 661 RLRVLANDRTGLLRDLTSVLAAEKSNVLAMSSSSDIKNQTAAIELELELYNVDGLSRVLS 720
Query: 82 KLSVNVTIRFVKQF 95
KL + ++
Sbjct: 721 KLGQVDGVIEARRL 734
>gi|283138927|gb|ADB12530.1| putative GTP pyrophosphokinase RelA [uncultured bacterium 9F08]
Length = 736
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 39/100 (39%), Gaps = 21/100 (21%)
Query: 6 KPRFIKI-------QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINI-AHFHLG 57
+PR I++ + DV+ I D G+++ V ++L INI A L
Sbjct: 643 RPRLIEVEWGGSEEKTYPVDVE-------IEAIDRQGLLIDVYSVLANEKINILASTTLS 695
Query: 58 ----RSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVK 93
+ + + ID + VL +++ I V+
Sbjct: 696 DAKSHTARIDLTLEIADIDQL--SRVLGRINQLPNIVEVR 733
>gi|119026020|ref|YP_909865.1| GTP pyrophosphokinase [Bifidobacterium adolescentis ATCC 15703]
gi|118765604|dbj|BAF39783.1| probable GTP pyrophosphokinase [Bifidobacterium adolescentis ATCC
15703]
Length = 770
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G SF D LN++L + +
Sbjct: 691 DRPHLLSDVTRVLSDHGVNIISGSISTGTDCVATSQFSFEMADPQHLNTLLAAVRKIEGV 750
Query: 90 RFV 92
V
Sbjct: 751 FDV 753
>gi|28572714|ref|NP_789494.1| acetohydroxy acid synthase, small subunit [Tropheryma whipplei
TW08/27]
gi|28410846|emb|CAD67232.1| acetohydroxy acid synthase, small subunit [Tropheryma whipplei
TW08/27]
Length = 80
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRS-QSTEHAISFLCIDGSILNSVLEKL 83
I ++ D G++ + + G NI F R + + D ++ ++++L
Sbjct: 6 TISVLAKDTPGLLARLSCVFSRRGKNIISFSAVRDLDKIGFSRITIVCDPENIDQIIKQL 65
Query: 84 SVNVTIRFVKQ 94
+ V + +
Sbjct: 66 NKLVDVLDARL 76
>gi|229818310|ref|ZP_04448591.1| hypothetical protein BIFANG_03610 [Bifidobacterium angulatum DSM
20098]
gi|229784180|gb|EEP20294.1| hypothetical protein BIFANG_03610 [Bifidobacterium angulatum DSM
20098]
Length = 184
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 7/73 (9%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSV 79
R + ++ + G++ V + NI + ++ + + + ++ L +
Sbjct: 12 ERHTLSVLVENRPGVLARVAGLFARRAFNINSLSVSPTERPDISRITVTADVEAIPLEQI 71
Query: 80 LEKLSVNVTIRFV 92
+++L+ + + +
Sbjct: 72 IKQLNKLLHVLKI 84
>gi|167767701|ref|ZP_02439754.1| hypothetical protein CLOSS21_02236 [Clostridium sp. SS2/1]
gi|167710440|gb|EDS21019.1| hypothetical protein CLOSS21_02236 [Clostridium sp. SS2/1]
Length = 161
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVL 80
I D G++ + NI Y NI H + + +D +++
Sbjct: 85 TFVIEVDDQPGVMASILNIFALYKANILTIHQSI-PINGKGLLTVSVDIEDSETDVSAMI 143
Query: 81 EKLSVNVTIRFVKQFEFN 98
+ + + +VK
Sbjct: 144 QDVEKIEDVSYVKIIAME 161
>gi|317485243|ref|ZP_07944124.1| acetolactate synthase [Bilophila wadsworthia 3_1_6]
gi|316923534|gb|EFV44739.1| acetolactate synthase [Bilophila wadsworthia 3_1_6]
Length = 163
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVT 88
+ G++ V + G NI ++ + ++ + D I+ ++++L
Sbjct: 10 ENEPGVLSRVAGLFSGRGFNIESLNVAPTLEDGVSLMTITTSGDEQIIEQIVKQLRKL-- 67
Query: 89 IRFVKQFEF 97
+ VK +F
Sbjct: 68 VTVVKVVDF 76
>gi|312962345|ref|ZP_07776836.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Pseudomonas
fluorescens WH6]
gi|311283272|gb|EFQ61862.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Pseudomonas
fluorescens WH6]
Length = 762
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 663 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVSQVLLNERINVLAVNTRSNKE 722
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 723 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 757
>gi|170054494|ref|XP_001863154.1| esterase 6 [Culex quinquefasciatus]
gi|167874760|gb|EDS38143.1| esterase 6 [Culex quinquefasciatus]
Length = 585
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 10/97 (10%)
Query: 4 DGKPRFIKIQEINFD-VDIGRLMICIVNADILGIVVFV----GNILGEYGINIAHFHLGR 58
G P+ + + + + M+ + G+ GN LG + NI L R
Sbjct: 211 GGDPKLVTLMGNSVGGSSVQNHMM---SPQSKGLFARAVSMSGNALGFWNYNIDRLDLAR 267
Query: 59 SQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
Q+ A+ + + ++E L+ I V+
Sbjct: 268 RQA--EAVGIVNATSMSTDQLVEALTEVDGIELVRSI 302
>gi|148653807|ref|YP_001280900.1| homoserine dehydrogenase [Psychrobacter sp. PRwf-1]
gi|148572891|gb|ABQ94950.1| homoserine dehydrogenase [Psychrobacter sp. PRwf-1]
Length = 445
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA------ISFLCIDGSIL 76
+ + D G++ V IL + GINI + + + ++
Sbjct: 363 GYYLRLQATDTPGVLADVTRILSDAGINIDAILQKPAHQKGQVPIIILTLPVIESQMNVA 422
Query: 77 NSVLEKLSVN-VTIRFVKQFEFN 98
+E L + ++ E +
Sbjct: 423 IKKIEALQAITSDVVRIRLNELD 445
>gi|311063779|ref|YP_003970504.1| acetolactate synthase small subunit IlvN [Bifidobacterium bifidum
PRL2010]
gi|313139582|ref|ZP_07801775.1| acetolactate synthase [Bifidobacterium bifidum NCIMB 41171]
gi|310866098|gb|ADP35467.1| IlvN Acetolactate synthase small subunit [Bifidobacterium bifidum
PRL2010]
gi|313132092|gb|EFR49709.1| acetolactate synthase [Bifidobacterium bifidum NCIMB 41171]
Length = 184
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSV 79
R + ++ + G++ + + NI + ++ + + + ++ L +
Sbjct: 12 ERHTLSVLVENRPGVLARIAGLFARRAFNINSLSVSPTERPDISRVTVTADVEAVPLEQI 71
Query: 80 LEKLSVNVTIRFV 92
+++L+ + + +
Sbjct: 72 IKQLNKLLHVLKI 84
>gi|303229249|ref|ZP_07316045.1| acetolactate synthase, small subunit [Veillonella atypica
ACS-134-V-Col7a]
gi|303230551|ref|ZP_07317305.1| acetolactate synthase, small subunit [Veillonella atypica
ACS-049-V-Sch6]
gi|302514792|gb|EFL56780.1| acetolactate synthase, small subunit [Veillonella atypica
ACS-049-V-Sch6]
gi|302516104|gb|EFL58050.1| acetolactate synthase, small subunit [Veillonella atypica
ACS-134-V-Col7a]
Length = 162
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVL 80
+ I+ + GI + + G N+ G + +A + + D IL+ V
Sbjct: 4 EHQVLIIAKNAPGIGTRILALFNRRGFNVTKMTSGITNQPGYARITITVEADDRILDQVQ 63
Query: 81 EKLSVNVTIRFVKQF 95
+++ + + VK F
Sbjct: 64 KQIYKLIDVVKVKVF 78
>gi|288919123|ref|ZP_06413462.1| acetolactate synthase, small subunit [Frankia sp. EUN1f]
gi|288349467|gb|EFC83705.1| acetolactate synthase, small subunit [Frankia sp. EUN1f]
Length = 174
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLE 81
+ ++ + G++ V + G NI +G ++ + + + ++ L V +
Sbjct: 4 HTLSVLVENKPGVLARVSGLFSRRGFNIESLAVGPTEHPDVSRMTIVVAVEDLPLEQVTK 63
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 64 QLNKLVNVLKI 74
>gi|260428126|ref|ZP_05782105.1| homoserine dehydrogenase [Citreicella sp. SE45]
gi|260422618|gb|EEX15869.1| homoserine dehydrogenase [Citreicella sp. SE45]
Length = 428
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 3/71 (4%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ + AD G + V + LGE G++I + A L + +
Sbjct: 345 TPAPYYLRMALADKPGALAKVASALGEAGVSIHRMR--QYDHVNEAAPVLIVTHKTTRAA 402
Query: 80 LE-KLSVNVTI 89
L+ L+
Sbjct: 403 LDTALAAMPGT 413
>gi|148658211|ref|YP_001278416.1| (p)ppGpp synthetase I SpoT/RelA [Roseiflexus sp. RS-1]
gi|148570321|gb|ABQ92466.1| (p)ppGpp synthetase I, SpoT/RelA [Roseiflexus sp. RS-1]
Length = 774
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 18/100 (18%)
Query: 5 GKPRFIKI--------QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHF-H 55
+ R +++ Q V I D +G+ V ++ + GINI
Sbjct: 670 DRARLVEVTWGAGVPKQGYPVPVR-------IEAWDRVGLWRDVSGVIADAGINIDAVEQ 722
Query: 56 LGRSQSTEHAISFLCIDGSILN--SVLEKLSVNVTIRFVK 93
+ + ++ SI ++L+KL+ + +
Sbjct: 723 VPTRRPGRAVLTVTLRIQSIAQLTAILDKLNRLSDVIEAR 762
>gi|256830450|ref|YP_003159178.1| acetolactate synthase, small subunit [Desulfomicrobium baculatum
DSM 4028]
gi|256579626|gb|ACU90762.1| acetolactate synthase, small subunit [Desulfomicrobium baculatum
DSM 4028]
Length = 159
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I + + G++ + + INI G ++ + + +C+ D + +V +
Sbjct: 3 HTISTLVRNEPGVLAAMAQAFQRHDINIRSISCGETEREDVSRMIICVEPDEGKITAVTD 62
Query: 82 KLSVNVTIRF 91
+++ +
Sbjct: 63 EIASLDFVLR 72
>gi|145596163|ref|YP_001160460.1| homoserine dehydrogenase [Salinispora tropica CNB-440]
gi|145305500|gb|ABP56082.1| homoserine dehydrogenase [Salinispora tropica CNB-440]
Length = 437
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 29/90 (32%), Gaps = 10/90 (11%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQST-----EHA 65
+ V + + D G++ V + ++ ++IA G + S E A
Sbjct: 338 DLPVRPMGEALTRYHISLDVTDRPGVLAAVAGVFAQHDVSIATVRQGSAGSGVAGRDEDA 397
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ++ + + V+
Sbjct: 398 DLVIVTHVAPDAALAATVQALRGLDTVRSV 427
>gi|329117170|ref|ZP_08245887.1| CBS domain protein [Streptococcus parauberis NCFD 2020]
gi|326907575|gb|EGE54489.1| CBS domain protein [Streptococcus parauberis NCFD 2020]
Length = 220
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + + I + +GI+ V + + E +NI + + + + L ID I +L
Sbjct: 138 LEGIRVVINTDNAVGILARVASTISEENLNIRRTVVDTRANGKTVVE-LQIDDDISPEIL 196
Query: 81 EK 82
++
Sbjct: 197 KE 198
>gi|289191607|ref|YP_003457548.1| acetolactate synthase, small subunit [Methanocaldococcus sp.
FS406-22]
gi|288938057|gb|ADC68812.1| acetolactate synthase, small subunit [Methanocaldococcus sp.
FS406-22]
Length = 168
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTI 89
+ G++ + + G NI+ +G +++++ + + + D IL V+++L+ + +
Sbjct: 13 NKPGVLQRISGLFTRRGFNISSITVGITENSQISRVTIVVNGDDKILEQVIKQLNKLIDV 72
Query: 90 RFVKQF 95
V +
Sbjct: 73 IKVSEL 78
>gi|289581398|ref|YP_003479864.1| amino acid-binding ACT domain protein [Natrialba magadii ATCC
43099]
gi|289530951|gb|ADD05302.1| amino acid-binding ACT domain protein [Natrialba magadii ATCC
43099]
Length = 167
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
I + NAD GIV V L + I+I + T+ +L D I + + +L
Sbjct: 98 IAVDNADQKGIVAQVTGTLADNDISIRQTISEDPEFTDEPRLYLITDQDISGTAITELRD 157
Query: 86 NVTIRFVKQFEF 97
FV++ E
Sbjct: 158 LE---FVRKIEL 166
>gi|224369196|ref|YP_002603360.1| IlvH [Desulfobacterium autotrophicum HRM2]
gi|223691913|gb|ACN15196.1| IlvH [Desulfobacterium autotrophicum HRM2]
Length = 166
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
+ I + ++ I+ + G++ + + G NI + ++ + + + D I+
Sbjct: 1 MTIKKHILSILVDNEPGVLSRIAGLFSGRGYNIDTLSVAQTMESTASRVTMETSGDEHIV 60
Query: 77 NSVLEKLSVNVTIRFV 92
++++L + + V
Sbjct: 61 EQIIKQLHKLINVITV 76
>gi|168010967|ref|XP_001758175.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690631|gb|EDQ76997.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 572
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
I D ++ + +L + G+NI H+ S + +++ +DG +
Sbjct: 172 HEITFSTIDKPKLLSQMSALLADVGLNIREAHVF-STTDGYSLDVFVVDGWPSEDTHD 228
>gi|303238437|ref|ZP_07324972.1| MgtC/SapB transporter [Acetivibrio cellulolyticus CD2]
gi|302594141|gb|EFL63854.1| MgtC/SapB transporter [Acetivibrio cellulolyticus CD2]
Length = 230
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 3/72 (4%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS---ILNSVL 80
++ + +I G + +G + G++ I I + S A+ + ++
Sbjct: 156 NILYVKTHNIPGQLGNIGCLFGKHDITIKNIEFLNSDDDNDALIKFLVKLPGNVKKEDII 215
Query: 81 EKLSVNVTIRFV 92
+L + I V
Sbjct: 216 GELQLIEGISKV 227
>gi|229591916|ref|YP_002874035.1| GTP pyrophosphokinase [Pseudomonas fluorescens SBW25]
gi|229363782|emb|CAY51208.1| GTP pyrophosphokinase [Pseudomonas fluorescens SBW25]
Length = 747
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 648 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVSQVLLNERINVLAVNTRSNKE 707
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 708 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 742
>gi|332178515|gb|AEE14204.1| acetolactate synthase, small subunit [Thermodesulfobium narugense
DSM 14796]
Length = 157
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ +V + G++ V + G NI + ++ + + + D ++ + +
Sbjct: 3 HTLSLVVINKSGVLARVAGLFARRGYNIESLTVAPMENEGFSRMTILVEGDDRVVEQIAK 62
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 63 QLHKLIDVIKV 73
>gi|297836488|ref|XP_002886126.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297331966|gb|EFH62385.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 546
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 37/105 (35%), Gaps = 19/105 (18%)
Query: 8 RFIK-IQEINFDVDIGR---LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ ++ + + + + I D ++ + ++LGE G+NI H S
Sbjct: 154 KIVEDVDSV-VNATLSTRPMHEITFSTIDKPKLLSQLTSLLGELGLNIQEAHAF-STVDG 211
Query: 64 HAISFLCIDG-----------SILNSVLEKLSVNVTIRFVKQFEF 97
++ +DG ++ +L KL + K F
Sbjct: 212 FSLDVFVVDGWSQEETDGLKDALSKEIL-KLKDQPGAKQ-KSISF 254
>gi|224282436|ref|ZP_03645758.1| acetolactate synthase 3 regulatory subunit [Bifidobacterium
bifidum NCIMB 41171]
Length = 182
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSV 79
R + ++ + G++ + + NI + ++ + + + ++ L +
Sbjct: 10 ERHTLSVLVENRPGVLARIAGLFARRAFNINSLSVSPTERPDISRVTVTADVEAVPLEQI 69
Query: 80 LEKLSVNVTIRFV 92
+++L+ + + +
Sbjct: 70 IKQLNKLLHVLKI 82
>gi|293604336|ref|ZP_06686743.1| homoserine dehydrogenase [Achromobacter piechaudii ATCC 43553]
gi|292817213|gb|EFF76287.1| homoserine dehydrogenase [Achromobacter piechaudii ATCC 43553]
Length = 451
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
++ + + D G++ + IL + I+I S I FL ++
Sbjct: 363 PIELVSTSYYLRLRVDDQPGVLADIARILADRSISIGSMIQQPSHIGGADIIFL-THEAV 421
Query: 76 LNSVLEKLSVNVTIRFVK 93
++ + + + FV+
Sbjct: 422 EGNINQAIERIEAMPFVR 439
>gi|256390401|ref|YP_003111965.1| homoserine dehydrogenase [Catenulispora acidiphila DSM 44928]
gi|256356627|gb|ACU70124.1| Homoserine dehydrogenase [Catenulispora acidiphila DSM 44928]
Length = 448
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 5/68 (7%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNV 87
D G++ V I E ++IA + +S A + + ++ + +L
Sbjct: 377 DDKPGVLSAVAGIFAEQDVSIAT--VRQSGRGPDATLVIVTHLAPDAALTATVARLRALD 434
Query: 88 TIRFVKQF 95
+R V
Sbjct: 435 FVRDVSSV 442
>gi|317497042|ref|ZP_07955370.1| ACT domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316895702|gb|EFV17856.1| ACT domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 146
Score = 38.5 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVL 80
I D G++ + NI Y NI H + + +D +++
Sbjct: 70 TFVIEVDDQPGVMASILNIFALYKANILTIHQSI-PINGKGLLTVSVDIEDSETDVSAMI 128
Query: 81 EKLSVNVTIRFVKQFEFN 98
+ + + +VK
Sbjct: 129 QDVEKIEDVSYVKVIAME 146
>gi|110589378|gb|ABG77198.1| homoserine dehydrogenase [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 158
Score = 38.5 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 4/63 (6%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVN 86
D G+V + ILGE GI+I E + + + ++ + ++
Sbjct: 82 EDKPGVVARIAGILGEAGISIEAIQQKEPAEGESLVPLVMLSHRVVEGQMNQAIAQIEAL 141
Query: 87 VTI 89
++
Sbjct: 142 DSV 144
>gi|220931646|ref|YP_002508554.1| Homoserine dehydrogenase [Halothermothrix orenii H 168]
gi|219992956|gb|ACL69559.1| Homoserine dehydrogenase [Halothermothrix orenii H 168]
Length = 428
Score = 38.5 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 32/92 (34%), Gaps = 11/92 (11%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R + I EI + + D G++ + +LG+ +++A + + +
Sbjct: 336 RVVDINEIE-----NSFYLRLQVRDKPGVLAQITKVLGDNKVSLAS--VLQKHRLTTVVP 388
Query: 68 FLCIDGSILNSV----LEKLSVNVTIRFVKQF 95
+ I + L++L + +
Sbjct: 389 LVLITHPVKEQFINKSLKELKKIEDVVSIDSL 420
>gi|299067382|emb|CBJ38581.1| homoserine dehydrogenase [Ralstonia solanacearum CMR15]
Length = 439
Score = 38.5 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 5/72 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVNV 87
D G++ + IL E GI+I S+ E + + ++ + + +
Sbjct: 365 DETGVLADITRILAESGISIDAMLQKESREGEPQTDIIMLSHVVVEKQVNAAIAAIEALP 424
Query: 88 TIRF-VKQFEFN 98
T+ V +
Sbjct: 425 TVLSKVTRLRME 436
>gi|296131901|ref|YP_003639148.1| acetolactate synthase, small subunit [Thermincola sp. JR]
gi|296030479|gb|ADG81247.1| acetolactate synthase, small subunit [Thermincola potens JR]
Length = 183
Score = 38.5 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +GR+++ + + + D ++L V +
Sbjct: 3 HTLAVLVENNPGVLTRVAGLFSRRGYNIDSLAVGRTENARISRMTIVVEGDDNVLEQVTK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 63 QLNKLIDVIKI 73
>gi|15827902|ref|NP_302165.1| acetolactate synthase 3 regulatory subunit [Mycobacterium leprae
TN]
gi|221230379|ref|YP_002503795.1| acetolactate synthase 3 regulatory subunit [Mycobacterium leprae
Br4923]
gi|6225560|sp|O33113|ILVH_MYCLE RecName: Full=Acetolactate synthase small subunit; AltName:
Full=Acetohydroxy-acid synthase small subunit;
Short=AHAS; Short=ALS
gi|2414547|emb|CAB16436.1| hypothetical protein [Mycobacterium leprae]
gi|13093455|emb|CAC30648.1| acetolactate synthase I small subunit [Mycobacterium leprae]
gi|219933486|emb|CAR71790.1| acetolactate synthase I small subunit [Mycobacterium leprae
Br4923]
Length = 169
Score = 38.5 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ V + G NI +G ++ + + + + + L V +
Sbjct: 7 HTLSVLVEDTPGVLARVAALFSRRGFNIESLAVGATECKTMSRMTIVVSAEETPLEQVTK 66
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 67 QLHKLINVIKV 77
>gi|282896535|ref|ZP_06304555.1| Acetolactate synthase, small subunit [Raphidiopsis brookii D9]
gi|281198641|gb|EFA73522.1| Acetolactate synthase, small subunit [Raphidiopsis brookii D9]
Length = 177
Score = 38.5 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + ++ G NI +G ++ + + + D ++ + +
Sbjct: 3 HTLSVLVEDEAGVLSRIASLFARRGFNIESLAVGPAEQEGISRITMVVPGDDRVIEQITK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 63 QLYKLINVLKVQDVT 77
>gi|329890085|ref|ZP_08268428.1| relA/SpoT family protein [Brevundimonas diminuta ATCC 11568]
gi|328845386|gb|EGF94950.1| relA/SpoT family protein [Brevundimonas diminuta ATCC 11568]
Length = 753
Score = 38.1 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS-----VLEKLSVN 86
+ G++ V +I+GE G NI + + Q + ID + ++ ++ L N
Sbjct: 686 NARGVLGQVASIIGEAGGNILNLSMAHRQHD---FYDIDIDVEVEDARHATMIIAALRAN 742
Query: 87 VTIRFV 92
+ V
Sbjct: 743 PYVDTV 748
>gi|317152669|ref|YP_004120717.1| chorismate mutase [Desulfovibrio aespoeensis Aspo-2]
gi|316942920|gb|ADU61971.1| chorismate mutase [Desulfovibrio aespoeensis Aspo-2]
Length = 367
Score = 38.1 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 18/77 (23%), Gaps = 7/77 (9%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL----- 76
+ + D G + V + IN+ R E D
Sbjct: 281 DKTTLLFTLPDKPGALARVLTTIAHQSINMTKLE-SRPFRGEKWKYVFFTDLECDLGKAK 339
Query: 77 -NSVLEKLSVNVTIRFV 92
VLE + V
Sbjct: 340 YEEVLEDIRQQCHTLRV 356
>gi|116753580|ref|YP_842698.1| amino acid-binding ACT domain-containing protein [Methanosaeta
thermophila PT]
gi|116665031|gb|ABK14058.1| amino acid-binding ACT domain protein [Methanosaeta thermophila PT]
Length = 144
Score = 38.1 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 14 EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG 73
+ ++ + D G + + + LGE INI + + + +E A+ + +D
Sbjct: 64 GFTVSMT---DVLAVEMRDTPGGLYEIVSALGENNINIDYAYAFVTAKSEKAMLIMRVDD 120
Score = 37.3 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 7/44 (15%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
+ G + V L + G+NI + ++ + + + +D
Sbjct: 12 ENRPGRMAKVSKTLSDAGVNIRAMTIA--EAGDFGVIRMVVDDP 53
>gi|312143760|ref|YP_003995206.1| acetolactate synthase, small subunit [Halanaerobium sp.
'sapolanicus']
gi|311904411|gb|ADQ14852.1| acetolactate synthase, small subunit [Halanaerobium sp.
'sapolanicus']
Length = 162
Score = 38.1 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ + + G++ V + NI ++G++++ E + + + D L V +
Sbjct: 3 HILSVSVLNKPGVLTRVAGLFSRRNFNIESLNVGKTENPEISRMTIVVHGDEKTLEQVTK 62
Query: 82 KLSVNVTIRFVKQF 95
+L + + +K+
Sbjct: 63 QLHKLINVLKIKEL 76
>gi|198276556|ref|ZP_03209087.1| hypothetical protein BACPLE_02751 [Bacteroides plebeius DSM
17135]
gi|198270644|gb|EDY94914.1| hypothetical protein BACPLE_02751 [Bacteroides plebeius DSM
17135]
Length = 185
Score = 38.1 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
I + + +I GI+ + + INI ++ S + + + V+
Sbjct: 8 YTIIVHSENIAGILNQITAVFTRRQINIESLNVSASSIKGVHKYTITCWTTPDVIDKVVT 67
Query: 82 KLSVNVTIRFVKQFE 96
++ + + F
Sbjct: 68 QIEKKIDVIQAHYFT 82
>gi|302869605|ref|YP_003838242.1| homoserine dehydrogenase [Micromonospora aurantiaca ATCC 27029]
gi|315503933|ref|YP_004082820.1| homoserine dehydrogenase [Micromonospora sp. L5]
gi|302572464|gb|ADL48666.1| homoserine dehydrogenase [Micromonospora aurantiaca ATCC 27029]
gi|315410552|gb|ADU08669.1| homoserine dehydrogenase [Micromonospora sp. L5]
Length = 434
Score = 38.1 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 8/86 (9%), Positives = 27/86 (31%), Gaps = 7/86 (8%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+ V + + D G++ V + + ++IA + + + A +
Sbjct: 342 DLPVRPMGEALTRYHISLDVADRPGVLAGVAGVFARHEVSIAT--VRQGPAGGDAELVIV 399
Query: 71 IDGSILNSVLEKLSVNVTIRFVKQFE 96
+ ++ + + V+
Sbjct: 400 THVAPDAALAATVGELRGLDIVRSVT 425
>gi|183221732|ref|YP_001839728.1| acetolactate synthase 3 regulatory subunit [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189911807|ref|YP_001963362.1| acetolactate synthase 3 regulatory subunit [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167776483|gb|ABZ94784.1| Acetolactate synthase, small subunit [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167780154|gb|ABZ98452.1| Acetolactate synthase small subunit [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 162
Score = 38.1 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ I+ + G++ V + G NI +G + + E + + + D ++ V
Sbjct: 3 HTLSILVNNHPGVMSHVSGLFTRRGYNIDSIAVGVTDNAEVSSMTIVLNGDDFVVGQVKN 62
Query: 82 KLSVNVTIRFV 92
+L + V
Sbjct: 63 QLLKLPDVLRV 73
>gi|254229487|ref|ZP_04922901.1| hypothetical protein
gi|151937952|gb|EDN56796.1| [Protein-PII] uridylyltransferase [Vibrio sp. Ex25]
Length = 301
Score = 38.1 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Query: 16 NFDVDI---GRLMIC-IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI 71
D + + V D G++ VG + IN+ + + L
Sbjct: 214 KVDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTS 273
Query: 72 D--GSILNSVLEKLSV 85
D G + ++L
Sbjct: 274 DAGGRLSEEQQDELRE 289
>gi|225024083|ref|ZP_03713275.1| hypothetical protein EIKCOROL_00951 [Eikenella corrodens ATCC
23834]
gi|224943108|gb|EEG24317.1| hypothetical protein EIKCOROL_00951 [Eikenella corrodens ATCC
23834]
Length = 434
Score = 38.1 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 27/77 (35%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G+V +G IL E GI+I + E+A + S
Sbjct: 344 PIDEITSSYYLRVSAQDKPGVVANIGRILAEQGISIEALLQKGVINHENAEIVILTHQSK 403
Query: 76 LNSVLEKLSVNVTIRFV 92
+ ++ + V
Sbjct: 404 EKHIKAAIAQIEALEHV 420
>gi|212639266|ref|YP_002315786.1| formyltetrahydrofolate deformylase [Anoxybacillus flavithermus WK1]
gi|212560746|gb|ACJ33801.1| Formyltetrahydrofolate hydrolase [Anoxybacillus flavithermus WK1]
Length = 325
Score = 38.1 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 1/62 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I D GIV V L E G NI + D ++ + +
Sbjct: 46 RLLISCPDQPGIVAAVTTFLYEKGANIVESSQYSTDPEGGTFFLRIEFDAPNISEREKAI 105
Query: 84 SV 85
Sbjct: 106 EK 107
>gi|262195478|ref|YP_003266687.1| homoserine dehydrogenase [Haliangium ochraceum DSM 14365]
gi|262078825|gb|ACY14794.1| Homoserine dehydrogenase [Haliangium ochraceum DSM 14365]
Length = 437
Score = 38.1 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 25/74 (33%), Gaps = 8/74 (10%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVN 86
D G++ + ++LGE+ ++IA I + LE+++
Sbjct: 359 RDEPGMLGQILSVLGEHAVSIAQVAQDPPGDDGEPIRVVVRTHEAREGDLRQALERIAAL 418
Query: 87 VTIRF----VKQFE 96
+ V+
Sbjct: 419 PGMAEPARVVRLIH 432
>gi|322419571|ref|YP_004198794.1| amino acid-binding ACT domain-containing protein [Geobacter sp.
M18]
gi|320125958|gb|ADW13518.1| amino acid-binding ACT domain protein [Geobacter sp. M18]
Length = 143
Score = 38.1 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
I I + G + V ILG+ G+NI L + + D SVL++
Sbjct: 6 ISIFIENKFGRLAEVTRILGDAGVNIRTLSLADTSDFGILRLIVN-DTEKAKSVLKE 61
>gi|269837585|ref|YP_003319813.1| acetolactate synthase, small subunit [Sphaerobacter thermophilus
DSM 20745]
gi|269786848|gb|ACZ38991.1| acetolactate synthase, small subunit [Sphaerobacter thermophilus
DSM 20745]
Length = 175
Score = 38.1 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ V ++ + G N+ +G S+ + L + D + V +
Sbjct: 7 HTLVVLVEDRPGVMNRVMSLFRQRGFNVDSIAVGHSEQPGLSRMTLVVQGDDRTIEQVTK 66
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 67 QLYKLLEVIKV 77
>gi|24213565|ref|NP_711046.1| hypothetical protein LA_0865 [Leptospira interrogans serovar Lai
str. 56601]
gi|24194353|gb|AAN48064.1|AE011271_4 hypothetical protein LA_0865 [Leptospira interrogans serovar Lai
str. 56601]
Length = 104
Score = 38.1 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 30/82 (36%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
D I + + G ++ + IL I+ + L R+ E + I +
Sbjct: 6 DFRTKYYTFDISSEEGSGTILRMIGILSRKSIDWLDWRLRRNVEGESQKIMIVIRTEEPD 65
Query: 78 SVLEKLSVNVTIRFVKQFEFNV 99
+L IR ++ FE N+
Sbjct: 66 KILNLFRSIPEIREIRYFELNL 87
>gi|218132310|ref|ZP_03461114.1| hypothetical protein BACPEC_00168 [Bacteroides pectinophilus ATCC
43243]
gi|217992825|gb|EEC58826.1| hypothetical protein BACPEC_00168 [Bacteroides pectinophilus ATCC
43243]
Length = 150
Score = 38.1 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 26/84 (30%), Gaps = 2/84 (2%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG- 73
+V + + D G++ V + EY NI H A L +D
Sbjct: 64 FRDNVRGRTITFVLSMDDTPGLLSQVLGKVAEYKANILTIH-QTIPINGVASLTLSVDIL 122
Query: 74 SILNSVLEKLSVNVTIRFVKQFEF 97
I + + + V+ +
Sbjct: 123 PITGDSSKMIEDIEQMEGVRYLKI 146
>gi|134102734|ref|YP_001108395.1| homoserine dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
gi|133915357|emb|CAM05470.1| homoserine dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
Length = 422
Score = 38.1 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R I + AD G++ V E+ ++I+ + + + A + + ++
Sbjct: 338 TPTRYHISLDVADKPGVLSQVAATFNEHDVSIS--VVRQQGRGDEASLVVVTHTAADAAL 395
Query: 80 ---LEKLSVNVTIRFV 92
++K++ +R V
Sbjct: 396 KSTVDKIAQLEVVREV 411
>gi|56478254|ref|YP_159843.1| homoserine dehydrogenase [Aromatoleum aromaticum EbN1]
gi|56314297|emb|CAI08942.1| Homoserine dehydrogenase (EC 1.1.1.3) (HDH), gene: thrA, metL
[Aromatoleum aromaticum EbN1]
Length = 436
Score = 38.1 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 9/88 (10%), Positives = 28/88 (31%), Gaps = 5/88 (5%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID--- 72
+ + + + D G++ + IL + GI+I + + +
Sbjct: 346 PIEEVVTSYYLRMRVEDKPGVLADITRILADSGISIEAMIQKEAPEGASQTDIIMLTHST 405
Query: 73 -GSILNSVLEKLSVNVTIR-FVKQFEFN 98
N+ + K+ ++ + +
Sbjct: 406 IEKNANAAIAKIEALPVVQGRITRLRME 433
>gi|46126181|ref|XP_387644.1| hypothetical protein FG07468.1 [Gibberella zeae PH-1]
Length = 474
Score = 38.1 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 9/91 (9%), Positives = 28/91 (30%), Gaps = 9/91 (9%)
Query: 10 IKIQEINFDV----DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ I E+ + + ++ ++ G++ V ILG++ ++ ++A
Sbjct: 385 VNIPEVQLRSLTSDEPDTARVIFIHRNVPGVLRKVNEILGDHNVD----KQISDSRGDNA 440
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
I + + +
Sbjct: 441 YLMADISNIKYEQIKDIYDSLEG-LSARVMT 470
>gi|301062446|ref|ZP_07203098.1| acetolactate synthase, small subunit [delta proteobacterium
NaphS2]
gi|300443446|gb|EFK07559.1| acetolactate synthase, small subunit [delta proteobacterium
NaphS2]
Length = 168
Score = 38.1 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEK 82
++ I+ + G++ V + G NI G + + + D ++ V+++
Sbjct: 4 ILSILVRNHPGVLSHVAGLFTRRGYNIESISAGETADPKITRITIVTYGDAKVIEQVIKQ 63
Query: 83 LSVNVTIRFVKQFEFN 98
+ + + V++ +
Sbjct: 64 IRKLIDVVKVQELTYE 79
>gi|157376063|ref|YP_001474663.1| transcriptional regulator, TyrR [Shewanella sediminis HAW-EB3]
gi|157318437|gb|ABV37535.1| transcriptional regulator, TyrR [Shewanella sediminis HAW-EB3]
Length = 512
Score = 38.1 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D +G+ + +L YGIN+ + F ++ L+ +L + +
Sbjct: 9 DRVGLAKDILMVLEGYGINLIAIDASNQ--GFLYLQFAEVNFDTLSELLPSIRKVEGVHD 66
Query: 92 VKQFEF 97
V+ F
Sbjct: 67 VRTVSF 72
>gi|310286878|ref|YP_003938136.1| Acetolactate synthase small subunit [Bifidobacterium bifidum S17]
gi|309250814|gb|ADO52562.1| Acetolactate synthase small subunit [Bifidobacterium bifidum S17]
Length = 186
Score = 38.1 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSV 79
R + ++ + G++ + + NI + ++ + + + ++ L +
Sbjct: 14 ERHTLSVLVENRPGVLARIAGLFARRAFNINSLSVSPTERPDISRVTVTADVEAVPLEQI 73
Query: 80 LEKLSVNVTIRFV 92
+++L+ + + +
Sbjct: 74 IKQLNKLLHVLKI 86
>gi|291296479|ref|YP_003507877.1| Prephenate dehydrogenase [Meiothermus ruber DSM 1279]
gi|290471438|gb|ADD28857.1| Prephenate dehydrogenase [Meiothermus ruber DSM 1279]
Length = 360
Score = 38.1 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
+ + D G + V LG G+NI +F + + AI
Sbjct: 295 LVVQVPDKPGQIATVSTALGNAGVNIKNFEVLAIRDEGGAI 335
>gi|295659496|ref|XP_002790306.1| acetolactate synthase small subunit [Paracoccidioides brasiliensis
Pb01]
gi|226281758|gb|EEH37324.1| acetolactate synthase small subunit [Paracoccidioides brasiliensis
Pb01]
Length = 337
Score = 38.1 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 22/54 (40%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG 73
R ++ + + G++ + IL G NI + ++ + + + + G
Sbjct: 89 PPERHVLNCLVQNEPGVLSRISGILAARGFNIDSLVVCNTEVEDLSRMTIVLHG 142
>gi|225680224|gb|EEH18508.1| acetolactate synthase small subunit [Paracoccidioides brasiliensis
Pb03]
gi|226287866|gb|EEH43379.1| acetolactate synthase small subunit [Paracoccidioides brasiliensis
Pb18]
Length = 337
Score = 38.1 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 22/54 (40%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG 73
R ++ + + G++ + IL G NI + ++ + + + + G
Sbjct: 89 PPERHVLNCLVQNEPGVLSRISGILAARGFNIDSLVVCNTEVEDLSRMTIVLHG 142
>gi|15606405|ref|NP_213785.1| aspartokinase [Aquifex aeolicus VF5]
gi|6225021|sp|O67221|AK_AQUAE RecName: Full=Aspartokinase; AltName: Full=Aspartate kinase
gi|2983613|gb|AAC07182.1| aspartokinase [Aquifex aeolicus VF5]
Length = 415
Score = 38.1 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 29/86 (33%), Gaps = 5/86 (5%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH---AI 66
+ ++ I D + D GI + LG+ I + + + +
Sbjct: 249 VAVRGITVDTK-ETRFTVVRVPDKPGIAAEIFKALGDAHI-VVDMIVQNVSHEGYTDMSF 306
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFV 92
+ D +++K++ + + V
Sbjct: 307 TVNKTDADKAEEIVKKIAQKIGAKEV 332
>gi|148272275|ref|YP_001221836.1| acetolactate synthase 3 regulatory subunit [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147830205|emb|CAN01138.1| putative acetolactate synthase, small (regulatory) subunit
[Clavibacter michiganensis subsp. michiganensis NCPPB
382]
Length = 169
Score = 38.1 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLE 81
++ ++ D G++ V + G NI +G S+ + + +D L V +
Sbjct: 3 HILSLLVEDKPGLLTRVAGLFARRGFNIESLAVGASEIEGLSRITVVVDVEALPLEQVTK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 63 QLNKLINVIKI 73
>gi|323450668|gb|EGB06548.1| hypothetical protein AURANDRAFT_11896 [Aureococcus anophagefferens]
Length = 368
Score = 38.1 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 5 GKPR-FIKIQEINFDVDIGR-LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G R + + +C+V + G++ + ++ GE G+NI
Sbjct: 302 GTIRDSVNFPACALPPRMESVNRVCVVTENKPGMLGELMSVFGEGGLNI--LQQVNMSRG 359
Query: 63 EHAISFLCI 71
+ A + + +
Sbjct: 360 DIAYNVIDL 368
>gi|269966249|ref|ZP_06180338.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus 40B]
gi|269829164|gb|EEZ83409.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus 40B]
Length = 877
Score = 38.1 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Query: 16 NFDVDI---GRLMIC-IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI 71
D + + V D G++ VG + IN+ + + L
Sbjct: 790 KVDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTS 849
Query: 72 D--GSILNSVLEKLSV 85
D G + ++L
Sbjct: 850 DAGGRLSEEQQDELRE 865
>gi|94968509|ref|YP_590557.1| homoserine dehydrogenase [Candidatus Koribacter versatilis
Ellin345]
gi|94550559|gb|ABF40483.1| homoserine dehydrogenase [Candidatus Koribacter versatilis
Ellin345]
Length = 431
Score = 38.1 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 8/78 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLG---RSQSTEHAISFL 69
+ + I D GI+ + N+L + GINI ++
Sbjct: 346 NDFE---TPHYVRFVI--QDKPGIIAAIANVLSKNGINIDSVLQKPGCPKTELPFVMTLE 400
Query: 70 CIDGSILNSVLEKLSVNV 87
+ L++ L +++
Sbjct: 401 TCSAAKLDNALAEIAKLD 418
>gi|262393517|ref|YP_003285371.1| [Protein-PII] uridylyltransferase [Vibrio sp. Ex25]
gi|262337111|gb|ACY50906.1| [Protein-PII] uridylyltransferase [Vibrio sp. Ex25]
Length = 874
Score = 38.1 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Query: 16 NFDVDI---GRLMIC-IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI 71
D + + V D G++ VG + IN+ + + L
Sbjct: 787 KVDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTS 846
Query: 72 D--GSILNSVLEKLSV 85
D G + ++L
Sbjct: 847 DAGGRLSEEQQDELRE 862
>gi|261492912|ref|ZP_05989458.1| hypothetical protein COK_1332 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496738|ref|ZP_05993113.1| hypothetical protein COI_2456 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261307577|gb|EEY08905.1| hypothetical protein COI_2456 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311453|gb|EEY12610.1| hypothetical protein COK_1332 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 705
Score = 38.1 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHL-GRSQSTEHAISFLCIDG-SILNSVLEKL 83
I + + G++ + + L + NI + R + + ++ +L KL
Sbjct: 633 IVLDIINEPGVLAGITSTLAKLNSNIGSINSEAREGNIYQVRVQISVENKEHSELILRKL 692
Query: 84 SVNVTIRFV 92
+
Sbjct: 693 LSVKGVVKA 701
>gi|254479350|ref|ZP_05092687.1| RelA/SpoT family protein [Carboxydibrachium pacificum DSM 12653]
gi|214034716|gb|EEB75453.1| RelA/SpoT family protein [Carboxydibrachium pacificum DSM 12653]
Length = 720
Score = 38.1 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID---GSILNSVLEKLS 84
I+ D G++ V +L + IN+ + R+ AI L ++ L V+ +L
Sbjct: 649 IMANDKFGLLTEVTGVLADAKINVKAIN-ARTTRDNIAIINLTLEITSKEQLEKVMNRLK 707
Query: 85 VNVTIRFV 92
+ V
Sbjct: 708 SLEGVMDV 715
>gi|91223471|ref|ZP_01258736.1| PII uridylyl-transferase [Vibrio alginolyticus 12G01]
gi|91191557|gb|EAS77821.1| PII uridylyl-transferase [Vibrio alginolyticus 12G01]
Length = 874
Score = 38.1 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Query: 16 NFDVDI---GRLMIC-IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI 71
D + + V D G++ VG + IN+ + + L
Sbjct: 787 KVDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTS 846
Query: 72 D--GSILNSVLEKLSV 85
D G + ++L
Sbjct: 847 DAGGRLSEEQQDELRE 862
>gi|53804046|ref|YP_114354.1| GTP pyrophosphokinase [Methylococcus capsulatus str. Bath]
gi|53757807|gb|AAU92098.1| GTP pyrophosphokinase [Methylococcus capsulatus str. Bath]
Length = 718
Score = 38.1 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 31/82 (37%), Gaps = 10/82 (12%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--- 71
+++ + D G++ + +L INI + + + + + +
Sbjct: 639 FPVEIE-------VRAFDRKGLLKDITQVLAHEHINILRTYTETNLQDQGVVMDITVEVH 691
Query: 72 DGSILNSVLEKLSVNVTIRFVK 93
D L++ LEK+ ++ +
Sbjct: 692 DLGQLSTALEKIGQIHNVQEAR 713
>gi|39996919|ref|NP_952870.1| protein-P-II uridylyltransferase [Geobacter sulfurreducens PCA]
gi|39983807|gb|AAR35197.1| protein-P-II uridylyltransferase, putative [Geobacter
sulfurreducens PCA]
gi|298505932|gb|ADI84655.1| GlnB (protein PII) uridylyltransferase, GlnD [Geobacter
sulfurreducens KN400]
Length = 902
Score = 38.1 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ G I DI G+ + ++ GINI + S + + + L ++ +
Sbjct: 711 EGGYSTYSICTWDIPGLFSMITGVMAANGINILGAQIHTSSNGK-VLDILQVNSPQGFMI 769
Query: 80 LEK 82
+E+
Sbjct: 770 IEE 772
>gi|20807650|ref|NP_622821.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Thermoanaerobacter tengcongensis MB4]
gi|20516195|gb|AAM24425.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases
[Thermoanaerobacter tengcongensis MB4]
Length = 718
Score = 38.1 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID---GSILNSVLEKLS 84
I+ D G++ V +L + IN+ + R+ AI L ++ L V+ +L
Sbjct: 647 IMANDKFGLLTEVTGVLADAKINVKAIN-ARTTRDNIAIINLTLEITSKEQLEKVMNRLK 705
Query: 85 VNVTIRFV 92
+ V
Sbjct: 706 SLEGVMDV 713
>gi|319789440|ref|YP_004151073.1| acetolactate synthase, small subunit [Thermovibrio ammonificans
HB-1]
gi|317113942|gb|ADU96432.1| acetolactate synthase, small subunit [Thermovibrio ammonificans
HB-1]
Length = 172
Score = 38.1 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS--TEHAISFLCIDGSILNSVLE 81
+I ++ + G + + + G NI ++G+++ D + +++
Sbjct: 9 HVISVLVENQPGALARIIELFSSRGYNIESLNVGQTEDPTISRITMVAKGDEHTIEQIVK 68
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 69 QLRRIIDVFKVRDLT 83
>gi|260587038|ref|ZP_05852951.1| ACT domain-containing protein PheB [Blautia hansenii DSM 20583]
gi|260542528|gb|EEX23097.1| ACT domain-containing protein PheB [Blautia hansenii DSM 20583]
Length = 181
Score = 38.1 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 9/73 (12%), Positives = 22/73 (30%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I D G++ V + ++ NI H + +++ ++ +
Sbjct: 105 TFIIQMDDEPGLLSAVLRAIAQFHGNILTIHQSIPMNGIASLTLSVAISAVEGDAAAMMD 164
Query: 85 VNVTIRFVKQFEF 97
I V +
Sbjct: 165 NIEHINGVHYLKI 177
>gi|198283171|ref|YP_002219492.1| UTP-GlnB uridylyltransferase, GlnD [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218665343|ref|YP_002425399.1| protein-P-II uridylyltransferase [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|198247692|gb|ACH83285.1| UTP-GlnB uridylyltransferase, GlnD [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218517556|gb|ACK78142.1| protein-P-II uridylyltransferase [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 862
Score = 38.1 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 8/86 (9%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG------ 73
+ I D G+ + L +NI + S+ +FL ID
Sbjct: 673 APEGSEVLIYGPDRPGLFQQITGALDRQSLNIIDARIDTSEDGRAIDTFLVIDNSHAFAH 732
Query: 74 --SILNSVLEKLSVNVTIRFVKQFEF 97
+ +L + V++ F
Sbjct: 733 SAQAHADLAAELRAVLEGEAVRKPRF 758
>gi|254362254|ref|ZP_04978368.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Mannheimia
haemolytica PHL213]
gi|153093829|gb|EDN74764.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Mannheimia
haemolytica PHL213]
Length = 705
Score = 38.1 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHL-GRSQSTEHAISFLCIDG-SILNSVLEKL 83
I + + G++ + + L + NI + R + + ++ +L KL
Sbjct: 633 IVLDIINEPGVLAGITSTLAKLNSNIGSINSEAREGNIYQVRVQISVENKEHSELILRKL 692
Query: 84 SVNVTIRFV 92
+
Sbjct: 693 LSVKGVVKA 701
>gi|225849673|ref|YP_002729907.1| glycine cleavage system regulatory protein [Persephonella marina
EX-H1]
gi|225645747|gb|ACO03933.1| glycine cleavage system regulatory protein [Persephonella marina
EX-H1]
Length = 176
Score = 38.1 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 2/74 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ V D GIV + +L E G NI + R + + + + I L +
Sbjct: 6 LTAVGEDRPGIVAGITKVLYEKGFNIEDSTMTRLNNEFTVMLIVTTEEDITEDELRE--S 63
Query: 86 NVTIRFVKQFEFNV 99
+ K NV
Sbjct: 64 FDKVAREKDLYINV 77
>gi|319903102|ref|YP_004162830.1| acetolactate synthase, small subunit [Bacteroides helcogenes P
36-108]
gi|319418133|gb|ADV45244.1| acetolactate synthase, small subunit [Bacteroides helcogenes P
36-108]
Length = 187
Score = 38.1 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + + G++ V + INI ++ S + D + V +
Sbjct: 6 YTIIVHSENFAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDTIEKVTK 65
Query: 82 KLSVNVTIRFVKQFE 96
++S + + F
Sbjct: 66 QISKKIDVLQAHYFT 80
>gi|303247740|ref|ZP_07334009.1| PAS modulated sigma54 specific transcriptional regulator, Fis
family [Desulfovibrio fructosovorans JJ]
gi|302490824|gb|EFL50723.1| PAS modulated sigma54 specific transcriptional regulator, Fis
family [Desulfovibrio fructosovorans JJ]
Length = 523
Score = 38.1 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS----ILNSVLE 81
+ + D +GIV + + L G+NI + + + A F+ ID ++L+
Sbjct: 4 LHLNFKDRVGIVSDISSQLARNGLNILTMEVVQKE--GCAHLFIEIDHGDKPCPRENILK 61
Query: 82 KLSVNVTIRFVKQFE 96
L+ + ++
Sbjct: 62 MLACFNDLLEIQFIS 76
>gi|296109652|ref|YP_003616601.1| acetolactate synthase, small subunit [Methanocaldococcus infernus
ME]
gi|295434466|gb|ADG13637.1| acetolactate synthase, small subunit [Methanocaldococcus infernus
ME]
Length = 167
Score = 38.1 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTI 89
+ G++ + + G NI +G +++ + + + D IL V+++L+ + +
Sbjct: 13 NKPGVLQRISGLFTRRGFNIHSITVGETENPNISRMTIVVNGDDKILEQVVKQLNKLIDV 72
Query: 90 RFVKQFE 96
V + +
Sbjct: 73 IKVSELK 79
>gi|254491769|ref|ZP_05104948.1| Homoserine dehydrogenase, NAD binding domain family [Methylophaga
thiooxidans DMS010]
gi|224463247|gb|EEF79517.1| Homoserine dehydrogenase, NAD binding domain family [Methylophaga
thiooxydans DMS010]
Length = 437
Score = 38.1 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS----VLEKLSVNV 87
D G++ + IL E GINI + + E + + + +++ + ++
Sbjct: 362 DKPGVLADITRILSEQGINIEAILQKQPEEHEGMVPIIMLTQAVVEKNMDQAIAQIEALD 421
Query: 88 TI 89
T+
Sbjct: 422 TV 423
>gi|223948575|gb|ACN28371.1| unknown [Zea mays]
Length = 531
Score = 38.1 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG-SILNSVLE- 81
+ D ++ + ++LGE G+NI H + +++ +DG +L+
Sbjct: 142 HEVIFACDDKPKLLSQLTSLLGELGLNIQEAHAYSTSDG-YSLDIFVVDGWEYEADILQS 200
Query: 82 KLSVNVTIRFVKQ 94
L + +K
Sbjct: 201 ALR--EGVDKIKY 211
>gi|88856760|ref|ZP_01131415.1| acetolactate synthase I small subunit [marine actinobacterium
PHSC20C1]
gi|88814057|gb|EAR23924.1| acetolactate synthase I small subunit [marine actinobacterium
PHSC20C1]
Length = 168
Score = 38.1 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCIDGSILNSVLE 81
++ ++ D G++ V + G NI +G S+ + ++ L V +
Sbjct: 3 HVLSLLVEDKPGLLTRVAGLFARRGFNIQSLAVGSSEIEGLSRITVVVDVEELPLEQVTK 62
Query: 82 KLSVNVTIRFVKQFEFNVD 100
+L+ + + K E + D
Sbjct: 63 QLNKLINVI--KIVELDPD 79
>gi|119025238|ref|YP_909083.1| acetolactate synthase 3 regulatory subunit [Bifidobacterium
adolescentis ATCC 15703]
gi|154486626|ref|ZP_02028033.1| hypothetical protein BIFADO_00443 [Bifidobacterium adolescentis
L2-32]
gi|118764822|dbj|BAF39001.1| acetolactate synthase small subunit [Bifidobacterium adolescentis
ATCC 15703]
gi|154084489|gb|EDN83534.1| hypothetical protein BIFADO_00443 [Bifidobacterium adolescentis
L2-32]
Length = 184
Score = 38.1 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 5/71 (7%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLE 81
+ ++ + G++ + + NI + ++ + + + ++ L +++
Sbjct: 14 HTLSVLVENRPGVLARIAGLFARRAFNINSLSVSPTERPDISRVTVTADVEEVPLEQIIK 73
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 74 QLNKLLHVLKI 84
>gi|330506660|ref|YP_004383088.1| acetolactate synthase, small subunit [Methanosaeta concilii GP-6]
gi|328927468|gb|AEB67270.1| acetolactate synthase, small subunit [Methanosaeta concilii GP-6]
Length = 163
Score = 38.1 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + G++ + + NI +G + + +++ + + D +L V++
Sbjct: 3 HIIAVIVENKSGVLTRIAGLFSRRSFNIDSLSVGATDNPDYSRMTISVQGDRDVLEQVIK 62
Query: 82 KLSVNVTIRFVKQF 95
+LS + + V +
Sbjct: 63 QLSKLINVIRVSEL 76
>gi|322706036|gb|EFY97618.1| D-3-phosphoglycerate dehydrogenase 1 [Metarhizium anisopliae ARSEF
23]
Length = 429
Score = 38.1 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 10/81 (12%), Positives = 29/81 (35%), Gaps = 10/81 (12%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ + ++ ++ G++ V ILG++ ++ + A I N
Sbjct: 353 EPNHARVIYIHRNVPGVLRKVNEILGDHNVD----KQISDSKGDVAYLMAD----ISNVR 404
Query: 80 LEKLSVNVTIRFVKQFEFNVD 100
E++ ++ F ++
Sbjct: 405 YEEIKDI--TESLEALSFELN 423
>gi|320527726|ref|ZP_08028896.1| CBS domain pair protein [Solobacterium moorei F0204]
gi|320131891|gb|EFW24451.1| CBS domain pair protein [Solobacterium moorei F0204]
Length = 225
Score = 38.1 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 5/65 (7%), Positives = 20/65 (30%), Gaps = 5/65 (7%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
++ D G+ V + + N+ + + + + + ++
Sbjct: 141 QGTRFVMLIDDKPGVFAQVTKLFAQENANVENIAVYHTDRGSEV-----VVKATGEVAVD 195
Query: 82 KLSVN 86
K++
Sbjct: 196 KMTKI 200
>gi|312130965|ref|YP_003998305.1| acetolactate synthase, small subunit [Leadbetterella byssophila
DSM 17132]
gi|311907511|gb|ADQ17952.1| acetolactate synthase, small subunit [Leadbetterella byssophila
DSM 17132]
Length = 178
Score = 38.1 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 23/69 (33%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
IC+ + +G++ + + INI + + + + I V + +
Sbjct: 4 YTICVYGENAVGLLNKITILFTRRRINIESLTVSETVRKGVSRFTIGIKHEKREEVEKLV 63
Query: 84 SVNVTIRFV 92
+ V
Sbjct: 64 RQIRKVVEV 72
>gi|161618623|ref|YP_001592510.1| RelA/SpoT family protein [Brucella canis ATCC 23365]
gi|161335434|gb|ABX61739.1| RelA/SpoT family protein [Brucella canis ATCC 23365]
Length = 750
Score = 38.1 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + + I NI + + R+ + + + D LN ++
Sbjct: 676 RISVSAINSPGSLAKIAQIAAANDANIHNLSMVRTAP-DFTEMIIDVEVWDLKHLNRIIS 734
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 735 QLKESASVSSAKRVN 749
>gi|73667768|ref|YP_303783.1| acetolactate synthase 3 regulatory subunit [Methanosarcina
barkeri str. Fusaro]
gi|72394930|gb|AAZ69203.1| acetolactate synthase, small subunit [Methanosarcina barkeri str.
Fusaro]
Length = 161
Score = 38.1 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLE 81
+ ++ + G++ V ++ G NI +G ++ + + + +DG +L V +
Sbjct: 3 HTLAVLVENRSGVLSRVASLFSRRGYNIESLAVGVTEDPKTSRMTIVVDGDDHVLEQVTK 62
Query: 82 KLSVNVTIRFV 92
+L+ V + V
Sbjct: 63 QLNKLVDVIKV 73
>gi|23501539|ref|NP_697666.1| RelA/SpoT family protein [Brucella suis 1330]
gi|254703986|ref|ZP_05165814.1| RelA/SpoT family protein [Brucella suis bv. 3 str. 686]
gi|260566767|ref|ZP_05837237.1| GTP pyrophosphokinase rsh [Brucella suis bv. 4 str. 40]
gi|261754639|ref|ZP_05998348.1| GTP pyrophosphokinase [Brucella suis bv. 3 str. 686]
gi|81741540|sp|Q8CY42|RSH_BRUSU RecName: Full=GTP pyrophosphokinase rsh; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase
gi|23347449|gb|AAN29581.1| RelA/SpoT family protein [Brucella suis 1330]
gi|260156285|gb|EEW91365.1| GTP pyrophosphokinase rsh [Brucella suis bv. 4 str. 40]
gi|261744392|gb|EEY32318.1| GTP pyrophosphokinase [Brucella suis bv. 3 str. 686]
Length = 750
Score = 38.1 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + + I NI + + R+ + + + D LN ++
Sbjct: 676 RISVSAINSPGSLAKIAQIAAANDANIHNLSMVRTAP-DFTEMIIDVEVWDLKHLNRIIS 734
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 735 QLKESASVSSAKRVN 749
>gi|299751779|ref|XP_001830478.2| acetolactate synthase [Coprinopsis cinerea okayama7#130]
gi|298409531|gb|EAU91358.2| acetolactate synthase [Coprinopsis cinerea okayama7#130]
Length = 330
Score = 38.1 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ ++ + + G++ V IL G NI + R++ + + + + G ++V
Sbjct: 91 PFKKHILNCLVQNEPGVLSRVSGILAGRGFNIDSLVVCRTEIRDLSRMCIVLSGQ--DAV 148
Query: 80 LEK 82
+E+
Sbjct: 149 IEQ 151
>gi|297624977|ref|YP_003706411.1| Prephenate dehydrogenase [Truepera radiovictrix DSM 17093]
gi|297166157|gb|ADI15868.1| Prephenate dehydrogenase [Truepera radiovictrix DSM 17093]
Length = 362
Score = 38.1 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFH-LGRSQSTEHAISFLC 70
R + I D G + + LGE G+NI L ++
Sbjct: 289 PARFEVVIAVPDRPGELARITRALGEAGVNIKDIEVLSIREAGGAVRLAFD 339
>gi|170781810|ref|YP_001710142.1| acetolactate synthase 3 regulatory subunit [Clavibacter
michiganensis subsp. sepedonicus]
gi|169156378|emb|CAQ01526.1| acetolactate synthase small subunit [Clavibacter michiganensis
subsp. sepedonicus]
Length = 169
Score = 38.1 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLE 81
++ ++ D G++ V + G NI +G S+ + + +D L V +
Sbjct: 3 HILSLLVEDKPGLLTRVAGLFARRGFNIESLAVGASEIEGLSRITVVVDVEALPLEQVTK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 63 QLNKLINVIKI 73
>gi|154284289|ref|XP_001542940.1| D-3-phosphoglycerate dehydrogenase 2 [Ajellomyces capsulatus NAm1]
gi|150411120|gb|EDN06508.1| D-3-phosphoglycerate dehydrogenase 2 [Ajellomyces capsulatus NAm1]
Length = 488
Score = 38.1 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 8/71 (11%), Positives = 24/71 (33%), Gaps = 7/71 (9%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ + ++ +I G++ V IL ++ ++ + A I + +
Sbjct: 396 EPNHGRVIFIHQNIPGVLRKVNEILSDHNVD----KQMTDSRGDVAYLMADISDVHTSDI 451
Query: 80 LE---KLSVNV 87
+ +L
Sbjct: 452 KDLYNRLENLP 462
>gi|213691311|ref|YP_002321897.1| acetolactate synthase, small subunit [Bifidobacterium longum
subsp. infantis ATCC 15697]
gi|213522772|gb|ACJ51519.1| acetolactate synthase, small subunit [Bifidobacterium longum
subsp. infantis ATCC 15697]
gi|320457378|dbj|BAJ67999.1| acetolactate synthase small subunit [Bifidobacterium longum
subsp. infantis ATCC 15697]
Length = 184
Score = 38.1 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSV 79
R + ++ + G++ + + NI + ++ + + + ++ L +
Sbjct: 12 QRHTLSVLVENRPGVLARIAGLFARRAFNINSLSVSPTERPDISRVTVTADVEAVPLEQI 71
Query: 80 LEKLSVNVTIRFV 92
+++L+ + + +
Sbjct: 72 IKQLNKLLHVLKI 84
>gi|212636279|ref|YP_002312804.1| PII uridylyl-transferase [Shewanella piezotolerans WP3]
gi|212557763|gb|ACJ30217.1| Protein-P-II uridylyltransferase [Shewanella piezotolerans WP3]
Length = 851
Score = 38.1 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 25/79 (31%), Gaps = 8/79 (10%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSV 79
G + I D + V IL IN+ A + + L DG
Sbjct: 672 GGTELFIYGKDKPKLFATVMAILDNKNINVHDATIMNSKDNYALDSFVILEQDGKP---- 727
Query: 80 LEKLSVNVTIRF--VKQFE 96
+ +LS I+ +K
Sbjct: 728 VSQLSRIQGIKKTLIKALS 746
>gi|116071107|ref|ZP_01468376.1| acetolactate synthase III small subunit [Synechococcus sp. BL107]
gi|116066512|gb|EAU72269.1| acetolactate synthase III small subunit [Synechococcus sp. BL107]
Length = 176
Score = 38.1 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G +++ + + D L + +
Sbjct: 3 HTLSVLVEDESGALSRIAGLFARRGFNIHSLAVGPAEADGQSRLTMVVEGDEQTLEQMTK 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLDKLVNVLQV 73
>gi|290957187|ref|YP_003488369.1| acetolactate synthase small subunit [Streptomyces scabiei 87.22]
gi|260646713|emb|CBG69810.1| acetolactate synthase small subunit [Streptomyces scabiei 87.22]
Length = 175
Score = 38.1 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA---ISFLCIDGSILN 77
+ + + ++ + GI+ + + G NI +G ++ E + I ++ L
Sbjct: 1 MSKHTLSVLVENTPGILARIAALFSRRGFNIDSLAVGVTEHPEISRITIVVTVVEELPLE 60
Query: 78 SVLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 QVTKQLNKLVNVLKIVELE 79
>gi|331001912|ref|ZP_08325433.1| acetolactate synthase [Lachnospiraceae oral taxon 107 str. F0167]
gi|330412235|gb|EGG91629.1| acetolactate synthase [Lachnospiraceae oral taxon 107 str. F0167]
Length = 165
Score = 38.1 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA-ISFLCI-DGSILNSVLEKLSVNVT 88
+ +G++ V + G NI +G++ + + ++ + I D L+ ++++L
Sbjct: 10 DNSVGVLSRVSGLFSRRGYNIDSLTVGQTSDPQFSRMTVVSIGDEDTLDQIVKQLRKLED 69
Query: 89 IRFVKQFE 96
++ +K E
Sbjct: 70 VKDIKVLE 77
>gi|322378379|ref|ZP_08052834.1| aspartate kinase [Helicobacter suis HS1]
gi|322380269|ref|ZP_08054489.1| aspartate kinase [Helicobacter suis HS5]
gi|321147306|gb|EFX41986.1| aspartate kinase [Helicobacter suis HS5]
gi|321149192|gb|EFX43637.1| aspartate kinase [Helicobacter suis HS1]
Length = 400
Score = 38.1 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 27 CIVNADILGIVVFVGNILGEYGINIAH--FHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ D GI + +L + INI +GR+ T+ + D VL+ L
Sbjct: 265 IVDARDYPGIAGEIFGLLADANINIDLIVQTVGRNGKTDINFTVPKEDLQTCKQVLKNLQ 324
Query: 85 VNVTI 89
++
Sbjct: 325 DIGSV 329
>gi|171741392|ref|ZP_02917199.1| hypothetical protein BIFDEN_00475 [Bifidobacterium dentium ATCC
27678]
gi|283455258|ref|YP_003359822.1| acetolactate synthase small subunit [Bifidobacterium dentium Bd1]
gi|306823680|ref|ZP_07457055.1| acetolactate synthase small subunit [Bifidobacterium dentium ATCC
27679]
gi|309802912|ref|ZP_07697013.1| acetolactate synthase, small subunit [Bifidobacterium dentium
JCVIHMP022]
gi|171277006|gb|EDT44667.1| hypothetical protein BIFDEN_00475 [Bifidobacterium dentium ATCC
27678]
gi|283101892|gb|ADB08998.1| ilvN Acetolactate synthase small subunit [Bifidobacterium dentium
Bd1]
gi|304553387|gb|EFM41299.1| acetolactate synthase small subunit [Bifidobacterium dentium ATCC
27679]
gi|308220379|gb|EFO76690.1| acetolactate synthase, small subunit [Bifidobacterium dentium
JCVIHMP022]
Length = 184
Score = 38.1 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 5/71 (7%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLE 81
+ ++ + G++ + + NI + ++ + + + ++ L +++
Sbjct: 14 HTLSVLVENRPGVLARIAGLFARRAFNINSLSVSPTERPDISRVTVTADVEEVPLEQIIK 73
Query: 82 KLSVNVTIRFV 92
+L+ + + +
Sbjct: 74 QLNKLLHVLKI 84
>gi|163842924|ref|YP_001627328.1| RelA/SpoT family protein [Brucella suis ATCC 23445]
gi|163673647|gb|ABY37758.1| RelA/SpoT family protein [Brucella suis ATCC 23445]
Length = 750
Score = 38.1 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + + I NI + + R+ + + + D LN ++
Sbjct: 676 RISVSAINSPGSLAKIAQIAAANDANIHNLSMVRTAP-DFTEMIIDVEVWDLKHLNRIIS 734
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 735 QLKESASVSSAKRVN 749
>gi|78057949|gb|ABB17340.1| acetolactate synthase [Microcoleus chthonoplastes IPPAS B-270]
Length = 172
Score = 38.1 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCIDGSILNSVLE 81
+ ++ D G++ + + G NI +G + + + + ++ +++
Sbjct: 3 HTLSVLVEDEAGVLTRIAALFARRGFNIESLAVGTGEQGDVSRVTMVVNGNDQVIEQIVK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 63 QLYKLINVLKVQDIT 77
>gi|148239942|ref|YP_001225329.1| homoserine dehydrogenase [Synechococcus sp. WH 7803]
gi|147848481|emb|CAK24032.1| Homoserine dehydrogenase [Synechococcus sp. WH 7803]
Length = 438
Score = 38.1 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVNVT 88
D G++ +G+ G+ ++I + I + + + L ++
Sbjct: 368 DDAPGVIGRIGSCFGDQQVSIQSIVQFDASDEGAEIVVITHEVSSGAMQKALSAITALPE 427
Query: 89 IR 90
+R
Sbjct: 428 VR 429
>gi|118587966|ref|ZP_01545376.1| GTP pyrophosphokinase [Stappia aggregata IAM 12614]
gi|118439588|gb|EAV46219.1| GTP pyrophosphokinase [Stappia aggregata IAM 12614]
Length = 748
Score = 38.1 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Query: 2 FSDGKPRFIKIQ-EINFDVDIGRL--MICIVNADILGIVVFVGNILGEYGINIAHFHLGR 58
F D R++ ++ +I+ + + R + I A+ G + + ++GE NI + + +
Sbjct: 649 FDDQTERWVDVRWDIDVN-NPERFPARLDISAANEPGSLATIAQVIGENSGNIDNVKMMQ 707
Query: 59 SQSTEHAISF-LCI-DGSILNSVLEKLSVNVTIRFVKQFE 96
S H + L + D LN ++ +L + V +
Sbjct: 708 RASDFHQMIIDLEVWDLKHLNRIINQLRSKPNVSSVSRVN 747
>gi|56697424|ref|YP_167792.1| acetolactate synthase 3 regulatory subunit [Ruegeria pomeroyi
DSS-3]
gi|56679161|gb|AAV95827.1| acetolactate synthase, small subunit [Ruegeria pomeroyi DSS-3]
Length = 186
Score = 38.1 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R I ++ + G++ V + G NI + T H +S + I + V+E
Sbjct: 27 ERHTIALLVENEPGVLARVIGLFSGRGYNIESLTVAEVDHTGH-LSRITIVTTGTPQVIE 85
Query: 82 KLSV-NVTIRFVKQFE 96
++ I V+
Sbjct: 86 QIKAQLGRIVSVRDVH 101
>gi|319441084|ref|ZP_07990240.1| homoserine dehydrogenase [Corynebacterium variabile DSM 44702]
Length = 440
Score = 38.1 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 7/66 (10%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-NSVLEKLSVNVTI 89
D G++ V + +G++I + + ++ L +
Sbjct: 369 QDRPGVLAEVASTFAAHGVSIKTVRQEENVDGARLVVITHHATEQALEETVDALMQLEAV 428
Query: 90 RFVKQF 95
+ V+
Sbjct: 429 KNVRSV 434
>gi|189463588|ref|ZP_03012373.1| hypothetical protein BACCOP_04312 [Bacteroides coprocola DSM
17136]
gi|189429691|gb|EDU98675.1| hypothetical protein BACCOP_04312 [Bacteroides coprocola DSM
17136]
Length = 185
Score = 38.1 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + +I G++ V + INI ++ S + I+ V+
Sbjct: 8 YTIIVHSENIAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITCWTTPDIVEKVVR 67
Query: 82 KLSVNVTIRFVKQFE 96
++ + + F
Sbjct: 68 QIEKKMDVIQAHYFT 82
>gi|117621333|ref|YP_855361.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117562740|gb|ABK39688.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 736
Score = 38.1 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 12 IQEINFDVDIGRLMICIVN--ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
I + + G + I D G++ + +L IN+ + + + +
Sbjct: 648 IDAVWGENYSGGYGLTIRILSNDRSGLLRDITTVLANEKINV--MGVRSRSNVREQTAEI 705
Query: 70 CIDGSIL-----NSVLEKLSVNVTIRFVKQF 95
++ I N L KLS + K+
Sbjct: 706 DMELEIYNINAFNRALAKLSQLNDVISAKRL 736
>gi|254488940|ref|ZP_05102145.1| homoserine dehydrogenase [Roseobacter sp. GAI101]
gi|214045809|gb|EEB86447.1| homoserine dehydrogenase [Roseobacter sp. GAI101]
Length = 460
Score = 38.1 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D G + + +LGE GI+I ++HA + + ++ E L+
Sbjct: 389 DKPGALAKIATVLGEAGISINRMR-QTEHRSDHAPVLIVTHKTSRKALDEALAAMSGT 445
>gi|27777551|gb|AAN10234.1| acetolactate synthetase small subunit [Streptomyces
viridifaciens]
Length = 174
Score = 38.1 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFH--LGRSQSTEHAISFLCIDGSILNS 78
+ + + ++ + GI+ + + G NI L + + + +L
Sbjct: 1 MAKHTLSVLVENTPGILARIAALFSRRGFNIDSLAEGLTEHPAIGRITIVVHAEDDLLEQ 60
Query: 79 VLEKLSVNVTIRFVKQFE 96
V+ ++S V + + + E
Sbjct: 61 VVRQVSKLVNVLRIVELE 78
>gi|284040744|ref|YP_003390674.1| acetolactate synthase, small subunit [Spirosoma linguale DSM 74]
gi|283820037|gb|ADB41875.1| acetolactate synthase, small subunit [Spirosoma linguale DSM 74]
Length = 177
Score = 38.1 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 24/72 (33%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
ICI + +G++ + I INI + ++ + + I V + +
Sbjct: 4 YTICIFTENTIGLLNRITIIFTRRRINIESLTVSETERKGVSRFTIVIKHESREEVEKLV 63
Query: 84 SVNVTIRFVKQF 95
I V
Sbjct: 64 RQIRKIVEVMAV 75
>gi|16125800|ref|NP_420364.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Caulobacter crescentus CB15]
gi|221234559|ref|YP_002516995.1| ppGpp hydrolase-synthetase relA/spoT [Caulobacter crescentus
NA1000]
gi|13422940|gb|AAK23532.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Caulobacter crescentus CB15]
gi|220963731|gb|ACL95087.1| ppGpp hydrolase-synthetase relA/spoT [Caulobacter crescentus
NA1000]
Length = 742
Score = 38.1 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 8/74 (10%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS----- 78
+ + G++ V I+GE G NI + + QS ID + ++
Sbjct: 667 TRLHATIQNAPGVLGLVCTIIGEAGGNIVNLRMHHRQSD---FFDTDIDVEVRDAKHLTN 723
Query: 79 VLEKLSVNVTIRFV 92
+ L ++ V
Sbjct: 724 IQAALRACPSVETV 737
>gi|295689092|ref|YP_003592785.1| Homoserine dehydrogenase [Caulobacter segnis ATCC 21756]
gi|295430995|gb|ADG10167.1| Homoserine dehydrogenase [Caulobacter segnis ATCC 21756]
Length = 429
Score = 38.1 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 24/62 (38%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + L E G++I F + L + + +L+ +S ++
Sbjct: 356 QDQPGVIAAISETLAECGVSIDSFLQKPIEGAGGVPIVLVTHATPESKLLDAISRIEKLQ 415
Query: 91 FV 92
V
Sbjct: 416 TV 417
>gi|257388693|ref|YP_003178466.1| acetolactate synthase small subunit [Halomicrobium mukohataei DSM
12286]
gi|257171000|gb|ACV48759.1| acetolactate synthase, small subunit [Halomicrobium mukohataei DSM
12286]
Length = 199
Score = 38.1 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Query: 33 ILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLEKLSVNVTIR 90
G++ V ++ NI +G + A + I+ ++L V
Sbjct: 49 EPGVLSEVSSLFSRRQFNIESLTVGPTHDDGVARMTIVIEEPQPGIEQAKKQLRKLVPTI 108
Query: 91 FVKQF 95
V +
Sbjct: 109 SVTEL 113
>gi|262201841|ref|YP_003273049.1| homoserine dehydrogenase [Gordonia bronchialis DSM 43247]
gi|262085188|gb|ACY21156.1| Homoserine dehydrogenase [Gordonia bronchialis DSM 43247]
Length = 448
Score = 38.1 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 5/83 (6%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D R I + AD G++ V + ++IA + + + + A + +
Sbjct: 360 PVDDVPTRYYISMRVADRPGVLAQVAGEFTKRSVSIAA--VRQEGAGDDARLIVVTHRAP 417
Query: 76 L---NSVLEKLSVNVTIRFVKQF 95
+ + L + V
Sbjct: 418 DRAQSECVAALEDMDAVIKVSSV 440
>gi|297571399|ref|YP_003697173.1| (p)ppGpp synthetase I, SpoT/RelA [Arcanobacterium haemolyticum DSM
20595]
gi|296931746|gb|ADH92554.1| (p)ppGpp synthetase I, SpoT/RelA [Arcanobacterium haemolyticum DSM
20595]
Length = 772
Score = 38.1 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
Query: 28 IVNADILGIVVFVGNILGEYGIN-IAHFHLGRSQSTEHAISFLCIDGSIL-NSVLEKLSV 85
I D G++ + L E+ +N I+ S+ + + VL +L
Sbjct: 679 IEALDRRGLLADISRALAEHDVNMISGTINTSSERVAKSSFTFEMADPHHLERVLRELRK 738
Query: 86 NVTIRFV 92
+
Sbjct: 739 IEGVYDA 745
>gi|296453543|ref|YP_003660686.1| acetolactate synthase small subunit [Bifidobacterium longum
subsp. longum JDM301]
gi|296182974|gb|ADG99855.1| acetolactate synthase, small subunit [Bifidobacterium longum
subsp. longum JDM301]
Length = 184
Score = 38.1 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSV 79
R + ++ + G++ + + NI + ++ + + + ++ L +
Sbjct: 12 QRHTLSVLVENRPGVLARIAGLFARRAFNINSLSVSPTERPDISRVTVTADVEAVPLEQI 71
Query: 80 LEKLSVNVTIRFV 92
+++L+ + + +
Sbjct: 72 IKQLNKLLHVLKI 84
>gi|257465282|ref|ZP_05629653.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus minor 202]
gi|257450942|gb|EEV24985.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus minor 202]
Length = 568
Score = 38.1 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 9/79 (11%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDG 73
+ D+++ + G++ + N + NI H ++ + + D
Sbjct: 494 DVDIELE-------IKNQPGVLASLTNTIAALNSNIGAVHSQPKENGNYQVKLQISVTDN 546
Query: 74 SILNSVLEKLSVNVTIRFV 92
+ L V+++L + V
Sbjct: 547 AHLYVVIQRLMKLNGVVKV 565
>gi|124026242|ref|YP_001015358.1| homoserine dehydrogenase [Prochlorococcus marinus str. NATL1A]
gi|123961310|gb|ABM76093.1| Homoserine dehydrogenase:ACT domain [Prochlorococcus marinus str.
NATL1A]
Length = 440
Score = 38.1 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLEKLSV 85
++ D G++ +G I G+ I+I ++ + I + I+ L L +
Sbjct: 367 LIAEDSPGVIGEIGTIFGKKKISIESIVQFDAKDKKAEIVVITHKINQGQLEEALLDIKN 426
Query: 86 NVTIRFV 92
++ +
Sbjct: 427 LPQVKRI 433
>gi|291007809|ref|ZP_06565782.1| homoserine dehydrogenase [Saccharopolyspora erythraea NRRL 2338]
Length = 434
Score = 38.1 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R I + AD G++ V E+ ++I+ + + + A + + ++
Sbjct: 350 TPTRYHISLDVADKPGVLSQVAATFNEHDVSIS--VVRQQGRGDEASLVVVTHTAADAAL 407
Query: 80 ---LEKLSVNVTIRFV 92
++K++ +R V
Sbjct: 408 KSTVDKIAQLEVVREV 423
>gi|49529517|emb|CAG67229.1| homoserine dehydrogenase [Acinetobacter sp. ADP1]
Length = 437
Score = 38.1 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
+ + D G++ + IL GI+I I L + S ++ L
Sbjct: 355 GYYLRVDAEDQTGVLADITTILSRAGISIDAIMQQSRLKDLIPIVILTDPVVESKMDEAL 414
Query: 81 EKLSVNVTIR 90
K+ I
Sbjct: 415 AKIQALPAIH 424
>gi|325297986|ref|YP_004257903.1| acetolactate synthase, small subunit [Bacteroides salanitronis
DSM 18170]
gi|324317539|gb|ADY35430.1| acetolactate synthase, small subunit [Bacteroides salanitronis
DSM 18170]
Length = 185
Score = 38.1 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + + G++ V + INI ++ S + I+ V+
Sbjct: 7 YTIIVHSENFAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITCWTTPDIVEKVVR 66
Query: 82 KLSVNVTIRFVKQFE 96
++ + + F
Sbjct: 67 QIEKKIDVIQAHYFT 81
>gi|260944620|ref|XP_002616608.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238850257|gb|EEQ39721.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 464
Score = 38.1 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI---SFLCIDGSILNSVLE 81
+ ++ ++ G++ V NIL + NI + A +D S + S+ E
Sbjct: 394 RVLYIHQNVPGVLKTVNNILSNH--NIEKQ--FTDSRGDVAYLMADISDVDHSDIKSLYE 449
Query: 82 KLSVNVTIRFVKQF 95
+L +
Sbjct: 450 QLEQTPYKIATRLL 463
>gi|228913484|ref|YP_045051.2| homoserine dehydrogenase [Acinetobacter sp. ADP1]
Length = 433
Score = 38.1 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
+ + D G++ + IL GI+I I L + S ++ L
Sbjct: 351 GYYLRVDAEDQTGVLADITTILSRAGISIDAIMQQSRLKDLIPIVILTDPVVESKMDEAL 410
Query: 81 EKLSVNVTIR 90
K+ I
Sbjct: 411 AKIQALPAIH 420
>gi|313672794|ref|YP_004050905.1| acetolactate synthase, small subunit [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939550|gb|ADR18742.1| acetolactate synthase, small subunit [Calditerrivibrio
nitroreducens DSM 19672]
Length = 174
Score = 38.1 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + G++ + + G NI + +++ + +I + D I+ +++
Sbjct: 3 HIISVLVENKFGVLARIAGLFSGRGYNIESLSVNATENEDISIMTIVTRGDDHIIEQIIK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L V V+
Sbjct: 63 QLRKLVNTIKVRDVT 77
>gi|295696324|ref|YP_003589562.1| Prephenate dehydrogenase [Bacillus tusciae DSM 2912]
gi|295411926|gb|ADG06418.1| Prephenate dehydrogenase [Bacillus tusciae DSM 2912]
Length = 372
Score = 38.1 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 24/59 (40%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D GI+ V +LGE GIN+ + + S+ E L D +L + +
Sbjct: 309 DQPGIIGTVATLLGEAGINLRNIAILESREDEDGQLSLTFDTEDGRDQAARLLADHGFK 367
>gi|146306766|ref|YP_001187231.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudomonas mendocina ymp]
gi|145574967|gb|ABP84499.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudomonas mendocina ymp]
Length = 747
Score = 38.1 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEK 82
I I D G++ V +L +N+ + ++ A + ++ L++ +L +
Sbjct: 672 IVIKAYDRSGLLRDVTQVLLNEKLNVLAVNTRSNKEDNTASMSITVEIPGLDALGRLLAR 731
Query: 83 LSVNVTIRFVK 93
+ I +
Sbjct: 732 IGQLPNIIEAR 742
>gi|118579771|ref|YP_901021.1| UTP-GlnB uridylyltransferase, GlnD [Pelobacter propionicus DSM
2379]
gi|118502481|gb|ABK98963.1| UTP-GlnB uridylyltransferase, GlnD [Pelobacter propionicus DSM
2379]
Length = 905
Score = 38.1 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 27 CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
+ D+ G+ + ++ GINI + + + L ++ + ++
Sbjct: 722 ICTH-DMPGLFSRITGVMAANGINILGAQI-NTSRNGKVLDILQVNSPRGKIIGDE 775
>gi|23464898|ref|NP_695501.1| acetolactate synthase 3 regulatory subunit [Bifidobacterium
longum NCC2705]
gi|46190763|ref|ZP_00206562.1| COG0440: Acetolactate synthase, small (regulatory) subunit
[Bifidobacterium longum DJO10A]
gi|189439906|ref|YP_001954987.1| acetolactate synthase 3 regulatory subunit [Bifidobacterium
longum DJO10A]
gi|227545815|ref|ZP_03975864.1| acetolactate synthase 3 regulatory subunit [Bifidobacterium
longum subsp. infantis ATCC 55813]
gi|312133322|ref|YP_004000661.1| ilvh [Bifidobacterium longum subsp. longum BBMN68]
gi|317482012|ref|ZP_07941037.1| acetolactate synthase [Bifidobacterium sp. 12_1_47BFAA]
gi|322688498|ref|YP_004208232.1| acetolactate synthase small subunit [Bifidobacterium longum
subsp. infantis 157F]
gi|322690508|ref|YP_004220078.1| acetolactate synthase small subunit [Bifidobacterium longum
subsp. longum JCM 1217]
gi|23325489|gb|AAN24137.1| acetolactate synthase small subunit [Bifidobacterium longum
NCC2705]
gi|189428341|gb|ACD98489.1| Acetolactate synthase small subunit [Bifidobacterium longum
DJO10A]
gi|227213931|gb|EEI81770.1| acetolactate synthase 3 regulatory subunit [Bifidobacterium
longum subsp. infantis ATCC 55813]
gi|291517393|emb|CBK71009.1| acetolactate synthase, small subunit [Bifidobacterium longum
subsp. longum F8]
gi|311772539|gb|ADQ02027.1| IlvH [Bifidobacterium longum subsp. longum BBMN68]
gi|316916579|gb|EFV37976.1| acetolactate synthase [Bifidobacterium sp. 12_1_47BFAA]
gi|320455364|dbj|BAJ65986.1| acetolactate synthase small subunit [Bifidobacterium longum
subsp. longum JCM 1217]
gi|320459834|dbj|BAJ70454.1| acetolactate synthase small subunit [Bifidobacterium longum
subsp. infantis 157F]
Length = 184
Score = 38.1 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSV 79
R + ++ + G++ + + NI + ++ + + + ++ L +
Sbjct: 12 QRHTLSVLVENRPGVLARIAGLFARRAFNINSLSVSPTERPDISRVTVTADVEAVPLEQI 71
Query: 80 LEKLSVNVTIRFV 92
+++L+ + + +
Sbjct: 72 IKQLNKLLHVLKI 84
>gi|302792282|ref|XP_002977907.1| hypothetical protein SELMODRAFT_107328 [Selaginella moellendorffii]
gi|300154610|gb|EFJ21245.1| hypothetical protein SELMODRAFT_107328 [Selaginella moellendorffii]
Length = 412
Score = 38.1 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 7/79 (8%)
Query: 19 VDIGR---LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---D 72
+ + +V D G++ V + G NI +G S+ + + D
Sbjct: 234 AEPNGYMSHTLSMVVNDAPGVLNRVTGVFARRGYNIQSLAVGLSERQGISRITTVVPGTD 293
Query: 73 GSILNSVLEKLSVNVTIRF 91
SI +L +LS + +
Sbjct: 294 ESIRK-LLHQLSKLIDVVQ 311
>gi|145300353|ref|YP_001143194.1| GTP pyrophosphokinase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142853125|gb|ABO91446.1| GTP pyrophosphokinase [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 739
Score = 38.1 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 12 IQEINFDVDIGRLMICIVN--ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
I + + G + I D G++ + +L IN+ + + + +
Sbjct: 651 IDAVWGENYSGGYGLTIRILSNDRSGLLRDITTVLANEKINV--MGVRSRSNVREQTAEI 708
Query: 70 CIDGSIL-----NSVLEKLSVNVTIRFVKQF 95
++ I N L KLS + K+
Sbjct: 709 DMELEIYNINAFNRALAKLSQLNDVISAKRL 739
>gi|90414593|ref|ZP_01222566.1| hypothetical protein P3TCK_14409 [Photobacterium profundum 3TCK]
gi|90324309|gb|EAS40878.1| hypothetical protein P3TCK_14409 [Photobacterium profundum 3TCK]
Length = 170
Score = 38.1 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 25/75 (33%), Gaps = 10/75 (13%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ--STEHAISF--------LC 70
+ + D GIV V +L + INI + + I
Sbjct: 84 PELHQLTVTGNDRPGIVKEVTTLLSQLNININKLKTETQSAPNWGYPIFIATFQLETPAN 143
Query: 71 IDGSILNSVLEKLSV 85
ID I+ LEKL+
Sbjct: 144 IDLDIIQDELEKLAD 158
>gi|16125632|ref|NP_420196.1| homoserine dehydrogenase [Caulobacter crescentus CB15]
gi|221234384|ref|YP_002516820.1| homoserine dehydrogenase [Caulobacter crescentus NA1000]
gi|13422738|gb|AAK23364.1| homoserine dehydrogenase [Caulobacter crescentus CB15]
gi|220963556|gb|ACL94912.1| homoserine dehydrogenase [Caulobacter crescentus NA1000]
Length = 429
Score = 38.1 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 25/62 (40%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + L E G++I F + L + +++L+ +S ++
Sbjct: 356 QDQPGVIAAISETLAECGVSIDSFLQKPVEGAGGVPIVLVTHATPESNLLDAISRIEKLQ 415
Query: 91 FV 92
V
Sbjct: 416 TV 417
>gi|330828387|ref|YP_004391339.1| GTP pyrophosphokinase [Aeromonas veronii B565]
gi|328803523|gb|AEB48722.1| GTP pyrophosphokinase [Aeromonas veronii B565]
Length = 737
Score = 37.7 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 12 IQEINFDVDIGRLMICIVN--ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
I + + G + I D G++ + +L IN+ + + + +
Sbjct: 649 IDAVWGENYSGGYGLTIRIISNDRSGLLRDITTVLANEKINV--MGVRSRSNVREQTAEI 706
Query: 70 CIDGSIL-----NSVLEKLSVNVTIRFVKQF 95
++ I N L KLS + K+
Sbjct: 707 DMELEIYNINAFNRALAKLSQLNDVISAKRL 737
>gi|296421302|ref|XP_002840204.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636418|emb|CAZ84395.1| unnamed protein product [Tuber melanosporum]
Length = 239
Score = 37.7 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 27/80 (33%), Gaps = 7/80 (8%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ + + ++++ G++ V +ILG++ ++ + A I
Sbjct: 163 AEENHVRVIFIHSNRPGVLRQVNSILGDHNVD----KQMSDSRGDVAYLMADISDVNAGD 218
Query: 79 VL---EKLSVNVTIRFVKQF 95
+ E L + +
Sbjct: 219 IRSLYESLEALSSKIMTRVL 238
>gi|148264232|ref|YP_001230938.1| homoserine dehydrogenase [Geobacter uraniireducens Rf4]
gi|146397732|gb|ABQ26365.1| homoserine dehydrogenase [Geobacter uraniireducens Rf4]
Length = 436
Score = 37.7 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 24/72 (33%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ I D G++ + LG I+I ++E + + V +
Sbjct: 352 SKYYIRFNAVDRPGVLAKISGALGASNISIESMMQTARSASETVPIVIMTHEAREMDVRK 411
Query: 82 KLSVNVTIRFVK 93
L+ F+K
Sbjct: 412 ALAEIDAFDFIK 423
>gi|86608450|ref|YP_477212.1| acetolactate synthase 3 regulatory subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556992|gb|ABD01949.1| acetolactate synthase, small subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 174
Score = 37.7 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ + D G++ + + G NI +G ++ + + + D + + +
Sbjct: 3 HTLSALVQDQPGVLTRIAGMFARRGFNIDSLTVGPTERPGISRITMVVQGDEHDVEQMTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V
Sbjct: 63 QLYKLIDVLKVTDIT 77
>gi|78213506|ref|YP_382285.1| acetolactate synthase 3 regulatory subunit [Synechococcus sp.
CC9605]
gi|78197965|gb|ABB35730.1| acetolactate synthase, small subunit [Synechococcus sp. CC9605]
Length = 176
Score = 37.7 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ +V D G + + + G NI +G +++ + + D L + +
Sbjct: 3 HTLSVVVEDESGALSRIAGLFARRGFNIDSLAVGPAEAEGQSRLTMVVEGDDQTLQQMTK 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLDKLVNVLQV 73
>gi|237815107|ref|ZP_04594105.1| RelA/SpoT family protein [Brucella abortus str. 2308 A]
gi|237789944|gb|EEP64154.1| RelA/SpoT family protein [Brucella abortus str. 2308 A]
Length = 760
Score = 37.7 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + + I NI + + R+ + + + D LN ++
Sbjct: 686 RISVSAINSPGSLAEIAQIAAANDANIHNLSMARTAP-DFTEMIIDVEVWDLKHLNRIIS 744
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 745 QLKESASVSSAKRVN 759
>gi|76801744|ref|YP_326752.1| acetolactate synthase small subunit [Natronomonas pharaonis DSM
2160]
gi|76557609|emb|CAI49191.1| acetolactate synthase, small subunit [Natronomonas pharaonis DSM
2160]
Length = 210
Score = 37.7 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Query: 10 IKIQ-EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
I+I E+ + + R +I + G++ V + NI +G +Q+ ++
Sbjct: 32 IRIDPEVAAEHEPRRTIISAYVKNEPGVLARVSGLFHRRQFNIESLTVGPTQNEGYSRIT 91
Query: 69 LCIDGSIL--NSVLEKLSVNVTIRFVKQF 95
L ++ + + ++L + + V++
Sbjct: 92 LVVEEPDPGIDQIKKQLQKVLPVVHVREL 120
>gi|328950476|ref|YP_004367811.1| acetolactate synthase, small subunit [Marinithermus
hydrothermalis DSM 14884]
gi|328450800|gb|AEB11701.1| acetolactate synthase, small subunit [Marinithermus
hydrothermalis DSM 14884]
Length = 175
Score = 37.7 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ ++ D ++ + + G NI +GR+ + + D + V +
Sbjct: 3 HIVSVLVEDHPRVLTRITALFARRGFNIESLAVGRTHQPGTSRIAFVVRGDDHTIEQVEK 62
Query: 82 KLSVNVTIRFV 92
+L+ V + V
Sbjct: 63 QLNRLVEVLKV 73
>gi|297559298|ref|YP_003678272.1| homoserine dehydrogenase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296843746|gb|ADH65766.1| Homoserine dehydrogenase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 428
Score = 37.7 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL----EKLSVNV 87
D G++ V I ++G++I + R + + + + ++ L E L V+
Sbjct: 356 DRPGVLSKVAEIFADHGVSIKNV---RQEGSGDDAQLVLVSHPAPDAALSATVEDLRVHD 412
Query: 88 TIRFV 92
+R V
Sbjct: 413 MVREV 417
>gi|229819903|ref|YP_002881429.1| acetolactate synthase, small subunit [Beutenbergia cavernae DSM
12333]
gi|229565816|gb|ACQ79667.1| acetolactate synthase, small subunit [Beutenbergia cavernae DSM
12333]
Length = 174
Score = 37.7 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID--GSILNSVLE 81
+ ++ + G++ V + NI +G ++ E + + +D L V +
Sbjct: 4 HTLSVLVENKPGVLTRVAALFARRAFNIHSLAVGPTEHAEISRITVVVDVAEHPLEQVTK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + + + E
Sbjct: 64 QLNKLVNVIKIVELE 78
>gi|85709672|ref|ZP_01040737.1| homoserine dehydrogenase [Erythrobacter sp. NAP1]
gi|85688382|gb|EAQ28386.1| homoserine dehydrogenase [Erythrobacter sp. NAP1]
Length = 441
Score = 37.7 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
D G++ + + + ++I GR + + +V E L++
Sbjct: 367 KDRPGVLAEITAAMRDADVSIESLIQQGREHGGGEVLVAMVTHEGPEANVTEALALLEG 425
>gi|302670706|ref|YP_003830666.1| RelA/SpoT family protein [Butyrivibrio proteoclasticus B316]
gi|302395179|gb|ADL34084.1| RelA/SpoT family protein [Butyrivibrio proteoclasticus B316]
Length = 760
Score = 37.7 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 9/73 (12%), Positives = 28/73 (38%), Gaps = 8/73 (10%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SV 79
I I + G++ + L E I+I + S+ ++ + + + +
Sbjct: 686 TIKIFANNRSGLLADISRTLSEKDIDIISMNTRTSKQG---LATMETSFQVSSRDQLREI 742
Query: 80 LEKLSVNVTIRFV 92
++K+ ++ +
Sbjct: 743 VDKIRQIDSVIDI 755
>gi|295401857|ref|ZP_06811821.1| formyltetrahydrofolate deformylase [Geobacillus
thermoglucosidasius C56-YS93]
gi|312111001|ref|YP_003989317.1| formyltetrahydrofolate deformylase [Geobacillus sp. Y4.1MC1]
gi|294976111|gb|EFG51725.1| formyltetrahydrofolate deformylase [Geobacillus
thermoglucosidasius C56-YS93]
gi|311216102|gb|ADP74706.1| formyltetrahydrofolate deformylase [Geobacillus sp. Y4.1MC1]
Length = 300
Score = 37.7 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I D GIV V + L E G NI + D + + +++
Sbjct: 21 RLLISCPDKPGIVAAVTSFLYEQGANIVESSQYSTDPEGGTFFLRIEFDCPNIAARKQEI 80
Query: 84 SV 85
Sbjct: 81 ES 82
>gi|322372079|ref|ZP_08046621.1| threonine dehydratase [Haladaptatus paucihalophilus DX253]
gi|320548501|gb|EFW90173.1| threonine dehydratase [Haladaptatus paucihalophilus DX253]
Length = 412
Score = 37.7 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST---EHAISFLCIDGSILNSVLE 81
+ + D G + V I+ ++G NI + RS A ++ S
Sbjct: 336 RLRVRIHDQPGEMQEVSGIIADHGANIRNVRHDRSAPELDVGEAYLVFQVETSGAGQARN 395
Query: 82 KLSVN 86
+
Sbjct: 396 IIRSI 400
>gi|319956608|ref|YP_004167871.1| (p)ppgpp synthetase i, spot/rela [Nitratifractor salsuginis DSM
16511]
gi|319419012|gb|ADV46122.1| (p)ppGpp synthetase I, SpoT/RelA [Nitratifractor salsuginis DSM
16511]
Length = 721
Score = 37.7 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
++GR + + + G++ + L + G+NI LG +S + ++ +
Sbjct: 637 NLGRYRLIVALQNQKGVLAKLLTKLSQIGLNIISIELGIHRSDSAEYCQIEVESEGPDK- 695
Query: 80 LEKLSVNVTIRFVKQFEF 97
++++ ++ R + E
Sbjct: 696 -KEIAQVIS-RQFRLVEI 711
>gi|284161556|ref|YP_003400179.1| amino acid-binding ACT domain protein [Archaeoglobus profundus
DSM 5631]
gi|284011553|gb|ADB57506.1| amino acid-binding ACT domain protein [Archaeoglobus profundus
DSM 5631]
Length = 219
Score = 37.7 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 28 IVNADILGIVVFVGNILGEYGINI---AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I+ + +G++ V ++ Y NI F L + A+ + ++G S+L+++
Sbjct: 7 IIAKNEIGVLRDVTTVIANYNGNITYSQTFILEDGEYKGKAMIYFEVEGGDFESMLKEIK 66
Query: 85 VNVTIRFVKQFE 96
T+ V++ +
Sbjct: 67 EIPTVLSVEEVK 78
>gi|300855726|ref|YP_003780710.1| prephenate dehydratase [Clostridium ljungdahlii DSM 13528]
gi|300435841|gb|ADK15608.1| prephenate dehydratase [Clostridium ljungdahlii DSM 13528]
Length = 276
Score = 37.7 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 6/61 (9%)
Query: 31 ADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGSILN-----SVLEKLS 84
+ G + + N E IN+ ++ F+ IDG V++K+S
Sbjct: 203 DNKPGALSKILNEFSEKNINLTSIMSRPTKKALGKYYFFIDIDGHYPEEKSVKEVIDKIS 262
Query: 85 V 85
Sbjct: 263 K 263
>gi|298245986|ref|ZP_06969792.1| (p)ppGpp synthetase I, SpoT/RelA [Ktedonobacter racemifer DSM
44963]
gi|297553467|gb|EFH87332.1| (p)ppGpp synthetase I, SpoT/RelA [Ktedonobacter racemifer DSM
44963]
Length = 792
Score = 37.7 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 21 IGRLM-ICIVNADILGIVVFVGNILGEYGINIAHF--HLGRSQSTEHAISFLCIDGSILN 77
+ I I D G++ + I+ EYG+N+ + + + D I+
Sbjct: 704 PRYHVPIIIFARDRAGLIRDIATIISEYGLNLLSIGTNANNRERIVITATLEINDLEIMP 763
Query: 78 SVLEKLSVNVTIRFV 92
+ ++L I V
Sbjct: 764 RLFKRLEKVKDILQV 778
>gi|114562446|ref|YP_749959.1| PII uridylyl-transferase [Shewanella frigidimarina NCIMB 400]
gi|114333739|gb|ABI71121.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella frigidimarina NCIMB
400]
Length = 857
Score = 37.7 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 6/73 (8%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSV 79
G + + + D + V +L IN+ A+ + L DG
Sbjct: 674 GGTELFVYSKDKPKLFATVMTVLDNKNINVHDANIMTSKDNYALDTFVILEQDGEP---- 729
Query: 80 LEKLSVNVTIRFV 92
+ +LS +IR
Sbjct: 730 IIQLSRIQSIRKA 742
>gi|284992454|ref|YP_003411008.1| acetolactate synthase small subunit [Geodermatophilus obscurus
DSM 43160]
gi|284065699|gb|ADB76637.1| acetolactate synthase, small subunit [Geodermatophilus obscurus
DSM 43160]
Length = 175
Score = 37.7 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 9/74 (12%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNS 78
+ R + ++ + G++ V + NI +G +++ + + + +D L
Sbjct: 1 MSRHTLSVLVENKSGVLARVSALFSRRAFNIESLAVGPTENPDLSRMTIVVDAESQPLEQ 60
Query: 79 VLEKLSVNVTIRFV 92
+ ++L+ + + +
Sbjct: 61 ITKQLNKLIEVIKI 74
>gi|239622486|ref|ZP_04665517.1| acetolactate synthase small subunit [Bifidobacterium longum
subsp. infantis CCUG 52486]
gi|239514483|gb|EEQ54350.1| acetolactate synthase small subunit [Bifidobacterium longum
subsp. infantis CCUG 52486]
Length = 184
Score = 37.7 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSV 79
R + ++ + G++ + + NI + ++ + + + ++ L +
Sbjct: 12 QRHTLSVLVENRPGVLARIAGLFARRAFNINSLSVSPTERPDISRVTVTADVEAVPLEQI 71
Query: 80 LEKLSVNVTIRFV 92
+++L+ + + +
Sbjct: 72 IKQLNKLLHVLKI 84
>gi|219849404|ref|YP_002463837.1| (p)ppGpp synthetase I SpoT/RelA [Chloroflexus aggregans DSM 9485]
gi|219543663|gb|ACL25401.1| (p)ppGpp synthetase I, SpoT/RelA [Chloroflexus aggregans DSM 9485]
Length = 789
Score = 37.7 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLG-RSQSTEHAISFLCIDGSILN--SVLEK 82
+ I D +G+ + N++ E GINI + G R + ++ S+ ++EK
Sbjct: 716 LRIEAWDRVGLWRDISNVIAEAGINITDVNHGKRRANGRTVLNVTVALQSMTQLSPLIEK 775
Query: 83 LSVNVTIRFV 92
L+ + V
Sbjct: 776 LNRIPDVIDV 785
>gi|297202556|ref|ZP_06919953.1| acetolactate synthase, small subunit [Streptomyces sviceus ATCC
29083]
gi|197709917|gb|EDY53951.1| acetolactate synthase, small subunit [Streptomyces sviceus ATCC
29083]
Length = 175
Score = 37.7 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILN 77
+ + + ++ + GI+ + + G NI +G ++ E + + + + L
Sbjct: 1 MSKHTLSVLVENTPGILARIAALFSRRGFNIDSLAVGVTEHPEISRITIVVTVLEELPLE 60
Query: 78 SVLEKLSVNVTIRFVKQFE 96
V ++L+ V + + + E
Sbjct: 61 QVTKQLNKLVNVLKIVELE 79
>gi|167772870|ref|ZP_02444923.1| hypothetical protein ANACOL_04258 [Anaerotruncus colihominis DSM
17241]
gi|167664803|gb|EDS08933.1| hypothetical protein ANACOL_04258 [Anaerotruncus colihominis DSM
17241]
Length = 143
Score = 37.7 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 24/76 (31%), Gaps = 5/76 (6%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL----NSV 79
+ + D G++ + + L G NI + A+ + + + +
Sbjct: 69 TTLYLTLEDRPGVLSLLLSELYRAGANIITVN-QNIPVDGVALVSVSVRTGASSRSRSEI 127
Query: 80 LEKLSVNVTIRFVKQF 95
L+ L + K
Sbjct: 128 LDMLGALDGVVEAKAI 143
>gi|196001599|ref|XP_002110667.1| hypothetical protein TRIADDRAFT_37449 [Trichoplax adhaerens]
gi|190586618|gb|EDV26671.1| hypothetical protein TRIADDRAFT_37449 [Trichoplax adhaerens]
Length = 520
Score = 37.7 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 26/100 (26%), Gaps = 11/100 (11%)
Query: 1 VFSDG-----KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFH 55
VF P F ++ I ++ G + E+G I+ +
Sbjct: 427 VFGGTVIGNFSPVFTELDGKQLHSPINATGNIVIGQGPAGSAPKFMVTMAEHG--ISTYA 484
Query: 56 LGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
I L + + V K+ ++
Sbjct: 485 CS----GSDGIGMLDVSAVVPEEVFNKIRSLPDVKSADML 520
>gi|308234771|ref|ZP_07665508.1| GTP diphosphokinase [Gardnerella vaginalis ATCC 14018]
Length = 439
Score = 37.7 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + +F D LN++L + +
Sbjct: 357 DRQHLLSDVTRVLSDHGVNILSGTIATGDDRVATSQFTFEMADPQHLNTLLAAIRKIDGV 416
Query: 90 RFV 92
V
Sbjct: 417 FDV 419
>gi|297618309|ref|YP_003703468.1| acetolactate synthase, small subunit [Syntrophothermus
lipocalidus DSM 12680]
gi|297146146|gb|ADI02903.1| acetolactate synthase, small subunit [Syntrophothermus
lipocalidus DSM 12680]
Length = 160
Score = 37.7 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ +V + G++ V + G NI +GR+++ + + + D ++ V +
Sbjct: 4 HTLSVVVENHPGVLARVATLFRRRGYNIDSLAVGRTENPAVSRMTIVVEGDDVVIEQVTK 63
Query: 82 KLSVNVTIRFV 92
+L V +
Sbjct: 64 QLHKLVETIKI 74
>gi|260435176|ref|ZP_05789146.1| acetolactate synthase, small subunit [Synechococcus sp. WH 8109]
gi|260413050|gb|EEX06346.1| acetolactate synthase, small subunit [Synechococcus sp. WH 8109]
Length = 176
Score = 37.7 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ +V D G + + + G NI +G +++ + + D L + +
Sbjct: 3 HTLSVVVEDESGALSRIAGLFARRGFNIDSLAVGPAEAEGQSRLTMVVEGDEQTLQQMTK 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLDKLVNVLQV 73
>gi|187250700|ref|YP_001875182.1| homoserine dehydrogenase [Elusimicrobium minutum Pei191]
gi|186970860|gb|ACC97845.1| Homoserine dehydrogenase [Elusimicrobium minutum Pei191]
Length = 441
Score = 37.7 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHF 54
++ I D G++ VG +G+ G+NI +
Sbjct: 359 PASYLLIIKTKDNPGVIGTVGTAIGDVGVNIENI 392
>gi|62289612|ref|YP_221405.1| RelA/SpoT family protein [Brucella abortus bv. 1 str. 9-941]
gi|82699540|ref|YP_414114.1| amino acid-binding ACT domain-containing protein [Brucella
melitensis biovar Abortus 2308]
gi|254688928|ref|ZP_05152182.1| amino acid-binding ACT domain-containing protein [Brucella abortus
bv. 6 str. 870]
gi|254693410|ref|ZP_05155238.1| amino acid-binding ACT domain-containing protein [Brucella abortus
bv. 3 str. Tulya]
gi|254697062|ref|ZP_05158890.1| amino acid-binding ACT domain-containing protein [Brucella abortus
bv. 2 str. 86/8/59]
gi|254729959|ref|ZP_05188537.1| amino acid-binding ACT domain-containing protein [Brucella abortus
bv. 4 str. 292]
gi|256257176|ref|ZP_05462712.1| amino acid-binding ACT domain-containing protein [Brucella abortus
bv. 9 str. C68]
gi|260545632|ref|ZP_05821373.1| GTP pyrophosphokinase rsh [Brucella abortus NCTC 8038]
gi|260754415|ref|ZP_05866763.1| GTP pyrophosphokinase [Brucella abortus bv. 6 str. 870]
gi|260757634|ref|ZP_05869982.1| GTP pyrophosphokinase [Brucella abortus bv. 4 str. 292]
gi|260761461|ref|ZP_05873804.1| GTP pyrophosphokinase [Brucella abortus bv. 2 str. 86/8/59]
gi|260883443|ref|ZP_05895057.1| GTP pyrophosphokinase [Brucella abortus bv. 9 str. C68]
gi|261213661|ref|ZP_05927942.1| GTP pyrophosphokinase [Brucella abortus bv. 3 str. Tulya]
gi|297248024|ref|ZP_06931742.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 5 str. B3196]
gi|75497087|sp|Q57E90|RSH_BRUAB RecName: Full=GTP pyrophosphokinase rsh; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase
gi|123768435|sp|Q2YN11|RSH_BRUA2 RecName: Full=GTP pyrophosphokinase rsh; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase
gi|62195744|gb|AAX74044.1| RelA/SpoT family protein [Brucella abortus bv. 1 str. 9-941]
gi|82615641|emb|CAJ10628.1| Amino acid-binding ACT:Metal dependent phosphohydrolase, HD
region:TGS domain:RelA/SpoT protein:Metal-dependent
phosphohydrol [Brucella melitensis biovar Abortus 2308]
gi|260097039|gb|EEW80914.1| GTP pyrophosphokinase rsh [Brucella abortus NCTC 8038]
gi|260667952|gb|EEX54892.1| GTP pyrophosphokinase [Brucella abortus bv. 4 str. 292]
gi|260671893|gb|EEX58714.1| GTP pyrophosphokinase [Brucella abortus bv. 2 str. 86/8/59]
gi|260674523|gb|EEX61344.1| GTP pyrophosphokinase [Brucella abortus bv. 6 str. 870]
gi|260872971|gb|EEX80040.1| GTP pyrophosphokinase [Brucella abortus bv. 9 str. C68]
gi|260915268|gb|EEX82129.1| GTP pyrophosphokinase [Brucella abortus bv. 3 str. Tulya]
gi|297175193|gb|EFH34540.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 5 str. B3196]
Length = 750
Score = 37.7 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + + I NI + + R+ + + + D LN ++
Sbjct: 676 RISVSAINSPGSLAEIAQIAAANDANIHNLSMARTAP-DFTEMIIDVEVWDLKHLNRIIS 734
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 735 QLKESASVSSAKRVN 749
>gi|224095442|ref|XP_002310395.1| predicted protein [Populus trichocarpa]
gi|222853298|gb|EEE90845.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 37.7 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE---HAISFLCIDGSI 75
+ + ++ D G++ V + G NI +G +++ D SI
Sbjct: 220 AGLQSHTLSLLVNDHPGVLNIVTGVFARRGYNIQSLAVGHAETEGLSRITTVVPGTDESI 279
Query: 76 LNSVLEKLSVNVTIRFVKQFE 96
++++L V I V+
Sbjct: 280 TK-LVQQLYKLVEIHEVRDLT 299
>gi|323697575|ref|ZP_08109487.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. ND132]
gi|323457507|gb|EGB13372.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio desulfuricans
ND132]
Length = 737
Score = 37.7 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 20/66 (30%), Gaps = 5/66 (7%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQST----EHAISFLCIDGSILNSV-LEKLSVN 86
+ G++ + ++L + +NI + +D ++KL
Sbjct: 671 NKPGMLGRICSMLADLDVNIDSGEFESKVDGTTLLNFTVEVKDLDQLYSALAEVKKLKAV 730
Query: 87 VTIRFV 92
V
Sbjct: 731 KEAIRV 736
>gi|317969148|ref|ZP_07970538.1| acetolactate synthase 3 regulatory subunit [Synechococcus sp.
CB0205]
Length = 176
Score = 37.7 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
+ ++ D G + + + G NI +G ++ H+ + +DG + +
Sbjct: 3 HTLSVLVEDESGALSRIAGLFARRGFNIESLAVGPAEKRGHSRLTMVVDGDAQTLEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L V + V
Sbjct: 63 QLDKLVNVLAVTDLT 77
>gi|320108632|ref|YP_004184222.1| homoserine dehydrogenase [Terriglobus saanensis SP1PR4]
gi|319927153|gb|ADV84228.1| homoserine dehydrogenase [Terriglobus saanensis SP1PR4]
Length = 449
Score = 37.7 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 21/55 (38%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVN 86
D GIV + LG+ GINI + + + + +++ + L
Sbjct: 371 DEPGIVGAITGALGKVGINIDSILQRPGYPKDCLPFVITTEACLTSTIEKALRAI 425
>gi|291529831|emb|CBK95416.1| acetolactate synthase, small subunit [Eubacterium siraeum 70/3]
Length = 157
Score = 37.7 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSV 79
R +I + + +G++ V + G NI ++ +++ + + D ++
Sbjct: 3 ERNVISVCVNNGIGVLGRVTGLFSRRGYNIISLNVAETENLGISRMTIVADGDEGVMEQQ 62
Query: 80 LEKLSVNVTIRFVKQFE 96
+++L + VK
Sbjct: 63 VKQLRKLYDVSEVKVLH 79
>gi|167751028|ref|ZP_02423155.1| hypothetical protein EUBSIR_02013 [Eubacterium siraeum DSM 15702]
gi|167655946|gb|EDS00076.1| hypothetical protein EUBSIR_02013 [Eubacterium siraeum DSM 15702]
gi|291530136|emb|CBK95721.1| acetolactate synthase, small subunit [Eubacterium siraeum 70/3]
gi|291556922|emb|CBL34039.1| acetolactate synthase, small subunit [Eubacterium siraeum
V10Sc8a]
Length = 163
Score = 37.7 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI--LNSVLE 81
I I+ + G++ V + G NI +G ++ + + + DG+ L + +
Sbjct: 3 HTISILVENHAGVLARVAGLFARRGFNIDSLAVGVTEDEKISRITIIADGTAYTLEQIEK 62
Query: 82 KLSVNVTIRFVKQF 95
+L+ + + V+
Sbjct: 63 QLNKLIDVIKVRHL 76
>gi|33240600|ref|NP_875542.1| homoserine dehydrogenase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|33238128|gb|AAQ00195.1| Homoserine dehydrogenase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 439
Score = 37.7 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 26/73 (35%), Gaps = 4/73 (5%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSV 79
+ + V D G++ +GN+ G+ ++I S I + + +
Sbjct: 362 NYVRLITV--DTPGVIGKIGNVFGKNNVSIQSIVQFDSSHAGAEIIVITHKVSKGQIEDS 419
Query: 80 LEKLSVNVTIRFV 92
L ++ + +
Sbjct: 420 LSEIEHLEEVIQI 432
>gi|262089690|gb|ACY24785.1| homoserine dehydrogenase [uncultured organism]
Length = 434
Score = 37.7 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI-LNSVLEKLS 84
+ + D G++ + IL + GI+I + E + + + + + +
Sbjct: 354 LRMSAQDKPGVLSKIATILSDSGISIEAMIQKEPREGESNVPLILLTNQVQDKKLTAAIR 413
Query: 85 VNVT 88
Sbjct: 414 SIEA 417
>gi|258514200|ref|YP_003190422.1| Prephenate dehydratase [Desulfotomaculum acetoxidans DSM 771]
gi|257777905|gb|ACV61799.1| Prephenate dehydratase [Desulfotomaculum acetoxidans DSM 771]
Length = 386
Score = 37.7 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 33/97 (34%), Gaps = 6/97 (6%)
Query: 2 FSDGKPRFIKIQEINFDVDIG-RLMICIVNADILGIVVFVGNILGEYGINIAHFHLG-RS 59
+S+ + RF+ + + D + + + + G + V GIN+
Sbjct: 181 YSNNETRFVLLSRFDSDCFWDCKTSLLVYVLNQPGALSRVLGEFSLRGINLTKIESRPTR 240
Query: 60 QSTEHAISFLCIDG----SILNSVLEKLSVNVTIRFV 92
+ F+ I+G + LE++ V
Sbjct: 241 KKIGEYFFFIDIEGHRLEPKVKEALEEIRTVAQAVRV 277
>gi|189023866|ref|YP_001934634.1| RelA/SpoT family protein [Brucella abortus S19]
gi|189019438|gb|ACD72160.1| RelA/SpoT family protein [Brucella abortus S19]
Length = 720
Score = 37.7 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + + I NI + + R+ + + + D LN ++
Sbjct: 646 RISVSAINSPGSLAEIAQIAAANDANIHNLSMARTAP-DFTEMIIDVEVWDLKHLNRIIS 704
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 705 QLKESASVSSAKRVN 719
>gi|304407528|ref|ZP_07389180.1| Prephenate dehydratase [Paenibacillus curdlanolyticus YK9]
gi|304343479|gb|EFM09321.1| Prephenate dehydratase [Paenibacillus curdlanolyticus YK9]
Length = 294
Score = 37.7 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 4/77 (5%)
Query: 22 GRLMICIVN-ADILGIVVFVGNILGEYGINIAHFHLG-RSQSTEHAISFLCIDGSILNSV 79
+ I + + D G + V + IN++ + + ID S+ +
Sbjct: 202 QKTTIIVSHPEDYPGGLHQVLSAFAWRRINLSRIESRPTKKRLGTYYFMIDIDKSLDTIL 261
Query: 80 LE-KLSVNVTI-RFVKQ 94
L+ ++ I V+
Sbjct: 262 LQSAIAEIEAIGFQVRV 278
>gi|254392673|ref|ZP_05007848.1| acetohydroxy acid synthase small subunit [Streptomyces
clavuligerus ATCC 27064]
gi|294815268|ref|ZP_06773911.1| Acetohydroxy acid synthase small subunit [Streptomyces
clavuligerus ATCC 27064]
gi|326443623|ref|ZP_08218357.1| acetolactate synthase 3 regulatory subunit [Streptomyces
clavuligerus ATCC 27064]
gi|197706335|gb|EDY52147.1| acetohydroxy acid synthase small subunit [Streptomyces
clavuligerus ATCC 27064]
gi|294327867|gb|EFG09510.1| Acetohydroxy acid synthase small subunit [Streptomyces
clavuligerus ATCC 27064]
Length = 175
Score = 37.7 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ + GI+ + + G NI +G ++ + + + + L V +
Sbjct: 5 HTLSVLVENTPGILARIAALFSRRGFNIDSLAVGVTEHPDISRITIVVNVADLPLEQVTK 64
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + + + E
Sbjct: 65 QLNKLVNVLKIVELE 79
>gi|192358857|ref|YP_001981928.1| homoserine dehydrogenase [Cellvibrio japonicus Ueda107]
gi|190685022|gb|ACE82700.1| homoserine dehydrogenase [Cellvibrio japonicus Ueda107]
Length = 435
Score = 37.7 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 31/91 (34%), Gaps = 10/91 (10%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G++ V IL +YGI+I ++ E + + + +
Sbjct: 345 PIDEVETAYYLRMSAVDKPGVLSKVATILSDYGISIEAMIQKEAKEGESDVPLILLTNRV 404
Query: 76 LN----SVLEKLSVNVTI------RFVKQFE 96
+ ++ +I V+ +
Sbjct: 405 QEKRLRDAISRIESLDSINAPVVRIRVEALK 435
>gi|330504040|ref|YP_004380909.1| (p)ppGpp synthetase I [Pseudomonas mendocina NK-01]
gi|328918326|gb|AEB59157.1| (p)ppGpp synthetase I [Pseudomonas mendocina NK-01]
Length = 747
Score = 37.7 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEK 82
I I D G++ V +L +N+ + ++ A + ++ L++ +L +
Sbjct: 672 IVIKAYDRSGLLRDVTQVLLNEKLNVLAVNTRSNKEDNTASMSITVEIPGLDALGRLLAR 731
Query: 83 LSVNVTIRFVK 93
+ I +
Sbjct: 732 IGQLPNIIEAR 742
>gi|328767718|gb|EGF77767.1| hypothetical protein BATDEDRAFT_91435 [Batrachochytrium
dendrobatidis JAM81]
Length = 311
Score = 37.7 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
+ G I ++ ++ G++ + +IL Y N+ L S + I+ + D +
Sbjct: 237 PLKPGSRRIICMHRNVRGVLKEIDHILSAY--NVGKQVLDTKDSLGYLIADVMTDQ-LST 293
Query: 78 SVLEKLSVNVTIRFVKQF 95
++ +L++ +
Sbjct: 294 EIVSQLAMLANTVRTRIV 311
>gi|319787317|ref|YP_004146792.1| chorismate mutase [Pseudoxanthomonas suwonensis 11-1]
gi|317465829|gb|ADV27561.1| chorismate mutase [Pseudoxanthomonas suwonensis 11-1]
Length = 392
Score = 37.7 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 8/84 (9%)
Query: 19 VDIGRL---MICIVNADILGIVVFVGNILGEYGINIAHFHL--GRSQSTEHAISFLCIDG 73
I + D G + V + +GI++ E+A + + G
Sbjct: 302 FPPSGHDRTSILVFIHDKPGALFDVLSPFARHGISMNRIESRPSHQAKWEYAFF-IDLAG 360
Query: 74 SILNSVLE-KLSVNV-TIRFVKQF 95
+ + ++ L+ + VK
Sbjct: 361 HVEDEAMKQALADLEQHVAKVKVL 384
>gi|154150251|ref|YP_001403869.1| amino acid-binding ACT domain-containing protein [Candidatus
Methanoregula boonei 6A8]
gi|153998803|gb|ABS55226.1| amino acid-binding ACT domain protein [Methanoregula boonei 6A8]
Length = 144
Score = 37.7 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 7/77 (9%)
Query: 14 EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG 73
N +I + D G + + ILG+ GINI + + + A+ L +D
Sbjct: 68 GFNVAFT---EVIAVQMKDQPGGLYEIAKILGDAGINIEYSYAY--SGKKAAVLILRVDQ 122
Query: 74 SILNSVLEKLSVNVTIR 90
++K+ +
Sbjct: 123 V--EEAIDKVLASGATL 137
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
I I + + G + V + LGE INI F + +++ + +D EKLS
Sbjct: 11 ISIFSENRPGRLASVAHALGEEKINILAFSIA--EASGFGVIRALVDH--PEKAFEKLSS 66
Query: 86 N 86
Sbjct: 67 L 67
>gi|39973499|ref|XP_368140.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
gi|16565968|gb|AAL26320.1| acetolactate synthase small-subunit precursor-like protein
[Magnaporthe grisea]
gi|145017931|gb|EDK02210.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
Length = 316
Score = 37.7 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
R ++ + + G++ V IL G NI + ++ + + + + ++
Sbjct: 77 APPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCSTEVADLSRMTIVLTGQDGVV 136
Query: 77 NSVLEKLSVN 86
+L
Sbjct: 137 EQARRQLEDL 146
>gi|295094222|emb|CBK83313.1| (p)ppGpp synthetase, RelA/SpoT family [Coprococcus sp. ART55/1]
Length = 814
Score = 37.7 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLS 84
I D GI+ + IL E IN+ + R+ A + LN+++ K+
Sbjct: 743 IYADDRNGILFDITKILSEANINVNSIN-SRTSKQGKATITISFAIKSKEQLNTIIAKIR 801
Query: 85 VNVTIRFV 92
I +
Sbjct: 802 NVDNIIDI 809
>gi|289178859|gb|ADC86105.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis
BB-12]
Length = 779
Score = 37.7 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LN++L + +
Sbjct: 695 DRPHLLSDVTRVLSDHGVNILSGTIATGSDRVATSQFSFEMADPGHLNTLLSAVRKIDGV 754
Query: 90 RFV 92
V
Sbjct: 755 FDV 757
>gi|255533880|ref|YP_003094252.1| formyltetrahydrofolate deformylase [Pedobacter heparinus DSM
2366]
gi|255346864|gb|ACU06190.1| formyltetrahydrofolate deformylase [Pedobacter heparinus DSM
2366]
Length = 274
Score = 37.7 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 7/77 (9%)
Query: 25 MICIVN-ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL--E 81
MI I+ D +G+V + IL +NI ++ L +DG + + VL
Sbjct: 1 MIIIIQCRDQVGLVADISGILAAAQLNIISMREHVDKAENRFFMRLEVDG-VSDEVLLEA 59
Query: 82 KLSVN---VTIRFVKQF 95
++ + V
Sbjct: 60 QMRQVLPSGAVIQVNPV 76
>gi|212702627|ref|ZP_03310755.1| hypothetical protein DESPIG_00655 [Desulfovibrio piger ATCC
29098]
gi|212673899|gb|EEB34382.1| hypothetical protein DESPIG_00655 [Desulfovibrio piger ATCC
29098]
Length = 145
Score = 37.7 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
+ G + V + L E G+NI L + + D SVL++
Sbjct: 11 ENRAGRLAEVTHTLAEAGVNIRALSLADTSDFGILRLIVD-DQEKAKSVLKE 61
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
D G + V + ++GIN+ + + ++ + AI D + ++ L
Sbjct: 78 DTPGGLDSVLQFVSQHGINVEYMYAFITREADCAIMIFRFDK--TDQAVDLLKA 129
>gi|302419151|ref|XP_003007406.1| acetolactate synthase small subunit [Verticillium albo-atrum
VaMs.102]
gi|261353057|gb|EEY15485.1| acetolactate synthase small subunit [Verticillium albo-atrum
VaMs.102]
Length = 314
Score = 37.7 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
R ++ + + G++ V IL G NI + ++ + + + + ++
Sbjct: 78 APPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCSTEVEDLSRMTIVLTGQDGVV 137
Query: 77 NSVLEKLSVN 86
+L
Sbjct: 138 EQARRQLEDL 147
>gi|310816882|ref|YP_003964846.1| Homoserine dehydrogenase [Ketogulonicigenium vulgare Y25]
gi|308755617|gb|ADO43546.1| Homoserine dehydrogenase [Ketogulonicigenium vulgare Y25]
Length = 428
Score = 37.7 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
I + D G + V ILG+ GI+I A + ++ ++
Sbjct: 344 AVPAPYYIRMQLDDKPGALAKVARILGDNGISIDRMRQY-GHDGSAAPVLIVTHKTMRSA 402
Query: 79 VLEKLSVNVTIRFV 92
V L V
Sbjct: 403 VELALEALPQTAVV 416
>gi|242050216|ref|XP_002462852.1| hypothetical protein SORBIDRAFT_02g033100 [Sorghum bicolor]
gi|241926229|gb|EER99373.1| hypothetical protein SORBIDRAFT_02g033100 [Sorghum bicolor]
Length = 532
Score = 37.7 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 5/73 (6%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG-SILNSVLE- 81
I D ++ + ++LGE G+NI H + +++ +DG +L
Sbjct: 143 HEIIFACDDKPKLLSQLTSLLGELGLNIQEAHAYSTSDG-YSLDIFVVDGWKYEADILRS 201
Query: 82 KLSVNVTIRFVKQ 94
L + +K
Sbjct: 202 ALR--EGVDKIKY 212
>gi|302833790|ref|XP_002948458.1| hypothetical protein VOLCADRAFT_73781 [Volvox carteri f.
nagariensis]
gi|300266145|gb|EFJ50333.1| hypothetical protein VOLCADRAFT_73781 [Volvox carteri f.
nagariensis]
Length = 486
Score = 37.7 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ +I I AD G++ V + G NI +G + + + + ++++
Sbjct: 77 EKHIISIFVADEPGLINRVAGVFARRGANIESLAVGLTVDKALFTVVVAGKAATVANLIK 136
Query: 82 KLSVNVTIRFVKQFE 96
+LS V+ E
Sbjct: 137 QLSKL---VKVRYVE 148
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 20/56 (35%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI 71
D + I D+ G++ V + G N+ +G S+ + + +
Sbjct: 301 EVPSDFKSYTLNIEVQDVPGVLNQVTQVFARRGYNVQSLVVGPSEREGMSRIVMVV 356
>gi|225175569|ref|ZP_03729563.1| Prephenate dehydrogenase [Dethiobacter alkaliphilus AHT 1]
gi|225168898|gb|EEG77698.1| Prephenate dehydrogenase [Dethiobacter alkaliphilus AHT 1]
Length = 366
Score = 37.7 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL--GRSQSTE 63
+ + D G++ V +LG+ GINIA L R +
Sbjct: 291 PTVYNLFVYVPDKTGVIGEVAGLLGDAGINIAEIELLRVREEEGG 335
>gi|224117232|ref|XP_002331754.1| predicted protein [Populus trichocarpa]
gi|222874451|gb|EEF11582.1| predicted protein [Populus trichocarpa]
Length = 587
Score = 37.7 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I D ++ + ++L E G+NI H S ++ +DG + E+L
Sbjct: 192 HEITFSTVDRPKLLSQLTSLLAEIGLNIQEAHAF-STVDGFSLDVFVVDGWLREET-EEL 249
Query: 84 SV 85
Sbjct: 250 RN 251
>gi|255949958|ref|XP_002565746.1| Pc22g18410 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592763|emb|CAP99129.1| Pc22g18410 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 322
Score = 37.7 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ V IL G NI + ++ + + + + G + V
Sbjct: 89 PPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVEDLSRMTIVLQGQ--DGV 146
Query: 80 LEK 82
+E+
Sbjct: 147 VEQ 149
>gi|254454775|ref|ZP_05068212.1| acetolactate synthase, small subunit [Octadecabacter antarcticus
238]
gi|198269181|gb|EDY93451.1| acetolactate synthase, small subunit [Octadecabacter antarcticus
238]
Length = 201
Score = 37.7 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 25/75 (33%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + ++ + G++ V + G NI + T H + ++ +
Sbjct: 41 ERHTLAVIVENEPGVLARVIGLFAGRGYNIESLTVAEIDHTGHLSRITVVTTGTPQTINQ 100
Query: 82 KLSVNVTIRFVKQFE 96
+ I V++
Sbjct: 101 ITAQLGRIVTVREVH 115
>gi|145256824|ref|XP_001401528.1| acetolactate synthase small subunit [Aspergillus niger CBS 513.88]
gi|134058437|emb|CAK47924.1| unnamed protein product [Aspergillus niger]
Length = 323
Score = 37.7 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ V IL G NI + ++ + + + + G + V
Sbjct: 89 PPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVEDLSRMTIVLQGQ--DGV 146
Query: 80 LEK 82
+E+
Sbjct: 147 VEQ 149
>gi|119501096|ref|XP_001267305.1| mitochondrial acetolactate synthase small subunit, putative
[Neosartorya fischeri NRRL 181]
gi|119415470|gb|EAW25408.1| mitochondrial acetolactate synthase small subunit, putative
[Neosartorya fischeri NRRL 181]
Length = 327
Score = 37.7 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ V IL G NI + ++ + + + + G + V
Sbjct: 89 PPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVEDLSRMTIVLQGQ--DGV 146
Query: 80 LEK 82
+E+
Sbjct: 147 VEQ 149
>gi|121706734|ref|XP_001271613.1| mitochondrial acetolactate synthase small subunit, putative
[Aspergillus clavatus NRRL 1]
gi|119399761|gb|EAW10187.1| mitochondrial acetolactate synthase small subunit, putative
[Aspergillus clavatus NRRL 1]
Length = 322
Score = 37.7 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ V IL G NI + ++ + + + + G + V
Sbjct: 89 PPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVEDLSRMTIVLQGQ--DGV 146
Query: 80 LEK 82
+E+
Sbjct: 147 VEQ 149
>gi|85859463|ref|YP_461665.1| homoserine dehydrogenase [Syntrophus aciditrophicus SB]
gi|85722554|gb|ABC77497.1| homoserine dehydrogenase [Syntrophus aciditrophicus SB]
Length = 437
Score = 37.7 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 25/79 (31%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+I+ + D I D G++ + IL E I+IA + +
Sbjct: 339 IEEIELMPVDEIISHYYFRFSALDRPGVLSKIAGILAEENISIATVIQKGRKQGQAVPIV 398
Query: 69 LCIDGSILNSVLEKLSVNV 87
+ S +V L
Sbjct: 399 MTTHRSKEKNVQRALRQID 417
>gi|169773775|ref|XP_001821356.1| acetolactate synthase small subunit [Aspergillus oryzae RIB40]
gi|238491792|ref|XP_002377133.1| mitochondrial acetolactate synthase small subunit, putative
[Aspergillus flavus NRRL3357]
gi|83769217|dbj|BAE59354.1| unnamed protein product [Aspergillus oryzae]
gi|220697546|gb|EED53887.1| mitochondrial acetolactate synthase small subunit, putative
[Aspergillus flavus NRRL3357]
Length = 322
Score = 37.7 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ V IL G NI + ++ + + + + G + V
Sbjct: 89 PPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVEDLSRMTIVLQGQ--DGV 146
Query: 80 LEK 82
+E+
Sbjct: 147 VEQ 149
>gi|70994656|ref|XP_752105.1| mitochondrial acetolactate synthase small subunit [Aspergillus
fumigatus Af293]
gi|66849739|gb|EAL90067.1| mitochondrial acetolactate synthase small subunit, putative
[Aspergillus fumigatus Af293]
gi|159124981|gb|EDP50098.1| mitochondrial acetolactate synthase small subunit, putative
[Aspergillus fumigatus A1163]
Length = 327
Score = 37.7 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ V IL G NI + ++ + + + + G + V
Sbjct: 89 PPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVEDLSRMTIVLQGQ--DGV 146
Query: 80 LEK 82
+E+
Sbjct: 147 VEQ 149
>gi|323358273|ref|YP_004224669.1| formyltetrahydrofolate hydrolase [Microbacterium testaceum StLB037]
gi|323274644|dbj|BAJ74789.1| formyltetrahydrofolate hydrolase [Microbacterium testaceum StLB037]
Length = 687
Score = 37.7 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 16/49 (32%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + +D GI+ V ++ G NI F A
Sbjct: 402 LQPDHACLIVHGSDTPGIIAAVSALIARQGGNIVAFDQYSDDPRGGAYF 450
>gi|91792551|ref|YP_562202.1| RelA/SpoT family protein [Shewanella denitrificans OS217]
gi|91714553|gb|ABE54479.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella denitrificans OS217]
Length = 735
Score = 37.7 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 31/89 (34%), Gaps = 5/89 (5%)
Query: 12 IQEINFDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I + G + + D G++ + +L N+ T+ A L
Sbjct: 647 VDVIWGENYSGGYRLRVRVVAHDRSGLLRDITTVLAAEKSNVMAMSSSSDIKTQTATVEL 706
Query: 70 CIDGSILN---SVLEKLSVNVTIRFVKQF 95
++ L+ V+ KL+ + ++
Sbjct: 707 ELELYNLDGLARVMAKLTQVEGVIESRRL 735
>gi|83814964|ref|YP_446391.1| threonine dehydratase [Salinibacter ruber DSM 13855]
gi|294508329|ref|YP_003572387.1| threonine dehydratase [Salinibacter ruber M8]
gi|83756358|gb|ABC44471.1| threonine dehydratase [Salinibacter ruber DSM 13855]
gi|294344657|emb|CBH25435.1| threonine dehydratase [Salinibacter ruber M8]
Length = 470
Score = 37.7 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 25/91 (27%), Gaps = 6/91 (6%)
Query: 4 DGKP---RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G R ++ + I L + + D G + + + G NI H R+
Sbjct: 371 GGNIDPARLQEVLDHAMADRIQLLRLRVRIDDQPGKMADISRRIAGQGANIRHVRHDRAV 430
Query: 61 ST---EHAISFLCIDGSILNSVLEKLSVNVT 88
A + S ++
Sbjct: 431 HGLDVGEAYLVFEVITSGRGQAENTIAAIED 461
>gi|154247800|ref|YP_001418758.1| (p)ppGpp synthetase I, SpoT/RelA [Xanthobacter autotrophicus Py2]
gi|154161885|gb|ABS69101.1| (p)ppGpp synthetase I, SpoT/RelA [Xanthobacter autotrophicus Py2]
Length = 742
Score = 37.7 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHL-GRSQSTEHAISFLCI-DGSILNSVLEK 82
I + + G + V +G+ G NI + RS + + + D LN+++
Sbjct: 668 RIIVTARNAPGSLAQVAGAIGDRGGNIDGLQMRSRSADFHEMVIDIEVFDLRHLNTIMAD 727
Query: 83 LSVNVTIRFVKQFE 96
L + V++
Sbjct: 728 LKAREVVAQVERVN 741
>gi|227524211|ref|ZP_03954260.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus hilgardii ATCC
8290]
gi|227088442|gb|EEI23754.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus hilgardii ATCC
8290]
Length = 395
Score = 37.7 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 5/91 (5%), Positives = 29/91 (31%), Gaps = 8/91 (8%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ I + ++ + ++L + + + + + + +
Sbjct: 297 VNFPRVDLPF-ISPHRLTFFFKTQENVMAKISSLLNKRALPV--MEMMNNNQNGFGYTIV 353
Query: 70 CID-GSILNS----VLEKLSVNVTIRFVKQF 95
D + ++E+ + + V++
Sbjct: 354 NTDFSDFSDEQVTNLVEEFASMKGMLRVRKL 384
>gi|227512995|ref|ZP_03943044.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus buchneri ATCC
11577]
gi|227083752|gb|EEI19064.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus buchneri ATCC
11577]
Length = 395
Score = 37.7 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 5/91 (5%), Positives = 29/91 (31%), Gaps = 8/91 (8%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ I + ++ + ++L + + + + + + +
Sbjct: 297 VNFPRVDLPF-ISPHRLTFFFKTQENVMAKISSLLNKRALPV--MEMMNNNQNGFGYTIV 353
Query: 70 CID-GSILNS----VLEKLSVNVTIRFVKQF 95
D + ++E+ + + V++
Sbjct: 354 NTDFSDFSDEQVTNLVEEFASMKGMLRVRKL 384
>gi|298530853|ref|ZP_07018255.1| Homoserine dehydrogenase [Desulfonatronospira thiodismutans ASO3-1]
gi|298510227|gb|EFI34131.1| Homoserine dehydrogenase [Desulfonatronospira thiodismutans ASO3-1]
Length = 432
Score = 37.7 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ--STEHAISFLCIDGSI 75
++ + R D G++ V ++ E+ I+IA + R +
Sbjct: 346 ELAVSRHYFRFTAQDKPGVLAAVAGVMSEHNISIA-QVVQRESQPQGGGVPIVFLTHKAQ 404
Query: 76 LNSVLEKLSVNV 87
+V + L
Sbjct: 405 AEAVHKALGEID 416
>gi|256005002|ref|ZP_05429974.1| Homoserine dehydrogenase [Clostridium thermocellum DSM 2360]
gi|281417011|ref|ZP_06248031.1| Homoserine dehydrogenase [Clostridium thermocellum JW20]
gi|255991071|gb|EEU01181.1| Homoserine dehydrogenase [Clostridium thermocellum DSM 2360]
gi|281408413|gb|EFB38671.1| Homoserine dehydrogenase [Clostridium thermocellum JW20]
gi|316940952|gb|ADU74986.1| homoserine dehydrogenase [Clostridium thermocellum DSM 1313]
Length = 428
Score = 37.7 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVN 86
D G++ + G++G++IA + + + A+ + + + ++
Sbjct: 357 KDKPGVLAKIAGCFGKHGVSIAS--VIQKDRGKDAVPLIFVTHLAKELSMKKAISDIAEV 414
Query: 87 VTIRFV 92
+ V
Sbjct: 415 EDVLMV 420
>gi|260887160|ref|ZP_05898423.1| acetolactate synthase, small subunit [Selenomonas sputigena ATCC
35185]
gi|330839070|ref|YP_004413650.1| acetolactate synthase, small subunit [Selenomonas sputigena ATCC
35185]
gi|260863222|gb|EEX77722.1| acetolactate synthase, small subunit [Selenomonas sputigena ATCC
35185]
gi|329746834|gb|AEC00191.1| acetolactate synthase, small subunit [Selenomonas sputigena ATCC
35185]
Length = 176
Score = 37.7 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ I+ + G++V V ++ NI +G +++ E + + + D +++ +++
Sbjct: 3 HVLSILVRNQSGVLVRVASMFSRREFNIDSLSVGVTETAEFSRITVVVHGDEELIDQMMK 62
Query: 82 KLSVNVTIRFVKQF 95
+L + V+
Sbjct: 63 QLEKLPDVVEVQAL 76
>gi|218128719|ref|ZP_03457523.1| hypothetical protein BACEGG_00290 [Bacteroides eggerthii DSM
20697]
gi|317475495|ref|ZP_07934758.1| acetolactate synthase [Bacteroides eggerthii 1_2_48FAA]
gi|217989174|gb|EEC55489.1| hypothetical protein BACEGG_00290 [Bacteroides eggerthii DSM
20697]
gi|316908326|gb|EFV30017.1| acetolactate synthase [Bacteroides eggerthii 1_2_48FAA]
Length = 187
Score = 37.7 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + + G++ V + INI ++ S + D + V +
Sbjct: 6 YTIIVHSENFAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDTIEKVTK 65
Query: 82 KLSVNVTIRFVKQFE 96
+++ + + F
Sbjct: 66 QITKKIDVLQAHYFT 80
>gi|159903681|ref|YP_001551025.1| homoserine dehydrogenase [Prochlorococcus marinus str. MIT 9211]
gi|159888857|gb|ABX09071.1| Homoserine dehydrogenase:ACT domain [Prochlorococcus marinus str.
MIT 9211]
Length = 438
Score = 37.7 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLEKLSV 85
++ D G++ +G I G + ++I + + I + + +L L ++
Sbjct: 365 LIAKDAPGVIGQIGKIFGSHNVSIQSIVQFDASEEDAEIVVITHKVFKGLLTDSLSEIQQ 424
Query: 86 NVTIRFV 92
I+ +
Sbjct: 425 LPEIKQI 431
>gi|300711405|ref|YP_003737219.1| threonine dehydratase [Halalkalicoccus jeotgali B3]
gi|299125088|gb|ADJ15427.1| threonine dehydratase [Halalkalicoccus jeotgali B3]
Length = 408
Score = 37.7 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 6/73 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGR---SQSTEHAISFLCIDG---SILNSV 79
+ + D+ G + + +L E+ NI R A I+ S ++
Sbjct: 332 LRVRIDDVPGRMADISTLLSEHDANIRTVRHERAVEDLDVGEAYLVFRIETSGASHSRAI 391
Query: 80 LEKLSVNVTIRFV 92
E + + V
Sbjct: 392 TETIEDHGYTVEV 404
>gi|300704298|ref|YP_003745901.1| homoserine dehydrogenase [Ralstonia solanacearum CFBP2957]
gi|299071962|emb|CBJ43292.1| homoserine dehydrogenase [Ralstonia solanacearum CFBP2957]
Length = 439
Score = 37.7 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 5/72 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVNV 87
D G++ + IL E GI+I S E + + ++ + + +
Sbjct: 365 DETGVLADITRILAEAGISIDAMLQKESPEDEPQTDIIMLSHVVVEKQVNAAIAAIEALP 424
Query: 88 TIRF-VKQFEFN 98
T+ V +
Sbjct: 425 TVLSKVTRLRME 436
>gi|261416638|ref|YP_003250321.1| Homoserine dehydrogenase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373094|gb|ACX75839.1| Homoserine dehydrogenase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327740|gb|ADL26941.1| homoserine dehydrogenase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 429
Score = 37.7 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 8/82 (9%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL----CIDGSILN 77
R + + D G++ + IL + I+I + +D +
Sbjct: 348 ARYYLRFTSRDACGVLAKITKILADNNISIETIIQKNVNDPGKVSIVVITEKTLDSKLSK 407
Query: 78 SV--LEKLSVNVTIRFVKQFEF 97
+V + LS + + F
Sbjct: 408 AVDAVNSLSEI--VEKSQVIRF 427
>gi|125972812|ref|YP_001036722.1| homoserine dehydrogenase [Clostridium thermocellum ATCC 27405]
gi|125713037|gb|ABN51529.1| homoserine dehydrogenase [Clostridium thermocellum ATCC 27405]
Length = 428
Score = 37.7 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVN 86
D G++ + G++G++IA + + + A+ + + + ++
Sbjct: 357 KDKPGVLAKIAGCFGKHGVSIAS--VIQKDRGKDAVPLIFVTHLAKELSMKKAISDIAEV 414
Query: 87 VTIRFV 92
+ V
Sbjct: 415 EDVLMV 420
>gi|237798967|ref|ZP_04587428.1| GTP pyrophosphokinase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331021821|gb|EGI01878.1| GTP pyrophosphokinase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 200
Score = 37.7 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 101 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 160
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 161 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 195
>gi|78223031|ref|YP_384778.1| ACT domain-containing protein [Geobacter metallireducens GS-15]
gi|78194286|gb|ABB32053.1| ACT domain protein [Geobacter metallireducens GS-15]
Length = 143
Score = 37.7 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
I I + G + + +LG+ G+NI L + + D VL++
Sbjct: 6 ISIFIENKSGRLAEITKVLGDAGVNIRALSLADTSDFGILRLIVN-DRETAKQVLKE 61
>gi|94502135|ref|ZP_01308636.1| GTP pyrophosphokinase [Oceanobacter sp. RED65]
gi|94425737|gb|EAT10744.1| GTP pyrophosphokinase [Oceanobacter sp. RED65]
Length = 747
Score = 37.7 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 32/95 (33%), Gaps = 16/95 (16%)
Query: 8 RFIKI-------QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFH-LGRS 59
R ++ +V + D G+V V L +NI F+ L +
Sbjct: 656 RITEVSWGQQPENLYPVEV-------VLKAYDRRGLVKDVSMTLANDEVNIVSFNTLSQD 708
Query: 60 QSTEHAISFLCIDG-SILNSVLEKLSVNVTIRFVK 93
T + ID L +L KL + I V+
Sbjct: 709 DGTADLKVTIEIDSLQRLGKILNKLQMLPNIIDVR 743
>gi|323359643|ref|YP_004226039.1| acetolactate synthase, small (regulatory) subunit [Microbacterium
testaceum StLB037]
gi|323276014|dbj|BAJ76159.1| acetolactate synthase, small (regulatory) subunit [Microbacterium
testaceum StLB037]
Length = 169
Score = 37.7 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCIDGSILNS 78
+ R ++ ++ D G++ V + G NI +G ++ + ++G L
Sbjct: 1 MSRHVLSLLVEDKPGLLTRVAGLFARRGFNIESLAVGVTEVPGLSRITVVVDVEGLPLEQ 60
Query: 79 VLEKLSVNVTIRFV 92
V ++L+ + + +
Sbjct: 61 VTKQLNKLINVIKI 74
>gi|271967384|ref|YP_003341580.1| GTP diphosphokinase [Streptosporangium roseum DSM 43021]
gi|270510559|gb|ACZ88837.1| GTP diphosphokinase [Streptosporangium roseum DSM 43021]
Length = 785
Score = 37.7 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN---SVLEKLSVNVT 88
D ++ V L + +NI + + AIS + VL+ +
Sbjct: 715 DRPRLLSDVTRTLSDQHVNILSASV-TTSRDRVAISKFTFEMGDPKHLGHVLKAVRNIPG 773
Query: 89 IRFV 92
+ V
Sbjct: 774 VYDV 777
>gi|254466061|ref|ZP_05079472.1| acetolactate synthase, small subunit [Rhodobacterales bacterium
Y4I]
gi|206686969|gb|EDZ47451.1| acetolactate synthase, small subunit [Rhodobacterales bacterium
Y4I]
Length = 186
Score = 37.7 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R I ++ + G++ V + G NI + T H +S + I + V+E
Sbjct: 27 ERHTIAVLVENEPGVLARVIGLFSGRGYNIESLTVAEVDHTGH-LSRITIVTTGTPQVIE 85
Query: 82 KLSV-NVTIRFVKQFE 96
++ I V+
Sbjct: 86 QIKAQLGRIVSVRDVH 101
>gi|163759005|ref|ZP_02166091.1| acetolactate synthase 3 small subunit [Hoeflea phototrophica
DFL-43]
gi|162283409|gb|EDQ33694.1| acetolactate synthase 3 small subunit [Hoeflea phototrophica
DFL-43]
Length = 190
Score = 37.7 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ ++ + G++ V + G NI + E +S + I + +
Sbjct: 19 ARPETHTLSVLVDNEPGVLARVIGLFSGRGYNIESLTVS-ETEHEAHLSRITIVTTARPN 77
Query: 79 VLEKLS-VNVTIRFV-KQFEFNV 99
VLE++ I V + + V
Sbjct: 78 VLEQIKSQLERIVPVHRVVDLTV 100
>gi|260904887|ref|ZP_05913209.1| acetolactate synthase, small subunit [Brevibacterium linens BL2]
Length = 170
Score = 37.7 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID--GSILNSV 79
R + ++ + G++ ++ G NI +G ++ E + + +D L V
Sbjct: 3 NRHTLSVLVENKPGVLTRFTGLIARRGFNIHSLAVGVTEHDELSRITVVVDVKDVPLEQV 62
Query: 80 LEKLSVNVTIRFVKQFE 96
++L+ V + + + E
Sbjct: 63 TKQLNKLVNVIKIVELE 79
>gi|78184248|ref|YP_376683.1| acetolactate synthase 3 regulatory subunit [Synechococcus sp.
CC9902]
gi|78168542|gb|ABB25639.1| acetolactate synthase, small subunit [Synechococcus sp. CC9902]
Length = 176
Score = 37.7 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G +++ + + D L + +
Sbjct: 3 HTLSVLVEDESGALSRIAGLFARRGFNIHSLAVGPAEADGQSRLTMVVEGDAQTLEQMTK 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLDKLVNVLQV 73
>gi|21226771|ref|NP_632693.1| acetolactate synthase 3 regulatory subunit [Methanosarcina mazei
Go1]
gi|20905064|gb|AAM30365.1| Acetolactate synthase small subunit [Methanosarcina mazei Go1]
Length = 161
Score = 37.7 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V ++ G NI +G ++ + + + + D +L V +
Sbjct: 3 HTLAVLVENKSGVLSRVASLFSRRGYNIDSLAVGVTEDPDISRITIVVHGDDHVLEQVTK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 63 QLNKLIDVIKV 73
>gi|20092587|ref|NP_618662.1| acetolactate synthase 3 regulatory subunit [Methanosarcina
acetivorans C2A]
gi|19917864|gb|AAM07142.1| acetolactate synthase, small subunit [Methanosarcina acetivorans
C2A]
Length = 161
Score = 37.7 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V ++ G NI +G ++ + + + + D +L V +
Sbjct: 3 HTLAVLVENKSGVLSRVASLFSRRGYNIDSLAVGVTEDPDISRITIVVHGDDHVLEQVTK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 63 QLNKLIDVIKV 73
>gi|283783177|ref|YP_003373931.1| GTP diphosphokinase [Gardnerella vaginalis 409-05]
gi|283441483|gb|ADB13949.1| GTP diphosphokinase [Gardnerella vaginalis 409-05]
Length = 783
Score = 37.7 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + +F D L ++L + +
Sbjct: 699 DRQHLLSDVTRVLSDHGVNILSGTIATGDDRVATSQFTFEMADPQHLATLLAAIRKIEGV 758
Query: 90 RFV 92
V
Sbjct: 759 FDV 761
>gi|125975002|ref|YP_001038912.1| acetolactate synthase, small subunit [Clostridium thermocellum
ATCC 27405]
gi|256005112|ref|ZP_05430082.1| acetolactate synthase, small subunit [Clostridium thermocellum
DSM 2360]
gi|281418580|ref|ZP_06249599.1| acetolactate synthase, small subunit [Clostridium thermocellum
JW20]
gi|125715227|gb|ABN53719.1| acetolactate synthase, small subunit [Clostridium thermocellum
ATCC 27405]
gi|255990963|gb|EEU01075.1| acetolactate synthase, small subunit [Clostridium thermocellum
DSM 2360]
gi|281407664|gb|EFB37923.1| acetolactate synthase, small subunit [Clostridium thermocellum
JW20]
gi|316939163|gb|ADU73197.1| acetolactate synthase, small subunit [Clostridium thermocellum
DSM 1313]
Length = 170
Score = 37.7 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNS 78
+ + + ++ + G++ + + G NI +G +++ E + + +DG I+
Sbjct: 1 MAKHTLSVLVENHAGVLSRIAGLFSRRGFNIDSLAVGVTENPEISRMTIVVDGDDYIVEQ 60
Query: 79 VLEKLSVNVTIRFVKQF 95
V ++L+ V + +K+
Sbjct: 61 VTKQLNKLVDVIKIKEL 77
>gi|331016790|gb|EGH96846.1| RelA/SpoT protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 140
Score = 37.7 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 41 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 100
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 101 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 135
>gi|227552509|ref|ZP_03982558.1| D-3-phosphoglycerate dehydrogenase [Enterococcus faecium TX1330]
gi|257888257|ref|ZP_05667910.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
1,141,733]
gi|257896854|ref|ZP_05676507.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
Com12]
gi|293378518|ref|ZP_06624681.1| 4-phosphoerythronate dehydrogenase [Enterococcus faecium PC4.1]
gi|227178359|gb|EEI59331.1| D-3-phosphoglycerate dehydrogenase [Enterococcus faecium TX1330]
gi|257824311|gb|EEV51243.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
1,141,733]
gi|257833419|gb|EEV59840.1| D-isomer specific 2-hydroxyacid dehydrogenase [Enterococcus faecium
Com12]
gi|292642847|gb|EFF60994.1| 4-phosphoerythronate dehydrogenase [Enterococcus faecium PC4.1]
Length = 386
Score = 37.7 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG---SILNS 78
I I+ + ++L + + IA R+ EH + ID LN
Sbjct: 306 APFRFTIFYQKKTNILAEIFSLLNKNELVIADI--SRNHKNEHVYILIDIDSTDFEQLNQ 363
Query: 79 VLEKLSVNVTIRFVKQFE 96
V ++L +R V+ +
Sbjct: 364 VKQQLEKISGVRKVRLLK 381
>gi|91202031|emb|CAJ75091.1| strongly similar to homoserine dehydrogenase [Candidatus Kuenenia
stuttgartiensis]
Length = 431
Score = 37.7 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + ILG + I+IA +++ H L + ++L LS +
Sbjct: 359 IDRPGVLAKISGILGNHEISIASVIQRQAKEKGHVPLILMTHIAEEGNLLNALSEIKQLD 418
Query: 91 FVK 93
VK
Sbjct: 419 VVK 421
>gi|297584099|ref|YP_003699879.1| hypothetical protein Bsel_1806 [Bacillus selenitireducens MLS10]
gi|297142556|gb|ADH99313.1| hypothetical protein Bsel_1806 [Bacillus selenitireducens MLS10]
Length = 257
Score = 37.7 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Query: 27 CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVN 86
+N + G++ V ++LG INI + + + I + + +++L
Sbjct: 10 YHINQNRPGLLGDVASLLGMLKINIITINGVENSNRGMLI------KTKSDESIQRLRYI 63
Query: 87 VTIRFVKQFE 96
+ V
Sbjct: 64 LNTMDVITLH 73
>gi|315604211|ref|ZP_07879277.1| prephenate dehydrogenase [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313917|gb|EFU61968.1| prephenate dehydrogenase [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 400
Score = 37.7 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
++ D G + + + LGE INI L S + ++ + ID ++ + + L
Sbjct: 335 VLIPDEPGALGRLFSELGESSINIEDLVLEHSAGAQAGVARVMIDPAVADRCVADLE 391
>gi|298253944|ref|ZP_06977531.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Gardnerella vaginalis 5-1]
gi|297532087|gb|EFH71062.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Gardnerella vaginalis 5-1]
Length = 783
Score = 37.7 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + +F D L ++L + +
Sbjct: 699 DRQHLLSDVTRVLSDHGVNILSGTIATGDDRVATSQFTFEMADPQHLATLLAAIRKIEGV 758
Query: 90 RFV 92
V
Sbjct: 759 FDV 761
>gi|240948210|ref|ZP_04752604.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus minor NM305]
gi|240297450|gb|EER47976.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Actinobacillus minor NM305]
Length = 593
Score = 37.7 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 28/79 (35%), Gaps = 9/79 (11%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDG 73
+ D+++ + G++ + N + NI H + + + D
Sbjct: 519 DVDIELE-------IKNQPGVLASLTNTIAALNSNIGSVHSQPKDNGNYQVKLQISVTDN 571
Query: 74 SILNSVLEKLSVNVTIRFV 92
+ L V+++L + V
Sbjct: 572 AHLYVVIQRLMKLNGVVKV 590
>gi|229137830|ref|YP_412246.2| homoserine dehydrogenase [Nitrosospira multiformis ATCC 25196]
Length = 439
Score = 37.7 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 8/73 (10%), Positives = 21/73 (28%), Gaps = 5/73 (6%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVN 86
D G + + +L + GI+I E + + + + + ++
Sbjct: 362 MDKPGALADITRVLADLGISIEAMMQKEPSEGEDQVDIIMLTHLAVERNVNDAIARIKRL 421
Query: 87 VTIR-FVKQFEFN 98
V +
Sbjct: 422 PITTGKVTRIRLE 434
>gi|150388481|ref|YP_001318530.1| prephenate dehydrogenase [Alkaliphilus metalliredigens QYMF]
gi|149948343|gb|ABR46871.1| Prephenate dehydrogenase [Alkaliphilus metalliredigens QYMF]
Length = 375
Score = 37.7 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
D + I D G++ + I+G+ INI + ++ E + +
Sbjct: 289 DYIPPLYDLIIDVGDRPGVLGELTQIMGKNNINIKEIEILHAREGETGAIRIALASKTEE 348
Query: 78 S-VLEKLSV 85
L L
Sbjct: 349 EKALHVLKQ 357
>gi|149236766|ref|XP_001524260.1| acetolactate synthase small subunit, mitochondrial precursor
[Lodderomyces elongisporus NRRL YB-4239]
gi|146451795|gb|EDK46051.1| acetolactate synthase small subunit, mitochondrial precursor
[Lodderomyces elongisporus NRRL YB-4239]
Length = 302
Score = 37.7 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
+ ++ + + G++ V L G NI + ++ + + + + ++
Sbjct: 70 APPKQHVLNCLVQNEPGVLSSVSGTLAARGFNIDSLVVCNTEVKDLSRMTIVLKGQDGVV 129
Query: 77 NSVLEKLSVNVTIRFV 92
++ V + V
Sbjct: 130 EQARRQIEDLVPVYAV 145
>gi|326793990|ref|YP_004311810.1| homoserine dehydrogenase [Marinomonas mediterranea MMB-1]
gi|326544754|gb|ADZ89974.1| Homoserine dehydrogenase [Marinomonas mediterranea MMB-1]
Length = 453
Score = 37.7 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 9/78 (11%), Positives = 28/78 (35%), Gaps = 5/78 (6%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
+ + + D G++ + IL E GI+I + R ++ + + + ++
Sbjct: 364 PVEEIESGFFLNMRIQDRAGVLANITQILSENGISIES-VIQRERNGGDLVPLVVMTHTV 422
Query: 76 LN----SVLEKLSVNVTI 89
+ + + +
Sbjct: 423 KEQNMNAAITAIEELPDV 440
>gi|297243581|ref|ZP_06927512.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Gardnerella vaginalis AMD]
gi|296888332|gb|EFH27073.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Gardnerella vaginalis AMD]
Length = 742
Score = 37.7 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + +F D L ++L + +
Sbjct: 658 DRQHLLSDVTRVLSDHGVNILSGTIATGDDRVATSQFTFEMADPQHLATLLAAIRKIEGV 717
Query: 90 RFV 92
V
Sbjct: 718 FDV 720
>gi|220925291|ref|YP_002500593.1| acetolactate synthase small subunit [Methylobacterium nodulans
ORS 2060]
gi|219949898|gb|ACL60290.1| acetolactate synthase, small subunit [Methylobacterium nodulans
ORS 2060]
Length = 180
Score = 37.7 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
I R + ++ + G++ + + G NI + ++ +H +S + I + N+V
Sbjct: 16 SINRHTLAVIVDNEPGVLARIAGLFSGRGYNIESLTVSETEHAQH-LSRITIVTAGTNAV 74
Query: 80 LEKLSV 85
++++
Sbjct: 75 IDQIKA 80
>gi|304404960|ref|ZP_07386620.1| acetolactate synthase, small subunit [Paenibacillus
curdlanolyticus YK9]
gi|304345839|gb|EFM11673.1| acetolactate synthase, small subunit [Paenibacillus
curdlanolyticus YK9]
Length = 161
Score = 37.3 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ V + G G NI +G S+ + + D + L + +
Sbjct: 4 HTVAVLVNDQPGVLQRVSGLFGRRGFNIESITVGSSEEPGLSRMVIVTSGDDNTLEQITK 63
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 64 QLYKLIDVIKV 74
>gi|206890423|ref|YP_002248838.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742361|gb|ACI21418.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 702
Score = 37.3 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCI-DGSILNSVLEKLSVNVT 88
D GI+ + +L +NI S + + D + L+ ++ K+S
Sbjct: 637 IDAPGILATITALLSANQVNITAVKANSTSDKRALIDFTIEVKDRTHLSDIINKISQIGE 696
Query: 89 IRFVK 93
+ VK
Sbjct: 697 VISVK 701
>gi|150403590|ref|YP_001330884.1| acetolactate synthase 3 regulatory subunit [Methanococcus
maripaludis C7]
gi|159904629|ref|YP_001548291.1| acetolactate synthase 3 regulatory subunit [Methanococcus
maripaludis C6]
gi|150034620|gb|ABR66733.1| acetolactate synthase, small subunit [Methanococcus maripaludis
C7]
gi|159886122|gb|ABX01059.1| acetolactate synthase, small subunit [Methanococcus maripaludis
C6]
Length = 169
Score = 37.3 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 33 ILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTIR 90
G++ + + NI+ +G +++ + A + + D ++L V+++L+ V +
Sbjct: 14 KPGVLQRISGLFTRRWFNISSMTVGSTENPDVARMTIVVQGDDTVLEQVVKQLNKLVEVI 73
Query: 91 FVKQFE 96
V
Sbjct: 74 KVTDLN 79
>gi|152965220|ref|YP_001361004.1| homoserine dehydrogenase [Kineococcus radiotolerans SRS30216]
gi|151359737|gb|ABS02740.1| Homoserine dehydrogenase [Kineococcus radiotolerans SRS30216]
Length = 450
Score = 37.3 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 26/67 (38%), Gaps = 6/67 (8%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQST---EHAISFLCIDGSILNSV---LEKLSV 85
D G++ V + ++G++I + + A+ + + ++ +E+L
Sbjct: 373 DKPGVLAQVAGVFAQHGVSIEAVQQRQVTTGDGAGRAVLVVVTHSATDAALAATVEELED 432
Query: 86 NVTIRFV 92
+ V
Sbjct: 433 LEIVDSV 439
>gi|116619322|ref|YP_821478.1| acetolactate synthase small subunit [Candidatus Solibacter
usitatus Ellin6076]
gi|116222484|gb|ABJ81193.1| acetolactate synthase, small subunit [Candidatus Solibacter
usitatus Ellin6076]
Length = 173
Score = 37.3 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKLSVNVT 88
+ G ++ V +L + G NI + R+ E + + +D V+++++ +
Sbjct: 10 ENKPGALMRVTGLLTQRGYNIESLTVARTLDPELSRMTIVVDVDSTQRLQVIKQMNKLIN 69
Query: 89 IRFVKQFE 96
+
Sbjct: 70 VLQANDLT 77
>gi|307823068|ref|ZP_07653298.1| RelA/SpoT family protein [Methylobacter tundripaludum SV96]
gi|307735843|gb|EFO06690.1| RelA/SpoT family protein [Methylobacter tundripaludum SV96]
Length = 710
Score = 37.3 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN---SVLEK 82
I I + ++ V IL + I+I++ L A+ L I + VL K
Sbjct: 638 IVIHAFNSQNLLNDVTQILAQAKIHISNAALDTH-PDFSALLNLTIQIENTDQLSQVLNK 696
Query: 83 LSVNVTIRFVK 93
+S I VK
Sbjct: 697 ISQLPNIVDVK 707
>gi|84494548|ref|ZP_00993667.1| homoserine dehydrogenase [Janibacter sp. HTCC2649]
gi|84384041|gb|EAP99921.1| homoserine dehydrogenase [Janibacter sp. HTCC2649]
Length = 450
Score = 37.3 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL----EKLSVNV 87
D G++ V + E+G++I + S + + +S L + L+
Sbjct: 377 DRPGVLAQVASAFAEHGVSIETVRQRVLGEGDERASLVIVTHRAPDSALAATVDALTGLD 436
Query: 88 TIRFV 92
T+ V
Sbjct: 437 TVDAV 441
>gi|302871127|ref|YP_003839763.1| acetolactate synthase, small subunit [Caldicellulosiruptor
obsidiansis OB47]
gi|302573986|gb|ADL41777.1| acetolactate synthase, small subunit [Caldicellulosiruptor
obsidiansis OB47]
Length = 170
Score = 37.3 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +G ++ + + + D I+ V +
Sbjct: 3 YTLSVLVENHPGVLSRVAGLFSRRGFNIDSLAVGVTEDPAISRMTIVVNGDDYIVEQVTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + +K+
Sbjct: 63 QLNKLIDVIKIKKLN 77
>gi|296410808|ref|XP_002835127.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295627902|emb|CAZ79248.1| unnamed protein product [Tuber melanosporum]
Length = 313
Score = 37.3 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILN 77
R ++ + + G++ V IL G NI + ++ + + + + G ++
Sbjct: 80 PPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVPDLSRMTIVLSGQDGVVE 139
Query: 78 SVLEKLSVN 86
+L
Sbjct: 140 QARRQLEDL 148
>gi|284009170|emb|CBA76216.1| GTP pyrophosphokinase [Arsenophonus nasoniae]
Length = 744
Score = 37.3 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 7/91 (7%)
Query: 8 RFIKIQEINFDVDIGRLMIC--IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R + I + + I+ D G++ + IL +N+ + A
Sbjct: 651 RIV--DAIWGENYSSGYSLGLRIIANDRSGLLRDITTILANEKVNVLSVSSRSDVKQQLA 708
Query: 66 ISFLCIDG---SILNSVLEKLSVNVTIRFVK 93
+ I+ +L +L KL+ + K
Sbjct: 709 TIDMNIEIYNLPVLARILAKLNQLPDVFEAK 739
>gi|116204861|ref|XP_001228241.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88176442|gb|EAQ83910.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 320
Score = 37.3 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
R ++ + + G++ V IL G NI + ++ + + + + ++
Sbjct: 80 APPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCSTEVVDLSRMTIVLTGQDGVV 139
Query: 77 NSVLEKLSVN 86
+L
Sbjct: 140 EQARRQLEDL 149
>gi|256372317|ref|YP_003110141.1| acetolactate synthase, small subunit [Acidimicrobium ferrooxidans
DSM 10331]
gi|256008901|gb|ACU54468.1| acetolactate synthase, small subunit [Acidimicrobium ferrooxidans
DSM 10331]
Length = 190
Score = 37.3 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 32/89 (35%), Gaps = 2/89 (2%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLG--RSQSTEHAI 66
+ I I V ++ ++ + G++ V + G NI + +
Sbjct: 7 LVPIGAIRQPVHGRHHILSVLVENKAGVLARVALLFSRRGFNIYSLAVAPTDDERFSRIT 66
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ ++ + L + ++L + + + +
Sbjct: 67 MVVDVETAPLEQITKQLHKLINVLKITEL 95
>gi|90022247|ref|YP_528074.1| PII uridylyl-transferase [Saccharophagus degradans 2-40]
gi|89951847|gb|ABD81862.1| protein-P-II uridylyltransferase [Saccharophagus degradans 2-40]
Length = 900
Score = 37.3 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 13/84 (15%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG-------- 73
G I + D + V N L + +NI + + + A +F +D
Sbjct: 708 GATQIFVRVKDAPHVFTAVANALAQQNLNIQDARVYSAANGYTADTFYVLDDNFQPIGDD 767
Query: 74 -----SILNSVLEKLSVNVTIRFV 92
I SVLE+L + R V
Sbjct: 768 PARSEKIRESVLEELRLVSGYRDV 791
>gi|86606770|ref|YP_475533.1| acetolactate synthase 3 regulatory subunit [Synechococcus sp.
JA-3-3Ab]
gi|86555312|gb|ABD00270.1| acetolactate synthase, small subunit [Synechococcus sp. JA-3-3Ab]
Length = 174
Score = 37.3 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ + D G++ + + G NI +G ++ + + + D + + +
Sbjct: 3 HTLSALVQDQPGVLTRIAGMFARRGFNIDSLTVGPTERPGISRITMVVQGDEHDVEQMTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V
Sbjct: 63 QLYKLIDVLKVTDIT 77
>gi|226294397|gb|EEH49817.1| D-3-phosphoglycerate dehydrogenase [Paracoccidioides brasiliensis
Pb18]
Length = 486
Score = 37.3 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 9/72 (12%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
+ + ++ +I G++ V ILG++ ++ + A I +
Sbjct: 401 RVNAPP----VIFIHQNIPGVLRKVNEILGDHNVD----KQMTDSRGDVAYLMADI-SDV 451
Query: 76 LNSVLEKLSVNV 87
S ++ LS +
Sbjct: 452 STSDIKDLSNHD 463
>gi|332187917|ref|ZP_08389650.1| relA/SpoT family protein [Sphingomonas sp. S17]
gi|332012078|gb|EGI54150.1| relA/SpoT family protein [Sphingomonas sp. S17]
Length = 699
Score = 37.3 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL-GRSQSTEHAISFLCI-DGSI 75
D + I ++ + G + + I+G++ NI + L R + + + D
Sbjct: 620 DSEGATARISVMVKNEPGALGILATIIGQHKANIINVRLDTRDTRFHTNLIDVEVHDVQH 679
Query: 76 LNSVLEKLSVNVTIRFV 92
L ++ L + V
Sbjct: 680 LMRLIAALRAADVVSSV 696
>gi|154500525|ref|ZP_02038563.1| hypothetical protein BACCAP_04198 [Bacteroides capillosus ATCC
29799]
gi|150270756|gb|EDM98052.1| hypothetical protein BACCAP_04198 [Bacteroides capillosus ATCC
29799]
Length = 167
Score = 37.3 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF----LCIDGSILNSVLEKL 83
I+ D G++ V NI G NI + G S A++ ++ + ++ ++
Sbjct: 95 IMMKDEPGVLSAVLNIFARTGGNILTINQGIPVSGCAAVTIGAETSGLEEPV-EDLMNRV 153
Query: 84 SVNVTIRFVKQF 95
+ + +
Sbjct: 154 AAQEGVIRCEIL 165
>gi|134045988|ref|YP_001097474.1| acetolactate synthase 3 regulatory subunit [Methanococcus
maripaludis C5]
gi|132663613|gb|ABO35259.1| acetolactate synthase, small subunit [Methanococcus maripaludis
C5]
Length = 169
Score = 37.3 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 33 ILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTIR 90
G++ + + NI+ +G +++ + A + + D ++L V+++L+ V +
Sbjct: 14 KPGVLQRISGLFTRRWFNISSMTVGSTENPDVARMTIVVQGDDTVLEQVVKQLNKLVEVI 73
Query: 91 FVKQFE 96
V
Sbjct: 74 KVTDLN 79
>gi|82410745|gb|ABB74854.1| homoserine dehydrogenase [Nitrosospira multiformis ATCC 25196]
Length = 452
Score = 37.3 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 8/73 (10%), Positives = 21/73 (28%), Gaps = 5/73 (6%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVN 86
D G + + +L + GI+I E + + + + + ++
Sbjct: 375 MDKPGALADITRVLADLGISIEAMMQKEPSEGEDQVDIIMLTHLAVERNVNDAIARIKRL 434
Query: 87 VTIR-FVKQFEFN 98
V +
Sbjct: 435 PITTGKVTRIRLE 447
>gi|189500950|ref|YP_001960420.1| (p)ppGpp synthetase I, SpoT/RelA [Chlorobium phaeobacteroides BS1]
gi|189496391|gb|ACE04939.1| (p)ppGpp synthetase I, SpoT/RelA [Chlorobium phaeobacteroides BS1]
Length = 731
Score = 37.3 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLEKLSV 85
++ D +GI + +L + INI L + + +I ++++K+
Sbjct: 661 VIGEDRMGITNHITAVLSKSDINIRSISLHARDGMFIGTVMIYV-RNISRLKALIDKIKK 719
Query: 86 NVTIRFVKQFE 96
+ V++
Sbjct: 720 VQGVFSVERLS 730
>gi|323337971|gb|EGA79210.1| Ser3p [Saccharomyces cerevisiae Vin13]
gi|323355279|gb|EGA87104.1| Ser3p [Saccharomyces cerevisiae VL3]
Length = 453
Score = 37.3 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSILNSVLE 81
+ ++ ++ G++ V +IL + NI + E A +D S + + E
Sbjct: 383 RVLYIHQNVPGVLKTVNDILSNH--NIEKQFS--DSNGEIAYLMADISSVDQSDIKDIYE 438
Query: 82 KLSVNVTIRFVKQF 95
+L+ ++
Sbjct: 439 QLNQTSAKISIRLL 452
>gi|217967748|ref|YP_002353254.1| Homoserine dehydrogenase [Dictyoglomus turgidum DSM 6724]
gi|217336847|gb|ACK42640.1| Homoserine dehydrogenase [Dictyoglomus turgidum DSM 6724]
Length = 424
Score = 37.3 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
D G++ + ILGE I+I+ S+ A + + S+ + +
Sbjct: 351 KDQPGVLAQIAKILGENHISISSVIQKETSEKEGKAELVILTHKTYEKSMSKAIEEIK 408
>gi|284163404|ref|YP_003401683.1| amino acid-binding ACT domain protein [Haloterrigena turkmenica DSM
5511]
gi|284013059|gb|ADB59010.1| amino acid-binding ACT domain protein [Haloterrigena turkmenica DSM
5511]
Length = 167
Score = 37.3 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D GIV + +L E+ I+I + T+ +L D + +V+ ++ F
Sbjct: 104 DQKGIVAGITGLLAEHDISIRQTISEDPEFTDEPQLYLITDQELPGNVITEIRDLE---F 160
Query: 92 VKQFEF 97
V++ E
Sbjct: 161 VRKIEL 166
>gi|255657983|ref|ZP_05403392.1| homoserine dehydrogenase [Mitsuokella multacida DSM 20544]
gi|260850184|gb|EEX70191.1| homoserine dehydrogenase [Mitsuokella multacida DSM 20544]
Length = 433
Score = 37.3 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---ID 72
D + ++ D G++ + G+ G+++ R +HA ++
Sbjct: 342 PLDATSSSYYVRLLVDDKPGVLGAIATAFGDAGVSLKSVIQTRRNVVDHAEIVAITHLVE 401
Query: 73 GSILNSVLEKLSVNVTIRFVKQF 95
+ L+ L + V+
Sbjct: 402 HKRIEKALKALRKLPVVDEVRNV 424
>gi|254428429|ref|ZP_05042136.1| formyltetrahydrofolate deformylase [Alcanivorax sp. DG881]
gi|196194598|gb|EDX89557.1| formyltetrahydrofolate deformylase [Alcanivorax sp. DG881]
Length = 290
Score = 37.3 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 18/62 (29%), Gaps = 1/62 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D GI+ V L +G NI F L L+ E L
Sbjct: 10 RLLVTCPDKPGIISAVSTFLYNHGANITDFDQHSSDAHGGTFFLRLEFQTPELDCSREAL 69
Query: 84 SV 85
Sbjct: 70 RN 71
>gi|258545036|ref|ZP_05705270.1| GTP diphosphokinase [Cardiobacterium hominis ATCC 15826]
gi|258519734|gb|EEV88593.1| GTP diphosphokinase [Cardiobacterium hominis ATCC 15826]
Length = 716
Score = 37.3 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAH--FHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I I D ++ + IL I I + + D L+ V++++
Sbjct: 643 IAIDAFDRPHLLRDISQILANEKIPILNVKMQQDDRNRIYGSFGLEITDMEQLSRVIDRI 702
Query: 84 SVNVTIRFVKQFE 96
+ + V++ +
Sbjct: 703 AQVKDVAGVRRVQ 715
>gi|292657092|ref|YP_003536989.1| putative repressor of tryptophan metabolism TrpY [Haloferax
volcanii DS2]
gi|291372743|gb|ADE04970.1| probable repressor of tryptophan metabolism TrpY [Haloferax
volcanii DS2]
Length = 167
Score = 37.3 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D GIV V + L + I+I + T+ ++ D I +L LS +R
Sbjct: 104 DEPGIVATVTSKLADADISIRQTISEDPEFTDDPKLYIITDEPIPGDLLNDLSNLGFVRR 163
Query: 92 V 92
+
Sbjct: 164 I 164
>gi|291294723|ref|YP_003506121.1| formyltetrahydrofolate deformylase [Meiothermus ruber DSM 1279]
gi|290469682|gb|ADD27101.1| formyltetrahydrofolate deformylase [Meiothermus ruber DSM 1279]
Length = 286
Score = 37.3 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 19/62 (30%), Gaps = 4/62 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGS---ILNSVL 80
+ I D GIV V N L +G NI L + +L
Sbjct: 8 RLLITCPDRPGIVAAVSNFLFNHGANITALDQHSTDPEGGLFFMRLEFQTPHLDVSREIL 67
Query: 81 EK 82
EK
Sbjct: 68 EK 69
>gi|17220753|gb|AAK37762.1| ThrA [Synechococcus elongatus PCC 7942]
Length = 267
Score = 37.3 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL---CIDGSILNSVLEKLSVNV 87
D G++ VG I GE GI++ + S E A + + I+ + +L
Sbjct: 197 QDSPGVIGKVGTIFGEQGISLESI-VQTDVSGETAELVVITHEVQEGIMRQAITQLEALP 255
Query: 88 TI 89
+
Sbjct: 256 LV 257
>gi|68479177|ref|XP_716394.1| hypothetical protein CaO19.12728 [Candida albicans SC5314]
gi|68479306|ref|XP_716332.1| hypothetical protein CaO19.5263 [Candida albicans SC5314]
gi|46437998|gb|EAK97336.1| hypothetical protein CaO19.5263 [Candida albicans SC5314]
gi|46438061|gb|EAK97398.1| hypothetical protein CaO19.12728 [Candida albicans SC5314]
gi|238878404|gb|EEQ42042.1| D-3-phosphoglycerate dehydrogenase 1 [Candida albicans WO-1]
Length = 463
Score = 37.3 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILN--SVLE 81
+ ++ ++ G++ V NIL + NI + A I D I + S+ E
Sbjct: 393 RVLYIHQNVPGVLKTVNNILSNH--NIEKQFS--DSQGDIAYLMADISDVDISDIQSLYE 448
Query: 82 KLSVNVTIRFVKQF 95
+L +
Sbjct: 449 QLEQTPYKIATRLL 462
>gi|300087773|ref|YP_003758295.1| acetolactate synthase small subunit [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527506|gb|ADJ25974.1| acetolactate synthase, small subunit [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 169
Score = 37.3 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-- 76
+ + I + A+ G++ + ++ G NI +G S++ + + DG+
Sbjct: 1 MAANKHTIVALVANRPGVLNRMASLFRRRGFNIDSIAVGHSETPNLSRMTIVADGTTTQV 60
Query: 77 NSVLEKLSVNVTIRFVKQFE 96
+ +++ + + V+
Sbjct: 61 EQIRKQVEKIIDVIRVQDIT 80
>gi|260462184|ref|ZP_05810428.1| acetolactate synthase, small subunit [Mesorhizobium opportunistum
WSM2075]
gi|259032044|gb|EEW33311.1| acetolactate synthase, small subunit [Mesorhizobium opportunistum
WSM2075]
Length = 191
Score = 37.3 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ ++ + G++ V + G NI + ++ +H +S + I V
Sbjct: 21 RPENHTLSVLVDNEPGVLARVIGLFSGRGYNIESLTVSETEHEKH-LSRITIVTRGTPHV 79
Query: 80 LEKLS-VNVTIRFV-KQFEFNV 99
LE++ I V + + V
Sbjct: 80 LEQIKHQLERIVPVHRVVDLTV 101
>gi|241191115|ref|YP_002968509.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241196521|ref|YP_002970076.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|240249507|gb|ACS46447.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240251075|gb|ACS48014.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|295794104|gb|ADG33639.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis V9]
Length = 777
Score = 37.3 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LN++L + +
Sbjct: 693 DRPHLLSDVTRVLSDHGVNILSGTIATGSDRVATSQFSFEMADPGHLNTLLSAVRKIDGV 752
Query: 90 RFV 92
V
Sbjct: 753 FDV 755
>gi|254468176|ref|ZP_05081582.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [beta
proteobacterium KB13]
gi|207086986|gb|EDZ64269.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [beta
proteobacterium KB13]
Length = 729
Score = 37.3 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 9/91 (9%), Positives = 31/91 (34%), Gaps = 8/91 (8%)
Query: 15 INFDVDIGRLMIC-----IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--IS 67
++ + + + I+ ++ G++ + +++ E NI S
Sbjct: 635 VDVEWEPNPDRLFKVKLDILVSNERGVLAKIASVIAEMESNIDKLTTEESDGGGFTSIHF 694
Query: 68 FLCIDGSIL-NSVLEKLSVNVTIRFVKQFEF 97
+ + I ++ L + + +F+
Sbjct: 695 LIEVKSRIHLADIIRNLRKIEQVSRITRFKL 725
>gi|148241822|ref|YP_001226979.1| homoserine dehydrogenase [Synechococcus sp. RCC307]
gi|147850132|emb|CAK27626.1| Homoserine dehydrogenase [Synechococcus sp. RCC307]
Length = 436
Score = 37.3 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLEKLSVNVTI 89
D G++ +G+ G G+++ ++ + I + ++ S+ L + +
Sbjct: 367 DRPGVIGHIGSCFGSAGVSLQSIVQFETEGSGAEIVVVTHAVEESLFQQALSAILERPEV 426
Query: 90 RFVK 93
V+
Sbjct: 427 EDVR 430
>gi|296121448|ref|YP_003629226.1| acetolactate synthase, small subunit [Planctomyces limnophilus
DSM 3776]
gi|296013788|gb|ADG67027.1| acetolactate synthase, small subunit [Planctomyces limnophilus
DSM 3776]
Length = 202
Score = 37.3 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ + + G++ + +L NI +G ++ + + + D +++ V +
Sbjct: 24 HVLSAMVMNQPGVLAHISGMLASRAFNIESLAVGETERPDFSRITFVVAGDNKVVDQVRK 83
Query: 82 KLSVNVTIRFV 92
+L VT+ V
Sbjct: 84 QLEKIVTVVKV 94
>gi|312128370|ref|YP_003993244.1| acetolactate synthase, small subunit [Caldicellulosiruptor
hydrothermalis 108]
gi|312623191|ref|YP_004024804.1| acetolactate synthase, small subunit [Caldicellulosiruptor
kronotskyensis 2002]
gi|312793996|ref|YP_004026919.1| acetolactate synthase, small subunit [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312877601|ref|ZP_07737559.1| acetolactate synthase, small subunit [Caldicellulosiruptor
lactoaceticus 6A]
gi|311778389|gb|ADQ07875.1| acetolactate synthase, small subunit [Caldicellulosiruptor
hydrothermalis 108]
gi|311795611|gb|EFR11982.1| acetolactate synthase, small subunit [Caldicellulosiruptor
lactoaceticus 6A]
gi|312181136|gb|ADQ41306.1| acetolactate synthase, small subunit [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312203658|gb|ADQ46985.1| acetolactate synthase, small subunit [Caldicellulosiruptor
kronotskyensis 2002]
Length = 170
Score = 37.3 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +G ++ + + + D I+ V +
Sbjct: 3 YTLSVLVENHPGVLSRVAGLFSRRGFNIDSLAVGVTEDPTISRMTIVVNGDDYIVEQVTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + +K+
Sbjct: 63 QLNKLIDVIKIKKLN 77
>gi|116643256|gb|ABK06436.1| flag-tagged protein kinase domain of putative mitogen-activated
protein kinase kinase kinase [synthetic construct]
Length = 557
Score = 37.3 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 37/105 (35%), Gaps = 19/105 (18%)
Query: 8 RFIK-IQEINFDVDIGR---LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ ++ + + + + I D ++ + ++LGE G+NI H S
Sbjct: 154 KIVEDVDSV-VNATLSTRPMHEITFSTIDKPKLLSQLTSLLGELGLNIQEAHAF-STVDG 211
Query: 64 HAISFLCIDG-----------SILNSVLEKLSVNVTIRFVKQFEF 97
++ +DG ++ +L KL + K F
Sbjct: 212 FSLDVFVVDGWSQEETDGLRDALSKEIL-KLKDQPGSKQ-KSISF 254
>gi|62320795|dbj|BAD93724.1| putative protein kinase [Arabidopsis thaliana]
Length = 546
Score = 37.3 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 37/105 (35%), Gaps = 19/105 (18%)
Query: 8 RFIK-IQEINFDVDIGR---LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ ++ + + + + I D ++ + ++LGE G+NI H S
Sbjct: 154 KIVEDVDSV-VNATLSTRPMHEITFSTIDKPKLLSQLTSLLGELGLNIQEAHAF-STVDG 211
Query: 64 HAISFLCIDG-----------SILNSVLEKLSVNVTIRFVKQFEF 97
++ +DG ++ +L KL + K F
Sbjct: 212 FSLDVFVVDGWSQEETDGLRDALSKEIL-KLKDQPGSKQ-KSISF 254
>gi|15227883|ref|NP_179361.1| protein kinase family protein [Arabidopsis thaliana]
gi|17979171|gb|AAL49781.1| putative protein kinase [Arabidopsis thaliana]
gi|20465915|gb|AAM20110.1| putative protein kinase [Arabidopsis thaliana]
gi|330251576|gb|AEC06670.1| ACT-like protein tyrosine kinase-like protein [Arabidopsis
thaliana]
Length = 546
Score = 37.3 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 37/105 (35%), Gaps = 19/105 (18%)
Query: 8 RFIK-IQEINFDVDIGR---LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ ++ + + + + I D ++ + ++LGE G+NI H S
Sbjct: 154 KIVEDVDSV-VNATLSTRPMHEITFSTIDKPKLLSQLTSLLGELGLNIQEAHAF-STVDG 211
Query: 64 HAISFLCIDG-----------SILNSVLEKLSVNVTIRFVKQFEF 97
++ +DG ++ +L KL + K F
Sbjct: 212 FSLDVFVVDGWSQEETDGLRDALSKEIL-KLKDQPGSKQ-KSISF 254
>gi|326492369|dbj|BAK01968.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 499
Score = 37.3 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I D ++ + +LGE G+NI H S + +++ + G ++ +
Sbjct: 202 HEITFSTIDKPKLLSELTCLLGEIGLNIQEAHAF-STNDGYSLDVFVVVGWHAEETVDLI 260
Query: 84 SVNV 87
Sbjct: 261 EELK 264
>gi|312134407|ref|YP_004001745.1| acetolactate synthase, small subunit [Caldicellulosiruptor
owensensis OL]
gi|311774458|gb|ADQ03945.1| acetolactate synthase, small subunit [Caldicellulosiruptor
owensensis OL]
Length = 170
Score = 37.3 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +G ++ + + + D I+ V +
Sbjct: 3 YTLSVLVENHPGVLSRVAGLFSRRGFNIDSLAVGVTEDPTISRMTIVVNGDDYIVEQVTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + +K+
Sbjct: 63 QLNKLIDVIKIKKLN 77
>gi|288930985|ref|YP_003435045.1| phosphoserine phosphatase SerB [Ferroglobus placidus DSM 10642]
gi|288893233|gb|ADC64770.1| phosphoserine phosphatase SerB [Ferroglobus placidus DSM 10642]
Length = 391
Score = 37.3 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 25/62 (40%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I I+ D +GIV V IL ++GINI L + + + V ++L
Sbjct: 92 YQITIIGRDRVGIVRDVTKILYQHGINIEKTSLTARDQLISITFVVDVREADPEKVKKQL 151
Query: 84 SV 85
Sbjct: 152 KE 153
>gi|237785820|ref|YP_002906525.1| acetolactate synthase 3 regulatory subunit [Corynebacterium
kroppenstedtii DSM 44385]
gi|237758732|gb|ACR17982.1| acetolactate synthase small subunit [Corynebacterium
kroppenstedtii DSM 44385]
Length = 165
Score = 37.3 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCIDGSILNSVLE 81
+ ++ D GIV + + NI G + + D + + +
Sbjct: 3 HTLSLLVEDQPGIVARLSGMFARRSFNIISMTTGTTDLEGVNRITIVVETDEVSIEQITK 62
Query: 82 KLSVNVTIRFV 92
+L+ V + V
Sbjct: 63 QLNKLVPVLKV 73
>gi|94265180|ref|ZP_01288942.1| RelA/SpoT protein [delta proteobacterium MLMS-1]
gi|93454321|gb|EAT04628.1| RelA/SpoT protein [delta proteobacterium MLMS-1]
Length = 723
Score = 37.3 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG-SILNSVLEKLSVNVTIR 90
+ G++ + N + NIA ++ L ++G L +L+ + I
Sbjct: 659 NRKGLLAALSNTITSDDANIASLEASSGKNGARFKIVLEVNGIDHLQRILQHIRQIDGIN 718
Query: 91 FVKQF 95
+
Sbjct: 719 EAHRL 723
>gi|15606196|ref|NP_213573.1| (p)ppGpp 3-pyrophosphohydrolase [Aquifex aeolicus VF5]
gi|6647846|sp|O67012|SPOT_AQUAE RecName: Full=Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase; AltName: Full=Penta-phosphate
guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
gi|2983390|gb|AAC06975.1| (p)ppGpp 3-pyrophosphohydrolase [Aquifex aeolicus VF5]
Length = 696
Score = 37.3 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 28 IVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVN 86
+V +D +G++ + ++ E G NI + R + + L +++K+
Sbjct: 626 VVASDRIGLLSDITKVISESGSNIVSSMTNTREGKAVMDFTVEVKNKEHLEKIMKKIKSV 685
Query: 87 VTIRFVKQF 95
++ K+
Sbjct: 686 EGVKICKRL 694
>gi|159903771|ref|YP_001551115.1| acetolactate synthase 3 regulatory subunit [Prochlorococcus
marinus str. MIT 9211]
gi|159888947|gb|ABX09161.1| Acetolactate synthase small subunit [Prochlorococcus marinus str.
MIT 9211]
Length = 176
Score = 37.3 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G +++ + + D L + +
Sbjct: 3 HTLSVLVEDQSGALSRISGLFARRGFNIESLAVGPAEAKGISRLTMVVEGDEETLQQMTK 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLDKLVNVLNV 73
>gi|146276884|ref|YP_001167043.1| homoserine dehydrogenase [Rhodobacter sphaeroides ATCC 17025]
gi|145555125|gb|ABP69738.1| homoserine dehydrogenase [Rhodobacter sphaeroides ATCC 17025]
Length = 428
Score = 37.3 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D G + + LG+ GI+I HA + + + + +S
Sbjct: 357 DKPGALAKIATALGDAGISIDRMRQYGHA-GGHAPVLIVTHKATRDDISHAISQFGAT 413
>gi|288932508|ref|YP_003436568.1| acetolactate synthase, small subunit [Ferroglobus placidus DSM
10642]
gi|288894756|gb|ADC66293.1| acetolactate synthase, small subunit [Ferroglobus placidus DSM
10642]
Length = 161
Score = 37.3 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
+ + + G++ V + G NI +G ++ + + + +DG V +
Sbjct: 3 HTLAALVENKPGVLAKVAGLFRRRGFNIESLAVGITEKPQISRMTIVVDGDDKTIEQVTK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 63 QLNKLIEVLKV 73
>gi|300691685|ref|YP_003752680.1| homoserine dehydrogenase [Ralstonia solanacearum PSI07]
gi|299078745|emb|CBJ51405.1| homoserine dehydrogenase [Ralstonia solanacearum PSI07]
Length = 439
Score = 37.3 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 5/72 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVNV 87
D G++ + IL + GI+I S+ E + + ++ + + +
Sbjct: 365 DETGVLADITRILADAGISIDAMLQKESREDEPQTDIIMLSHVVVEKQVNAAIAAIEALP 424
Query: 88 TIRF-VKQFEFN 98
T+ V +
Sbjct: 425 TVLSKVTRLRME 436
>gi|6320925|ref|NP_011004.1| Ser3p [Saccharomyces cerevisiae S288c]
gi|731484|sp|P40054|SERA_YEAST RecName: Full=D-3-phosphoglycerate dehydrogenase 1; Short=3-PGDH 1
gi|603319|gb|AAB64636.1| Yer081wp [Saccharomyces cerevisiae]
gi|151944798|gb|EDN63057.1| 3-phosphoglycerate dehydrogenase [Saccharomyces cerevisiae YJM789]
gi|190405645|gb|EDV08912.1| 3-phosphoglycerate dehydrogenase [Saccharomyces cerevisiae RM11-1a]
gi|256271443|gb|EEU06497.1| Ser3p [Saccharomyces cerevisiae JAY291]
gi|259145999|emb|CAY79259.1| Ser3p [Saccharomyces cerevisiae EC1118]
gi|285811714|tpg|DAA07742.1| TPA: Ser3p [Saccharomyces cerevisiae S288c]
gi|323305254|gb|EGA59001.1| Ser3p [Saccharomyces cerevisiae FostersB]
gi|323309409|gb|EGA62626.1| Ser3p [Saccharomyces cerevisiae FostersO]
gi|323333765|gb|EGA75156.1| Ser3p [Saccharomyces cerevisiae AWRI796]
gi|323348896|gb|EGA83133.1| Ser3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 469
Score = 37.3 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSILNSVLE 81
+ ++ ++ G++ V +IL + NI + E A +D S + + E
Sbjct: 399 RVLYIHQNVPGVLKTVNDILSNH--NIEKQFS--DSNGEIAYLMADISSVDQSDIKDIYE 454
Query: 82 KLSVNVTIRFVKQF 95
+L+ ++
Sbjct: 455 QLNQTSAKISIRLL 468
>gi|288941837|ref|YP_003444077.1| Homoserine dehydrogenase [Allochromatium vinosum DSM 180]
gi|288897209|gb|ADC63045.1| Homoserine dehydrogenase [Allochromatium vinosum DSM 180]
Length = 438
Score = 37.3 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SV 79
+ + D G++ + +ILGE GI+I + E ++ + + ++ +
Sbjct: 355 YYLRLTALDRPGVMARIASILGEEGISIEAIKQKAPATGETQVTLVMLTHRVIEGRMNTA 414
Query: 80 LEKLSVNVTI 89
+ ++ ++
Sbjct: 415 IARIEALDSV 424
>gi|37520705|ref|NP_924082.1| acetolactate synthase 3 regulatory subunit [Gloeobacter violaceus
PCC 7421]
gi|35211700|dbj|BAC89077.1| acetolactate synthase small subunit [Gloeobacter violaceus PCC
7421]
Length = 175
Score = 37.3 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G + + + G NI +G ++ + + + D + + +
Sbjct: 3 HTLSVLVEDEAGALTRIAGMFARRGFNIESLAVGSAEQSGTTRITMVVAGDEQAVEQITK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 63 QLHKLINVLRVQDIT 77
>gi|241761429|ref|ZP_04759517.1| (p)ppGpp synthetase I, SpoT/RelA [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|241374336|gb|EER63833.1| (p)ppGpp synthetase I, SpoT/RelA [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 721
Score = 37.3 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 24/79 (30%), Gaps = 8/79 (10%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN- 77
+ + + ++ + G + V I G + NI + L + + + +
Sbjct: 636 AEGATVRLKVIVKNQAGALGVVATIFGAHKANIINLVLA---DRDENFHVFNVTLEVRDL 692
Query: 78 ----SVLEKLSVNVTIRFV 92
+L L +
Sbjct: 693 QHLMRILAALRAAGGVVQA 711
>gi|209964801|ref|YP_002297716.1| guanosine polyphosphate phosphohydrolase [Rhodospirillum centenum
SW]
gi|209958267|gb|ACI98903.1| guanosine polyphosphate phosphohydrolase [Rhodospirillum centenum
SW]
Length = 733
Score = 37.3 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN---SVLE 81
I +V A+ G + + ++G+ G NI + + + ID + +++
Sbjct: 658 RISVVVANEPGALGTLTTVIGKNGGNITNLKFTSRSP-DFFEMLIDIDVHDVKHLTNIMA 716
Query: 82 KLSVNVTIRFV 92
L I V
Sbjct: 717 ALRAMPVINSV 727
>gi|167645692|ref|YP_001683355.1| (p)ppGpp synthetase I SpoT/RelA [Caulobacter sp. K31]
gi|167348122|gb|ABZ70857.1| (p)ppGpp synthetase I, SpoT/RelA [Caulobacter sp. K31]
Length = 705
Score = 37.3 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 8/73 (10%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS-----V 79
+ + G++ V I+GE G NI + + QS + ID + ++ +
Sbjct: 631 RLHATIGNAPGVLGQVCTIIGEAGGNIVNLRMHHRQSD---FFDVDIDVEVRDAKHLTNI 687
Query: 80 LEKLSVNVTIRFV 92
L T+ V
Sbjct: 688 SAALRTCPTVETV 700
>gi|30250294|ref|NP_842364.1| homoserine dehydrogenase [Nitrosomonas europaea ATCC 19718]
gi|30181089|emb|CAD86281.1| Homoserine dehydrogenase:ACT domain [Nitrosomonas europaea ATCC
19718]
Length = 438
Score = 37.3 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 27/88 (30%), Gaps = 8/88 (9%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
+ + + + D G++ + IL + I+I E ++ + +
Sbjct: 346 VPMEAVETAYYLRLQVLDKPGVLADITRILADNHISINAMIQKEHADKEDKVNIIMLLHK 405
Query: 75 ILNS----VLEKLSVNVT----IRFVKQ 94
+EK+ I ++
Sbjct: 406 TREKNVNTAIEKIQNLPAMTDKIIRIRL 433
>gi|294495512|ref|YP_003542005.1| acetolactate synthase, small subunit [Methanohalophilus mahii DSM
5219]
gi|292666511|gb|ADE36360.1| acetolactate synthase, small subunit [Methanohalophilus mahii DSM
5219]
Length = 161
Score = 37.3 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + G NI +G ++ + L + D ++ V +
Sbjct: 3 HTLAVLVENKFGVLSRVAGLFARRGYNIDSLAVGVTEDPNVSRMTLVVRGDDHVVEQVSK 62
Query: 82 KLSVNVTIRFVKQF 95
+L+ + + V
Sbjct: 63 QLNKLIDVIRVTDL 76
>gi|163731568|ref|ZP_02139015.1| acetolactate synthase 3 small subunit [Roseobacter litoralis Och
149]
gi|161395022|gb|EDQ19344.1| acetolactate synthase 3 small subunit [Roseobacter litoralis Och
149]
Length = 186
Score = 37.3 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + ++ + G++ V + G NI + T H +S + I S V+E
Sbjct: 27 ERHTLAVLVENEPGVLARVIGLFAGRGYNIDSLTVAEVDETGH-LSRITIVTSGTPQVIE 85
Query: 82 KLSV-NVTIRFVKQFE 96
++ I V
Sbjct: 86 QIKAQLGRIVSVHDVH 101
>gi|319789171|ref|YP_004150804.1| homoserine dehydrogenase [Thermovibrio ammonificans HB-1]
gi|317113673|gb|ADU96163.1| homoserine dehydrogenase [Thermovibrio ammonificans HB-1]
Length = 431
Score = 37.3 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE-KLS 84
+ D G++ + +ILG++ I+I L +S + + + + +
Sbjct: 349 LRFTALDRPGVLAKIASILGKHNISI-KMALQKSIEFDGGVPVVMTTHPAPKKAISLAIK 407
Query: 85 VNVT 88
Sbjct: 408 EIDA 411
>gi|311114509|ref|YP_003985730.1| GTP diphosphokinase [Gardnerella vaginalis ATCC 14019]
gi|310946003|gb|ADP38707.1| GTP diphosphokinase [Gardnerella vaginalis ATCC 14019]
Length = 779
Score = 37.3 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + +F D LN++L + +
Sbjct: 697 DRQHLLSDVTRVLSDHGVNILSGTIATGDDRVATSQFTFEMADPQHLNTLLAAIRKIDGV 756
Query: 90 RFV 92
V
Sbjct: 757 FDV 759
>gi|72382541|ref|YP_291896.1| homoserine dehydrogenase [Prochlorococcus marinus str. NATL2A]
gi|72002391|gb|AAZ58193.1| homoserine dehydrogenase [Prochlorococcus marinus str. NATL2A]
Length = 438
Score = 37.3 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLEKLSV 85
++ D G++ +G I G+ I+I ++ + I + I+ L L +
Sbjct: 365 LIAEDSPGVIGEIGTIFGKKKISIESIVQFDAKDKKAEIVVITHKINQGQLEEALLDIEN 424
Query: 86 NVTIRFV 92
++ +
Sbjct: 425 LPQVKRI 431
>gi|295109042|emb|CBL22995.1| ACT domain-containing protein [Ruminococcus obeum A2-162]
Length = 150
Score = 37.3 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 5/82 (6%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID----G 73
+ + I D GI+ V + + NI H A L +D
Sbjct: 67 ETRGKTITFIIQMDDEPGILSVVLQAIAHFHGNILTIHQSI-PINGIATLTLSVDILPGE 125
Query: 74 SILNSVLEKLSVNVTIRFVKQF 95
+++E++ I ++K
Sbjct: 126 GDAEAMIEEIESQEGIHYLKIL 147
>gi|291558929|emb|CBL37729.1| ACT domain-containing protein [butyrate-producing bacterium SSC/2]
Length = 146
Score = 37.3 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVL 80
I D G++ + NI Y NI H + + +D +++
Sbjct: 70 TFVIEVDDQPGVMASILNIFALYKANILTIHQSI-PINGKGLLTVSVDIEDSETDVSAMI 128
Query: 81 EKLSVNVTIRFVKQFEFN 98
+ + + +VK
Sbjct: 129 QDVEKIEDVSYVKIIAME 146
>gi|253577263|ref|ZP_04854582.1| acetolactate synthase, small subunit [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251843377|gb|EES71406.1| acetolactate synthase, small subunit [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 162
Score = 37.3 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ D G++ V + G G NI +G+S+ + + D L + +
Sbjct: 6 HAISVLVNDQPGVLQRVAGLFGRRGFNIESITVGQSEEAGLSRMIIVTQGDDKTLEQIEK 65
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 66 QLYKLIDVIKV 76
>gi|254429317|ref|ZP_05043024.1| RelA/SpoT family protein [Alcanivorax sp. DG881]
gi|196195486|gb|EDX90445.1| RelA/SpoT family protein [Alcanivorax sp. DG881]
Length = 724
Score = 37.3 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 29/89 (32%), Gaps = 14/89 (15%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R DV + D G++ V +L +N+ H Q A
Sbjct: 643 RIT----YPVDV-------FLRAWDRQGLLKDVIAVLANEKVNVTAVHTQSHQDDNTATM 691
Query: 68 FLCIDGSILN---SVLEKLSVNVTIRFVK 93
L ++ + L VL K+ + V+
Sbjct: 692 LLTLEIATLGNLGKVLAKMDQLKGVLEVR 720
>gi|116327046|ref|YP_796766.1| homoserine dehydrogenase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332295|ref|YP_802013.1| homoserine dehydrogenase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116119790|gb|ABJ77833.1| Homoserine dehydrogenase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116125984|gb|ABJ77255.1| Homoserine dehydrogenase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 429
Score = 37.3 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ R + D+ G++ + +LG++GI+I+ + ++++ + +
Sbjct: 339 ISEANGFLV-----RYYLRFTTVDLPGVLSEISKVLGDHGISISS--VRQNEAEKEPVEV 391
Query: 69 LCIDGSILNSVLEKLSVN 86
+ I ++K
Sbjct: 392 VVITHPATEENIKKSLKI 409
>gi|148239980|ref|YP_001225367.1| acetolactate synthase 3 regulatory subunit [Synechococcus sp. WH
7803]
gi|147848519|emb|CAK24070.1| Acetolactate synthase small subunit [Synechococcus sp. WH 7803]
Length = 176
Score = 37.3 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G +++ + + D L + +
Sbjct: 3 HTLSVLVEDESGALSRIAGLFARRGFNIDSLAVGPAEADGRSRLTMVVEGDQQTLQQMTK 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLDKLVNVLQV 73
>gi|254502186|ref|ZP_05114337.1| RelA/SpoT family protein [Labrenzia alexandrii DFL-11]
gi|222438257|gb|EEE44936.1| RelA/SpoT family protein [Labrenzia alexandrii DFL-11]
Length = 746
Score = 37.3 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEK 82
+ I A+ G + + ++GE NI + + + H + L + D LN ++ +
Sbjct: 672 RLDISAANEPGSLATIAQVIGENSGNIDNVKMLQRAPDFHQMLIDLEVWDLKHLNRIINQ 731
Query: 83 LSVNVTIRFVKQFE 96
L + V +
Sbjct: 732 LRSKPNVSSVSRVN 745
>gi|89098920|ref|ZP_01171800.1| acetolactate synthase small subunit [Bacillus sp. NRRL B-14911]
gi|89086324|gb|EAR65445.1| acetolactate synthase small subunit [Bacillus sp. NRRL B-14911]
Length = 163
Score = 37.3 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLSVNV 87
+ G++ + N+ + NI +G S+ + + + + ++L+ +
Sbjct: 1 MNRPGVLNRITNLFSKRNFNIESISVGHSEQEGISRITCTVHVDNEEAAEQIAKQLNKQI 60
Query: 88 TIRFVKQFE 96
I V
Sbjct: 61 DILKVNDIS 69
>gi|292490853|ref|YP_003526292.1| homoserine dehydrogenase [Nitrosococcus halophilus Nc4]
gi|291579448|gb|ADE13905.1| Homoserine dehydrogenase [Nitrosococcus halophilus Nc4]
Length = 436
Score = 37.3 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 33/93 (35%), Gaps = 5/93 (5%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+I ++ + + + D G++ V + G+ I+I + E+ + +
Sbjct: 341 EIPILSMEEVKTAYYLRMRAVDRPGVLAEVTRVFGDQSISIEAILQKEPAAGENHVPIII 400
Query: 71 IDGSILN----SVLEKLSVNVTIR-FVKQFEFN 98
+ +L + ++ +I V +
Sbjct: 401 LTQPVLERNMNEAIRRIEALKSIEGSVTRIRLE 433
>gi|147921390|ref|YP_684796.1| acetolactate synthase, small subunit [uncultured methanogenic
archaeon RC-I]
gi|110620192|emb|CAJ35470.1| acetolactate synthase, small subunit [uncultured methanogenic
archaeon RC-I]
Length = 173
Score = 37.3 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTI 89
+ G++ V + G NI +G +++ + + + + D ++ V ++L+ + I
Sbjct: 19 NKPGVLTHVSGLFSRRGYNIDSLTVGVTENPDISRMTIVVHGDEQVIEQVTKQLNKLIDI 78
Query: 90 RFV 92
V
Sbjct: 79 IKV 81
>gi|90407358|ref|ZP_01215543.1| Prephenate dehydrotase (pheA) [Psychromonas sp. CNPT3]
gi|90311509|gb|EAS39609.1| Prephenate dehydrotase (pheA) [Psychromonas sp. CNPT3]
Length = 274
Score = 37.3 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 5/74 (6%)
Query: 24 LMICIVN-ADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ + N D G++ + N +N+ F+ IDG + ++
Sbjct: 194 TTLVVKNDNDCPGVLGNIINAFAAQKVNLTSIMSRPTKSQFGQYHFFIDIDGHQQDENIK 253
Query: 82 -KLSVN--VTIRFV 92
+ + V
Sbjct: 254 LAILNIKNDHVIRV 267
>gi|54309599|ref|YP_130619.1| transcriptional regulator TyrR [Photobacterium profundum SS9]
gi|46914037|emb|CAG20817.1| hypothetical transcriptional regulator TyrR [Photobacterium
profundum SS9]
Length = 511
Score = 37.3 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL IN+ + R + + + ++ ++ +
Sbjct: 8 EDRLGMTRELLDILASQEINLRGIEIDRIGIIYLNCPEIEFEQF--SQLMSQIRQLDGVT 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|170726071|ref|YP_001760097.1| transcriptional regulator TyrR [Shewanella woodyi ATCC 51908]
gi|169811418|gb|ACA86002.1| transcriptional regulator, TyrR [Shewanella woodyi ATCC 51908]
Length = 512
Score = 37.3 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D +G+ + IL YGIN+ + F ++ L+ +L + +
Sbjct: 9 DRVGLAKDILMILEGYGINLLAIDASNQ--GFLYLQFAEVNFDTLSELLPLIRKVEGVHD 66
Query: 92 VKQFEF 97
V+ F
Sbjct: 67 VRTVSF 72
>gi|108803854|ref|YP_643791.1| CBS domain-containing protein [Rubrobacter xylanophilus DSM 9941]
gi|108765097|gb|ABG03979.1| CBS domain containing membrane protein [Rubrobacter xylanophilus
DSM 9941]
Length = 216
Score = 37.3 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 5/73 (6%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS---TEHA--ISFLCIDGSILN 77
+ ++ D G + V I GE GINI G Q + ++ +D +
Sbjct: 137 GSRLEVLMPDRPGSLAGVAGIFGELGINIVSVATGPRQKFPDGDTPGRVAVFRVDTIDPS 196
Query: 78 SVLEKLSVNVTIR 90
+E L +
Sbjct: 197 RAIEVLRRAGYVV 209
>gi|115398153|ref|XP_001214668.1| acetolactate synthase small subunit, mitochondrial precursor
[Aspergillus terreus NIH2624]
gi|114192859|gb|EAU34559.1| acetolactate synthase small subunit, mitochondrial precursor
[Aspergillus terreus NIH2624]
Length = 323
Score = 37.3 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ V IL G NI + ++ + + + + G + V
Sbjct: 89 PPKRHVLNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVEDLSRMTIVLQGQ--DGV 146
Query: 80 LEK 82
+E+
Sbjct: 147 VEQ 149
>gi|87307054|ref|ZP_01089200.1| probable acetolactate synthase small subunit [Blastopirellula
marina DSM 3645]
gi|87290427|gb|EAQ82315.1| probable acetolactate synthase small subunit [Blastopirellula
marina DSM 3645]
Length = 162
Score = 37.3 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ V ++ G++ + +L G NI +G + + + D +L V +
Sbjct: 3 HVLSAVVQNVPGVLAHISGMLASRGYNIDSLAVGETDVPNLSRMTFVVVGDDQVLEQVRK 62
Query: 82 KLSVNVTIRFV 92
+L VT+ V
Sbjct: 63 QLEKIVTVVRV 73
>gi|67528464|ref|XP_662034.1| hypothetical protein AN4430.2 [Aspergillus nidulans FGSC A4]
gi|40741005|gb|EAA60195.1| hypothetical protein AN4430.2 [Aspergillus nidulans FGSC A4]
gi|259482756|tpe|CBF77540.1| TPA: acetolactate synthase, regulatory subunit, hypothetical
protein (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 326
Score = 37.3 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ V IL G NI + ++ + + + + G + V
Sbjct: 89 PPKRHVLNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVEDLSRMTIVLQGQ--DGV 146
Query: 80 LEK 82
+E+
Sbjct: 147 VEQ 149
>gi|300868256|ref|ZP_07112886.1| homoserine dehydrogenase [Oscillatoria sp. PCC 6506]
gi|300333738|emb|CBN58070.1| homoserine dehydrogenase [Oscillatoria sp. PCC 6506]
Length = 433
Score = 37.3 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 6/66 (9%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVN 86
D G++ +G G++ +++ + ++ + + + ++++S
Sbjct: 363 KDNPGVIGKLGTCFGQHNVSLES--VVQTGIHGELAEIVVVTHDVKEGNFQQAIDEISQM 420
Query: 87 VTIRFV 92
I +
Sbjct: 421 EGIHSI 426
>gi|217977182|ref|YP_002361329.1| (p)ppGpp synthetase I, SpoT/RelA [Methylocella silvestris BL2]
gi|217502558|gb|ACK49967.1| (p)ppGpp synthetase I, SpoT/RelA [Methylocella silvestris BL2]
Length = 736
Score = 37.3 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 26/71 (36%), Gaps = 5/71 (7%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I + + G + + ++G+ NI + + + ID + + L+ L+
Sbjct: 662 RIVVTVINEPGALGTISTVIGDNDANIDNIVFRPLSAD---FREMTIDVEVND--LKHLN 716
Query: 85 VNVTIRFVKQF 95
++ +
Sbjct: 717 AIISNLRARSV 727
>gi|154495863|ref|ZP_02034559.1| hypothetical protein BACCAP_00143 [Bacteroides capillosus ATCC
29799]
gi|150275061|gb|EDN02109.1| hypothetical protein BACCAP_00143 [Bacteroides capillosus ATCC
29799]
Length = 185
Score = 37.3 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVT 88
+ G++ V + G NI +G + + + + D +++ ++ +L
Sbjct: 16 ENAPGVLSQVSRLFSRKGYNIESLAVGTTDDPAVSRITIEVTSDEAMIEQIMNQLRKLFP 75
Query: 89 IRFVKQF 95
+ V++
Sbjct: 76 VYSVQEL 82
>gi|108804610|ref|YP_644547.1| amino acid-binding ACT [Rubrobacter xylanophilus DSM 9941]
gi|108765853|gb|ABG04735.1| amino acid-binding ACT [Rubrobacter xylanophilus DSM 9941]
Length = 225
Score = 37.3 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 28/80 (35%), Gaps = 5/80 (6%)
Query: 14 EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG 73
++ + + D GI+ + ++ E+ NI + + + + ++
Sbjct: 5 GRQLEIPFA---LVVRAPDQPGILHELTGVIFEHRANITYIDIS-DRRAGECTIYFELEE 60
Query: 74 SILNSVL-EKLSVNVTIRFV 92
VL E L +R V
Sbjct: 61 LSSPEVLVEDLRALPIVREV 80
>gi|312136282|ref|YP_004003619.1| acetolactate synthase, small subunit [Methanothermus fervidus DSM
2088]
gi|311224001|gb|ADP76857.1| acetolactate synthase, small subunit [Methanothermus fervidus DSM
2088]
Length = 163
Score = 36.9 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 33 ILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTIR 90
G++ + + G NI +G S++ E A + + D +L + ++L+ V +
Sbjct: 13 KPGVLQRISGLFTRRGYNIESITVGESENPELARMTIIVKGDEKVLEQITKQLNKLVDVI 72
Query: 91 FVKQF 95
V+
Sbjct: 73 KVRDL 77
>gi|291296287|ref|YP_003507685.1| acetolactate synthase small subunit [Meiothermus ruber DSM 1279]
gi|290471246|gb|ADD28665.1| acetolactate synthase, small subunit [Meiothermus ruber DSM 1279]
Length = 169
Score = 36.9 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ ++ D G++ V ++ G NI +GR+ + L + D ++L V +
Sbjct: 3 HLVSVLVQDNPGVLQRVAGLIARRGFNIESLAVGRTHQPGLSRISLVVSGDDAVLEQVEK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 63 QLNRLIEVIKV 73
>gi|169830408|ref|YP_001716390.1| beta-lactamase domain-containing protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169637252|gb|ACA58758.1| beta-lactamase domain protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 528
Score = 36.9 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQS 61
D G + + +I + +NI FH RS+
Sbjct: 28 DRPGSLAALASIFASHNVNITSFHYNRSEH 57
>gi|121996934|ref|YP_001001721.1| homoserine dehydrogenase [Halorhodospira halophila SL1]
gi|121588339|gb|ABM60919.1| homoserine dehydrogenase [Halorhodospira halophila SL1]
Length = 436
Score = 36.9 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE-K 82
+ + D G++ V +LG++GI+I + Q+ + + + I ++
Sbjct: 354 YYLRLSARDEPGVLADVTRVLGDFGISIEAIIQKQPQAGAEHVPIILLTHRIHERHMDAA 413
Query: 83 LSVNVTIRFV--KQFEFNVD 100
+ + V + V+
Sbjct: 414 IERLEHLEQVDGRVVRIRVE 433
>gi|291280043|ref|YP_003496878.1| acetolactate synthase small subunit [Deferribacter desulfuricans
SSM1]
gi|290754745|dbj|BAI81122.1| acetolactate synthase, small subunit [Deferribacter desulfuricans
SSM1]
Length = 168
Score = 36.9 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + G++ V + G NI + + ++ + D I+ +++
Sbjct: 3 HIISVLVENKFGVLSRVAGLFSGRGYNIESLSVNTTHDPRFSVMTIVTSGDERIIEQIIK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 63 QLRKLINVIKVRDVT 77
>gi|88809029|ref|ZP_01124538.1| acetolactate synthase III small subunit [Synechococcus sp. WH
7805]
gi|88786971|gb|EAR18129.1| acetolactate synthase III small subunit [Synechococcus sp. WH
7805]
Length = 176
Score = 36.9 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G +++ + + D L + +
Sbjct: 3 HTLSVLVEDESGALSRIAGLFARRGFNIDSLAVGPAEADGRSRLTMVVEGDQQTLQQMTK 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLDKLVNVLQV 73
>gi|256380149|ref|YP_003103809.1| homoserine dehydrogenase [Actinosynnema mirum DSM 43827]
gi|255924452|gb|ACU39963.1| Homoserine dehydrogenase [Actinosynnema mirum DSM 43827]
Length = 437
Score = 36.9 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R I + D G++ V + E+G++IA + + A + + ++
Sbjct: 353 TPTRYHISLDVEDKPGVLAQVAAVFAEHGVSIAA--VRQEGRVADASLVIVTHAATDAAL 410
Query: 80 LEKLSVNVTIRFVK 93
+ + V+
Sbjct: 411 RSTVDKVGGLPIVR 424
>gi|17987579|ref|NP_540213.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Brucella
melitensis bv. 1 str. 16M]
gi|17983284|gb|AAL52477.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Brucella
melitensis bv. 1 str. 16M]
Length = 760
Score = 36.9 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + + I NI + + R+ + + + D LN ++
Sbjct: 686 RISVSAINSPGSLAEIAQIAAANDANIHNLSMVRTAP-DFTEMIIDVEVWDLKHLNRIIS 744
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 745 QLKESASVSSAKRVN 759
>gi|22298423|ref|NP_681670.1| acetolactate synthase 3 regulatory subunit [Thermosynechococcus
elongatus BP-1]
gi|22294602|dbj|BAC08432.1| acetolactate synthase small subunit [Thermosynechococcus
elongatus BP-1]
Length = 172
Score = 36.9 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + D +++ + +
Sbjct: 3 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQIGISRITMVVPGDDAVIEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 63 QLYKLINVLKVQDIT 77
>gi|254718794|ref|ZP_05180605.1| RelA/SpoT family protein [Brucella sp. 83/13]
gi|265983775|ref|ZP_06096510.1| GTP pyrophosphokinase [Brucella sp. 83/13]
gi|306837514|ref|ZP_07470389.1| RelA/SpoT family protein [Brucella sp. NF 2653]
gi|264662367|gb|EEZ32628.1| GTP pyrophosphokinase [Brucella sp. 83/13]
gi|306407406|gb|EFM63610.1| RelA/SpoT family protein [Brucella sp. NF 2653]
Length = 750
Score = 36.9 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + + I NI + + R+ + + + D LN ++
Sbjct: 676 RISVSAINSPGSLAEIAQIAAANDANIHNLSMVRTAP-DFTEMIIDVEVWDLKHLNRIIS 734
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 735 QLKESASVSSAKRVN 749
>gi|225627154|ref|ZP_03785192.1| RelA/SpoT family protein [Brucella ceti str. Cudo]
gi|225617989|gb|EEH15033.1| RelA/SpoT family protein [Brucella ceti str. Cudo]
Length = 760
Score = 36.9 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + + I NI + + R+ + + + D LN ++
Sbjct: 686 RISVSAINSPGSLAEIAQIAAANDANIHNLSMVRTAP-DFTEMIIDVEVWDLKHLNRIIS 744
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 745 QLKESASVSSAKRVN 759
>gi|225574297|ref|ZP_03782907.1| hypothetical protein RUMHYD_02361 [Blautia hydrogenotrophica DSM
10507]
gi|225038519|gb|EEG48765.1| hypothetical protein RUMHYD_02361 [Blautia hydrogenotrophica DSM
10507]
Length = 143
Score = 36.9 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ + D G + LG+ GINI + + ++ A ++ ++ L
Sbjct: 72 LAVEIPDTPGGLAGAIRALGDEGINIEYMYAFITKRKNVAYVIFRVED--NERAIKALLA 129
>gi|254430406|ref|ZP_05044109.1| homoserine dehydrogenase:ACT domain [Cyanobium sp. PCC 7001]
gi|197624859|gb|EDY37418.1| homoserine dehydrogenase:ACT domain [Cyanobium sp. PCC 7001]
Length = 449
Score = 36.9 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 26/74 (35%), Gaps = 12/74 (16%)
Query: 31 ADILGIVVFVGNILGEYGINIAHF-------HLGRSQSTEHA-ISFLCIDGSILNS---- 78
D G++ +G G+ G++I + + +A + + +L +
Sbjct: 369 RDEAGVIGKIGTCFGDAGVSIRSIVQFAAHDFAAQDKDGGNADAEIVVVTHEVLEADFRR 428
Query: 79 VLEKLSVNVTIRFV 92
L ++ + V
Sbjct: 429 ALARIEALPEVESV 442
>gi|163814889|ref|ZP_02206277.1| hypothetical protein COPEUT_01040 [Coprococcus eutactus ATCC 27759]
gi|158449828|gb|EDP26823.1| hypothetical protein COPEUT_01040 [Coprococcus eutactus ATCC 27759]
Length = 814
Score = 36.9 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 7/81 (8%)
Query: 18 DVDIGRLMIC---IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--- 71
D + I D GI+ + IL E IN+ + R+ A +
Sbjct: 730 DAVAEGTYMTEINIYADDRNGILFDITKILSEANINVNSIN-SRTSKQGKATITISFAIK 788
Query: 72 DGSILNSVLEKLSVNVTIRFV 92
LN+++ K+ +I +
Sbjct: 789 SKEQLNTIIAKIRNVDSIIDI 809
>gi|319957581|ref|YP_004168844.1| homoserine dehydrogenase [Nitratifractor salsuginis DSM 16511]
gi|319419985|gb|ADV47095.1| homoserine dehydrogenase [Nitratifractor salsuginis DSM 16511]
Length = 420
Score = 36.9 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLSVNVT 88
D G++ V + LGE+GI+I S+ + + + +E L
Sbjct: 349 DEPGVLAKVTSTLGEFGISIESMLQKPSRLADRVRLLFTTHQCEERKMKEAIEALKKLDV 408
Query: 89 I-RFVKQFEFN 98
+ V
Sbjct: 409 VEEKVTMIRIE 419
>gi|310794611|gb|EFQ30072.1| acetolactate synthase [Glomerella graminicola M1.001]
Length = 319
Score = 36.9 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILN 77
R ++ + + G++ V IL G NI + ++ + + + + ++
Sbjct: 81 PPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCSTEVDDLSRMTIVLTGQDGVVE 140
Query: 78 SVLEKLSVN 86
+L
Sbjct: 141 QARRQLEDL 149
>gi|257055218|ref|YP_003133050.1| formyltetrahydrofolate deformylase [Saccharomonospora viridis DSM
43017]
gi|256585090|gb|ACU96223.1| formyltetrahydrofolate deformylase [Saccharomonospora viridis DSM
43017]
Length = 291
Score = 36.9 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 14/73 (19%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIA--HFHLGRSQSTEHAIS------------FLC 70
+ + D GIV V +LGE+G NI S
Sbjct: 12 RLIVQGEDRPGIVASVSRVLGEHGANIVSLDQASSDETSGGRFFQRTVFHLPDLSGKLAD 71
Query: 71 IDGSILNSVLEKL 83
++ ++ +++++L
Sbjct: 72 LNQALEKTLVDEL 84
>gi|254512144|ref|ZP_05124211.1| acetolactate synthase, small subunit [Rhodobacteraceae bacterium
KLH11]
gi|221535855|gb|EEE38843.1| acetolactate synthase, small subunit [Rhodobacteraceae bacterium
KLH11]
Length = 186
Score = 36.9 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R I ++ + G++ V + G NI + T H +S + I + V+E
Sbjct: 27 ERHTIAVLVENEPGVLARVIGLFSGRGYNIESLTVAEVDHTGH-LSRITIVTTGTPQVIE 85
Query: 82 KLSV-NVTIRFVKQFE 96
++ I V+
Sbjct: 86 QIKAQLGRIVSVRDVH 101
>gi|144897588|emb|CAM74452.1| Glycine cleavage system regulatory protein [Magnetospirillum
gryphiswaldense MSR-1]
Length = 170
Score = 36.9 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D G+V + + G++ NI R ++ + + L
Sbjct: 94 HRVIVSGGDRPGLVARLSEVFGQFNANIVRMDAQRVPEQNLYVTRFSV--CLPERAQACL 151
Query: 84 SVNVTI 89
+
Sbjct: 152 ATITNT 157
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKLSVNVTIR 90
D G++ + L + G+N+ + S + D L+ + +L+ +
Sbjct: 12 DRPGLIAAITGRLFDLGVNLGDSSFAMLGAGAEFSSVCEVPDSLALDDLQTELAALPELA 71
Query: 91 FVK 93
+
Sbjct: 72 QAR 74
>gi|312882903|ref|ZP_07742635.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309369422|gb|EFP96942.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 703
Score = 36.9 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 9/85 (10%), Positives = 28/85 (32%), Gaps = 9/85 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI- 71
+ + + + + + G + + N++ + G NI L + + +
Sbjct: 620 DDYDKEFITE---LTVDVQNRQGALAELTNVISKTGSNIHG--LSTEERDGRLYTVTVLL 674
Query: 72 ---DGSILNSVLEKLSVNVTIRFVK 93
D L ++ ++ V+
Sbjct: 675 TTKDRVHLAGIMRRIKAMPQTLRVR 699
>gi|255728449|ref|XP_002549150.1| D-3-phosphoglycerate dehydrogenase 1 [Candida tropicalis MYA-3404]
gi|240133466|gb|EER33022.1| D-3-phosphoglycerate dehydrogenase 1 [Candida tropicalis MYA-3404]
Length = 463
Score = 36.9 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILN--SVLE 81
+ ++ ++ G++ V NIL + NI + A I D I + S+ E
Sbjct: 393 RVLYIHHNVPGVLKTVNNILSNH--NIEKQFS--DSQGDIAYLMADISDVDISDIQSLYE 448
Query: 82 KLSVNVTIRFVKQF 95
+L +
Sbjct: 449 QLEQTPYKIATRLL 462
>gi|152965363|ref|YP_001361147.1| PII uridylyl-transferase [Kineococcus radiotolerans SRS30216]
gi|151359880|gb|ABS02883.1| metal dependent phosphohydrolase [Kineococcus radiotolerans
SRS30216]
Length = 778
Score = 36.9 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 6/74 (8%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
PR + + ++ + AD G++ +G L E GI+I H+ + A
Sbjct: 691 HPRIVILPG----ASERATVLEVRAADRPGLLHALGRALAEEGIDIRSAHVATYAA--QA 744
Query: 66 ISFLCIDGSILNSV 79
+ L + + +
Sbjct: 745 VDVLYLAEASGERL 758
>gi|73541681|ref|YP_296201.1| homoserine dehydrogenase [Ralstonia eutropha JMP134]
gi|72119094|gb|AAZ61357.1| homoserine dehydrogenase [Ralstonia eutropha JMP134]
Length = 436
Score = 36.9 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 31/97 (31%), Gaps = 7/97 (7%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + + + + +D G++ + IL E GI+I L + +
Sbjct: 338 ELSNVPVLPIEEINSAYYLRMRVSDETGVLAEITRILAEGGISIDAM-LQKESREGEPQT 396
Query: 68 FLCIDGSILNS-----VLEKLSVNVTIRF-VKQFEFN 98
+ I + + K+ T+ V +
Sbjct: 397 DIIILTHVTREKHVNAAIAKIESLPTVLSPVTRLRME 433
>gi|313680386|ref|YP_004058125.1| cbs domain containing protein [Oceanithermus profundus DSM 14977]
gi|313153101|gb|ADR36952.1| CBS domain containing protein [Oceanithermus profundus DSM 14977]
Length = 209
Score = 36.9 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
D G + + E G+NI + + L + + ++L
Sbjct: 142 DRPGKLAKLAAFFAERGVNIHSLLTYPDEP-GWVRNVLRVGSLETRKLADELRA 194
>gi|320202427|gb|EFW76997.1| GTP pyrophosphokinase ppGpp synthetase I [Escherichia coli
EC4100B]
Length = 77
Score = 36.9 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG---SILNSVLE 81
M+ +V D G++ + IL +N+ + A + I+ +L VL
Sbjct: 1 MVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLG 60
Query: 82 KLSVNVTIRFVKQFE 96
KL+ + ++
Sbjct: 61 KLNQVPDVIDARRLH 75
>gi|229543716|ref|ZP_04432776.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus coagulans 36D1]
gi|229328136|gb|EEN93811.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus coagulans 36D1]
Length = 729
Score = 36.9 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+E N D++I D G++ V ++ E NI+ GRS + A + I
Sbjct: 650 KEYNVDIEITGY-------DRRGLLNEVLQVVNETKTNISA-VSGRSDRNKMATIIMSIS 701
Query: 73 -GSILN--SVLEKLSVNVTIRFVKQF 95
+I + V+E++ I V++
Sbjct: 702 IQNISHLHRVVERIKHIPDIYSVRRI 727
>gi|87124822|ref|ZP_01080670.1| Homoserine dehydrogenase:ACT domain [Synechococcus sp. RS9917]
gi|86167701|gb|EAQ68960.1| Homoserine dehydrogenase:ACT domain [Synechococcus sp. RS9917]
Length = 440
Score = 36.9 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKL 83
D G++ +G G++G++I + I + + L L +
Sbjct: 370 DDAPGVIGQIGTCFGQHGVSIQSIVQFDASDAGAEIVVITHEVSNGNLEQALAAI 424
>gi|126465857|ref|YP_001040966.1| hypothetical protein Smar_0959 [Staphylothermus marinus F1]
gi|126014680|gb|ABN70058.1| transcriptional regulator, AbrB family [Staphylothermus marinus F1]
Length = 136
Score = 36.9 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-----NSVL 80
+ I D G++ + L + GI+I + E ++ +D S +
Sbjct: 58 LSIRVEDRPGVLAELTRELADRGIDIIATKCIVLKRGEIGECYMVVDLSRSLITNLKELE 117
Query: 81 EKLSVNVTIRFVKQFEFN 98
+ L +R V+ E +
Sbjct: 118 DSLKKLEPVREVRAQEIH 135
>gi|329957750|ref|ZP_08298225.1| acetolactate synthase, small subunit [Bacteroides clarus YIT
12056]
gi|328522627|gb|EGF49736.1| acetolactate synthase, small subunit [Bacteroides clarus YIT
12056]
Length = 186
Score = 36.9 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + + G++ V + INI ++ S + D + V +
Sbjct: 6 YTIIVHSENFAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDTIEKVTK 65
Query: 82 KLSVNVTIRFVKQFE 96
+++ + + F
Sbjct: 66 QITKKIDVLQAHYFT 80
>gi|289208459|ref|YP_003460525.1| homoserine dehydrogenase [Thioalkalivibrio sp. K90mix]
gi|288944090|gb|ADC71789.1| Homoserine dehydrogenase [Thioalkalivibrio sp. K90mix]
Length = 437
Score = 36.9 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 8/71 (11%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVN 86
D G++ + ILGE+GI+I + + + + + L
Sbjct: 361 QDRPGVLADITRILGEHGISIEAILQREPDPERGEATIIMLTHKVREGAMNEAIAALEAL 420
Query: 87 VT----IRFVK 93
I ++
Sbjct: 421 DHLLTPITRIR 431
>gi|256044349|ref|ZP_05447253.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Brucella
melitensis bv. 1 str. Rev.1]
gi|260563701|ref|ZP_05834187.1| GTP pyrophosphokinase [Brucella melitensis bv. 1 str. 16M]
gi|265990764|ref|ZP_06103321.1| GTP pyrophosphokinase [Brucella melitensis bv. 1 str. Rev.1]
gi|172045765|sp|Q8YG65|RSH_BRUME RecName: Full=GTP pyrophosphokinase rsh; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase
gi|260153717|gb|EEW88809.1| GTP pyrophosphokinase [Brucella melitensis bv. 1 str. 16M]
gi|263001548|gb|EEZ14123.1| GTP pyrophosphokinase [Brucella melitensis bv. 1 str. Rev.1]
Length = 750
Score = 36.9 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + + I NI + + R+ + + + D LN ++
Sbjct: 676 RISVSAINSPGSLAEIAQIAAANDANIHNLSMVRTAP-DFTEMIIDVEVWDLKHLNRIIS 734
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 735 QLKESASVSSAKRVN 749
>gi|331082809|ref|ZP_08331931.1| hypothetical protein HMPREF0992_00855 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400138|gb|EGG79787.1| hypothetical protein HMPREF0992_00855 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 147
Score = 36.9 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 9/73 (12%), Positives = 22/73 (30%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I D G++ V + ++ NI H + +++ ++ +
Sbjct: 71 TFIIQMDDEPGLLSAVLRAIAQFHGNILTIHQSIPMNGIASLTLSVAISAVEGDAAAMMD 130
Query: 85 VNVTIRFVKQFEF 97
I V +
Sbjct: 131 NIEHINGVHYLKI 143
>gi|325262048|ref|ZP_08128786.1| GTP diphosphokinase [Clostridium sp. D5]
gi|324033502|gb|EGB94779.1| GTP diphosphokinase [Clostridium sp. D5]
Length = 767
Score = 36.9 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKL 83
+ + D G+++ + I E I++ ++ S+ ++ I V+EKL
Sbjct: 694 LKMFAHDRQGLLLEITKIFTEAKIDVKSMNIRTSKKGTASLDMGFIVHGRDELNRVIEKL 753
Query: 84 SVNVTIRFV 92
+ +
Sbjct: 754 RQIEGVMDI 762
>gi|306845253|ref|ZP_07477829.1| RelA/SpoT family protein [Brucella sp. BO1]
gi|306274412|gb|EFM56219.1| RelA/SpoT family protein [Brucella sp. BO1]
Length = 750
Score = 36.9 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + + I NI + + R+ + + + D LN ++
Sbjct: 676 RISVSAINSPGSLAEIAQIAAANDANIHNLSMVRTAP-DFTEMIIDVEVWDLKHLNRIIS 734
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 735 QLKESASVSSAKRVN 749
>gi|291286459|ref|YP_003503275.1| (p)ppGpp synthetase I, SpoT/RelA [Denitrovibrio acetiphilus DSM
12809]
gi|290883619|gb|ADD67319.1| (p)ppGpp synthetase I, SpoT/RelA [Denitrovibrio acetiphilus DSM
12809]
Length = 718
Score = 36.9 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 14/99 (14%)
Query: 1 VFSDGKPRFIKI-----QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFH 55
VFS R + + + V I + D G++ + +L + G+NI
Sbjct: 623 VFS--NERLVDVQWDDKKNYKMPVKIHANI-----EDRTGMLNSLTTVLKDMGLNILELS 675
Query: 56 LGRSQSTEHAISF-LCIDGSIL-NSVLEKLSVNVTIRFV 92
R + + F + + SV+ KL + V
Sbjct: 676 SKRDKDGTAHLDFSIEVKNKNELESVMRKLKTIEGMLNV 714
>gi|225852173|ref|YP_002732406.1| RelA/SpoT family protein [Brucella melitensis ATCC 23457]
gi|256113192|ref|ZP_05454060.1| RelA/SpoT family protein [Brucella melitensis bv. 3 str. Ether]
gi|256264316|ref|ZP_05466848.1| GTP pyrophosphokinase rsh [Brucella melitensis bv. 2 str. 63/9]
gi|265994600|ref|ZP_06107157.1| GTP pyrophosphokinase [Brucella melitensis bv. 3 str. Ether]
gi|225640538|gb|ACO00452.1| RelA/SpoT family protein [Brucella melitensis ATCC 23457]
gi|262765713|gb|EEZ11502.1| GTP pyrophosphokinase [Brucella melitensis bv. 3 str. Ether]
gi|263094589|gb|EEZ18387.1| GTP pyrophosphokinase rsh [Brucella melitensis bv. 2 str. 63/9]
gi|326408674|gb|ADZ65739.1| RelA/SpoT family protein [Brucella melitensis M28]
gi|326538399|gb|ADZ86614.1| RelA/SpoT family protein [Brucella melitensis M5-90]
Length = 750
Score = 36.9 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + + I NI + + R+ + + + D LN ++
Sbjct: 676 RISVSAINSPGSLAEIAQIAAANDANIHNLSMVRTAP-DFTEMIIDVEVWDLKHLNRIIS 734
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 735 QLKESASVSSAKRVN 749
>gi|148559492|ref|YP_001258636.1| GTP pyrophosphokinase [Brucella ovis ATCC 25840]
gi|254701440|ref|ZP_05163268.1| RelA/SpoT family protein [Brucella suis bv. 5 str. 513]
gi|254707639|ref|ZP_05169467.1| RelA/SpoT family protein [Brucella pinnipedialis M163/99/10]
gi|254709779|ref|ZP_05171590.1| RelA/SpoT family protein [Brucella pinnipedialis B2/94]
gi|254713781|ref|ZP_05175592.1| RelA/SpoT family protein [Brucella ceti M644/93/1]
gi|254717162|ref|ZP_05178973.1| RelA/SpoT family protein [Brucella ceti M13/05/1]
gi|256031269|ref|ZP_05444883.1| RelA/SpoT family protein [Brucella pinnipedialis M292/94/1]
gi|256060780|ref|ZP_05450942.1| RelA/SpoT family protein [Brucella neotomae 5K33]
gi|256159379|ref|ZP_05457161.1| RelA/SpoT family protein [Brucella ceti M490/95/1]
gi|256254677|ref|ZP_05460213.1| RelA/SpoT family protein [Brucella ceti B1/94]
gi|256369090|ref|YP_003106598.1| RelA/SpoT family protein [Brucella microti CCM 4915]
gi|260168405|ref|ZP_05755216.1| RelA/SpoT family protein [Brucella sp. F5/99]
gi|261218978|ref|ZP_05933259.1| GTP pyrophosphokinase [Brucella ceti M13/05/1]
gi|261221854|ref|ZP_05936135.1| GTP pyrophosphokinase [Brucella ceti B1/94]
gi|261315132|ref|ZP_05954329.1| GTP pyrophosphokinase [Brucella pinnipedialis M163/99/10]
gi|261317312|ref|ZP_05956509.1| GTP pyrophosphokinase [Brucella pinnipedialis B2/94]
gi|261321523|ref|ZP_05960720.1| GTP pyrophosphokinase [Brucella ceti M644/93/1]
gi|261324771|ref|ZP_05963968.1| GTP pyrophosphokinase [Brucella neotomae 5K33]
gi|261751980|ref|ZP_05995689.1| GTP pyrophosphokinase [Brucella suis bv. 5 str. 513]
gi|261757867|ref|ZP_06001576.1| GTP pyrophosphokinase rsh [Brucella sp. F5/99]
gi|265988351|ref|ZP_06100908.1| GTP pyrophosphokinase [Brucella pinnipedialis M292/94/1]
gi|265997818|ref|ZP_06110375.1| GTP pyrophosphokinase [Brucella ceti M490/95/1]
gi|205829112|sp|A5VPI9|RSH_BRUO2 RecName: Full=GTP pyrophosphokinase rsh; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase
gi|148370749|gb|ABQ60728.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Brucella ovis ATCC
25840]
gi|255999250|gb|ACU47649.1| RelA/SpoT family protein [Brucella microti CCM 4915]
gi|260920438|gb|EEX87091.1| GTP pyrophosphokinase [Brucella ceti B1/94]
gi|260924067|gb|EEX90635.1| GTP pyrophosphokinase [Brucella ceti M13/05/1]
gi|261294213|gb|EEX97709.1| GTP pyrophosphokinase [Brucella ceti M644/93/1]
gi|261296535|gb|EEY00032.1| GTP pyrophosphokinase [Brucella pinnipedialis B2/94]
gi|261300751|gb|EEY04248.1| GTP pyrophosphokinase [Brucella neotomae 5K33]
gi|261304158|gb|EEY07655.1| GTP pyrophosphokinase [Brucella pinnipedialis M163/99/10]
gi|261737851|gb|EEY25847.1| GTP pyrophosphokinase rsh [Brucella sp. F5/99]
gi|261741733|gb|EEY29659.1| GTP pyrophosphokinase [Brucella suis bv. 5 str. 513]
gi|262552286|gb|EEZ08276.1| GTP pyrophosphokinase [Brucella ceti M490/95/1]
gi|264660548|gb|EEZ30809.1| GTP pyrophosphokinase [Brucella pinnipedialis M292/94/1]
Length = 750
Score = 36.9 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + + I NI + + R+ + + + D LN ++
Sbjct: 676 RISVSAINSPGSLAEIAQIAAANDANIHNLSMVRTAP-DFTEMIIDVEVWDLKHLNRIIS 734
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 735 QLKESASVSSAKRVN 749
>gi|114797934|ref|YP_758905.1| threonine dehydratase [Hyphomonas neptunium ATCC 15444]
gi|114738108|gb|ABI76233.1| threonine dehydratase [Hyphomonas neptunium ATCC 15444]
Length = 408
Score = 36.9 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 10/69 (14%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRS-------QSTEHAISFLCI-DGSIL 76
I IV D G++ V I+G+ G NI + + + D
Sbjct: 334 RIRIVGDDRPGLLALVSKIIGDNGANI--MEVAHNRIALDVPAKGAEFDILMETRDSQHT 391
Query: 77 NSVLEKLSV 85
V++ L+
Sbjct: 392 QEVIDALAQ 400
>gi|317479608|ref|ZP_07938735.1| acetolactate synthase [Bacteroides sp. 4_1_36]
gi|316904270|gb|EFV26097.1| acetolactate synthase [Bacteroides sp. 4_1_36]
Length = 186
Score = 36.9 bits (85), Expect = 0.87, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + + G++ V + INI ++ S + D + V +
Sbjct: 6 YTIIVHSENFAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDTIEKVTK 65
Query: 82 KLSVNVTIRFVKQFE 96
+++ + + F
Sbjct: 66 QITKKIDVLQAHYFT 80
>gi|238762586|ref|ZP_04623556.1| Acetolactate synthase, small subunit [Yersinia kristensenii ATCC
33638]
gi|238699231|gb|EEP91978.1| Acetolactate synthase, small subunit [Yersinia kristensenii ATCC
33638]
Length = 106
Score = 36.9 bits (85), Expect = 0.87, Method: Composition-based stats.
Identities = 8/69 (11%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKL 83
+ + + G++ + + N+ E + +L + D L ++ +L
Sbjct: 17 TLLLTVRNHPGVMSHICGLFARRAFNVDGILCMPLAGGEESRIWLQVLDDQRLQQMISQL 76
Query: 84 SVNVTIRFV 92
+ V
Sbjct: 77 EKLEDVLQV 85
>gi|332178939|gb|AEE14628.1| homoserine dehydrogenase [Thermodesulfobium narugense DSM 14796]
Length = 421
Score = 36.9 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 7/65 (10%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + +L ++ ++I + ++ A + + + + +
Sbjct: 349 KDNPGVLAKIAKVLADHNVSIKSM-VQKTSDKGFAELVFILHQCNEQNFYKSIEDLKLVD 407
Query: 91 FVKQF 95
VK+
Sbjct: 408 SVKEI 412
>gi|326794413|ref|YP_004312233.1| (p)ppGpp synthetase I, SpoT/RelA [Marinomonas mediterranea MMB-1]
gi|326545177|gb|ADZ90397.1| (p)ppGpp synthetase I, SpoT/RelA [Marinomonas mediterranea MMB-1]
Length = 749
Score = 36.9 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
Query: 8 RFIKIQ-EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
R +++ D ++ + I + D G++ + +L +N+ + ++ + A
Sbjct: 656 RIVEVNWGEELD-NLYPVNIQVQAYDRTGLLSDITAMLANERVNLLSMNTLSTKESNTAS 714
Query: 67 SFLCIDGSILN-----SVLEKLSVNVTIRFV 92
I + +L +++ + V
Sbjct: 715 IRFTI--EVGELGTLSKLLHRINQLPNVLNV 743
>gi|218884179|ref|YP_002428561.1| hypothetical protein DKAM_0868 [Desulfurococcus kamchatkensis
1221n]
gi|218765795|gb|ACL11194.1| Conserved archaeal protein, aspartokinase domain protein
[Desulfurococcus kamchatkensis 1221n]
Length = 229
Score = 36.9 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 8/66 (12%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
I N + G + ++ +L GINI S + + ID + L
Sbjct: 164 IENIETPGFISYITTLLARKGINILQIMSAHSD------TIIVIDRKDSVEAFKTLESI- 216
Query: 88 TIRFVK 93
I K
Sbjct: 217 -ILKAK 221
>gi|167855383|ref|ZP_02478150.1| SpoT [Haemophilus parasuis 29755]
gi|167853531|gb|EDS24778.1| SpoT [Haemophilus parasuis 29755]
Length = 703
Score = 36.9 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DG 73
+ + + I + + GI+ + + + + NI H + + + + L D
Sbjct: 623 SVEFEAE---IVVDILNQQGILAGITSAIAKMNSNILDIHSQQREGGVYQVKLLVSVKDK 679
Query: 74 SILNSVLEKLSVNVTIRFV 92
+ L +L KLS V +
Sbjct: 680 THLTEILTKLSHLVGVVKA 698
>gi|138896226|ref|YP_001126679.1| acetolactate synthase 3 regulatory subunit [Geobacillus
thermodenitrificans NG80-2]
gi|196250183|ref|ZP_03148877.1| acetolactate synthase, small subunit [Geobacillus sp. G11MC16]
gi|134267739|gb|ABO67934.1| Acetohydroxy acid synthase small subunit, acetolactate synthase
small subunit [Geobacillus thermodenitrificans NG80-2]
gi|196210367|gb|EDY05132.1| acetolactate synthase, small subunit [Geobacillus sp. G11MC16]
Length = 172
Score = 36.9 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
+I + + G++ + + + NI +G ++ + + D I +++
Sbjct: 4 IITMTVNNRPGVLNRITGLFTKRHYNIESITVGHTEIDGVSRMTFVVNVDDERIAEQIIK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V
Sbjct: 64 QLNKQIDVLKVSDIT 78
>gi|312135689|ref|YP_004003027.1| amino acid-binding ACT domain-containing protein
[Caldicellulosiruptor owensensis OL]
gi|311775740|gb|ADQ05227.1| amino acid-binding ACT domain protein [Caldicellulosiruptor
owensensis OL]
Length = 150
Score = 36.9 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKL 83
+ +V DI GI+ + NI+ E NI + A + I + SV + +
Sbjct: 72 TLALVLKDIPGILSKILNIISETNANILTIN-QNIPLGGIATVSISIRTSGMTKSVKDLI 130
Query: 84 SVNVTIRFVKQFEF 97
+ VK+ E
Sbjct: 131 LEIEKVDGVKKIEI 144
>gi|297798344|ref|XP_002867056.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297312892|gb|EFH43315.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 570
Score = 36.9 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG-------SIL 76
I D ++ + ++LGE G+NI H S + ++ +DG +
Sbjct: 179 HEITFSTIDRPKLLSQLTSMLGELGLNIQEAHAF-STADGFSLDVFVVDGWSQEETEGLK 237
Query: 77 NSVLEKLSVNVT 88
+++ +++
Sbjct: 238 DALTKEIRKLKD 249
>gi|154150824|ref|YP_001404442.1| hypothetical protein Mboo_1281 [Candidatus Methanoregula boonei
6A8]
gi|153999376|gb|ABS55799.1| conserved hypothetical protein [Methanoregula boonei 6A8]
Length = 166
Score = 36.9 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 24/61 (39%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
+ GIV +L + + I + Q +E + I+ + + V ++ +R
Sbjct: 104 NERGIVSAALRVLSNHSLAIRQIFVTDPQLSEDPKLVIIIENPLPDGVANEIRALPQVRQ 163
Query: 92 V 92
V
Sbjct: 164 V 164
>gi|222479305|ref|YP_002565542.1| acetolactate synthase, small subunit [Halorubrum lacusprofundi ATCC
49239]
gi|222452207|gb|ACM56472.1| acetolactate synthase, small subunit [Halorubrum lacusprofundi ATCC
49239]
Length = 239
Score = 36.9 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 33/87 (37%), Gaps = 5/87 (5%)
Query: 10 IKIQEINFDVDIGRLMICIVN--ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
I+I + + + I D G++ V ++ NI +G + H+
Sbjct: 52 IRIDPV-VEAEHESRRAVISALVEDEPGVLARVSGLVSRRQFNIESLTVGPTTVEGHSRI 110
Query: 68 FLCIDGSIL--NSVLEKLSVNVTIRFV 92
+ ++ + + + ++++ + V
Sbjct: 111 TMVVEETDPGIDQIEKQMAKLKPVISV 137
>gi|219871225|ref|YP_002475600.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Haemophilus parasuis SH0165]
gi|219691429|gb|ACL32652.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Haemophilus parasuis SH0165]
Length = 652
Score = 36.9 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DG 73
+ + + I + + GI+ + + + + NI H + + + + L D
Sbjct: 572 SVEFEAE---IVVDILNQQGILAGITSAIAKMNSNILDIHSQQREGGVYQVKLLVSVKDK 628
Query: 74 SILNSVLEKLSVNVTIRFV 92
+ L +L KLS V +
Sbjct: 629 THLTEILTKLSHLVGVVKA 647
>gi|331090529|ref|ZP_08339382.1| hypothetical protein HMPREF9477_00025 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405872|gb|EGG85400.1| hypothetical protein HMPREF9477_00025 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 145
Score = 36.9 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFH----LGRSQSTEHAISFLCIDGSILNSVL 80
+ I D+ G++ + + +Y NI H L R + ++ L G+I + ++
Sbjct: 69 TLAIQMDDMPGLLAEILQEIAKYKANILTIHQSIPLNRVATLTISVEILSTTGNISD-MV 127
Query: 81 EKLSVNVTIRFVKQF 95
++ N + ++K
Sbjct: 128 NEIENNEGVHYLKIV 142
>gi|307717909|ref|YP_003873441.1| homoserine dehydrogenase [Spirochaeta thermophila DSM 6192]
gi|306531634|gb|ADN01168.1| homoserine dehydrogenase [Spirochaeta thermophila DSM 6192]
Length = 440
Score = 36.9 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 31/90 (34%), Gaps = 7/90 (7%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE------HAISFL 69
+ I R + I+ D G++ + ILGE+ I+I+ I
Sbjct: 343 PLEATISRFYLRIMVEDRPGVLARITGILGEHDISISSVLQKEVPEGRSTNHVPIVIITH 402
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ + + +++ T+ + +
Sbjct: 403 TVGEARVQEAADRIGNLPTVHE-RPVIIPI 431
>gi|218290120|ref|ZP_03494282.1| amino acid-binding ACT domain protein [Alicyclobacillus
acidocaldarius LAA1]
gi|218239829|gb|EED07018.1| amino acid-binding ACT domain protein [Alicyclobacillus
acidocaldarius LAA1]
Length = 256
Score = 36.9 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 3/75 (4%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ D G++ + ++LG G+NI L + +D + VL
Sbjct: 3 EYYFQYHIRRDRPGLLGDIASLLGMLGVNIV--QLSGVSEYGRGF-LIDVDRPDILDVLR 59
Query: 82 KLSVNVTIRFVKQFE 96
+ ++ V
Sbjct: 60 TMLESMEDIEVTALR 74
>gi|110834424|ref|YP_693283.1| formyltetrahydrofolate deformylase [Alcanivorax borkumensis SK2]
gi|110647535|emb|CAL17011.1| formyltetrahydrofolate deformylase [Alcanivorax borkumensis SK2]
Length = 290
Score = 36.9 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 18/62 (29%), Gaps = 1/62 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D GI+ V L +G NI F L L+ E L
Sbjct: 10 RLLVTCPDKPGIISAVSTFLYNHGANITDFDQHSSDAHGGTFFLRLEFQTPELDCSREAL 69
Query: 84 SV 85
Sbjct: 70 RN 71
>gi|297599573|ref|NP_001047389.2| Os02g0608600 [Oryza sativa Japonica Group]
gi|255671076|dbj|BAF09303.2| Os02g0608600 [Oryza sativa Japonica Group]
Length = 340
Score = 36.9 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL---CIDGSILNSVL 80
+ I+ D G++ V + G NI +G ++ + + D SI ++
Sbjct: 171 HTLSILVNDCPGVLNIVTGVFARRGYNIQSLAVGPAEKSGLSRITTVAPGTDESI-EKLV 229
Query: 81 EKLSVNVTIRFVKQFE 96
++L+ V + V+
Sbjct: 230 QQLNKLVDVHEVQDIT 245
>gi|251771314|gb|EES51895.1| Homoserine dehydrogenase [Leptospirillum ferrodiazotrophum]
Length = 450
Score = 36.9 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 25/71 (35%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL 76
D + + D G + ++ +LGE GI+I Q + +
Sbjct: 356 LDSISSEYYLRFMAHDQPGTLSYLSGVLGERGISIESVIQKGRQKGGSVPVVVTTHRATE 415
Query: 77 NSVLEKLSVNV 87
+ V E LS+
Sbjct: 416 SRVREALSIID 426
>gi|260774739|ref|ZP_05883642.1| GTP pyrophosphokinase (p)ppGpp synthetase
II/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609301|gb|EEX35453.1| GTP pyrophosphokinase (p)ppGpp synthetase
II/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 707
Score = 36.9 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 6/67 (8%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI----DGSILNSVLEKLSVN 86
+ G + + N++ + G NI L + + + D L ++ K+
Sbjct: 639 QNRQGALAELTNVISQTGSNIHG--LSTEEKDGRLYTVTVLLTTKDRVHLAGIMRKIKAM 696
Query: 87 VTIRFVK 93
V+
Sbjct: 697 PHTLKVR 703
>gi|227824231|ref|ZP_03989063.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226904730|gb|EEH90648.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 221
Score = 36.9 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 17 FDVDIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCIDG 73
D G + I D + + +++G+YG N+ + L H+++F L I G
Sbjct: 128 IDTTPGGWRVKIRLTRPDEPNAMSSILSMVGDYGFNMQYMELMSFNEGTHSVTFDLTILG 187
Query: 74 SILNSVLEKL 83
+ ++ ++KL
Sbjct: 188 DLSDTAMQKL 197
>gi|220912303|ref|YP_002487612.1| prephenate dehydrogenase [Arthrobacter chlorophenolicus A6]
gi|219859181|gb|ACL39523.1| Prephenate dehydrogenase [Arthrobacter chlorophenolicus A6]
Length = 369
Score = 36.9 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 26/60 (43%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ ++ D G + + +GE G+N+ L S + + + + + ++E L+
Sbjct: 303 LTVLVDDRPGQIAQLLTEIGEIGVNLEDLRLDHSSGQNVGMVEISVLPNKHDHLIEALND 362
>gi|222529936|ref|YP_002573818.1| hypothetical protein Athe_1958 [Caldicellulosiruptor bescii DSM
6725]
gi|312127048|ref|YP_003991922.1| amino acid-binding ACT domain-containing protein
[Caldicellulosiruptor hydrothermalis 108]
gi|312621831|ref|YP_004023444.1| amino acid-binding ACT domain-containing protein
[Caldicellulosiruptor kronotskyensis 2002]
gi|312792960|ref|YP_004025883.1| amino acid-binding ACT domain-containing protein
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312876426|ref|ZP_07736410.1| amino acid-binding ACT domain protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|222456783|gb|ACM61045.1| amino acid-binding ACT domain protein [Caldicellulosiruptor bescii
DSM 6725]
gi|311777067|gb|ADQ06553.1| amino acid-binding ACT domain protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311796784|gb|EFR13129.1| amino acid-binding ACT domain protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|312180100|gb|ADQ40270.1| amino acid-binding ACT domain protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312202298|gb|ADQ45625.1| amino acid-binding ACT domain protein [Caldicellulosiruptor
kronotskyensis 2002]
Length = 150
Score = 36.9 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKL 83
+ +V DI GI+ + NI+ E NI + A + I + SV + +
Sbjct: 72 TLALVLKDIPGILSKILNIISETNANILTIN-QNIPLGGIATVSISIRTSGMTKSVKDLI 130
Query: 84 SVNVTIRFVKQFEF 97
+ VK+ E
Sbjct: 131 LEIEKVDGVKKIEI 144
>gi|163749744|ref|ZP_02156990.1| transcriptional regulatory protein TyrR [Shewanella benthica
KT99]
gi|161330557|gb|EDQ01515.1| transcriptional regulatory protein TyrR [Shewanella benthica
KT99]
Length = 512
Score = 36.9 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D +G+ + IL YGIN+ + F ++ +L+ +L + +
Sbjct: 9 DRVGLAKDILMILEGYGINLIAIDASNQ--GFLYLQFAEVNFDVLSELLPLIRKVAGVHD 66
Query: 92 VKQFEF 97
V+ F
Sbjct: 67 VRTVSF 72
>gi|222478727|ref|YP_002564964.1| threonine dehydratase [Halorubrum lacusprofundi ATCC 49239]
gi|222451629|gb|ACM55894.1| threonine dehydratase [Halorubrum lacusprofundi ATCC 49239]
Length = 442
Score = 36.9 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 9/91 (9%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMIC---IVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
G ++E+ + R + + D G + + ++G NI RS+
Sbjct: 340 GGNIDVTTLKEVVTHALVERDQLIELAVRIDDTPGTMGEISTLIGAERANIRTVRHERSR 399
Query: 61 ST---EHAISFLCIDGSIL---NSVLEKLSV 85
A ++ + + VL+ +
Sbjct: 400 PDLPVGDADLVFEVETNGPAHVDRVLKAVRE 430
>gi|150864337|ref|XP_001383109.2| 3-phosphoglycerate dehydrogenase, serine biosynthesis
[Scheffersomyces stipitis CBS 6054]
gi|149385593|gb|ABN65080.2| 3-phosphoglycerate dehydrogenase, serine biosynthesis
[Scheffersomyces stipitis CBS 6054]
Length = 468
Score = 36.9 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILN--SVLE 81
+ ++ ++ G++ V NIL + NI E A I D I + S+ E
Sbjct: 398 RVLYIHQNVPGVLKTVNNILSNH--NIEKQ--FTDSQGEIAYLMADISDVDITDIKSLYE 453
Query: 82 KLSVNVTIRFVKQF 95
+L +
Sbjct: 454 QLEQTPYKIATRLL 467
>gi|16081963|ref|NP_394373.1| chorismate mutase/prephenate dehydratase related protein
[Thermoplasma acidophilum DSM 1728]
gi|10640192|emb|CAC12044.1| chorismate mutase/prephenate dehydratase related protein
[Thermoplasma acidophilum]
Length = 277
Score = 36.9 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH--A 65
RFI I +V+ R +I V D G + + +L GIN+ + R
Sbjct: 185 RFILI-GRERNVEGSRHIILCVIPDRPGSLHSLIGVLASRGINM-NMIYSRPLRDTIWKY 242
Query: 66 ISFLCIDGSILNSVL 80
++ G + +L
Sbjct: 243 YFYIEFSGKLDEDLL 257
>gi|315187511|gb|EFU21267.1| homoserine dehydrogenase [Spirochaeta thermophila DSM 6578]
Length = 440
Score = 36.9 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 31/90 (34%), Gaps = 7/90 (7%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE------HAISFL 69
+ I R + I+ D G++ + ILGE+ I+I+ I
Sbjct: 343 PLEATISRFYLRIMVEDRPGVLARITGILGEHDISISSVLQKEVPEGRGTNHVPIVIITH 402
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
+ + + +++ T+ + +
Sbjct: 403 TVGEARVQEAADRIGNLPTVHE-RPVIIPI 431
>gi|238923130|ref|YP_002936643.1| hypothetical protein EUBREC_0723 [Eubacterium rectale ATCC 33656]
gi|238874802|gb|ACR74509.1| hypothetical protein EUBREC_0723 [Eubacterium rectale ATCC 33656]
gi|291523977|emb|CBK89564.1| ACT domain-containing protein [Eubacterium rectale DSM 17629]
gi|291528561|emb|CBK94147.1| ACT domain-containing protein [Eubacterium rectale M104/1]
Length = 147
Score = 36.9 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 5/74 (6%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID----GSILNSVLE 81
+ I D GI+ V + + NI H A L +D ++ + +
Sbjct: 72 LVIQMDDEQGILSVVLKSVADAKANILTIHQS-VPVNGIASLTLSVDVFPESDDVDDMAK 130
Query: 82 KLSVNVTIRFVKQF 95
++ I +VK
Sbjct: 131 QIESLKGIHYVKIL 144
>gi|168005319|ref|XP_001755358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693486|gb|EDQ79838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 582
Score = 36.9 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D ++ + +L + G+NI H+ S + ++++ +DG + E
Sbjct: 185 IDKPKLLSQMSALLADVGLNILEAHVF-STTDGYSLAVFVVDGWQSEEIQELTRALSRAL 243
Query: 91 FV 92
Sbjct: 244 SA 245
>gi|227510065|ref|ZP_03940114.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190444|gb|EEI70511.1| D-3-phosphoglycerate dehydrogenase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 395
Score = 36.9 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 4/91 (4%), Positives = 28/91 (30%), Gaps = 8/91 (8%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ I + ++ + ++L + + + + + + +
Sbjct: 297 VNFPRVDLPF-ISPHRLTFFFKTQENVMAKISSLLNKRALPV--MEMMNNNQNGFGYTIV 353
Query: 70 CID-GSILNS----VLEKLSVNVTIRFVKQF 95
D + ++ + + + V++
Sbjct: 354 NTDFSDFSDEQVTNLVAEFASMKGMLRVRKL 384
>gi|219852711|ref|YP_002467143.1| amino acid-binding ACT domain protein [Methanosphaerula palustris
E1-9c]
gi|219546970|gb|ACL17420.1| amino acid-binding ACT domain protein [Methanosphaerula palustris
E1-9c]
Length = 144
Score = 36.9 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 6/83 (7%)
Query: 14 EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG 73
N +I + D G + + +LG+ GINI + + + A+ L +D
Sbjct: 68 GFNVAFT---EVIAVAMRDEPGGLFDIATLLGDAGINIEYSYAYSGKDG--AVLILRVDQ 122
Query: 74 SILNSVLEKLSVNVTIRFVKQFE 96
+ ++ L+ + K F
Sbjct: 123 -VEQAIEAVLAGKKELLQAKAFS 144
>gi|110679774|ref|YP_682781.1| homoserine dehydrogenase [Roseobacter denitrificans OCh 114]
gi|109455890|gb|ABG32095.1| homoserine dehydrogenase [Roseobacter denitrificans OCh 114]
Length = 428
Score = 36.9 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ + D G + + +LGE G++I + + A L + +
Sbjct: 344 ALPASYYLRMSLHDKPGALAKIATVLGEAGVSIDRMR--QYGHADTAAPVLIVTHKTTPA 401
Query: 79 VL-EKLSVN 86
+ + L+
Sbjct: 402 AISDALAAM 410
>gi|330897096|gb|EGH28574.1| GTP pyrophosphokinase [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 135
Score = 36.9 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 36 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 95
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 96 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 130
>gi|326332901|ref|ZP_08199158.1| homoserine dehydrogenase [Nocardioidaceae bacterium Broad-1]
gi|325949259|gb|EGD41342.1| homoserine dehydrogenase [Nocardioidaceae bacterium Broad-1]
Length = 437
Score = 36.9 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 7/65 (10%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK----LSVNV 87
D G++ V E+G++I R + + + ++ L L
Sbjct: 366 DKAGVLAAVATAFSEHGVSIKAV---RQEGRGEDAQLVVVSHEAPDAALAATVQHLREME 422
Query: 88 TIRFV 92
+R V
Sbjct: 423 YVRDV 427
>gi|288561367|ref|YP_003424853.1| acetolactate synthase small subunit IlvN [Methanobrevibacter
ruminantium M1]
gi|288544077|gb|ADC47961.1| acetolactate synthase small subunit IlvN [Methanobrevibacter
ruminantium M1]
Length = 163
Score = 36.9 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 33 ILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTIR 90
G++ V +L G NI +G S+ A + D +L V+++L V +
Sbjct: 15 KPGVLQKVAGLLNRRGFNIDSITVGASEVEGLARMVFVVKGDEKVLEQVIKQLHKLVEVV 74
Query: 91 FVKQF 95
+K
Sbjct: 75 KIKDL 79
>gi|255326257|ref|ZP_05367343.1| homoserine dehydrogenase [Rothia mucilaginosa ATCC 25296]
gi|255296711|gb|EET76042.1| homoserine dehydrogenase [Rothia mucilaginosa ATCC 25296]
Length = 429
Score = 36.9 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG++ + IL E+GI++ A + + + + ++V +
Sbjct: 355 EDRLGVLANITRILAEHGISVDSLRQST-PKEGAAQIRMVTHSAKDSDLRRAIAVIDALD 413
Query: 91 FVKQFE 96
V++
Sbjct: 414 TVREVN 419
>gi|240143315|ref|ZP_04741916.1| ACT domain-containing protein PheB [Roseburia intestinalis L1-82]
gi|257204686|gb|EEV02971.1| ACT domain-containing protein PheB [Roseburia intestinalis L1-82]
gi|291536824|emb|CBL09936.1| ACT domain-containing protein [Roseburia intestinalis M50/1]
gi|291539127|emb|CBL12238.1| ACT domain-containing protein [Roseburia intestinalis XB6B4]
Length = 147
Score = 36.9 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 5/75 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL----NSVL 80
+ I D G++ V + E+ NI H A L +D +L
Sbjct: 71 TLVIQLDDEPGLLSVVLKTVAEFHANILTIHQSI-PINGIASLTLSVDVLPQTGDVAEML 129
Query: 81 EKLSVNVTIRFVKQF 95
E + I +VK
Sbjct: 130 EHIEEQEGIHYVKIL 144
>gi|222642019|gb|EEE70151.1| hypothetical protein OsJ_30202 [Oryza sativa Japonica Group]
Length = 572
Score = 36.9 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
N + I D ++ + ++LGE G+NI H S + +++ + G
Sbjct: 169 NVNYRP-MHEITFSTIDKPKLLSELTSLLGELGLNIQEAHAF-STNDGYSLDVFVVVGWH 226
Query: 76 LNSVLEKLSVN 86
+ +
Sbjct: 227 DEETEDLIESV 237
>gi|194289910|ref|YP_002005817.1| homoserine dehydrogenase [Cupriavidus taiwanensis LMG 19424]
gi|193223745|emb|CAQ69752.1| HOMOSERINE DEHYDROGENASE [Cupriavidus taiwanensis LMG 19424]
Length = 436
Score = 36.9 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS-----VLEKLSVN 86
D G++ + IL E GI+I L + + + I I + K+
Sbjct: 362 DETGVLAEITRILAEGGISIDAM-LQKESREGEPQTDIIILTHITREKHVNAAIAKIEAL 420
Query: 87 VTIRFV 92
T+
Sbjct: 421 PTVLSA 426
>gi|197119390|ref|YP_002139817.1| homoserine dehydrogenase [Geobacter bemidjiensis Bem]
gi|197088750|gb|ACH40021.1| homoserine dehydrogenase [Geobacter bemidjiensis Bem]
Length = 436
Score = 36.9 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 21/56 (37%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
D G++ + LG GI+IA ++E + + + + L+
Sbjct: 362 DRPGVLARIAGALGASGISIASMLQSARSASEVVPIVIMTHEARESDMRRALAEID 417
>gi|115480473|ref|NP_001063830.1| Os09g0544300 [Oryza sativa Japonica Group]
gi|32490474|dbj|BAC79157.1| putative serine/threonine-protein kinase ctr1 [Oryza sativa
Japonica Group]
gi|113632063|dbj|BAF25744.1| Os09g0544300 [Oryza sativa Japonica Group]
gi|125564565|gb|EAZ09945.1| hypothetical protein OsI_32244 [Oryza sativa Indica Group]
gi|215704260|dbj|BAG93100.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 603
Score = 36.9 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
N + I D ++ + ++LGE G+NI H S + +++ + G
Sbjct: 200 NVNYRP-MHEITFSTIDKPKLLSELTSLLGELGLNIQEAHAF-STNDGYSLDVFVVVGWH 257
Query: 76 LNSVLEKLSVN 86
+ +
Sbjct: 258 DEETEDLIESV 268
>gi|241950089|ref|XP_002417767.1| 3-PGDH, putative; D-3-phosphoglycerate dehydrogenase 1, putative
[Candida dubliniensis CD36]
gi|223641105|emb|CAX45481.1| 3-PGDH, putative [Candida dubliniensis CD36]
Length = 463
Score = 36.9 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILN--SVLE 81
+ ++ ++ G++ V NIL + NI E A I D I + S+ E
Sbjct: 393 RVLYIHQNVPGVLKTVNNILSNH--NIEKQFS--DSQGEIAYLMADISDVDISDIQSLYE 448
Query: 82 KLSVNVTIRFVKQF 95
+L +
Sbjct: 449 QLEQTPYKIATRLL 462
>gi|138895289|ref|YP_001125742.1| formyltetrahydrofolate deformylase [Geobacillus
thermodenitrificans NG80-2]
gi|134266802|gb|ABO66997.1| Formyltetrahydrofolate deformylase [Geobacillus
thermodenitrificans NG80-2]
Length = 300
Score = 36.9 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I D GIV V + L E G NI L D + E++
Sbjct: 21 RLLISCPDRPGIVAAVTSFLYEQGANIVESSQYSTDPEGGTFFLRLEFDCPNIAGRKEEI 80
Query: 84 S 84
Sbjct: 81 E 81
>gi|110680020|ref|YP_683027.1| acetolactate synthase 3 regulatory subunit [Roseobacter
denitrificans OCh 114]
gi|109456136|gb|ABG32341.1| acetolactate synthase, small subunit [Roseobacter denitrificans OCh
114]
Length = 186
Score = 36.9 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + ++ + G++ V + G NI + T H +S + I S V+E
Sbjct: 27 ERHTLAVLVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGH-LSRITIVTSGTPQVIE 85
Query: 82 KLSV-NVTIRFVKQFE 96
++ I V
Sbjct: 86 QIKAQLGRIVSVHDVH 101
>gi|56419826|ref|YP_147144.1| hypothetical protein GK1291 [Geobacillus kaustophilus HTA426]
gi|261419493|ref|YP_003253175.1| amino acid-binding ACT domain protein [Geobacillus sp. Y412MC61]
gi|297530534|ref|YP_003671809.1| amino acid-binding ACT domain protein [Geobacillus sp. C56-T3]
gi|319766310|ref|YP_004131811.1| amino acid-binding ACT domain protein [Geobacillus sp. Y412MC52]
gi|56379668|dbj|BAD75576.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
gi|261375950|gb|ACX78693.1| amino acid-binding ACT domain protein [Geobacillus sp. Y412MC61]
gi|297253786|gb|ADI27232.1| amino acid-binding ACT domain protein [Geobacillus sp. C56-T3]
gi|317111176|gb|ADU93668.1| amino acid-binding ACT domain protein [Geobacillus sp. Y412MC52]
Length = 263
Score = 36.9 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 29 VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
++ + G++ V ++LG INI + R + LC + + + L
Sbjct: 12 IHVNRPGLLGDVASLLGMLSINIVTINGVRDSRRG--MLLLCDNNEQIERLATILRTMDN 69
Query: 89 IRFVKQ 94
I K
Sbjct: 70 ITVTKL 75
>gi|154245436|ref|YP_001416394.1| acetolactate synthase, small subunit [Xanthobacter autotrophicus
Py2]
gi|154159521|gb|ABS66737.1| acetolactate synthase, small subunit [Xanthobacter autotrophicus
Py2]
Length = 171
Score = 36.9 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 5/83 (6%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
I R + ++ + G++ V + G NI + +S + + + V
Sbjct: 7 PIERHTLSVLVDNEPGVLARVIGLFSGRGYNIDSLTVSEVSHEGR-LSRITLVTTGTPMV 65
Query: 80 LEKLSV----NVTIRFVKQFEFN 98
+E++ V + V+
Sbjct: 66 IEQIKNQLDRLVPVHRVRDLTVE 88
>gi|183219491|ref|YP_001837487.1| homoserine dehydrogenase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189909634|ref|YP_001961189.1| homoserine dehydrogenase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167774310|gb|ABZ92611.1| Homoserine dehydrogenase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167777913|gb|ABZ96211.1| Homoserine dehydrogenase (HDH) [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 427
Score = 36.9 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVNV 87
D G++ + +LG + I+IA + + +ST +S + + + L ++
Sbjct: 354 DKPGVLAEISQVLGRHNISIAS--VQQKESTSEPVSVIVVTHAATEGEFQKSLMEIDTMT 411
Query: 88 TIRFVKQFEF 97
I K
Sbjct: 412 NIIKQKTVAI 421
>gi|325971923|ref|YP_004248114.1| hypothetical protein SpiBuddy_2099 [Spirochaeta sp. Buddy]
gi|324027161|gb|ADY13920.1| CBS domain containing membrane protein [Spirochaeta sp. Buddy]
Length = 214
Score = 36.9 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
D G + + L E GI+I F +AI + + G+ ++ V+E +
Sbjct: 149 EDKPGTIAKISQALSEQGIDIITFGTFMGTDPTNAICTIKVQGAPISKVVEIIK 202
>gi|258511447|ref|YP_003184881.1| amino acid-binding ACT domain-containing protein
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257478173|gb|ACV58492.1| amino acid-binding ACT domain protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 256
Score = 36.9 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 3/75 (4%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ D G++ + ++LG G+NI L + +D + VL
Sbjct: 3 EYYFQYHIRRDRPGLLGDIASLLGMLGVNIV--QLSGVSEYGRGF-LIDVDRPDILDVLR 59
Query: 82 KLSVNVTIRFVKQFE 96
+ ++ V
Sbjct: 60 TMLESMEDIEVTALR 74
>gi|119872528|ref|YP_930535.1| amino acid-binding ACT domain-containing protein [Pyrobaculum
islandicum DSM 4184]
gi|119673936|gb|ABL88192.1| amino acid-binding ACT domain protein [Pyrobaculum islandicum DSM
4184]
Length = 197
Score = 36.9 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 30 NADILGIVVFVGNILGEYGINIAHFHL-GRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
N D GI+ + NI E+ +NI + + G Q I L +L++L +
Sbjct: 4 NFDQPGILATLSNIFAEHDVNIINIAIDGLRQHLHFITDLTMISEDQLQEILKQLQMFAF 63
Query: 89 IRFVK 93
++ VK
Sbjct: 64 VKRVK 68
>gi|19112699|ref|NP_595907.1| acetolactate synthase regulatory unit [Schizosaccharomyces pombe
972h-]
gi|74626793|sp|O60086|ILV6_SCHPO RecName: Full=Probable acetolactate synthase small subunit;
AltName: Full=Acetohydroxy-acid synthase small subunit;
Short=AHAS; Short=ALS
gi|6580693|emb|CAA18422.2| acetolactate synthase regulatory unit [Schizosaccharomyces pombe]
Length = 289
Score = 36.9 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R + + + G++ + IL G NI + ++ + + + V
Sbjct: 67 RPKRHVFNCLVQNEPGVLSRLSGILAARGFNIDSLVVCATEVENLSRMTIVL-RGADEVV 125
Query: 80 LEKLSVNVTIRFV 92
+ I V
Sbjct: 126 EQAKRQIEDIVSV 138
>gi|54302946|ref|YP_132939.1| hypothetical protein PBPRB1268 [Photobacterium profundum SS9]
gi|46916374|emb|CAG23139.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 168
Score = 36.9 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGR--SQSTEHAI 66
+K + V + + + ++D GIV + NIL + GINI R +
Sbjct: 74 VVKSDQPQVFVKTEHITLKVESSDRPGIVNDITNILQDIGINIDRIENHRIGVPDLGKTL 133
Query: 67 SFLCIDGSIL-----NSVLEKLSVNVTIRFVKQF 95
F + + ++E + V+
Sbjct: 134 FFAELSIDVPSQTNLEQLIESVQQVEGDMRVEVV 167
>gi|320159737|ref|YP_004172961.1| acetolactate synthase, small subunit [Anaerolinea thermophila
UNI-1]
gi|319993590|dbj|BAJ62361.1| acetolactate synthase, small subunit [Anaerolinea thermophila
UNI-1]
Length = 179
Score = 36.9 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLE 81
+ + D G++ V ++ NI +G ++ + + +DG + ++
Sbjct: 3 HTLVALVEDKPGVLNRVASLFRRRAFNIESLTVGHTEQPGLSRMTIVVDGDDIAIERLIA 62
Query: 82 KLSVNVTIRFV 92
L V + V
Sbjct: 63 YLYKLVNVVHV 73
>gi|239827062|ref|YP_002949686.1| formyltetrahydrofolate deformylase [Geobacillus sp. WCH70]
gi|239807355|gb|ACS24420.1| formyltetrahydrofolate deformylase [Geobacillus sp. WCH70]
Length = 300
Score = 36.9 bits (85), Expect = 0.98, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 15/51 (29%), Gaps = 1/51 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFLCIDGS 74
+ I D GIV V + L E G NI + D
Sbjct: 21 RLLISCPDKPGIVASVTSFLYEQGANIVESSQYSTDPEGGTFFLRIEFDCP 71
>gi|154312124|ref|XP_001555390.1| hypothetical protein BC1G_06095 [Botryotinia fuckeliana B05.10]
gi|150850058|gb|EDN25251.1| hypothetical protein BC1G_06095 [Botryotinia fuckeliana B05.10]
Length = 471
Score = 36.9 bits (85), Expect = 0.98, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 25/74 (33%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NSVLE 81
+ ++ +I G++ V ILG++ ++ + A I ++E
Sbjct: 401 RVIYIHHNIPGVLRKVNEILGDHNVD----KQITDNKGDVAYLMADISNVQTSDLKDIVE 456
Query: 82 KLSVNVTIRFVKQF 95
L + +
Sbjct: 457 SLEALSSRILTRVL 470
>gi|149926837|ref|ZP_01915096.1| homoserine dehydrogenase [Limnobacter sp. MED105]
gi|149824389|gb|EDM83607.1| homoserine dehydrogenase [Limnobacter sp. MED105]
Length = 454
Score = 36.9 bits (85), Expect = 0.98, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D G++ V +L + I+I + E A L + V + ++ +
Sbjct: 379 DDKPGVLAEVTRLLADNQISIEAMIQRQATSEKETAEIVLLTHRCVEGDVNKAIAKIEAL 438
Query: 90 RFV 92
V
Sbjct: 439 DSV 441
>gi|124485423|ref|YP_001030039.1| prephenate dehydratase [Methanocorpusculum labreanum Z]
gi|124362964|gb|ABN06772.1| prephenate dehydratase [Methanocorpusculum labreanum Z]
Length = 265
Score = 36.9 bits (85), Expect = 0.98, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 21/69 (30%), Gaps = 4/69 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NSVLEK 82
+ I + G++ + I + GIN+ R ID + +
Sbjct: 188 VIIPRENRPGLLYGILGIFAQRGINLTRIE-SRPSKEGIGRYVFFIDFETDPGWQETITE 246
Query: 83 LSVNVTIRF 91
L ++
Sbjct: 247 LKKITGVKE 255
>gi|156064373|ref|XP_001598108.1| hypothetical protein SS1G_00194 [Sclerotinia sclerotiorum 1980]
gi|154691056|gb|EDN90794.1| hypothetical protein SS1G_00194 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 470
Score = 36.9 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + D + + ++ +I G++ V ILG++ ++ + A
Sbjct: 386 VNLRSLTLD-ESNHARVIYIHHNIPGVLRKVNEILGDHNVD----KQITDNKGDVAYLMA 440
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQFE 96
I + L++++ ++ +
Sbjct: 441 DISNVQTSD-LKEIADSLEALSSRILT 466
>gi|317153777|ref|YP_004121825.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944028|gb|ADU63079.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
Length = 726
Score = 36.9 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 28/91 (30%), Gaps = 6/91 (6%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST--- 62
+ R + + + I I + G++ + ++L E +NI
Sbjct: 634 EERLVGVNWEGVEEKPYPAKIKIKCLNKTGMLGKICSMLAEQNVNIDSGSFESKVDGTSV 693
Query: 63 -EHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
E + +D L K+ ++
Sbjct: 694 LEFTVEVKDLDQLYS--ALSKVKALKAVQEA 722
>gi|47496834|dbj|BAD19594.1| putative acetolactate synthase small subunit [Oryza sativa Japonica
Group]
gi|47497949|dbj|BAD20154.1| putative acetolactate synthase small subunit [Oryza sativa Japonica
Group]
Length = 323
Score = 36.9 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL---CIDGSILNSVL 80
+ I+ D G++ V + G NI +G ++ + + D SI ++
Sbjct: 154 HTLSILVNDCPGVLNIVTGVFARRGYNIQSLAVGPAEKSGLSRITTVAPGTDESI-EKLV 212
Query: 81 EKLSVNVTIRFVKQFE 96
++L+ V + V+
Sbjct: 213 QQLNKLVDVHEVQDIT 228
>gi|319782939|ref|YP_004142415.1| acetolactate synthase, small subunit [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168827|gb|ADV12365.1| acetolactate synthase, small subunit [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 190
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ ++ + G++ V + G NI + ++ +H +S + I V
Sbjct: 20 KPENHTLSVLVDNEPGVLARVIGLFSGRGYNIESLTVSETEHEKH-LSRITIVTRGTPHV 78
Query: 80 LEKLS-VNVTIRFV-KQFEFNV 99
LE++ I V + + V
Sbjct: 79 LEQIKHQLERIVPVHRVVDLTV 100
>gi|149246996|ref|XP_001527923.1| D-3-phosphoglycerate dehydrogenase 1 [Lodderomyces elongisporus
NRRL YB-4239]
gi|146447877|gb|EDK42265.1| D-3-phosphoglycerate dehydrogenase 1 [Lodderomyces elongisporus
NRRL YB-4239]
Length = 463
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILN--SVLE 81
+ ++ ++ G++ V NIL + NI + A I D I + S+ E
Sbjct: 393 RVLYIHHNVPGVLKTVNNILSNH--NIEKQFS--DSQGDIAYLMADISDVDISDIKSLYE 448
Query: 82 KLSVNVTIRFVKQF 95
+L +
Sbjct: 449 QLEQTPYKIATRLL 462
>gi|138894811|ref|YP_001125264.1| ACT domain-containing protein [Geobacillus thermodenitrificans
NG80-2]
gi|196247562|ref|ZP_03146264.1| amino acid-binding ACT domain protein [Geobacillus sp. G11MC16]
gi|134266324|gb|ABO66519.1| ACT domain protein [Geobacillus thermodenitrificans NG80-2]
gi|196212346|gb|EDY07103.1| amino acid-binding ACT domain protein [Geobacillus sp. G11MC16]
Length = 263
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 29 VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
++ + G++ V ++LG INI + R + LC + + + L
Sbjct: 12 IHVNRPGLLGDVASLLGMLSINIVTINGVRDSRRG--MLLLCDNNEQIERLATILRTMDN 69
Query: 89 IRFVKQ 94
I K
Sbjct: 70 ITVTKL 75
>gi|33865245|ref|NP_896804.1| homoserine dehydrogenase [Synechococcus sp. WH 8102]
gi|33638929|emb|CAE07226.1| homoserine dehydrogenase [Synechococcus sp. WH 8102]
Length = 435
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVNVT 88
D G++ VG G+ G++I + I + + + + L+ ++
Sbjct: 365 EDAPGVIGKVGGRFGDAGVSIQSIVQFNASEAGAEIVVITHEVSQRKVIAALDAITSLDE 424
Query: 89 I 89
+
Sbjct: 425 V 425
>gi|114567653|ref|YP_754807.1| acetolactate synthase small subunit [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114338588|gb|ABI69436.1| acetolactate synthase, small subunit [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 160
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ + + G++ V + G NI +G +++ + + + D I+ V +
Sbjct: 4 HTLAVTVENRPGVLTRVTTMFRRRGYNIESLAVGATENPAISRITIEVTGDDRIIEQVTK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L + + +
Sbjct: 64 QLYKLIEVIKINDLT 78
>gi|311105096|ref|YP_003977949.1| homoserine dehydrogenase [Achromobacter xylosoxidans A8]
gi|310759785|gb|ADP15234.1| homoserine dehydrogenase [Achromobacter xylosoxidans A8]
Length = 434
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + IL + I+I S I FL ++ +V + + +
Sbjct: 361 DDQPGVLADIARILADRSISIGSMIQQPSHIGGADIIFL-THEAVEGNVNQAIERIEALP 419
Query: 91 FVK 93
FV+
Sbjct: 420 FVR 422
>gi|307152012|ref|YP_003887396.1| Prephenate dehydratase [Cyanothece sp. PCC 7822]
gi|306982240|gb|ADN14121.1| Prephenate dehydratase [Cyanothece sp. PCC 7822]
Length = 287
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 30/77 (38%), Gaps = 9/77 (11%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQST-EHAISFLCIDGSILNS----VLEKLSV 85
+ G +V I + GIN++ ++ + + F+ ++ SI + L +L+
Sbjct: 204 KNEPGALVKALQIFADRGINLSRIESRPTKRSLGEYLFFVDLENSISDDSTQAALAQLAN 263
Query: 86 NVTIRFV----KQFEFN 98
I + + +
Sbjct: 264 CTEIIKIFGSYRILKIE 280
>gi|254421579|ref|ZP_05035297.1| acetolactate synthase, small subunit [Synechococcus sp. PCC 7335]
gi|196189068|gb|EDX84032.1| acetolactate synthase, small subunit [Synechococcus sp. PCC 7335]
Length = 172
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + D ++ + +
Sbjct: 3 HTLSVLVEDESGVLTRIAGLFARRGFNIESLAVGPAEEAGISRITMVVPGDDLVIEQLAK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 63 QLYKLINVLKVQDIT 77
>gi|300711470|ref|YP_003737284.1| acetolactate synthase, small subunit [Halalkalicoccus jeotgali B3]
gi|299125153|gb|ADJ15492.1| acetolactate synthase, small subunit [Halalkalicoccus jeotgali B3]
Length = 224
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 5/90 (5%)
Query: 10 IKIQEINFDVDIGRLMICIVN--ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
I+I + + I + G++ ++ NI +G + + E +
Sbjct: 32 IRIDP-EVEAEPVPRRTVISALVENEPGVLAKASGLVSRRQFNIESLTVGTTTNPETSRI 90
Query: 68 FLCIDGSIL--NSVLEKLSVNVTIRFVKQF 95
L I+ V ++L + + V++
Sbjct: 91 TLVIEEPEPGIRQVEKQLEKLLPVISVQEL 120
>gi|255720931|ref|XP_002545400.1| acetolactate synthase small subunit, mitochondrial precursor
[Candida tropicalis MYA-3404]
gi|240135889|gb|EER35442.1| acetolactate synthase small subunit, mitochondrial precursor
[Candida tropicalis MYA-3404]
Length = 301
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
+ ++ + + G++ V L G NI + ++ + + + + ++
Sbjct: 69 APPKQHVLNCLVQNEPGVLSGVSGTLAARGFNIDSLVVCNTEVKDLSRMTIVLKGQDGVV 128
Query: 77 NSVLEKLSVNVTIRFV 92
++ V + V
Sbjct: 129 EQARRQIEDLVPVYAV 144
>gi|171777501|ref|ZP_02919223.1| hypothetical protein STRINF_00050 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
gi|171283211|gb|EDT48635.1| hypothetical protein STRINF_00050 [Streptococcus infantarius
subsp. infantarius ATCC BAA-102]
Length = 161
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LE 81
M+ + G++ +L +NI +G++ + + ID L V ++
Sbjct: 4 MLTAKLQNSTGVLNRFTGVLSRQQVNIESISVGQTMEDNVSRITIIIDVESLEEVEQIIK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V+
Sbjct: 64 QLNRLIDVLRVRDIT 78
>gi|146319541|ref|YP_001199253.1| acetolactate synthase 3 regulatory subunit [Streptococcus suis
05ZYH33]
gi|146321737|ref|YP_001201448.1| acetolactate synthase 3 regulatory subunit [Streptococcus suis
98HAH33]
gi|253752547|ref|YP_003025688.1| acetolactate synthase small subunit [Streptococcus suis SC84]
gi|253754373|ref|YP_003027514.1| acetolactate synthase small subunit [Streptococcus suis P1/7]
gi|253756307|ref|YP_003029447.1| acetolactate synthase small subunit [Streptococcus suis BM407]
gi|302024482|ref|ZP_07249693.1| acetolactate synthase 3 regulatory subunit [Streptococcus suis
05HAS68]
gi|330833509|ref|YP_004402334.1| acetolactate synthase 3 regulatory subunit [Streptococcus suis
ST3]
gi|145690347|gb|ABP90853.1| Acetolactate synthase, small (regulatory) subunit [Streptococcus
suis 05ZYH33]
gi|145692543|gb|ABP93048.1| Acetolactate synthase, small (regulatory) subunit [Streptococcus
suis 98HAH33]
gi|251816836|emb|CAZ52481.1| acetolactate synthase small subunit [Streptococcus suis SC84]
gi|251818771|emb|CAZ56609.1| acetolactate synthase small subunit [Streptococcus suis BM407]
gi|251820619|emb|CAR47377.1| acetolactate synthase small subunit [Streptococcus suis P1/7]
gi|292559156|gb|ADE32157.1| Acetolactate synthase, small subunit [Streptococcus suis GZ1]
gi|319758958|gb|ADV70900.1| acetolactate synthase 3 regulatory subunit [Streptococcus suis
JS14]
gi|329307732|gb|AEB82148.1| acetolactate synthase 3 regulatory subunit [Streptococcus suis
ST3]
Length = 158
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LE 81
M+ + G++ +L INI +G ++ + + +D + V ++
Sbjct: 4 MLTAKLRNSSGVLNRFTGVLSRRQINIESISVGPTEVDGISRVTVIVDVVSHDEVEQIIK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V+
Sbjct: 64 QLNRLIDVVRVRDLT 78
>gi|4741858|gb|AAD28738.1|AF118061_2 acetohydroxyacid synthase small subunit [Methanococcus
maripaludis]
Length = 161
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 33 ILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTIR 90
G++ + + NI+ +G +++ + A + + D ++L V+++L+ V +
Sbjct: 14 KPGVLQRISGLFTRRWFNISSMTVGSTENPDVARMTIVVQGDDTVLEQVVKQLNKLVEVV 73
Query: 91 FVKQFE 96
V
Sbjct: 74 KVTDLN 79
>gi|33240701|ref|NP_875643.1| acetolactate synthase 3 regulatory subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|33238229|gb|AAQ00296.1| Acetolactate synthase, small (regulatory) subunit
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 168
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G +++ + + D L + +
Sbjct: 3 HTLSVLVEDQSGALSRISGLFARRGFNINSLAVGPAEAEGISRLTMVVEGDHQTLQQMTK 62
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 63 QLDKLINVLKV 73
>gi|320334116|ref|YP_004170827.1| acetolactate synthase small subunit [Deinococcus maricopensis DSM
21211]
gi|319755405|gb|ADV67162.1| acetolactate synthase, small subunit [Deinococcus maricopensis
DSM 21211]
Length = 198
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSV 79
+I ++ D ++ + + G G NI +G +++ + + GS I+
Sbjct: 8 QDHLISVLVRDEPRVLTRITELFGRRGYNIKSLSVGATEAPGVSRMTFVVGGSKGIVEQA 67
Query: 80 LEKLSVNVTIRFV 92
+ ++ I V
Sbjct: 68 IRQVEKLHDIIKV 80
>gi|24215269|ref|NP_712750.1| acetolactate synthase small subunit [Leptospira interrogans
serovar Lai str. 56601]
gi|24196361|gb|AAN49768.1| acetolactate synthase small subunit [Leptospira interrogans
serovar Lai str. 56601]
Length = 161
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ I+ + G++ V + NI +G + + E + + + D + ++ V
Sbjct: 3 HILKILVNNHPGVMSHVSGLFTRRSYNIDSIAVGVTVNPEISSMVIVVKGDEATVDQVKR 62
Query: 82 KLSVNVTIRFV 92
+L + V
Sbjct: 63 QLLKLPDVLEV 73
>gi|148264187|ref|YP_001230893.1| amino acid-binding ACT domain-containing protein [Geobacter
uraniireducens Rf4]
gi|146397687|gb|ABQ26320.1| ACT domain protein [Geobacter uraniireducens Rf4]
Length = 143
Score = 36.9 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
I I + G + V ILGE GINI L + + D N+VL++
Sbjct: 6 ISIFIENKSGRLAEVTRILGEAGINIRALSLADTSDFGILRLIVN-DREKANNVLKE 61
>gi|261250547|ref|ZP_05943122.1| GTP pyrophosphokinase (p)ppGpp synthetase
II/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Vibrio orientalis CIP 102891]
gi|260939116|gb|EEX95103.1| GTP pyrophosphokinase (p)ppGpp synthetase
II/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Vibrio orientalis CIP 102891]
Length = 708
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 6/67 (8%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI----DGSILNSVLEKLSVN 86
+ G + + N++ + G NI L + + + D L ++ K+
Sbjct: 640 QNRQGALAELTNVISKTGSNIHG--LSTEERDGRLYTVTVLLTTKDRVHLAGIMRKIKAM 697
Query: 87 VTIRFVK 93
V+
Sbjct: 698 PHTLKVR 704
>gi|260768328|ref|ZP_05877262.1| transcriptional repressor protein TyrR [Vibrio furnissii CIP
102972]
gi|260616358|gb|EEX41543.1| transcriptional repressor protein TyrR [Vibrio furnissii CIP
102972]
gi|315180036|gb|ADT86950.1| transcriptional regulator TyrR [Vibrio furnissii NCTC 11218]
Length = 514
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + ++ ID + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKNIDLRGIEI--DVIGIIYLNCPDIDFETFSELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|242766422|ref|XP_002341167.1| mitochondrial acetolactate synthase small subunit, putative
[Talaromyces stipitatus ATCC 10500]
gi|218724363|gb|EED23780.1| mitochondrial acetolactate synthase small subunit, putative
[Talaromyces stipitatus ATCC 10500]
Length = 325
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ V IL G NI + ++ + + +
Sbjct: 91 PPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVADLSRMTIV--------- 141
Query: 80 LEKLSVNVTIRF 91
L +
Sbjct: 142 ---LRGLDGVVE 150
>gi|212528446|ref|XP_002144380.1| mitochondrial acetolactate synthase small subunit, putative
[Penicillium marneffei ATCC 18224]
gi|210073778|gb|EEA27865.1| mitochondrial acetolactate synthase small subunit, putative
[Penicillium marneffei ATCC 18224]
Length = 321
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ V IL G NI + ++ + + +
Sbjct: 87 PPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVADLSRMTIV--------- 137
Query: 80 LEKLSVNVTIRF 91
L +
Sbjct: 138 ---LRGLDGVVE 146
>gi|319638224|ref|ZP_07992987.1| homoserine dehydrogenase [Neisseria mucosa C102]
gi|317400497|gb|EFV81155.1| homoserine dehydrogenase [Neisseria mucosa C102]
Length = 435
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 7/73 (9%), Positives = 21/73 (28%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSGYYLRVQATDEPGTLGQIAALLAKENVSIEALIQKGVIDQSTAEIVILTHTTV 404
Query: 76 LNSVLEKLSVNVT 88
+V ++
Sbjct: 405 ERNVKRAIAAIEA 417
>gi|306842083|ref|ZP_07474755.1| RelA/SpoT family protein [Brucella sp. BO2]
gi|306287833|gb|EFM59256.1| RelA/SpoT family protein [Brucella sp. BO2]
Length = 699
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + + I NI + + R+ + + + D LN ++
Sbjct: 625 RISVSAINSPGSLAEIAQIAAANDANIHNLSMVRTAP-DFTEMIIDVEVWDLKHLNRIIS 683
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 684 QLKESASVSSAKRVN 698
>gi|167764775|ref|ZP_02436896.1| hypothetical protein BACSTE_03166 [Bacteroides stercoris ATCC
43183]
gi|167697444|gb|EDS14023.1| hypothetical protein BACSTE_03166 [Bacteroides stercoris ATCC
43183]
Length = 187
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + + G++ V + INI ++ S + D + V +
Sbjct: 6 YTIIVHSENFAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDTIEKVTK 65
Query: 82 KLSVNVTIRFVKQFE 96
+++ + + F
Sbjct: 66 QITKKIDVLQAHYFT 80
>gi|148242791|ref|YP_001227948.1| acetolactate synthase 3 regulatory subunit [Synechococcus sp.
RCC307]
gi|147851101|emb|CAK28595.1| Acetolactate synthase small subunit [Synechococcus sp. RCC307]
Length = 176
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G + + + G NI +G ++ + + + D + L + +
Sbjct: 3 HTLSVLVEDESGALSRISGLFARRGFNIESLAVGPTEQDGVSRLTMVVAGDDNALEQMTK 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLLKLVNVLQV 73
>gi|145591716|ref|YP_001153718.1| amino acid-binding ACT domain-containing protein [Pyrobaculum
arsenaticum DSM 13514]
gi|145283484|gb|ABP51066.1| amino acid-binding ACT domain protein [Pyrobaculum arsenaticum
DSM 13514]
Length = 218
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
+ +N D GI+ + NI E+ +N+ + + S + + + + L++
Sbjct: 18 GEFLIELNFDQPGILATLSNIFAEHDVNVIN--VAIDSSRLTIHYIVDL-AVVADDQLKE 74
Query: 83 L-SVNVTIRFVKQFEF 97
+ FVK+ +
Sbjct: 75 IPKQLQMFAFVKKVRY 90
>gi|91794782|ref|YP_564433.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella
denitrificans OS217]
gi|91716784|gb|ABE56710.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella denitrificans OS217]
Length = 701
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 28/85 (32%), Gaps = 11/85 (12%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--- 67
+ + + + + + + G + + +I+ G NI + L +
Sbjct: 619 NVDGVEYQAN-----LRVEIVNHQGALAKITSIIAATGSNIHN--LSTEERDGRVYMINL 671
Query: 68 -FLCIDGSILNSVLEKLSVNVTIRF 91
D L +V+ ++ V +
Sbjct: 672 RIAVTDRVHLANVMRRIRVLPEVLR 696
>gi|33593740|ref|NP_881384.1| homoserine dehydrogenase [Bordetella pertussis Tohama I]
gi|33600911|ref|NP_888471.1| homoserine dehydrogenase [Bordetella bronchiseptica RB50]
gi|33563813|emb|CAE43057.1| homoserine dehydrogenase [Bordetella pertussis Tohama I]
gi|33568511|emb|CAE32423.1| homoserine dehydrogenase [Bordetella bronchiseptica RB50]
Length = 434
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + IL + I+I + + A ++ +V + + +
Sbjct: 361 DDQPGVLADIARILADRSISIGSM-IQQPARIGGADIIFLTHEAVEGNVNQAIEHIEALP 419
Query: 91 FVK 93
FV+
Sbjct: 420 FVR 422
>gi|120555153|ref|YP_959504.1| (p)ppGpp synthetase I, SpoT/RelA [Marinobacter aquaeolei VT8]
gi|120325002|gb|ABM19317.1| (p)ppGpp synthetase I, SpoT/RelA [Marinobacter aquaeolei VT8]
Length = 745
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 33/96 (34%), Gaps = 17/96 (17%)
Query: 8 RFIKIQ-------EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
R I++ D++I D G++ + +L ++ + ++
Sbjct: 653 RIIEVNWGGQPAAVYPVDIEIEAY-------DRSGLLRDITQVLSSSRSDVLSLNTVTNK 705
Query: 61 STEHAISFLCIDGSILNSV---LEKLSVNVTIRFVK 93
A + ++ S L + L ++ I V+
Sbjct: 706 DENTATMRVTVEISSLEQLARLLAQIRNLPNIIDVR 741
>gi|309812240|ref|ZP_07705998.1| acetolactate synthase, small subunit [Dermacoccus sp. Ellin185]
gi|308433927|gb|EFP57801.1| acetolactate synthase, small subunit [Dermacoccus sp. Ellin185]
Length = 172
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--IL 76
+ R ++ ++ + G++ + ++ G NI +G ++ + + +D L
Sbjct: 1 MTTNRHILSVLVENKSGVLARISGLISRRGFNIHSLAVGETEDPHVSRMTVTVDADDVAL 60
Query: 77 NSVLEKLSVNVTIRFV 92
V+++L+ V + V
Sbjct: 61 EQVVKQLNKLVEVLKV 76
>gi|302872395|ref|YP_003841031.1| amino acid-binding ACT domain protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575254|gb|ADL43045.1| amino acid-binding ACT domain protein [Caldicellulosiruptor
obsidiansis OB47]
Length = 150
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKL 83
+ +V DI GI+ + NI+ + NI + A + I + SV + +
Sbjct: 72 TLALVLKDIPGILSKILNIISDTNANILTIN-QNIPLGGIATVSISIRTSGMTKSVKDLI 130
Query: 84 SVNVTIRFVKQFEF 97
+ VK+ E
Sbjct: 131 LEIEKVDGVKKIEI 144
>gi|326469855|gb|EGD93864.1| mitochondrial acetolactate synthase small subunit [Trichophyton
tonsurans CBS 112818]
gi|326479078|gb|EGE03088.1| acetolactate synthase small subunit [Trichophyton equinum CBS
127.97]
Length = 340
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ + IL G NI + ++ + + +
Sbjct: 95 PPKRHVLNCLVQNEPGVLSRISGILAARGFNIDSLVVCNTEVEDLSRMTIV--------- 145
Query: 80 LEKLSVNVTIRF 91
L +
Sbjct: 146 ---LRGLDGVVE 154
>gi|327294587|ref|XP_003231989.1| acetolactate synthase small subunit [Trichophyton rubrum CBS
118892]
gi|326465934|gb|EGD91387.1| acetolactate synthase small subunit [Trichophyton rubrum CBS
118892]
Length = 340
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ + IL G NI + ++ + + +
Sbjct: 95 PPKRHVLNCLVQNEPGVLSRISGILAARGFNIDSLVVCNTEVEDLSRMTIV--------- 145
Query: 80 LEKLSVNVTIRF 91
L +
Sbjct: 146 ---LRGLDGVVE 154
>gi|315056597|ref|XP_003177673.1| acetolactate synthase small subunit [Arthroderma gypseum CBS
118893]
gi|311339519|gb|EFQ98721.1| acetolactate synthase small subunit [Arthroderma gypseum CBS
118893]
Length = 345
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ + IL G NI + ++ + + +
Sbjct: 100 PPKRHVLNCLVQNEPGVLSRISGILAARGFNIDSLVVCNTEVEDLSRMTIV--------- 150
Query: 80 LEKLSVNVTIRF 91
L +
Sbjct: 151 ---LRGLDGVVE 159
>gi|302661358|ref|XP_003022348.1| hypothetical protein TRV_03559 [Trichophyton verrucosum HKI 0517]
gi|291186288|gb|EFE41730.1| hypothetical protein TRV_03559 [Trichophyton verrucosum HKI 0517]
Length = 355
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ + IL G NI + ++ + + +
Sbjct: 110 PPKRHVLNCLVQNEPGVLSRISGILAARGFNIDSLVVCNTEVEDLSRMTIV--------- 160
Query: 80 LEKLSVNVTIRF 91
L +
Sbjct: 161 ---LRGLDGVVE 169
>gi|302500182|ref|XP_003012085.1| hypothetical protein ARB_01593 [Arthroderma benhamiae CBS 112371]
gi|291175641|gb|EFE31445.1| hypothetical protein ARB_01593 [Arthroderma benhamiae CBS 112371]
Length = 339
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ + IL G NI + ++ + + +
Sbjct: 94 PPKRHVLNCLVQNEPGVLSRISGILAARGFNIDSLVVCNTEVEDLSRMTIV--------- 144
Query: 80 LEKLSVNVTIRF 91
L +
Sbjct: 145 ---LRGLDGVVE 153
>gi|303316586|ref|XP_003068295.1| Acetolactate synthase small subunit, mitochondrial precursor,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240107976|gb|EER26150.1| Acetolactate synthase small subunit, mitochondrial precursor,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|320038078|gb|EFW20014.1| mitochondrial acetolactate synthase small subunit [Coccidioides
posadasii str. Silveira]
Length = 348
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ + IL G NI + ++ + + +
Sbjct: 93 PPKRHVLNCLVQNEPGVLSRISGILAARGFNIDSLVVCNTEVEDLSRMTIV--------- 143
Query: 80 LEKLSVNVTIRF 91
L +
Sbjct: 144 ---LRGLDGVVE 152
>gi|240280096|gb|EER43600.1| mitochondrial acetolactate synthase small subunit [Ajellomyces
capsulatus H143]
Length = 296
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ + IL G NI + ++ + + +
Sbjct: 40 PPKRHVLNCLVQNEPGVLSRISGILAARGFNIDSLVVCNTEVEDLSRMTIV--------- 90
Query: 80 LEKLSVNVTIRF 91
L +
Sbjct: 91 ---LRGLDGVVE 99
>gi|239610808|gb|EEQ87795.1| mitochondrial acetolactate synthase small subunit [Ajellomyces
dermatitidis ER-3]
gi|327350341|gb|EGE79198.1| mitochondrial acetolactate synthase small subunit [Ajellomyces
dermatitidis ATCC 18188]
Length = 335
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ + IL G NI + ++ + + +
Sbjct: 88 PPKRHVLNCLVQNEPGVLSRISGILAARGFNIDSLVVCNTEVEDLSRMTIV--------- 138
Query: 80 LEKLSVNVTIRF 91
L +
Sbjct: 139 ---LRGLDGVVE 147
>gi|261206442|ref|XP_002627958.1| mitochondrial acetolactate synthase small subunit [Ajellomyces
dermatitidis SLH14081]
gi|239593017|gb|EEQ75598.1| mitochondrial acetolactate synthase small subunit [Ajellomyces
dermatitidis SLH14081]
Length = 335
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ + IL G NI + ++ + + +
Sbjct: 88 PPKRHVLNCLVQNEPGVLSRISGILAARGFNIDSLVVCNTEVEDLSRMTIV--------- 138
Query: 80 LEKLSVNVTIRF 91
L +
Sbjct: 139 ---LRGLDGVVE 147
>gi|296827002|ref|XP_002851083.1| acetolactate synthase small subunit [Arthroderma otae CBS 113480]
gi|238838637|gb|EEQ28299.1| acetolactate synthase small subunit [Arthroderma otae CBS 113480]
Length = 333
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ + IL G NI + ++ + + +
Sbjct: 88 PPKRHVLNCLVQNEPGVLSRISGILAARGFNIDSLVVCNTEVEDLSRMTIV--------- 138
Query: 80 LEKLSVNVTIRF 91
L +
Sbjct: 139 ---LRGLDGVVE 147
>gi|258566159|ref|XP_002583824.1| acetolactate synthase small subunit [Uncinocarpus reesii 1704]
gi|237907525|gb|EEP81926.1| acetolactate synthase small subunit [Uncinocarpus reesii 1704]
Length = 303
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ + IL G NI + ++ + + +
Sbjct: 97 PPKRHVLNCLVQNEPGVLSRISGILAARGFNIDSLVVCNTEVEDLSRMTIV--------- 147
Query: 80 LEKLSVNVTIRF 91
L +
Sbjct: 148 ---LRGLDGVVE 156
>gi|225560533|gb|EEH08814.1| acetolactate synthase [Ajellomyces capsulatus G186AR]
gi|325088816|gb|EGC42126.1| acetolactate synthase small subunit [Ajellomyces capsulatus H88]
Length = 336
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ + IL G NI + ++ + + +
Sbjct: 89 PPKRHVLNCLVQNEPGVLSRISGILAARGFNIDSLVVCNTEVEDLSRMTIV--------- 139
Query: 80 LEKLSVNVTIRF 91
L +
Sbjct: 140 ---LRGLDGVVE 148
>gi|154278607|ref|XP_001540117.1| mitochondrial acetolactate synthase small subunit [Ajellomyces
capsulatus NAm1]
gi|150413702|gb|EDN09085.1| mitochondrial acetolactate synthase small subunit [Ajellomyces
capsulatus NAm1]
Length = 336
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ + IL G NI + ++ + + +
Sbjct: 89 PPKRHVLNCLVQNEPGVLSRISGILAARGFNIDSLVVCNTEVEDLSRMTIV--------- 139
Query: 80 LEKLSVNVTIRF 91
L +
Sbjct: 140 ---LRGLDGVVE 148
>gi|119188067|ref|XP_001244640.1| hypothetical protein CIMG_04081 [Coccidioides immitis RS]
Length = 348
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R ++ + + G++ + IL G NI + ++ + + +
Sbjct: 93 PPKRHVLNCLVQNEPGVLSRISGILAARGFNIDSLVVCNTEVEDLSRMTIV--------- 143
Query: 80 LEKLSVNVTIRF 91
L +
Sbjct: 144 ---LRGLDGVVE 152
>gi|78044625|ref|YP_360422.1| acetolactate synthase 3 regulatory subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996740|gb|ABB15639.1| acetolactate synthase, small subunit [Carboxydothermus
hydrogenoformans Z-2901]
Length = 164
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ + +L NI G S+ + + D +L V+
Sbjct: 3 HTLSVLVLNKPGVLARISGLLSRRMFNIESITAGYSEEPNITRITIVVQGDDLVLEQVIN 62
Query: 82 KLSVNVTIRFVKQFEFN 98
+LS + + +K+
Sbjct: 63 QLSKLIDVIKIKELPME 79
>gi|45657287|ref|YP_001373.1| acetolactate synthase 3 regulatory subunit [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|45600525|gb|AAS70010.1| acetolactate synthase small subunit [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
Length = 161
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ I+ + G++ V + NI +G + + E + + + D + ++ V
Sbjct: 3 HILKILVNNHPGVMSHVSGLFTRRSYNIDSIAVGVTVNPEISSMVIVVKGDEATVDQVKR 62
Query: 82 KLSVNVTIRFV 92
+L + V
Sbjct: 63 QLLKLPDVLEV 73
>gi|33597067|ref|NP_884710.1| homoserine dehydrogenase [Bordetella parapertussis 12822]
gi|33566518|emb|CAE37774.1| homoserine dehydrogenase [Bordetella parapertussis]
Length = 434
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + IL + I+I + + A ++ +V + + +
Sbjct: 361 DDQPGVLADIARILADRSISIGSM-IQQPARIGGADIIFLTHEAVEGNVNQAIEHIEALP 419
Query: 91 FVK 93
FV+
Sbjct: 420 FVR 422
>gi|70731792|ref|YP_261534.1| GTP pyrophosphokinase [Pseudomonas fluorescens Pf-5]
gi|68346091|gb|AAY93697.1| GTP pyrophosphokinase [Pseudomonas fluorescens Pf-5]
Length = 747
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEK 82
I I D G++ V +L IN+ + ++ A+ L I+ L++ +L +
Sbjct: 672 IIIRAYDRSGLLRDVSQVLLNERINVLAVNTRSNKEDNTALMSLTIEIPGLDALGRLLGR 731
Query: 83 LSVNVTIRFVK 93
+S I +
Sbjct: 732 ISQLPNIIETR 742
>gi|114561551|ref|YP_749064.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella
frigidimarina NCIMB 400]
gi|114332844|gb|ABI70226.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella frigidimarina NCIMB
400]
Length = 702
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF---LCIDGSIL-NSVLE 81
+ + + G + + +I+ G NI + L + + + + +V+
Sbjct: 630 LRVEIVNHQGALAKITSIIASAGSNIHN--LSTEERDGRVYLINLRISVKDRVHLANVMR 687
Query: 82 KLSVNVTIRF 91
++ V +
Sbjct: 688 RIRVLPEVLR 697
>gi|325957852|ref|YP_004289318.1| acetolactate synthase, small subunit [Methanobacterium sp. AL-21]
gi|325329284|gb|ADZ08346.1| acetolactate synthase, small subunit [Methanobacterium sp. AL-21]
Length = 166
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 33 ILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVNVTIR 90
G++ V + G NI +G S++ A + D +L + ++L+ + +
Sbjct: 16 KPGVLQRVAGLFTRRGFNIETITVGPSENEGLARMTIISKGDEKVLEQITKQLNKLIDVI 75
Query: 91 FVKQFE 96
V+ E
Sbjct: 76 KVRDLE 81
>gi|320101029|ref|YP_004176621.1| amino acid-binding ACT domain-containing protein [Desulfurococcus
mucosus DSM 2162]
gi|319753381|gb|ADV65139.1| amino acid-binding ACT domain protein [Desulfurococcus mucosus DSM
2162]
Length = 240
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 29/89 (32%), Gaps = 12/89 (13%)
Query: 8 RFIKIQEINFDVDIGRLMIC--IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ + I D+ +++ + N + G V ++ +L +NI S
Sbjct: 154 KLVNHDPIWVKADVSAIVVISPVENIETPGFVSYITTLLARRKVNILQIMSAHSD----- 208
Query: 66 ISFLCIDGSILNSVLEKLSVNV-TIRFVK 93
+ + +D LE + +
Sbjct: 209 -TIIVVDRG---DALEAFKALETAVARAR 233
>gi|302529807|ref|ZP_07282149.1| homoserine dehydrogenase [Streptomyces sp. AA4]
gi|302438702|gb|EFL10518.1| homoserine dehydrogenase [Streptomyces sp. AA4]
Length = 444
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNVT 88
D G++ V +G++IA + + + + A + + ++ +++++
Sbjct: 372 DRAGVLAQVAQAFAAHGVSIAA--VRQRDANDTASLVVVTHLAPDAALQSTVDEIAKLDV 429
Query: 89 IRFV 92
+ V
Sbjct: 430 VHEV 433
>gi|260892147|ref|YP_003238244.1| acetolactate synthase, small subunit [Ammonifex degensii KC4]
gi|260864288|gb|ACX51394.1| acetolactate synthase, small subunit [Ammonifex degensii KC4]
Length = 164
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V N+ G NI +G ++ + + + D ++ V
Sbjct: 3 HTLSVLVENHPGVLARVANLFRRRGYNIESLAVGSTEDPAFSRMTIVVEGDDRVIEQVTR 62
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 63 QLDKLIEVIKV 73
>gi|145588682|ref|YP_001155279.1| chorismate mutase [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145047088|gb|ABP33715.1| chorismate mutase [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 359
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 5 GKPRFIKIQEINFDVDIGRLM-ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ RF+ + + + + + G V + L ++G+++ F ++
Sbjct: 258 NRTRFVVVGKYACQSTGKDQTSLVLSVDNQPGAVHRLLAPLAKHGVSMNRFESRPARKGT 317
Query: 64 HAISF-LCIDGSILNS-VLEKLSVNVTI 89
F + I G + V++ L +
Sbjct: 318 WEYHFYIDIAGHADDDKVVKALEELKGV 345
>gi|81300899|ref|YP_401107.1| homoserine dehydrogenase [Synechococcus elongatus PCC 7942]
gi|81169780|gb|ABB58120.1| homoserine dehydrogenase [Synechococcus elongatus PCC 7942]
Length = 445
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL---CIDGSILNSVLEKLSVNV 87
D G++ VG I GE GI++ + S E A + + I+ + +L
Sbjct: 375 QDSPGVIGKVGTIFGEQGISLESI-VQTDVSGETAELVVITHEVQEGIMRQAITQLEALP 433
Query: 88 TI 89
+
Sbjct: 434 LV 435
>gi|87312251|ref|ZP_01094351.1| homoserine dehydrogenase [Blastopirellula marina DSM 3645]
gi|87285027|gb|EAQ76961.1| homoserine dehydrogenase [Blastopirellula marina DSM 3645]
Length = 433
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 3/67 (4%)
Query: 31 ADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAIS--FLCIDGSILNSVLEKLSVNV 87
D G++ + ILGE+ I+IA ++A+ + + L V
Sbjct: 358 DDRPGVLAEIATILGEHHISIASVIQHEPDYEGDNAVVALIIMTHTATDGDADAALEDIV 417
Query: 88 TIRFVKQ 94
+ V+
Sbjct: 418 RLDSVRA 424
>gi|254568944|ref|XP_002491582.1| 3-phosphoglycerate dehydrogenase, catalyzes the first step in
serine and glycine biosynthesis [Pichia pastoris GS115]
gi|238031379|emb|CAY69302.1| 3-phosphoglycerate dehydrogenase, catalyzes the first step in
serine and glycine biosynthesis [Pichia pastoris GS115]
gi|328351912|emb|CCA38311.1| D-3-phosphoglycerate dehydrogenase [Pichia pastoris CBS 7435]
Length = 469
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 28/74 (37%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI---SFLCIDGSILNSVLE 81
+ ++ ++ G++ V NILG + NI + A +D S + S+ E
Sbjct: 399 RVLYIHQNVPGVLKTVNNILGNH--NIEKQFS--DSRGDIAYLMADISDVDASDIKSLYE 454
Query: 82 KLSVNVTIRFVKQF 95
+L +
Sbjct: 455 QLEHTPYKIVTRLL 468
>gi|227537611|ref|ZP_03967660.1| possible acetolactate synthase [Sphingobacterium spiritivorum
ATCC 33300]
gi|300771002|ref|ZP_07080879.1| acetolactate synthase [Sphingobacterium spiritivorum ATCC 33861]
gi|227242497|gb|EEI92512.1| possible acetolactate synthase [Sphingobacterium spiritivorum
ATCC 33300]
gi|300762275|gb|EFK59094.1| acetolactate synthase [Sphingobacterium spiritivorum ATCC 33861]
Length = 196
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 5/76 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
I + + +G++ + I INI + S+ + I VL
Sbjct: 4 QEFTITLYTENSIGLIGRISTIFSRRKINIESLNTSPSEVEGIHRFTIVITE--TEEVLR 61
Query: 82 KL-SVNVTIRFVKQFE 96
KL + V +
Sbjct: 62 KLCRQLE--KQVDVLK 75
>gi|184200610|ref|YP_001854817.1| homoserine dehydrogenase [Kocuria rhizophila DC2201]
gi|183580840|dbj|BAG29311.1| homoserine dehydrogenase [Kocuria rhizophila DC2201]
Length = 438
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQS-TEHAISFLCIDGSILNSV---LEKLSVNV 87
D LG++ + + ++G++I+ T ++ L + +E L
Sbjct: 364 DRLGVLARLAQVFADHGVSISTMQQSEDPRVTGTSLLRLVTHSGRHADLMATVEALRSLP 423
Query: 88 TIRFV 92
+R V
Sbjct: 424 VVRDV 428
>gi|158423999|ref|YP_001525291.1| acetolactate synthase small subunit [Azorhizobium caulinodans ORS
571]
gi|158330888|dbj|BAF88373.1| acetolactate synthase small subunit [Azorhizobium caulinodans ORS
571]
Length = 171
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 5/81 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + ++ + G++ V + G NI + H +S + I + V+E
Sbjct: 9 ERHTLSVLVDNEPGVLARVIGLFSGRGYNIDSLTVSEVSHEGH-LSRITIVTTGTPMVIE 67
Query: 82 KLSV----NVTIRFVKQFEFN 98
++ V + V+
Sbjct: 68 QIRNQLDRLVPVHRVRDLTVE 88
>gi|126727766|ref|ZP_01743597.1| homoserine dehydrogenase [Rhodobacterales bacterium HTCC2150]
gi|126703022|gb|EBA02124.1| homoserine dehydrogenase [Rhodobacterales bacterium HTCC2150]
Length = 110
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 3/90 (3%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
F ++ I + + D G + V LG+ G++I
Sbjct: 10 FGQPAANLVEAP-IAITATPAAYYLRMELMDKPGALAKVAKSLGDAGVSIDRMRQYSHND 68
Query: 62 TEHAISFLC--IDGSILNSVLEKLSVNVTI 89
+ + + + L++ L+ L+ +
Sbjct: 69 PTAPVLIVTHKTNRTELDTALKNLTKTDMV 98
>gi|45358214|ref|NP_987771.1| acetolactate synthase 3 regulatory subunit [Methanococcus
maripaludis S2]
gi|44920971|emb|CAF30207.1| Acetohydroxyacid synthase small subunit [Methanococcus
maripaludis S2]
Length = 169
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 33 ILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTIR 90
G++ + + NI+ +G +++ + A + + D ++L V+++L+ V +
Sbjct: 14 KPGVLQRISGLFTRRWFNISSMTVGSTENPDVARMTIVVQGDDTVLEQVVKQLNKLVEVV 73
Query: 91 FVKQFE 96
V
Sbjct: 74 KVTDLN 79
>gi|242279242|ref|YP_002991371.1| acetolactate synthase, small subunit [Desulfovibrio salexigens
DSM 2638]
gi|242122136|gb|ACS79832.1| acetolactate synthase, small subunit [Desulfovibrio salexigens
DSM 2638]
Length = 90
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 24/67 (35%), Gaps = 1/67 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKLSVNVTI 89
+ G++ + + N+ G + L + D S L ++ +L +
Sbjct: 13 RNHAGVMSQITGLFSRRNFNLEGIICGPVGDGGQSRMILTVADDSKLEQIMLQLEKLYDV 72
Query: 90 RFVKQFE 96
V+Q E
Sbjct: 73 LKVEQVE 79
>gi|171913899|ref|ZP_02929369.1| acetolactate synthase, small subunit, putative [Verrucomicrobium
spinosum DSM 4136]
Length = 136
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 24/63 (38%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ I D G + + L + G+++ H+ R + S + D +L+ +
Sbjct: 69 TLLICLEDRPGALARIAMRLRDAGLDLRSMHILRREEGSTFASLVASDNRKAAEILKDVL 128
Query: 85 VNV 87
V
Sbjct: 129 VVD 131
>gi|153009135|ref|YP_001370350.1| acetolactate synthase 3 regulatory subunit [Ochrobactrum anthropi
ATCC 49188]
gi|151561023|gb|ABS14521.1| acetolactate synthase, small subunit [Ochrobactrum anthropi ATCC
49188]
Length = 190
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ ++ + G++ V + G NI + ++ +H +S + I V
Sbjct: 20 TPETHTLAVLVDNEPGVLARVIGLFSGRGYNIESLTVSETEHEKH-LSRITIVTRGTPHV 78
Query: 80 LEKLS 84
L+++
Sbjct: 79 LDQIR 83
>gi|150388803|ref|YP_001318852.1| MgtC/SapB transporter [Alkaliphilus metalliredigens QYMF]
gi|149948665|gb|ABR47193.1| MgtC/SapB transporter [Alkaliphilus metalliredigens QYMF]
Length = 235
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 29/76 (38%), Gaps = 8/76 (10%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS-FLCI-------DGSIL 76
++ + + G++ +G+ILG+ INI + + + E + I I
Sbjct: 148 LLIVQGKERAGLIGNIGHILGKNNINIKYIKVNNEDNIEEDEGYMIEIRFMVKLPSKFIN 207
Query: 77 NSVLEKLSVNVTIRFV 92
+++ + V
Sbjct: 208 ERFFDEILDVPGVDNV 223
>gi|325681196|ref|ZP_08160726.1| acetolactate synthase, small subunit [Ruminococcus albus 8]
gi|324107118|gb|EGC01404.1| acetolactate synthase, small subunit [Ruminococcus albus 8]
Length = 165
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLG--RSQSTEHAISFLCIDGSILNSVLE 81
I ++ + G++ + + G NI +G +S D + + +
Sbjct: 3 HTISVLVENHSGVLSRISGLFSRRGFNIESLAVGPTNDESISRITIVADGDDHTVEQIEK 62
Query: 82 KLSVNVTIRFVKQF 95
+L+ + + VK F
Sbjct: 63 QLNKLIEVIKVKTF 76
>gi|56752012|ref|YP_172713.1| homoserine dehydrogenase [Synechococcus elongatus PCC 6301]
gi|56686971|dbj|BAD80193.1| homoserine dehydrogenase [Synechococcus elongatus PCC 6301]
Length = 432
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL---CIDGSILNSVLEKLSVNV 87
D G++ VG I GE GI++ + S E A + + I+ + +L
Sbjct: 362 QDSPGVIGKVGTIFGEQGISLESI-VQTDVSGETAELVVITHEVQEGIMRQAITQLEALP 420
Query: 88 TI 89
+
Sbjct: 421 LV 422
>gi|225375957|ref|ZP_03753178.1| hypothetical protein ROSEINA2194_01594 [Roseburia inulinivorans DSM
16841]
gi|225212210|gb|EEG94564.1| hypothetical protein ROSEINA2194_01594 [Roseburia inulinivorans DSM
16841]
Length = 147
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL----NSVL 80
+ I D G++ V + ++ NI H + A L ID ++
Sbjct: 71 TMVIQMDDEPGLLSGVLKTIADFHANILTIHQSIPVN-GIATLTLSIDILPQTGDVAEMV 129
Query: 81 EKLSVNVTIRFVKQF 95
K+ I++VK
Sbjct: 130 TKIESVGGIQYVKIL 144
>gi|218885262|ref|YP_002434583.1| acetolactate synthase 3 regulatory subunit [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|218756216|gb|ACL07115.1| acetolactate synthase, small subunit [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 163
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLE 81
++ ++ + G++ V + G NI ++ + ++ + G I+ +++
Sbjct: 3 HVLSVLVENEPGVLSRVAGLFSGRGFNIESLNVAPTLEEGVSLMTITTSGEEQIIEQIVK 62
Query: 82 KLSVNVTIRFV 92
+L VT+ V
Sbjct: 63 QLRKLVTVIKV 73
>gi|56697868|ref|YP_168239.1| aspartate kinase, monofunctional class [Ruegeria pomeroyi DSS-3]
gi|56679605|gb|AAV96271.1| aspartate kinase, monofunctional class [Ruegeria pomeroyi DSS-3]
Length = 412
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 21/77 (27%), Gaps = 4/77 (5%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
M + D G+ + N L E G+N+ + + V
Sbjct: 265 EAKMTVVSVQDRPGVAATIFNALSEGGVNV-DMIVQNVSEEGITDMTF---SCPTDQVAR 320
Query: 82 KLSVNVTIRFVKQFEFN 98
++ + EF
Sbjct: 321 AEKAMNAVKDAGELEFE 337
>gi|302392351|ref|YP_003828171.1| MgtC/SapB transporter [Acetohalobium arabaticum DSM 5501]
gi|302204428|gb|ADL13106.1| MgtC/SapB transporter [Acetohalobium arabaticum DSM 5501]
Length = 226
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NSVLEK 82
+ I D G + +G++LG++ ++I + ++ ++ L + N V+
Sbjct: 150 LRIKAYDQPGEIGKIGSVLGDHNVHILDLSIDHIRNEQNIYINLRVRLPADFDANQVIPH 209
Query: 83 LSVNVTIRFV 92
L+ + V
Sbjct: 210 LTQTTGVIQV 219
>gi|77165912|ref|YP_344437.1| homoserine dehydrogenase [Nitrosococcus oceani ATCC 19707]
gi|254433153|ref|ZP_05046661.1| Homoserine dehydrogenase, NAD binding domain family [Nitrosococcus
oceani AFC27]
gi|76884226|gb|ABA58907.1| homoserine dehydrogenase [Nitrosococcus oceani ATCC 19707]
gi|207089486|gb|EDZ66757.1| Homoserine dehydrogenase, NAD binding domain family [Nitrosococcus
oceani AFC27]
Length = 436
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 9/85 (10%), Positives = 31/85 (36%), Gaps = 4/85 (4%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ + ++ + + + D G++ V + G+ I+I + E+ +
Sbjct: 339 LVDLPILSMEEVKTAYYLRMRAMDEPGVLAEVTRVFGDQSISIEAILQKEPAAGENHVPI 398
Query: 69 LCIDGSILN----SVLEKLSVNVTI 89
+ + +L + ++ +I
Sbjct: 399 IMLTQPVLERNMNEAIRRIEALESI 423
>gi|117925053|ref|YP_865670.1| homoserine dehydrogenase [Magnetococcus sp. MC-1]
gi|117608809|gb|ABK44264.1| homoserine dehydrogenase [Magnetococcus sp. MC-1]
Length = 439
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D G++ + IL E+ ++I EH + +L+ ++ +
Sbjct: 364 DRPGVLADITAILKEHRVSIDAIVQKERSPVEHVPLVIVTHEVTERQILDTVAAIEKMDS 423
Query: 92 V----KQFEFN 98
V +
Sbjct: 424 VSDKPRMIRIE 434
>gi|317055216|ref|YP_004103683.1| acetolactate synthase small subunit [Ruminococcus albus 7]
gi|315447485|gb|ADU21049.1| acetolactate synthase, small subunit [Ruminococcus albus 7]
Length = 165
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLG--RSQSTEHAISFLCIDGSILNSVLE 81
I ++ + G++ + + G NI +G +S D + + +
Sbjct: 3 HTISVLVENHSGVLSRISGLFSRRGFNIESLAVGPTNDESISRITIVADGDEHTVEQIEK 62
Query: 82 KLSVNVTIRFVKQF 95
+L+ + + VK F
Sbjct: 63 QLNKLIEVIKVKTF 76
>gi|302533635|ref|ZP_07285977.1| prephenate dehydrogenase [Streptomyces sp. C]
gi|302442530|gb|EFL14346.1| prephenate dehydrogenase [Streptomyces sp. C]
Length = 362
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 8/84 (9%), Positives = 30/84 (35%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+++ + + + + +D G + + G G+NI + + + + L
Sbjct: 279 VRVPGKHGAAPMAYETVGVFISDKPGELARIFADAGRAGVNIEDVRIEHATGQQAGLVQL 338
Query: 70 CIDGSILNSVLEKLSVNVTIRFVK 93
++ + ++ +L +
Sbjct: 339 MVEPRAVAALTTELRERGWALRQR 362
>gi|238916335|ref|YP_002929852.1| chorismate mutase [Eubacterium eligens ATCC 27750]
gi|238871695|gb|ACR71405.1| chorismate mutase [Eubacterium eligens ATCC 27750]
Length = 149
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 5/86 (5%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
+V + + D G++ V + E+ NI H A L +D
Sbjct: 60 FRENVKGKTITFVLSMDDEPGLLSLVLKKVAEFKANILTIH-QTIPVNGIASLTLSVDIL 118
Query: 75 I----LNSVLEKLSVNVTIRFVKQFE 96
+ ++E++ +R++K
Sbjct: 119 PTTGDSSEMIEQIERLKGVRYLKILS 144
>gi|87301084|ref|ZP_01083925.1| acetolactate synthase III small subunit [Synechococcus sp. WH
5701]
gi|87284052|gb|EAQ76005.1| acetolactate synthase III small subunit [Synechococcus sp. WH
5701]
Length = 176
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G ++ H+ + D L + +
Sbjct: 3 HTLSVLVQDESGALSRISGLFARRGFNIESLAVGPAEQRGHSRLTMVVEGDDHTLEQMTK 62
Query: 82 KLSVNVTIRFV 92
+L+ V + V
Sbjct: 63 QLNKLVNVLNV 73
>gi|302387920|ref|YP_003823742.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium saccharolyticum WM1]
gi|302198548|gb|ADL06119.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium saccharolyticum WM1]
Length = 774
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEKLS 84
I + +G+ V + + E I+I + R+ A + D + + ++KL
Sbjct: 703 IFANNRIGMFVDISKVFTERQIDITSMN-SRTNKQGKATITMTFDIHGVEELRKLVDKLR 761
Query: 85 VNVTIRFV 92
+ +
Sbjct: 762 QIEGVIDI 769
>gi|289677069|ref|ZP_06497959.1| GTP pyrophosphokinase [Pseudomonas syringae pv. syringae FF5]
Length = 116
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 3 SDGKP-RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+P R I++ V + I I D G++ V +L IN+ + ++
Sbjct: 17 GGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVTQVLLNERINVLAVNTRSNKE 76
Query: 62 TEHAISFLCIDGSILNS---VLEKLSVNVTIRFVK 93
A+ L I+ L++ +L ++S I +
Sbjct: 77 DNTALMSLTIEIPGLDALGRLLGRISQLPNIIETR 111
>gi|189485572|ref|YP_001956513.1| homoserine dehydrogenase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287531|dbj|BAG14052.1| homoserine dehydrogenase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 427
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/71 (9%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIA-HFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ + IL ++ ++IA + + + ++ + ++ +I
Sbjct: 356 IDKPDVLSKISGILSKFKVSIARSLAQFNISKKNYGRISIITHETYSENIEKAINAIKSI 415
Query: 90 RFVKQFEFNVD 100
K + ++
Sbjct: 416 TKSKTVKIKIE 426
>gi|124028140|ref|YP_001013460.1| hypothetical protein Hbut_1285 [Hyperthermus butylicus DSM 5456]
gi|123978834|gb|ABM81115.1| Acetolactate synthase, small (regulatory) subunit [Hyperthermus
butylicus DSM 5456]
Length = 137
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Query: 18 DVDIGRLMIC---IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
+ G + I D+ G + + + L E ++ + E+A + ID S
Sbjct: 48 PLPGGGENLYELRIEFKDVPGALARISSKLAELDVDQVATQCTTVKRGENAECIIIIDLS 107
Query: 75 IL----NSVLEKLSVNVTIRFV 92
+ + +LS + FV
Sbjct: 108 KSTRSIDEIKSELSAMEDVHFV 129
>gi|58259379|ref|XP_567102.1| d-3-phosphoglycerate dehydrogenase 2 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223239|gb|AAW41283.1| d-3-phosphoglycerate dehydrogenase 2, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 508
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 28/86 (32%), Gaps = 8/86 (9%)
Query: 10 IKIQEINFDV---DIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ E++ R +C V+ + G++ + NIL ++ NI + A
Sbjct: 419 VNFPEVDLRAITAADERHIRVCHVHKNEPGVLRGINNILADH--NIEKQFS--DSKGDIA 474
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRF 91
I G V S R
Sbjct: 475 YLMADISGVGQEEVEGLYSAIKNTRS 500
>gi|88855490|ref|ZP_01130154.1| prephenate dehydrogenase [marine actinobacterium PHSC20C1]
gi|88815397|gb|EAR25255.1| prephenate dehydrogenase [marine actinobacterium PHSC20C1]
Length = 360
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 25/60 (41%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ ++ D G + + +GE +N+ L S + ++ + + +++ +L
Sbjct: 291 LVVMVDDKPGELARLLTEIGEAHVNMEDLRLEHSPGAQFGLAEISVLPEKEATLISELEA 350
>gi|320582466|gb|EFW96683.1| Type II myosin heavy chain [Pichia angusta DL-1]
Length = 2075
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG--SIL 76
+ ++ + + G++ V L G NI + ++ + + + +DG +++
Sbjct: 1845 APKNQHVLNCLVQNEPGVLSLVSGTLAARGFNIDSLVVCNTEVKDLSRMTIVLDGQDAVI 1904
Query: 77 NSVLEKLSVNVTIRFV 92
++ V + V
Sbjct: 1905 EQARRQIEDLVPVYAV 1920
>gi|220905166|ref|YP_002480478.1| acetolactate synthase, small subunit [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869465|gb|ACL49800.1| acetolactate synthase, small subunit [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 163
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ ++ + G++ V + G NI ++ + + + D IL +++
Sbjct: 5 HVLSVLVENEPGVLSRVAGLFSGRGFNIHSLNVAPALEEGVSHMTITTEGDSLILEQIMK 64
Query: 82 KLSVNVTIRFV 92
+L V++ V
Sbjct: 65 QLHKIVSVIKV 75
>gi|218199587|gb|EEC82014.1| hypothetical protein OsI_25968 [Oryza sativa Indica Group]
gi|222637019|gb|EEE67151.1| hypothetical protein OsJ_24217 [Oryza sativa Japonica Group]
Length = 529
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 5/73 (6%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-SVL-E 81
I D ++ + +LGE G+NI H + +++ +DG VL +
Sbjct: 140 HEIIFACDDKPKLLSQLTALLGELGLNIQEAHAFSTSDG-YSLDIFVVDGWSHEVDVLRD 198
Query: 82 KLSVNVTIRFVKQ 94
L + +K
Sbjct: 199 ALRR--GVEKIKY 209
>gi|152991295|ref|YP_001357017.1| homoserine dehydrogenase [Nitratiruptor sp. SB155-2]
gi|151423156|dbj|BAF70660.1| homoserine dehydrogenase [Nitratiruptor sp. SB155-2]
Length = 420
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
D GI+ + +I GEY I+I L + A L + + + L+
Sbjct: 349 EDRPGILAKIASIFGEYNISIESM-LQKPGPDRLAHLLLSTHQCQESEIHKALNEIKQ 405
>gi|159900988|ref|YP_001547235.1| (p)ppGpp synthetase I SpoT/RelA [Herpetosiphon aurantiacus ATCC
23779]
gi|159894027|gb|ABX07107.1| (p)ppGpp synthetase I, SpoT/RelA [Herpetosiphon aurantiacus ATCC
23779]
Length = 751
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 11/88 (12%)
Query: 17 FDVDIGRLM--------ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
DVD G I I D +G+ V N + + INI ++ A
Sbjct: 653 IDVDWGGTTEKQSYPVPIRIEAWDRVGLWRDVTNAIADGNINIQAVQQLDNKHHGRATLL 712
Query: 69 LCI-DGSILN--SVLEKLSVNVTIRFVK 93
I SI +L+KL+ + +
Sbjct: 713 ATIRIESIDQLSRILDKLNRVKDVIEAR 740
>gi|77460438|ref|YP_349945.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Pseudomonas fluorescens Pf0-1]
gi|77384441|gb|ABA75954.1| GTP pyrophosphokinase [Pseudomonas fluorescens Pf0-1]
Length = 747
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEK 82
I I D G++ V +L IN+ + ++ A+ L I+ L++ +L +
Sbjct: 672 IVIRAYDRSGLLRDVSQVLLNERINVLAVNTRSNKEDNTALMSLTIEIPGLDALGRLLGR 731
Query: 83 LSVNVTIRFVK 93
+S I +
Sbjct: 732 ISQLPNIIETR 742
>gi|115472051|ref|NP_001059624.1| Os07g0475900 [Oryza sativa Japonica Group]
gi|34393850|dbj|BAC83504.1| putative serine/threonine protein kinase [Oryza sativa Japonica
Group]
gi|113611160|dbj|BAF21538.1| Os07g0475900 [Oryza sativa Japonica Group]
gi|215694671|dbj|BAG89862.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 438
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 5/73 (6%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-SVL-E 81
I D ++ + +LGE G+NI H + +++ +DG VL +
Sbjct: 49 HEIIFACDDKPKLLSQLTALLGELGLNIQEAHAFSTSDG-YSLDIFVVDGWSHEVDVLRD 107
Query: 82 KLSVNVTIRFVKQ 94
L + +K
Sbjct: 108 ALRR--GVEKIKY 118
>gi|330811209|ref|YP_004355671.1| GTP diphosphokinase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379317|gb|AEA70667.1| GTP diphosphokinase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 748
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEK 82
I I D G++ V +L IN+ + ++ A+ L I+ L++ +L +
Sbjct: 672 IVIRAYDRSGLLRDVSQVLLNERINVLAVNTRSNKEDNTALMSLTIEIPGLDALGRLLGR 731
Query: 83 LSVNVTIRFVK 93
+S I +
Sbjct: 732 ISQLPNIIETR 742
>gi|225848347|ref|YP_002728510.1| ACT domain protein [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643283|gb|ACN98333.1| ACT domain protein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 172
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 9/74 (12%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---- 79
I + +D GIV V +L + INIA ++ + + I I S+
Sbjct: 91 YNIIVYGSDKPGIVYNVSKLLADNSINIADLRTEKTNE----LYVMFIQAEIPESLDLKK 146
Query: 80 -LEKLSVNVTIRFV 92
+++ I V
Sbjct: 147 FEKEIENLKNILNV 160
>gi|210623779|ref|ZP_03294039.1| hypothetical protein CLOHIR_01990 [Clostridium hiranonis DSM 13275]
gi|210153361|gb|EEA84367.1| hypothetical protein CLOHIR_01990 [Clostridium hiranonis DSM 13275]
Length = 405
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 34/99 (34%), Gaps = 16/99 (16%)
Query: 1 VFSDGKP------RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHF 54
V S G R I + + R+ + + D G V +I+ E G NI
Sbjct: 304 VVSGGNVDVNTLYRII---GVALAKEGRRVSLKVNMNDKPGNFTKVTSIISEAGANILSA 360
Query: 55 HLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVK 93
+ G S + + +LE L I+ VK
Sbjct: 361 NQGSLASGD------SLTEQSAEFILETL-DFDHIKRVK 392
>gi|268317356|ref|YP_003291075.1| Prephenate dehydrogenase [Rhodothermus marinus DSM 4252]
gi|262334890|gb|ACY48687.1| Prephenate dehydrogenase [Rhodothermus marinus DSM 4252]
Length = 373
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS-VLEKLS 84
+ + D G + + L E G+NI L + + L E L
Sbjct: 300 VYVRIEDRPGALYRITRTLYEAGLNIQDIELLKVREGTGGTFRLGFATEADADRACEALR 359
Query: 85 V 85
Sbjct: 360 Q 360
>gi|77919113|ref|YP_356928.1| protein-P-II uridylyltransferase [Pelobacter carbinolicus DSM 2380]
gi|77545196|gb|ABA88758.1| protein-P-II uridylyltransferase [Pelobacter carbinolicus DSM 2380]
Length = 906
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
+ IV D+ G+ + ++ YGINI + A L + G
Sbjct: 717 YTQLTIVTHDMPGLFTMITGVMAAYGINIFGAQIFTQ-RDGTAFDILQVKGP 767
>gi|323699386|ref|ZP_08111298.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio sp. ND132]
gi|323459318|gb|EGB15183.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio desulfuricans
ND132]
Length = 866
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 6/70 (8%)
Query: 17 FDVDIGR----LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ GR + I D + + L +G+NI + A+ +
Sbjct: 670 IEAAPGRAEKTFRLTIAAVDQPRLFATIAGALSLHGLNILAADIFTW-KDGTAVDVFTV- 727
Query: 73 GSILNSVLEK 82
G ++ +
Sbjct: 728 GEPPENLYAE 737
>gi|113868242|ref|YP_726731.1| homoserine dehydrogenase [Ralstonia eutropha H16]
gi|113527018|emb|CAJ93363.1| homoserine dehydrogenase [Ralstonia eutropha H16]
Length = 436
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS-----VLEKLSVN 86
D G++ + IL E GI+I L + + + I I + K+
Sbjct: 362 DETGVLAEITRILAEGGISIDAM-LQKESREGEPQTDIIILTHITREKHVNAAIAKIEAL 420
Query: 87 VTIRFV 92
T+
Sbjct: 421 PTVLSA 426
>gi|39997406|ref|NP_953357.1| malate oxidoreductase [Geobacter sulfurreducens PCA]
gi|39984297|gb|AAR35684.1| malate oxidoreductase [Geobacter sulfurreducens PCA]
gi|298506343|gb|ADI85066.1| malate oxidoreductase, NAD-dependent [Geobacter sulfurreducens
KN400]
Length = 446
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHL---GRSQSTEHAISFLCIDGSILNSVLE 81
+ ++ D G + + +G G NI L G + + ++ D + +L+
Sbjct: 13 TLRVMITDQPGYLGRLTTAIGSEGGNIGDIRLISSGLTHNIREITVYVDNDQHL-EMILK 71
Query: 82 KLSVNVTIR 90
++ +
Sbjct: 72 AVAAVEGVI 80
>gi|261855991|ref|YP_003263274.1| homoserine dehydrogenase [Halothiobacillus neapolitanus c2]
gi|261836460|gb|ACX96227.1| Homoserine dehydrogenase [Halothiobacillus neapolitanus c2]
Length = 449
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----S 78
+ + D G++ + L ++GINI + + + + +
Sbjct: 365 GYYLRLTVLDQPGVLANIARTLADFGINIEAMIQKEASDETLHLPIVLLTHPMREAIMND 424
Query: 79 VLEKLSVNVTI 89
+E L +
Sbjct: 425 AIESLQALDEV 435
>gi|225018492|ref|ZP_03707684.1| hypothetical protein CLOSTMETH_02439 [Clostridium methylpentosum
DSM 5476]
gi|224948693|gb|EEG29902.1| hypothetical protein CLOSTMETH_02439 [Clostridium methylpentosum
DSM 5476]
Length = 162
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLEKLSVNVT 88
+ G++ V + G NI +G ++ T + + +DG V ++L+ +
Sbjct: 10 ENHPGVLSRVSGLFSRRGFNIESLAVGVTEDTTMSRITIVVDGDNRTIEQVEKQLNKLID 69
Query: 89 IRFVK 93
+ VK
Sbjct: 70 VIKVK 74
>gi|293333562|ref|NP_001168069.1| hypothetical protein LOC100381801 [Zea mays]
gi|223945819|gb|ACN26993.1| unknown [Zea mays]
Length = 353
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLE 81
+ I+ D G++ V + G NI +G ++ + + G++ + +++
Sbjct: 184 HTLSILVNDCPGVLNIVTGVFARRGYNIQSLAVGSAEKEGISRITTVVPGTVESIGKLVQ 243
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V
Sbjct: 244 QLYKLIDVHEVHDIT 258
>gi|221639833|ref|YP_002526095.1| homoserine dehydrogenase [Rhodobacter sphaeroides KD131]
gi|221160614|gb|ACM01594.1| Homoserine dehydrogenase [Rhodobacter sphaeroides KD131]
Length = 410
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
D G + + LGE GI+I + HA + + + + +S
Sbjct: 339 DKPGALAKIATALGEAGISIDRMRQYGHE-GGHAPVLIVTHKASRDDISHAIS 390
>gi|163739747|ref|ZP_02147155.1| acetolactate synthase, small subunit [Phaeobacter gallaeciensis
BS107]
gi|163743095|ref|ZP_02150477.1| acetolactate synthase small subunit [Phaeobacter gallaeciensis
2.10]
gi|161383512|gb|EDQ07899.1| acetolactate synthase small subunit [Phaeobacter gallaeciensis
2.10]
gi|161386977|gb|EDQ11338.1| acetolactate synthase, small subunit [Phaeobacter gallaeciensis
BS107]
Length = 186
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R I I+ + G++ V + G NI + T H +S + I + V+E
Sbjct: 27 ERHTITILVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGH-LSRITIVTTGTPQVIE 85
Query: 82 KLSV-NVTIRFVKQFE 96
++ I V +
Sbjct: 86 QIKAQLGRIVSVHEVT 101
>gi|160934830|ref|ZP_02082216.1| hypothetical protein CLOLEP_03705 [Clostridium leptum DSM 753]
gi|156866283|gb|EDO59655.1| hypothetical protein CLOLEP_03705 [Clostridium leptum DSM 753]
Length = 143
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
I I D G IL ++ I + + + S+ A + +D +E L
Sbjct: 72 IGIGINDRPGEFSKAMRILADHHITVEYMYAFISRDKGKAFVIIRVDN--DEKAMEALRD 129
>gi|119944399|ref|YP_942079.1| prephenate dehydratase [Psychromonas ingrahamii 37]
gi|119863003|gb|ABM02480.1| Prephenate dehydratase [Psychromonas ingrahamii 37]
Length = 276
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 21/76 (27%), Gaps = 4/76 (5%)
Query: 24 LMICIVN-ADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ + N D G++ + E +N+ F+ IDG + ++
Sbjct: 194 TTLVVKNEKDSPGVLGNIVAAFAEQKVNLTSIMSRPTKSEFGKYHFFIDIDGHQEDPDVD 253
Query: 82 KLSVNVTIRFVKQFEF 97
I
Sbjct: 254 --RALQQIMRQHPVTI 267
>gi|134107457|ref|XP_777613.1| hypothetical protein CNBA7340 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260307|gb|EAL22966.1| hypothetical protein CNBA7340 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 510
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 28/86 (32%), Gaps = 8/86 (9%)
Query: 10 IKIQEINFDV---DIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ E++ R +C V+ + G++ + NIL ++ NI + A
Sbjct: 419 VNFPEVDLRAITAADERHIRVCHVHKNEPGVLRGINNILADH--NIEKQFS--DSKGDIA 474
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRF 91
I G V S R
Sbjct: 475 YLMADISGVGQEEVEGLYSAIKNTRS 500
>gi|237756962|ref|ZP_04585426.1| GTP pyrophosphokinase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237690878|gb|EEP60022.1| GTP pyrophosphokinase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 350
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEKLSVNVT 88
D GI+ V N + NI++ + +S + I + + + LN +L+ +
Sbjct: 280 EDKPGILANVSNAVANSKSNISNARVQTLKSGKAIIDLTIQVRNKEHLNGILKSIKNTPG 339
Query: 89 IRFV-KQFE 96
+ V + +
Sbjct: 340 VFSVSRVLK 348
>gi|254475198|ref|ZP_05088584.1| acetolactate synthase, small subunit [Ruegeria sp. R11]
gi|214029441|gb|EEB70276.1| acetolactate synthase, small subunit [Ruegeria sp. R11]
Length = 186
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R I I+ + G++ V + G NI + T H +S + I + V+E
Sbjct: 27 ERHTITILVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGH-LSRITIVTTGTPQVIE 85
Query: 82 KLSV-NVTIRFVKQFE 96
++ I V +
Sbjct: 86 QIKAQLGRIVSVHEVT 101
>gi|319943311|ref|ZP_08017594.1| homoserine dehydrogenase [Lautropia mirabilis ATCC 51599]
gi|319743853|gb|EFV96257.1| homoserine dehydrogenase [Lautropia mirabilis ATCC 51599]
Length = 436
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 5/66 (7%), Positives = 22/66 (33%), Gaps = 4/66 (6%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE----KLSVN 86
D G++ + I+ + G++I + + + + + ++ +
Sbjct: 361 RDEPGVLADITRIMADEGVSIDAMLQRQPSEGANTTDIILMTHRTVEKCIDIASRHIEAL 420
Query: 87 VTIRFV 92
++
Sbjct: 421 PSVTAA 426
>gi|313672169|ref|YP_004050280.1| amino acid-binding act domain protein [Calditerrivibrio
nitroreducens DSM 19672]
gi|312938925|gb|ADR18117.1| amino acid-binding ACT domain protein [Calditerrivibrio
nitroreducens DSM 19672]
Length = 175
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 8/87 (9%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
+++ I + AD GIV V L + INI + + I + ++ +
Sbjct: 85 EIEGESYSISVYGADKAGIVYNVSKFLSDRKINIVDLQTKVAGKKDKPIYIMILEVIVPK 144
Query: 78 SV----LEKLSVNV---TI-RFVKQFE 96
V +++L I VK E
Sbjct: 145 GVDGGWIDQLKEISRGMGIDISVKSIE 171
Score = 34.2 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ V+ D GIV V +L E G NI + I + I + ++KL
Sbjct: 6 YALTFVSEDRPGIVSDVTKVLYENGFNIEDSSSTLLRGIFAMILIVSTREDIDEAAIQKL 65
>gi|256396882|ref|YP_003118446.1| acetolactate synthase, small subunit [Catenulispora acidiphila
DSM 44928]
gi|256363108|gb|ACU76605.1| acetolactate synthase, small subunit [Catenulispora acidiphila
DSM 44928]
Length = 207
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNS 78
+ R + ++ + G++ V + NI +G ++ + + + ++ L
Sbjct: 1 MSRHTLSVLVENKPGVLTRVAGLFARRAFNIESLAVGPTEHEDVSRITLVVTVEDHPLEQ 60
Query: 79 VLEKLSVNVTIRFV 92
V ++L+ V + +
Sbjct: 61 VTKQLNKLVNVLKI 74
>gi|225467894|ref|XP_002263102.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 453
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I D ++ + +IL E G+NI H S ++ +DG E+L
Sbjct: 282 HEITFSTVDKPKLLSQLTSILAEVGLNIQEAHAF-STVDGFSLDVFVVDGWPYEET-EQL 339
Query: 84 S 84
Sbjct: 340 R 340
>gi|254461532|ref|ZP_05074948.1| homoserine dehydrogenase [Rhodobacterales bacterium HTCC2083]
gi|206678121|gb|EDZ42608.1| homoserine dehydrogenase [Rhodobacteraceae bacterium HTCC2083]
Length = 417
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ + D G + + ILGE GI+I E A + + +
Sbjct: 333 ASPAPFYLRVGLKDKPGAMAKIATILGEAGISIDRMRQLGHAD-ETAPVLIVTHKCMRQT 391
Query: 79 VLEKLSVN--VTIRFVKQFEFNVD 100
+ E L+ + + ++
Sbjct: 392 LDEALTQIGKSEVVATRPVALRIE 415
>gi|156837641|ref|XP_001642841.1| hypothetical protein Kpol_387p9 [Vanderwaltozyma polyspora DSM
70294]
gi|156113415|gb|EDO14983.1| hypothetical protein Kpol_387p9 [Vanderwaltozyma polyspora DSM
70294]
Length = 470
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI---SFLCIDGSILNSVLE 81
+ ++ ++ G++ V NIL + NI S E A ++ S + S+ +
Sbjct: 400 RVLYIHKNVPGVLKTVNNILSNH--NIEKQFS--DSSGEIAYLMADIADVNQSDIKSIYD 455
Query: 82 KLSVNVTIRFVKQF 95
+L+ ++
Sbjct: 456 ELNKTPEKISIRLL 469
>gi|147773471|emb|CAN77952.1| hypothetical protein VITISV_038394 [Vitis vinifera]
Length = 355
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I D ++ + +IL E G+NI H S ++ +DG E+L
Sbjct: 180 HEITFSTVDKPKLLSQLTSILAEVGLNIQEAHAF-STVDGFSLDVFVVDGWPYEET-EQL 237
Query: 84 S 84
Sbjct: 238 R 238
>gi|221133317|ref|ZP_03559622.1| UTP-GlnB uridylyltransferase, GlnD [Glaciecola sp. HTCC2999]
Length = 876
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 6/53 (11%), Positives = 18/53 (33%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
+ I D + + ++L ++I ++ + S + +D
Sbjct: 689 AGTELLIYGKDRPAVFAQIASVLDNANLSILDANIAITPDGYVFDSIIVVDED 741
>gi|78044718|ref|YP_361036.1| GTP pyrophosphokinase [Carboxydothermus hydrogenoformans Z-2901]
gi|77996833|gb|ABB15732.1| GTP pyrophosphokinase [Carboxydothermus hydrogenoformans Z-2901]
Length = 716
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 10/91 (10%)
Query: 8 RFIKIQ---EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
R +++ I + + I D G + + +L E I+ A++ GRS
Sbjct: 625 RLVEVNWEGAIELPFTV---RLEIRGHDRAGFLNDILGVLAEQKIS-ANYVSGRSTKNGG 680
Query: 65 AISFLCIDGSI---LNSVLEKLSVNVTIRFV 92
A+ L ++ L + +KL + V
Sbjct: 681 AVVDLALEVKNINQLKQITDKLEKVRGVTEV 711
>gi|302342815|ref|YP_003807344.1| homoserine dehydrogenase [Desulfarculus baarsii DSM 2075]
gi|301639428|gb|ADK84750.1| homoserine dehydrogenase [Desulfarculus baarsii DSM 2075]
Length = 435
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 31 ADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVNV 87
D G++ + +L E+ I+I A GR ++ I L + + + L +++
Sbjct: 363 QDKPGVLAAISAVLAEHRISIEAVIQKGREEAGPVPIVMLTHEANEAAVQRALARINALP 422
>gi|197118572|ref|YP_002138999.1| ACT domain-containing protein [Geobacter bemidjiensis Bem]
gi|197087932|gb|ACH39203.1| ACT domain protein [Geobacter bemidjiensis Bem]
Length = 143
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
I I + G + V ILG+ G+NI L + + D SVL+
Sbjct: 6 ISIFIENKFGRLAEVTRILGDAGVNIRTLSLADTSDFGILRLIVN-DAEKAKSVLK 60
Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ D G + + +L GIN+ + + + E+A+ D +E L+
Sbjct: 74 VEIPDRPGGLADILQVLDAGGINVEYMYAFVERCGENAVMIFRFDE--TQKAIEALTA 129
>gi|255021633|ref|ZP_05293676.1| Acetolactate synthase small subunit [Acidithiobacillus caldus
ATCC 51756]
gi|254969021|gb|EET26540.1| Acetolactate synthase small subunit [Acidithiobacillus caldus
ATCC 51756]
Length = 164
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I I+ + G + V + G NI + + + + I+ VL+
Sbjct: 6 HIISILLENESGALSRVAGLFSARGYNIEAMTVAPTHDASISRMTVVTRGSEEIMEQVLK 65
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + V
Sbjct: 66 QLNKLVEVIRVHDLT 80
>gi|224476497|ref|YP_002634103.1| prephenate dehydrogenase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222421104|emb|CAL27918.1| putative prephenate dehydrogenase [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 364
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ + D G++ V +ILG + I+I++ ++ ++ E L I +
Sbjct: 298 LYVDIPDEPGMISKVTSILGLHNISISNINI--VEAREDIYGALRISFKSPEDRESGIKS 355
Query: 86 N 86
Sbjct: 356 L 356
>gi|190345691|gb|EDK37618.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 464
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI---SFLCIDGSILNSVLE 81
+ ++ ++ G++ V NIL + NI + A +D + + S+ E
Sbjct: 394 RVLYIHQNVPGVLKTVNNILSNH--NIEKQFS--DSRGDVAYLMADISDVDLADIKSLYE 449
Query: 82 KLSVNVTIRFVKQF 95
+L +
Sbjct: 450 QLEQTPYKIATRLL 463
>gi|167461331|ref|ZP_02326420.1| acetolactate synthase 3 regulatory subunit [Paenibacillus larvae
subsp. larvae BRL-230010]
gi|322383966|ref|ZP_08057696.1| acetolactate synthase 3 regulatory subunit-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321151443|gb|EFX44630.1| acetolactate synthase 3 regulatory subunit-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 163
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLE 81
I I+ + G++ V + G G NI +G S+ + + D + L + +
Sbjct: 5 HTISILVNNQPGVLQRVSGLFGRRGFNIESITVGESEEIGLSRMVVVANGDDTTLEQISK 64
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 65 QLYKLVDVIKV 75
>gi|167623464|ref|YP_001673758.1| transcriptional regulator TyrR [Shewanella halifaxensis HAW-EB4]
gi|167353486|gb|ABZ76099.1| transcriptional regulator, TyrR [Shewanella halifaxensis HAW-EB4]
Length = 515
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D +G+ + I+ +YGIN+ + F + +L+ +L + +
Sbjct: 9 DRVGLAKDILLIMEDYGINLFAIDASNQ--GFLYLQFAEVSFDMLSELLPLIRKVEGVHD 66
Query: 92 VKQFEF 97
V+ F
Sbjct: 67 VRTVSF 72
>gi|55379208|ref|YP_137058.1| hypothetical protein rrnAC2554 [Haloarcula marismortui ATCC 43049]
gi|55231933|gb|AAV47352.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 167
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ + AD GIV V + + ++GI+I + T+ ++ D + ++ ++
Sbjct: 97 TVTVRAADESGIVSTVTSAIADHGISIRQVLSEDPEFTDEPKLYVITDEELPGDLINEIR 156
Query: 85 VNVTIRFVKQFEF 97
FV+ E
Sbjct: 157 RL---AFVRTIEL 166
>gi|313672853|ref|YP_004050964.1| act domain protein [Calditerrivibrio nitroreducens DSM 19672]
gi|312939609|gb|ADR18801.1| ACT domain protein [Calditerrivibrio nitroreducens DSM 19672]
Length = 143
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL---CIDGSILNSVLEKLSVNVT 88
D+ G + V +L +N+ + + +S++ A+ +D ++ +
Sbjct: 78 DVPGGLASVLKVLSANDVNVEYMYAFVEKSSDFAVMIFRFDEVDKALDALEKNGIKTIEG 137
Query: 89 IR 90
++
Sbjct: 138 VK 139
>gi|269126350|ref|YP_003299720.1| (p)ppGpp synthetase I SpoT/RelA [Thermomonospora curvata DSM 43183]
gi|268311308|gb|ACY97682.1| (p)ppGpp synthetase I, SpoT/RelA [Thermomonospora curvata DSM
43183]
Length = 807
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 28/86 (32%), Gaps = 9/86 (10%)
Query: 15 INFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
I+ + +V+ D ++ V +L + +NI + + A+S
Sbjct: 714 IDVKWSPSEDSVFLVSIQMEALDRPRLLSDVTRVLSDQHVNILSASV-TTTRDRVAVSRF 772
Query: 70 CIDGSILN---SVLEKLSVNVTIRFV 92
+ VL+ + + V
Sbjct: 773 TFEMGDPKHLGHVLKAVRSVDGVYDV 798
>gi|262199001|ref|YP_003270210.1| (p)ppGpp synthetase I, SpoT/RelA [Haliangium ochraceum DSM 14365]
gi|262082348|gb|ACY18317.1| (p)ppGpp synthetase I, SpoT/RelA [Haliangium ochraceum DSM 14365]
Length = 728
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLSVNVT 88
+ G++ + + G+NI H R+ A++ D S L V+ LS
Sbjct: 657 NQPGLLAHLSQSFSDSGVNITQAHC-RAGEDGRAVNTFHANVRDLSQLKQVMRSLSRIKG 715
Query: 89 IRFVKQFE 96
+ V +
Sbjct: 716 VFSVDRVS 723
>gi|77463974|ref|YP_353478.1| homoserine dehydrogenase [Rhodobacter sphaeroides 2.4.1]
gi|77388392|gb|ABA79577.1| homoserine dehydrogenase [Rhodobacter sphaeroides 2.4.1]
Length = 428
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
D G + + LGE GI+I + HA + + + + +S
Sbjct: 357 DKPGALAKIATALGEAGISIDRMRQYGHE-GGHAPVLIVTHKASRDDISHAIS 408
>gi|329961514|ref|ZP_08299595.1| acetolactate synthase, small subunit [Bacteroides fluxus YIT
12057]
gi|328531726|gb|EGF58555.1| acetolactate synthase, small subunit [Bacteroides fluxus YIT
12057]
Length = 186
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + + G++ V + INI ++ S + D + + V +
Sbjct: 7 YTIIVHSENFAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKATIEKVTK 66
Query: 82 KLSVNVTIRFVKQFE 96
+++ + + F
Sbjct: 67 QITKKIDVLQAHYFT 81
>gi|218779550|ref|YP_002430868.1| amino acid-binding ACT domain protein [Desulfatibacillum
alkenivorans AK-01]
gi|218760934|gb|ACL03400.1| amino acid-binding ACT domain protein [Desulfatibacillum
alkenivorans AK-01]
Length = 143
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
D G ++ V ++L G+NI + + + +A+ D +E L
Sbjct: 77 MDQPGGLLAVLDLLNGAGVNIEYMYAYANPPGGNAVMIFRFDRM--EDAIELLKN 129
>gi|89069161|ref|ZP_01156534.1| acetolactate synthase, small subunit [Oceanicola granulosus
HTCC2516]
gi|89045334|gb|EAR51400.1| acetolactate synthase, small subunit [Oceanicola granulosus
HTCC2516]
Length = 187
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + ++ + G++ V + G NI + T H +S + I + V+E
Sbjct: 27 ERHTLAVLVENEPGVLARVIGLFSGRGYNIESLTVAEVDHTGH-LSRITIVTTGTPQVIE 85
Query: 82 KLSV-NVTIRFVKQFE 96
++ I V
Sbjct: 86 QIKAQVGRIVPVHAVH 101
>gi|94310904|ref|YP_584114.1| homoserine dehydrogenase [Cupriavidus metallidurans CH34]
gi|93354756|gb|ABF08845.1| homoserine dehydrogenase [Cupriavidus metallidurans CH34]
Length = 436
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 3/87 (3%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
+ + D + + +D G++ + IL E GI+I L + +
Sbjct: 338 ELSNVPVLPIDEVTSSYYLRMRVSDETGVLAEITRILAEAGISIDAM-LQKESREGEPQT 396
Query: 68 FLCIDGSILNS--VLEKLSVNVTIRFV 92
+ I + V + ++ V
Sbjct: 397 DIIILTHLTREKHVNAAIRSIEALQTV 423
>gi|294678577|ref|YP_003579192.1| homoserine dehydrogenase [Rhodobacter capsulatus SB 1003]
gi|294477397|gb|ADE86785.1| homoserine dehydrogenase [Rhodobacter capsulatus SB 1003]
Length = 432
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 24/71 (33%), Gaps = 3/71 (4%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ + D G + V +LGE G++I+ + + + L +
Sbjct: 349 APAPYYLRLELMDKPGALAKVAAVLGEAGVSISRMR--QYGHEDTSAPVLIVTHKTTRDA 406
Query: 80 LE-KLSVNVTI 89
++ ++
Sbjct: 407 IDVAIAALPAT 417
>gi|148905795|gb|ABR16061.1| unknown [Picea sitchensis]
Length = 901
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ V ++L + GI I ++ + IDGS+ SV+ S +
Sbjct: 819 IDRKGMLAEVTSVLAKAGILICACVAETDRTRGLGVMLFWIDGSM-ESVVRACSSVDAVH 877
Query: 91 FV 92
V
Sbjct: 878 GV 879
>gi|149190152|ref|ZP_01868428.1| acetolactate synthase III small subunit [Vibrio shilonii AK1]
gi|148836041|gb|EDL53002.1| acetolactate synthase III small subunit [Vibrio shilonii AK1]
Length = 164
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+I ++ + G + V + + G NI ++ + + +S L I LE++
Sbjct: 3 HIISLLMENQPGALSRVVGLFSQRGYNIESLNVSPTD--DETLSRLNITTESDEMELEQI 60
Query: 84 S----VNVTIRFVKQF-EFN 98
+ + V++ EF+
Sbjct: 61 QKQLHKLIDVLKVQEVTEFD 80
>gi|72382603|ref|YP_291958.1| acetolactate synthase 3 regulatory subunit [Prochlorococcus
marinus str. NATL2A]
gi|124026310|ref|YP_001015426.1| acetolactate synthase 3 regulatory subunit [Prochlorococcus
marinus str. NATL1A]
gi|72002453|gb|AAZ58255.1| acetolactate synthase, small subunit [Prochlorococcus marinus
str. NATL2A]
gi|123961378|gb|ABM76161.1| Acetolactate synthase small subunit [Prochlorococcus marinus str.
NATL1A]
Length = 167
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
+ ++ D G + + + G NI +G +++ + + + G + +
Sbjct: 3 HTLSVLVEDESGALSRIAGLFARRGFNIDSLAVGPAEAKGISRLTMVVQGDESTLQQMTK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 63 QLNKLINVLEV 73
>gi|255710785|ref|XP_002551676.1| KLTH0A05038p [Lachancea thermotolerans]
gi|238933053|emb|CAR21234.1| KLTH0A05038p [Lachancea thermotolerans]
Length = 470
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ ++ D + + + ++ ++ G++ V NIL + NI S + A
Sbjct: 386 VSLRGLDLDQE-NVVRVLYIHHNVPGVLKTVNNILSNH--NIEKQFS--DSSGDIAYLMA 440
Query: 70 CIDGSIL---NSVLEKLSVNVTIRFVKQF 95
I + ++L+ ++
Sbjct: 441 DISSVNQSDIKDIYDQLNATEYKISIRLL 469
>gi|169604382|ref|XP_001795612.1| hypothetical protein SNOG_05203 [Phaeosphaeria nodorum SN15]
gi|160706553|gb|EAT87594.2| hypothetical protein SNOG_05203 [Phaeosphaeria nodorum SN15]
Length = 314
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 8/45 (17%), Positives = 19/45 (42%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ R ++ + + G++ V IL G NI + ++ +
Sbjct: 77 IPPKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVDD 121
>gi|117958129|gb|ABK59385.1| 3-phosphoglycerate dehydrogenase [Saccharomyces cerevisiae]
gi|117958131|gb|ABK59386.1| 3-phosphoglycerate dehydrogenase [Saccharomyces cerevisiae]
gi|117958133|gb|ABK59387.1| 3-phosphoglycerate dehydrogenase [Saccharomyces cerevisiae]
gi|117958135|gb|ABK59388.1| 3-phosphoglycerate dehydrogenase [Saccharomyces cerevisiae]
gi|117958138|gb|ABK59389.1| 3-phosphoglycerate dehydrogenase [Saccharomyces cerevisiae]
gi|151943089|gb|EDN61424.1| 3-phosphoglycerate dehydrogenase [Saccharomyces cerevisiae YJM789]
gi|190406289|gb|EDV09556.1| 3-phosphoglycerate dehydrogenase [Saccharomyces cerevisiae RM11-1a]
gi|256273726|gb|EEU08652.1| Ser33p [Saccharomyces cerevisiae JAY291]
gi|259147181|emb|CAY80434.1| Ser33p [Saccharomyces cerevisiae EC1118]
gi|323337182|gb|EGA78436.1| Ser33p [Saccharomyces cerevisiae Vin13]
gi|323348123|gb|EGA82377.1| Ser33p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354587|gb|EGA86423.1| Ser33p [Saccharomyces cerevisiae VL3]
Length = 469
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NSVLE 81
+ ++ ++ G++ V +IL ++ NI E A I + E
Sbjct: 399 RVLYIHRNVPGVLKTVNDILSDH--NIEKQFS--DSHGEIAYLMADISSVNQSEIKDIYE 454
Query: 82 KLSVNVTIRFVKQF 95
KL+ ++
Sbjct: 455 KLNQTSAKVSIRLL 468
>gi|306832754|ref|ZP_07465890.1| acetolactate synthase small subunit [Streptococcus bovis ATCC
700338]
gi|304425103|gb|EFM28233.1| acetolactate synthase small subunit [Streptococcus bovis ATCC
700338]
Length = 160
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LE 81
M+ + G++ +L +NI +G + + + ID L V ++
Sbjct: 4 MLTAKLQNSTGVLNRFTGVLSRRQVNIESISVGHTMEPNISRITIIIDVENLEEVEQIIK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V+
Sbjct: 64 QLNRLIDVLRVRDIT 78
>gi|300741296|ref|ZP_07071317.1| homoserine dehydrogenase [Rothia dentocariosa M567]
gi|300380481|gb|EFJ77043.1| homoserine dehydrogenase [Rothia dentocariosa M567]
Length = 427
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG++ + I E+GI++ A L + + + ++V +
Sbjct: 354 DDKLGVLANIARIFAEHGISVDSLRQST-PRDGAAQIRLVTHSAKDSDLRRAIAVIDGLD 412
Query: 91 FVKQF 95
V++
Sbjct: 413 TVREI 417
>gi|262155984|ref|ZP_06029104.1| formyltetrahydrofolate deformylase [Vibrio cholerae INDRE 91/1]
gi|262030162|gb|EEY48806.1| formyltetrahydrofolate deformylase [Vibrio cholerae INDRE 91/1]
Length = 329
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ + + + D G++ + NI ++ +NI H + ++ H ++G ++
Sbjct: 51 LSMEKKTLLTHCPDAPGLISKITNICYKHQLNIIHNNEFVDNASGHFFMRTELEGYFNDA 110
Query: 79 VLEKLSVNVTIR 90
L L+
Sbjct: 111 TL--LADLDHAL 120
>gi|300024976|ref|YP_003757587.1| UTP-GlnB uridylyltransferase [Hyphomicrobium denitrificans ATCC
51888]
gi|299526797|gb|ADJ25266.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
ATCC 51888]
Length = 932
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+P + IN ++ +I + D G++ + + L + ++IA H+ E A
Sbjct: 833 EPEIV----INNELSERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTF--GEKA 886
Query: 66 ISFLCIDGSILNSVLEKLSV 85
+ + V+ ++
Sbjct: 887 VDVFYVTDLTGKQVVSEVRQ 906
>gi|284033560|ref|YP_003383491.1| amino acid-binding ACT domain-containing protein [Kribbella
flavida DSM 17836]
gi|283812853|gb|ADB34692.1| amino acid-binding ACT domain protein [Kribbella flavida DSM
17836]
Length = 168
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 9/74 (12%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILN--SVLE 81
+ ++ D GI+ V +L + G+N+ + L R H + G + LE
Sbjct: 6 VTVIGPDRPGIIADVTEVLAQVGVNLEDSTMTLLR----GHFAMMIVCSGPLAPVREALE 61
Query: 82 KLSVNVTIRFVKQF 95
L + V++
Sbjct: 62 PLRG-ELVITVREI 74
>gi|294084105|ref|YP_003550863.1| (p)ppGpp synthetase I [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663678|gb|ADE38779.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Candidatus Puniceispirillum marinum IMCC1322]
Length = 709
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 23/60 (38%), Gaps = 5/60 (8%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
++ G + + ++G+ G NI++ +L + + +E L + +
Sbjct: 641 NVPGSLAALTTVIGQQGGNISNIYLIDRTPDFFSFQL-----ELDVKNVEHLRSIIGVLQ 695
>gi|225850169|ref|YP_002730403.1| GTP pyrophosphokinase [Persephonella marina EX-H1]
gi|225646582|gb|ACO04768.1| GTP pyrophosphokinase [Persephonella marina EX-H1]
Length = 716
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLEKLSV 85
I++ D G++ + + + NI+ ++ + + I N ++ +
Sbjct: 643 IISEDRPGLLAEMSSAVASTKTNISGANVKTRRDGKAVTELRVNVKDIDHLNRIISLIKR 702
Query: 86 NVTIRFVKQF 95
+ V +
Sbjct: 703 VKGVERVDRI 712
>gi|170751694|ref|YP_001757954.1| acetolactate synthase, small subunit [Methylobacterium
radiotolerans JCM 2831]
gi|170658216|gb|ACB27271.1| acetolactate synthase, small subunit [Methylobacterium
radiotolerans JCM 2831]
Length = 180
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 16 NFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
V+ R + ++ + G++ + + G NI + ++ H IS + I +
Sbjct: 11 PVRVEPVNRHTLAVIVDNEPGVLARISGMFSGRGYNIESLTVSETEEARH-ISRITIVTA 69
Query: 75 ILNSVLEKLSV 85
N+V+E++
Sbjct: 70 GTNAVIEQIKA 80
>gi|115379250|ref|ZP_01466365.1| formyltetrahydrofolate deformylase [Stigmatella aurantiaca
DW4/3-1]
gi|115363749|gb|EAU62869.1| formyltetrahydrofolate deformylase [Stigmatella aurantiaca
DW4/3-1]
Length = 304
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 17/62 (27%), Gaps = 1/62 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I D GIV V L +G N+ S L L+ L
Sbjct: 25 RLLITCPDRPGIVSAVTTFLYHHGANVTELDQYSTDPSGGRFFMRLEFQTPHLDVSRATL 84
Query: 84 SV 85
Sbjct: 85 KQ 86
>gi|318040310|ref|ZP_07972266.1| homoserine dehydrogenase [Synechococcus sp. CB0101]
Length = 436
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS----VLEKLSVNV 87
D G++ +G+ G+ G++I + + + I + + L ++
Sbjct: 365 DQAGVIGRIGSCFGDQGVSIRSIVQFETSGDSNDAEIVVITHEVQEANFRRALAAITALP 424
Query: 88 TIRFV 92
++ V
Sbjct: 425 DVKAV 429
>gi|310819480|ref|YP_003951838.1| formyltetrahydrofolate deformylase [Stigmatella aurantiaca
DW4/3-1]
gi|309392552|gb|ADO70011.1| Formyltetrahydrofolate deformylase [Stigmatella aurantiaca
DW4/3-1]
Length = 303
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 17/62 (27%), Gaps = 1/62 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I D GIV V L +G N+ S L L+ L
Sbjct: 24 RLLITCPDRPGIVSAVTTFLYHHGANVTELDQYSTDPSGGRFFMRLEFQTPHLDVSRATL 83
Query: 84 SV 85
Sbjct: 84 KQ 85
>gi|311113375|ref|YP_003984597.1| homoserine dehydrogenase [Rothia dentocariosa ATCC 17931]
gi|310944869|gb|ADP41163.1| homoserine dehydrogenase [Rothia dentocariosa ATCC 17931]
Length = 427
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG++ + I E+GI++ A L + + + ++V +
Sbjct: 354 DDKLGVLANIARIFAEHGISVDSLRQST-PRDGAAQIRLVTHSAKDSDLRRAIAVIDGLD 412
Query: 91 FVKQF 95
V++
Sbjct: 413 TVREI 417
>gi|291566656|dbj|BAI88928.1| acetolactate synthase III small subunit [Arthrospira platensis
NIES-39]
Length = 184
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + + D ++ + +
Sbjct: 12 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEKSGVSRITMVVPGDDRVIEQLTK 71
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 72 QLYKLINVLKV 82
>gi|167629596|ref|YP_001680095.1| acetolactate synthase, small subunit [Heliobacterium
modesticaldum Ice1]
gi|167592336|gb|ABZ84084.1| acetolactate synthase, small subunit [Heliobacterium
modesticaldum Ice1]
Length = 160
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLE 81
+ ++ + GI+ V + G NI +G +++ + + +DG I+ V +
Sbjct: 3 HTLSVLVENKPGILTRVAGLFARRGYNIESLVVGETENPTVSRMTIVVDGDDRIIEQVTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + ++
Sbjct: 63 QLHKLIDVIKIQDIT 77
>gi|298346605|ref|YP_003719292.1| acetolactate synthase [Mobiluncus curtisii ATCC 43063]
gi|304389682|ref|ZP_07371642.1| acetolactate synthase [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315655164|ref|ZP_07908065.1| acetolactate synthase small subunit [Mobiluncus curtisii ATCC
51333]
gi|315656980|ref|ZP_07909865.1| acetolactate synthase small subunit [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298236666|gb|ADI67798.1| acetolactate synthase [Mobiluncus curtisii ATCC 43063]
gi|304327086|gb|EFL94324.1| acetolactate synthase [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315490419|gb|EFU80043.1| acetolactate synthase small subunit [Mobiluncus curtisii ATCC
51333]
gi|315492372|gb|EFU81978.1| acetolactate synthase small subunit [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 167
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID-GSIL-NSVLE 81
+ ++ + G++ V + NI +G ++ E + + ID + V +
Sbjct: 5 HTLSVLVENKPGVLARVAALFARRAFNIQSLAVGETEKPEISRITIVIDVSEVSLEQVTK 64
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 65 QLNKLVNVLKI 75
>gi|116643258|gb|ABK06437.1| flag-tagged protein kinase domain of putative mitogen-activated
protein kinase kinase kinase [synthetic construct]
Length = 581
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID---GSILNSVL 80
I D ++ + ++LGE G+NI H S + ++ +D +
Sbjct: 179 HEITFSTIDRPKLLSQLTSMLGELGLNIQEAHAF-STADGFSLDVFVVDGWSQEETEGLK 237
Query: 81 EKLSV 85
+ L
Sbjct: 238 DALKK 242
>gi|22329194|ref|NP_195303.2| protein kinase family protein [Arabidopsis thaliana]
gi|20260236|gb|AAM13016.1| putative protein [Arabidopsis thaliana]
gi|22136520|gb|AAM91338.1| putative protein [Arabidopsis thaliana]
Length = 570
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID---GSILNSVL 80
I D ++ + ++LGE G+NI H S + ++ +D +
Sbjct: 179 HEITFSTIDRPKLLSQLTSMLGELGLNIQEAHAF-STADGFSLDVFVVDGWSQEETEGLK 237
Query: 81 EKLSV 85
+ L
Sbjct: 238 DALKK 242
>gi|323304489|gb|EGA58255.1| Ser33p [Saccharomyces cerevisiae FostersB]
Length = 469
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NSVLE 81
+ ++ ++ G++ V +IL ++ NI E A I + E
Sbjct: 399 RVLYIHRNVPGVLKTVNDILSDH--NIEKQFS--DSHGEIAYLMADISSVNQSEIKDIYE 454
Query: 82 KLSVNVTIRFVKQF 95
KL+ ++
Sbjct: 455 KLNQTSAKVSIRLL 468
>gi|237752627|ref|ZP_04583107.1| guanosine-pyrophosphohydrolase [Helicobacter winghamensis ATCC
BAA-430]
gi|229376116|gb|EEO26207.1| guanosine-pyrophosphohydrolase [Helicobacter winghamensis ATCC
BAA-430]
Length = 715
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 31/85 (36%), Gaps = 6/85 (7%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
+ + + + + G++ L ++ IN+ LG +ST + + S+
Sbjct: 628 WLEDKLQIYKLIVALENQKGVLASFLTFLAKHDINVLGVELGSQKSTYATHCEVRFESSV 687
Query: 76 LNSVLEKLSVNVT----IRFVKQFE 96
+ L+ + + I V +
Sbjct: 688 SD--LKAIRSLLGSNYKIIDVYALK 710
>gi|330861478|emb|CBX71696.1| acetolactate synthase isozyme 1 small subunit [Yersinia
enterocolitica W22703]
Length = 101
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 8/69 (11%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKL 83
+ + + G++ + + N+ E + +L + D L ++ +L
Sbjct: 12 TLLLTVRNHPGVMSHICGLFARRAFNVDGILCMPLAGGEDSRIWLQVLDDQRLQQMISQL 71
Query: 84 SVNVTIRFV 92
+ V
Sbjct: 72 EKLEDVLQV 80
>gi|303327146|ref|ZP_07357588.1| ACT domain protein [Desulfovibrio sp. 3_1_syn3]
gi|302863134|gb|EFL86066.1| ACT domain protein [Desulfovibrio sp. 3_1_syn3]
Length = 143
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
+ G + V + L E GINI L + +C D +VL++
Sbjct: 11 ENRAGRLAEVTHTLAEAGINIRALSLADTSDFGILRMIVC-DHEKAKTVLKE 61
>gi|156741205|ref|YP_001431334.1| (p)ppGpp synthetase I SpoT/RelA [Roseiflexus castenholzii DSM
13941]
gi|156232533|gb|ABU57316.1| (p)ppGpp synthetase I, SpoT/RelA [Roseiflexus castenholzii DSM
13941]
Length = 771
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILN--SVLEKLS 84
I D +G+ V + + GINI + + ++ SI S+L+KL+
Sbjct: 694 IEAWDRVGLWRDVSGAIADAGINIDAVEQVPTRRPGRAVLAVTLRIQSIAQLTSILDKLN 753
Query: 85 VNVTIRFVK 93
+ +
Sbjct: 754 RLPDVIEAR 762
>gi|77918891|ref|YP_356706.1| (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate
3'-pyrophosphohydrolase [Pelobacter carbinolicus DSM
2380]
gi|77544974|gb|ABA88536.1| (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate
3'-pyrophosphohydrolase [Pelobacter carbinolicus DSM
2380]
Length = 718
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGR-SQSTEHAISFLCIDG-SILNSVLEKLSVNVT 88
D G++ V N + NI+ + R + + +D LN V+ L
Sbjct: 650 EDRKGVLANVSNAISACEANISSASVQRTKTHKSLIVFAVEVDDVEHLNRVINALHQVKG 709
Query: 89 IRFVKQFE 96
+ V +
Sbjct: 710 VYQVDRLR 717
>gi|297538292|ref|YP_003674061.1| Homoserine dehydrogenase [Methylotenera sp. 301]
gi|297257639|gb|ADI29484.1| Homoserine dehydrogenase [Methylotenera sp. 301]
Length = 437
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL----- 76
+ + +D G++ V IL + I+I L + + + I I
Sbjct: 352 SAYYLRLRASDKPGVLAGVTKILADRNISIDAM-LQKEPDDNETEADIVILTHITVEKNM 410
Query: 77 NSVLEKLSVNVTIR-FVKQFEFN 98
++ + ++ I V +
Sbjct: 411 DAGIAEIEALPAIVGKVVKLRME 433
>gi|229546415|ref|ZP_04435140.1| ACT domain protein [Enterococcus faecalis TX1322]
gi|229548529|ref|ZP_04437254.1| ACT domain protein [Enterococcus faecalis ATCC 29200]
gi|255971084|ref|ZP_05421670.1| ACT domain-containing protein [Enterococcus faecalis T1]
gi|256854543|ref|ZP_05559907.1| ACT domain-containing protein [Enterococcus faecalis T8]
gi|256957538|ref|ZP_05561709.1| ACT domain-containing protein [Enterococcus faecalis DS5]
gi|256959725|ref|ZP_05563896.1| ACT domain-containing protein [Enterococcus faecalis Merz96]
gi|256964621|ref|ZP_05568792.1| ACT domain-containing protein [Enterococcus faecalis HIP11704]
gi|257420866|ref|ZP_05597856.1| ACT domain-containing protein [Enterococcus faecalis X98]
gi|293383993|ref|ZP_06629889.1| ACT domain protein [Enterococcus faecalis R712]
gi|293386604|ref|ZP_06631182.1| ACT domain protein [Enterococcus faecalis S613]
gi|300862313|ref|ZP_07108391.1| ACT domain protein [Enterococcus faecalis TUSoD Ef11]
gi|307268403|ref|ZP_07549782.1| ACT domain protein [Enterococcus faecalis TX4248]
gi|307277383|ref|ZP_07558479.1| ACT domain protein [Enterococcus faecalis TX2134]
gi|307292356|ref|ZP_07572215.1| ACT domain protein [Enterococcus faecalis TX0411]
gi|312905847|ref|ZP_07764866.1| ACT domain protein [Enterococcus faecalis DAPTO 512]
gi|312951065|ref|ZP_07769972.1| ACT domain protein [Enterococcus faecalis TX0102]
gi|312978657|ref|ZP_07790385.1| ACT domain protein [Enterococcus faecalis DAPTO 516]
gi|229306356|gb|EEN72352.1| ACT domain protein [Enterococcus faecalis ATCC 29200]
gi|229308472|gb|EEN74459.1| ACT domain protein [Enterococcus faecalis TX1322]
gi|255962102|gb|EET94578.1| ACT domain-containing protein [Enterococcus faecalis T1]
gi|256710103|gb|EEU25147.1| ACT domain-containing protein [Enterococcus faecalis T8]
gi|256948034|gb|EEU64666.1| ACT domain-containing protein [Enterococcus faecalis DS5]
gi|256950221|gb|EEU66853.1| ACT domain-containing protein [Enterococcus faecalis Merz96]
gi|256955117|gb|EEU71749.1| ACT domain-containing protein [Enterococcus faecalis HIP11704]
gi|257162690|gb|EEU92650.1| ACT domain-containing protein [Enterococcus faecalis X98]
gi|291078673|gb|EFE16037.1| ACT domain protein [Enterococcus faecalis R712]
gi|291083937|gb|EFE20900.1| ACT domain protein [Enterococcus faecalis S613]
gi|300848249|gb|EFK76008.1| ACT domain protein [Enterococcus faecalis TUSoD Ef11]
gi|306496594|gb|EFM66152.1| ACT domain protein [Enterococcus faecalis TX0411]
gi|306505956|gb|EFM75130.1| ACT domain protein [Enterococcus faecalis TX2134]
gi|306515290|gb|EFM83826.1| ACT domain protein [Enterococcus faecalis TX4248]
gi|310628103|gb|EFQ11386.1| ACT domain protein [Enterococcus faecalis DAPTO 512]
gi|310630926|gb|EFQ14209.1| ACT domain protein [Enterococcus faecalis TX0102]
gi|311288520|gb|EFQ67076.1| ACT domain protein [Enterococcus faecalis DAPTO 516]
gi|315033356|gb|EFT45288.1| ACT domain protein [Enterococcus faecalis TX0017]
gi|315035563|gb|EFT47495.1| ACT domain protein [Enterococcus faecalis TX0027]
gi|315144283|gb|EFT88299.1| ACT domain protein [Enterococcus faecalis TX2141]
gi|315157297|gb|EFU01314.1| ACT domain protein [Enterococcus faecalis TX0043]
gi|323479769|gb|ADX79208.1| ACT domain protein [Enterococcus faecalis 62]
gi|329577213|gb|EGG58681.1| ACT domain protein [Enterococcus faecalis TX1467]
Length = 88
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE-KL 83
++ +V D +GI+ V L E INI + + L + ++ L
Sbjct: 4 ILTVVGKDKVGIIAGVSQKLAELNINILDVSQTIMEDYFTMMMMLQMQPEADLEAIKQAL 63
Query: 84 SVNVTIRFVK 93
S VK
Sbjct: 64 SQVENTLSVK 73
>gi|116073186|ref|ZP_01470448.1| acetolactate synthase III small subunit [Synechococcus sp.
RS9916]
gi|116068491|gb|EAU74243.1| acetolactate synthase III small subunit [Synechococcus sp.
RS9916]
Length = 176
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G +++ + + D L + +
Sbjct: 3 HTLSVLVEDESGALSRIAGLFARRGFNIDSLAVGPAEADGRSRLTMVVEGDEHTLQQMTK 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLDKLVNVLQV 73
>gi|321250166|ref|XP_003191712.1| d-3-phosphoglycerate dehydrogenase 2 [Cryptococcus gattii WM276]
gi|317458179|gb|ADV19925.1| d-3-phosphoglycerate dehydrogenase 2, putative [Cryptococcus gattii
WM276]
Length = 508
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 28/86 (32%), Gaps = 8/86 (9%)
Query: 10 IKIQEINFDV---DIGRL-MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ E++ R +C V+ + G++ + NIL ++ NI + A
Sbjct: 419 VNFPEVDLRAITAADERHIRVCHVHKNEPGVLKGINNILADH--NIEKQFS--DSKGDIA 474
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRF 91
I G V S R
Sbjct: 475 YLMADISGVGQEEVEGLYSAIKNTRS 500
>gi|310815658|ref|YP_003963622.1| acetolactate synthase small subunit [Ketogulonicigenium vulgare
Y25]
gi|308754393|gb|ADO42322.1| acetolactate synthase small subunit [Ketogulonicigenium vulgare
Y25]
Length = 186
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 2/74 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R + ++ + G++ V + G NI + + S + I S V
Sbjct: 24 TPERHTLTVLVENEPGVLARVVGLFSGRGYNIESLTVAEVDHFDK-RSRITIVTSGTPGV 82
Query: 80 LEKLS-VNVTIRFV 92
+E++ I V
Sbjct: 83 IEQIKLQLGRIVSV 96
>gi|88602895|ref|YP_503073.1| amino acid-binding ACT [Methanospirillum hungatei JF-1]
gi|88188357|gb|ABD41354.1| amino acid-binding ACT [Methanospirillum hungatei JF-1]
Length = 144
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 5/60 (8%)
Query: 14 EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG 73
N +I + D G + + + L E GINI + + AI L +D
Sbjct: 68 GFNVAFT---HVIAVEMKDEPGGLFEIASKLSEAGINIEYSYAF--SGKNKAILILRVDQ 122
>gi|296242950|ref|YP_003650437.1| AbrB family transcriptional regulator [Thermosphaera aggregans DSM
11486]
gi|296095534|gb|ADG91485.1| transcriptional regulator, AbrB family [Thermosphaera aggregans DSM
11486]
Length = 137
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 10/83 (12%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
I + ++ + + D G++ + L ++ I+I + E + +D +
Sbjct: 49 IPVAAKLIKIRLVV--EDRPGVLAELTRFLAQHNIDIVSTRCTVLKREELGECEMIVDLA 106
Query: 75 ILN-----SVLEKLSVNVTIRFV 92
V +++ ++ V
Sbjct: 107 KSEWTEPGMVADEMKKLEPVKNV 129
>gi|224536123|ref|ZP_03676662.1| hypothetical protein BACCELL_00988 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522257|gb|EEF91362.1| hypothetical protein BACCELL_00988 [Bacteroides cellulosilyticus
DSM 14838]
Length = 189
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + + G++ V + INI ++ S + D + V +
Sbjct: 6 YTIIVHSENFAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDTIEKVTK 65
Query: 82 KLSVNVTIRFVKQFE 96
+++ + + F
Sbjct: 66 QITKKIDVLQAHYFT 80
>gi|158522333|ref|YP_001530203.1| amino acid-binding ACT domain-containing protein [Desulfococcus
oleovorans Hxd3]
gi|158511159|gb|ABW68126.1| amino acid-binding ACT domain protein [Desulfococcus oleovorans
Hxd3]
Length = 143
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVN 86
D G + + ++LG+ G+N+ + + S +AI D + L L+ +
Sbjct: 77 EDRPGGLHRILDLLGKVGVNVEYMYAFVRNSGNNAIMIFRFDD--TDKALATLAQH 130
>gi|89100794|ref|ZP_01173647.1| GTP pyrophosphokinase [Bacillus sp. NRRL B-14911]
gi|89084497|gb|EAR63645.1| GTP pyrophosphokinase [Bacillus sp. NRRL B-14911]
Length = 731
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+E N +++I D G++ V + E NI+ ++ I+
Sbjct: 652 KEYNVEIEINGY-------DRRGLLNEVLQAVNETKTNISAVSGKSDRNKMATINMSISI 704
Query: 73 GSIL--NSVLEKLSVNVTIRFVKQF 95
++ V++++ I V++
Sbjct: 705 TNVSHLQKVVDRIKQIPDIYSVRRI 729
>gi|126462818|ref|YP_001043932.1| homoserine dehydrogenase [Rhodobacter sphaeroides ATCC 17029]
gi|126104482|gb|ABN77160.1| homoserine dehydrogenase [Rhodobacter sphaeroides ATCC 17029]
Length = 428
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
D G + + LGE GI+I + HA + + + + +S
Sbjct: 357 DKPGALAKIATALGEAGISIDRMRQYGHE-GGHAPVLIVTHKASRDDISHAIS 408
>gi|297526285|ref|YP_003668309.1| threonine dehydratase [Staphylothermus hellenicus DSM 12710]
gi|297255201|gb|ADI31410.1| threonine dehydratase [Staphylothermus hellenicus DSM 12710]
Length = 419
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 3/62 (4%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQST---EHAISFLCIDGSILNSVLEKLSVNV 87
D G + V ++L +Y +NI R A + + V L+
Sbjct: 350 WDKPGELGKVISVLAKYDLNIVDIRHDRWDPKLLPSKAKLEIVFEAKTSEDVKLALAELE 409
Query: 88 TI 89
I
Sbjct: 410 RI 411
>gi|261364744|ref|ZP_05977627.1| homoserine dehydrogenase [Neisseria mucosa ATCC 25996]
gi|288567047|gb|EFC88607.1| homoserine dehydrogenase [Neisseria mucosa ATCC 25996]
Length = 435
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 7/73 (9%), Positives = 21/73 (28%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAKENVSIEALIQKGVIDQTTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVT 88
+V ++
Sbjct: 405 EKNVKRAIAAIEA 417
>gi|6322116|ref|NP_012191.1| Ser33p [Saccharomyces cerevisiae S288c]
gi|731830|sp|P40510|SER33_YEAST RecName: Full=D-3-phosphoglycerate dehydrogenase 2; Short=3-PGDH 2
gi|556873|emb|CAA86096.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285812577|tpg|DAA08476.1| TPA: Ser33p [Saccharomyces cerevisiae S288c]
Length = 469
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NSVLE 81
+ ++ ++ G++ V +IL ++ NI E A I + E
Sbjct: 399 RVLYIHRNVPGVLKTVNDILSDH--NIEKQFS--DSHGEIAYLMADISSVNQSEIKDIYE 454
Query: 82 KLSVNVTIRFVKQF 95
KL+ ++
Sbjct: 455 KLNQTSAKVSIRLL 468
>gi|146420175|ref|XP_001486045.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 464
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI---SFLCIDGSILNSVLE 81
+ ++ ++ G++ V NIL + NI + A +D + + S+ E
Sbjct: 394 RVLYIHQNVPGVLKTVNNILSNH--NIEKQFS--DSRGDVAYLMADISDVDLADIKSLYE 449
Query: 82 KLSVNVTIRFVKQF 95
+L +
Sbjct: 450 QLEQTPYKIATRLL 463
>gi|284050802|ref|ZP_06381012.1| acetolactate synthase 3 regulatory subunit [Arthrospira platensis
str. Paraca]
Length = 175
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + + D ++ + +
Sbjct: 3 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEKSGVSRITMVVPGDDRVIEQLTK 62
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 63 QLYKLINVLKV 73
>gi|189463898|ref|ZP_03012683.1| hypothetical protein BACINT_00232 [Bacteroides intestinalis DSM
17393]
gi|189438471|gb|EDV07456.1| hypothetical protein BACINT_00232 [Bacteroides intestinalis DSM
17393]
Length = 189
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
I + + + G++ V + INI ++ S + D + V +
Sbjct: 6 YTIIVHSENFAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDTIEKVTK 65
Query: 82 KLSVNVTIRFVKQFE 96
+++ + + F
Sbjct: 66 QITKKIDVLQAHYFT 80
>gi|163793040|ref|ZP_02187016.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase [alpha
proteobacterium BAL199]
gi|159181686|gb|EDP66198.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase [alpha
proteobacterium BAL199]
Length = 713
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 27/73 (36%), Gaps = 8/73 (10%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SV 79
+ +V A+ G + + ++G+ NI + + + ID + + ++
Sbjct: 639 RLDVVIANEPGSLGSLSTVIGKNSGNIINLKIVTRSVD---FFEILIDVEVGDVRHLTTI 695
Query: 80 LEKLSVNVTIRFV 92
+ L I V
Sbjct: 696 IAALRATPVINSV 708
>gi|330831043|ref|YP_004393995.1| glycine cleavage system transcriptional repressor [Aeromonas
veronii B565]
gi|328806179|gb|AEB51378.1| Glycine cleavage system transcriptional repressor [Aeromonas
veronii B565]
Length = 177
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 13/38 (34%), Gaps = 3/38 (7%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFH 55
DV ++ D GIV E+G NI
Sbjct: 89 DVRASADLLI---RDEPGIVSQCTQFFSEHGWNIQAMQ 123
>gi|258651691|ref|YP_003200847.1| amino acid-binding ACT domain-containing protein [Nakamurella
multipartita DSM 44233]
gi|258554916|gb|ACV77858.1| amino acid-binding ACT domain protein [Nakamurella multipartita
DSM 44233]
Length = 228
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLSVNVT 88
D G + V LGE G +I + + A+ + + G +S++
Sbjct: 11 DRPGTLGAVATALGEVGADILAMDVVERSP-DLAVDDIVVALPSGRQPDSLITAAEGVEG 69
Query: 89 IR--FVKQ 94
+ V+
Sbjct: 70 VHVESVRP 77
>gi|253580008|ref|ZP_04857275.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848527|gb|EES76490.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 151
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 5/82 (6%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID----G 73
+ + I D G++ V + + NI H A L +D
Sbjct: 68 ETRGKTITFIIQMDDEPGLLSVVLQTIARFHGNILTIHQSI-PINGIATLTLSVDILPGE 126
Query: 74 SILNSVLEKLSVNVTIRFVKQF 95
+++E + N I ++K
Sbjct: 127 GDAEAMVETIEQNEGIHYLKIL 148
>gi|163854262|ref|YP_001642305.1| acetolactate synthase, small subunit [Methylobacterium extorquens
PA1]
gi|218533223|ref|YP_002424039.1| acetolactate synthase, small subunit [Methylobacterium
chloromethanicum CM4]
gi|240141721|ref|YP_002966201.1| acetolactate synthase III, small subunit [Methylobacterium
extorquens AM1]
gi|254564231|ref|YP_003071326.1| acetolactate synthase III, small subunit [Methylobacterium
extorquens DM4]
gi|163665867|gb|ABY33234.1| acetolactate synthase, small subunit [Methylobacterium extorquens
PA1]
gi|218525526|gb|ACK86111.1| acetolactate synthase, small subunit [Methylobacterium
chloromethanicum CM4]
gi|240011698|gb|ACS42924.1| acetolactate synthase III, small subunit [Methylobacterium
extorquens AM1]
gi|254271509|emb|CAX27524.1| acetolactate synthase III, small subunit [Methylobacterium
extorquens DM4]
Length = 180
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ R + +V + G + + + G NI + ++ H +S + I + N+V
Sbjct: 16 SVNRHTLAVVVDNEPGALARIAGLFSGRGYNIESLTVSETEEARH-LSRITIVTTGTNAV 74
Query: 80 LEKLSV 85
++++
Sbjct: 75 IDQIKA 80
>gi|227499575|ref|ZP_03929682.1| GTP diphosphokinase [Anaerococcus tetradius ATCC 35098]
gi|227218334|gb|EEI83588.1| GTP diphosphokinase [Anaerococcus tetradius ATCC 35098]
Length = 726
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID--GSILNSV--LEKLSVNV 87
+ I+ + ++ INI + Q L ++ + + + L+ L
Sbjct: 660 NAPSILYDITKMMSTVNINILAINARTDQDEGIIDLILEVNNMDQLSDLITKLKALKTVD 719
Query: 88 TIRFVK 93
+ VK
Sbjct: 720 NVYRVK 725
>gi|253700657|ref|YP_003021846.1| amino acid-binding ACT domain protein [Geobacter sp. M21]
gi|251775507|gb|ACT18088.1| amino acid-binding ACT domain protein [Geobacter sp. M21]
Length = 143
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
I I + G + V ILG+ G+NI L + + D SVL+
Sbjct: 6 ISIFIENKFGRLAEVTRILGDAGVNIRTLSLADTSDFGILRLIVN-DAEKAKSVLK 60
>gi|84516378|ref|ZP_01003738.1| acetolactate synthase small subunit [Loktanella vestfoldensis
SKA53]
gi|84510074|gb|EAQ06531.1| acetolactate synthase small subunit [Loktanella vestfoldensis
SKA53]
Length = 187
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 23/75 (30%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + ++ + G++ V + G NI + H + +++
Sbjct: 27 ERHTLAVLVENEPGVLARVIGLFAGRGYNIESLTVAEVDHQGHRSRITIVTTGTPQIIIQ 86
Query: 82 KLSVNVTIRFVKQFE 96
+ I V +
Sbjct: 87 IKAQLGRIIDVHKVN 101
>gi|313672627|ref|YP_004050738.1| (p)ppgpp synthetase i, spot/rela [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939383|gb|ADR18575.1| (p)ppGpp synthetase I, SpoT/RelA [Calditerrivibrio nitroreducens
DSM 19672]
Length = 710
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 8/88 (9%)
Query: 5 GKPRFIKIQ---EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+ R I + N + + I D GI+ + +L + INI +
Sbjct: 619 NEDRIIDVNWAEGKNIKLPFKITTVTI---DKPGILSDITTLLKDMAINIIELSAKPQKD 675
Query: 62 TE-HAISFLCIDGSIL-NSVLEKLSVNV 87
+ + G + VL+KL
Sbjct: 676 GNARQTFTIELSGKSQLDKVLQKLQSLP 703
>gi|311067811|ref|YP_003972734.1| formyltetrahydrofolate deformylase [Bacillus atrophaeus 1942]
gi|310868328|gb|ADP31803.1| formyltetrahydrofolate deformylase [Bacillus atrophaeus 1942]
Length = 300
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGIN-IAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D GIV V L E+G N I + D + E+L
Sbjct: 21 RLLVSCPDQPGIVAAVSAFLFEHGANIIESNQYTTDPEGGRFFLRIEFDCDGIREKKEQL 80
Query: 84 SV 85
Sbjct: 81 KQ 82
>gi|294101909|ref|YP_003553767.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Aminobacterium colombiense DSM 12261]
gi|293616889|gb|ADE57043.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Aminobacterium colombiense DSM 12261]
Length = 516
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 26/91 (28%), Gaps = 4/91 (4%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
G KI + + IV + G + I E+ N + +
Sbjct: 130 GGGAIVITKIDGWPVWITGDSHDLFIV-TNSEGKDSLLLKI-EEHNRN--ERSVTIHERD 185
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVTIRFVK 93
+ + + +L+ L + +K
Sbjct: 186 GQFLIHIAYLRRPVKEILKNLESMTGVLSLK 216
>gi|212634490|ref|YP_002311015.1| transcriptional regulator TyrR [Shewanella piezotolerans WP3]
gi|212555974|gb|ACJ28428.1| Transcriptional regulatory protein TyrR [Shewanella piezotolerans
WP3]
Length = 514
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D +G+ + I+ +YGIN+ + F + L+ +L + +
Sbjct: 9 DRVGLAKDILLIMEDYGINLFAIDASNQ--GFLYLQFAEVSFDTLSELLPLIRKVEGVHD 66
Query: 92 VKQFEF 97
V+ F
Sbjct: 67 VRTVSF 72
>gi|119773405|ref|YP_926145.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella
amazonensis SB2B]
gi|119765905|gb|ABL98475.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella amazonensis SB2B]
Length = 699
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 31/85 (36%), Gaps = 11/85 (12%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-- 68
K+ + + + + + + G + + +I+ G NI + L +
Sbjct: 617 KVDGVEYQAN-----LRVEIVNHQGALAKITSIIASEGSNIHN--LSTEERDGRVYLINL 669
Query: 69 -LCI-DGSILNSVLEKLSVNVTIRF 91
+ + D L +V+ ++ V +
Sbjct: 670 RISVRDRIHLANVMRRIRVLPEVLR 694
>gi|284048270|ref|YP_003398609.1| amino acid-binding ACT domain protein [Acidaminococcus fermentans
DSM 20731]
gi|283952491|gb|ADB47294.1| amino acid-binding ACT domain protein [Acidaminococcus fermentans
DSM 20731]
Length = 137
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 18/60 (30%), Gaps = 4/60 (6%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
I + A+ G + + N L INI S + + LE L
Sbjct: 5 ISLFAANHKGALGKITNDLARENINIYTMLATDSAEFGIIRLIVD----NPDKALEALQK 60
>gi|251798381|ref|YP_003013112.1| prephenate dehydratase [Paenibacillus sp. JDR-2]
gi|247546007|gb|ACT03026.1| Prephenate dehydratase [Paenibacillus sp. JDR-2]
Length = 290
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLG-RSQSTEHAISFLCIDGSILNSVL-EK 82
++ + D G + V IN++ + + ++ ID ++ +L
Sbjct: 205 ILITLPEDYPGALHQVLAAFAWRKINLSKIESRPTKKKLGNYYFYIDIDMALDTVLLPSA 264
Query: 83 LSVNVTI-RFVKQF 95
L I V+
Sbjct: 265 LEEIEAIGCQVRIL 278
>gi|226311444|ref|YP_002771338.1| prephenate dehydratase [Brevibacillus brevis NBRC 100599]
gi|226094392|dbj|BAH42834.1| prephenate dehydratase [Brevibacillus brevis NBRC 100599]
Length = 287
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 37/103 (35%), Gaps = 11/103 (10%)
Query: 2 FSDGKPRFIKIQEINFDVDIGR----LMICIVNADILGIVVFVGNILGEYGINIAHFHLG 57
+S+ RF+ + + D+ + R ++ + D G + V +N++
Sbjct: 175 YSNNYTRFVLVGRESLDLPVSRKEKTTILVTLPEDFPGALYQVLAAFAWRKVNLSRIESR 234
Query: 58 -RSQSTEHAISFLCIDGSILNSVL----EKLSVNVTIRFVKQF 95
++ + I+ + + +L ++ V+Q
Sbjct: 235 PTKKALGSYYFVIDIEQKMDDVLLPGAFAEIEAIG--CQVRQL 275
>gi|50954753|ref|YP_062041.1| GTP pyrophosphokinase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50951235|gb|AAT88936.1| GTP pyrophosphokinase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 758
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
Query: 15 INFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQST-EHAISF 68
I + + +V D G++ V +L E +NI + S +
Sbjct: 668 IEVEWAPSSKSVFLVQIQVEALDRSGLLSDVTRVLSENHVNILSATVTTSSDRLALSRFV 727
Query: 69 LCI-DGSILNSVLEKLSVNVTIRFV 92
+ D + L+ VL + T+ V
Sbjct: 728 FEMGDTTHLDRVLNAVRRIDTVYDV 752
>gi|294787688|ref|ZP_06752932.1| homoserine dehydrogenase [Simonsiella muelleri ATCC 29453]
gi|294483981|gb|EFG31664.1| homoserine dehydrogenase [Simonsiella muelleri ATCC 29453]
Length = 435
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 10/81 (12%), Positives = 26/81 (32%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
++ D + + D G++ + +L G++I A +
Sbjct: 342 NFVSMDEISSSYYLRVRADDQAGVLGTIATLLAREGVSIEALIQKAVLDNHQAEIVILTH 401
Query: 73 GSILNSVLEKLSVNVTIRFVK 93
+I +V + + V+
Sbjct: 402 HTIEKNVKNAIEAIESQECVR 422
>gi|224080668|ref|XP_002306203.1| predicted protein [Populus trichocarpa]
gi|222849167|gb|EEE86714.1| predicted protein [Populus trichocarpa]
Length = 494
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ I D ++ + +++ + G+NI H S +++ +DG
Sbjct: 98 FEGYMHEITFSTDDKPKLLSQLTSLVADIGLNIQEAHAF-STVDGYSLDVFVVDGWPYEE 156
Query: 79 VLEKLSV 85
E+L
Sbjct: 157 T-EQLRD 162
>gi|78189731|ref|YP_380069.1| metal dependent phosphohydrolase [Chlorobium chlorochromatii CaD3]
gi|78171930|gb|ABB29026.1| metal dependent phosphohydrolase [Chlorobium chlorochromatii CaD3]
Length = 735
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKLSVN 86
I+ D +GI+ + ++ + +NI L + I + + + L+S++EKL
Sbjct: 665 IIGEDRVGIMNQITTVISKLDVNIRTISLNANDGMFVGIMTIFVRNADKLSSLMEKLKKV 724
Query: 87 VTIRFVKQF 95
+ V++
Sbjct: 725 QGVFTVERL 733
>gi|254414972|ref|ZP_05028735.1| acetolactate synthase, small subunit [Microcoleus chthonoplastes
PCC 7420]
gi|196178119|gb|EDX73120.1| acetolactate synthase, small subunit [Microcoleus chthonoplastes
PCC 7420]
Length = 172
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + D + + +
Sbjct: 3 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEKVGISRITMVVPGDERSIEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V++
Sbjct: 63 QLYKLINVIKVQEIT 77
>gi|145361625|ref|NP_850173.2| acetolactate synthase small subunit, putative [Arabidopsis
thaliana]
gi|330253493|gb|AEC08587.1| ACT domain-containing small subunit of acetolactate synthase
protein [Arabidopsis thaliana]
Length = 421
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFLCI---DGSILNSV 79
+ ++ DI G++ V + G NI A+ +G +++ + I D S+ +
Sbjct: 249 HTLSLLVNDIPGVLNIVTGVFARRGYNIQAYLAVGHAETKGISRITTVIPATDESVSK-L 307
Query: 80 LEKLSVNVTIRFVKQFE 96
+++L V + V
Sbjct: 308 VQQLYKLVDVHEVHDLT 324
>gi|68466478|ref|XP_722721.1| likely valine-responsive mitochondrial acetolacetate synthase
regulatory subunit [Candida albicans SC5314]
gi|46444712|gb|EAL03985.1| likely valine-responsive mitochondrial acetolacetate synthase
regulatory subunit [Candida albicans SC5314]
Length = 303
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
+ ++ + + G++ V L G NI + ++ + + + + ++
Sbjct: 71 APPKQHVLNCLVQNEPGVLSGVSGTLAARGFNIDSLVVWNTEVKDLSRMTIVLKGQDGVV 130
Query: 77 NSVLEKLSVNVTIRFV 92
++ V + V
Sbjct: 131 EQARRQIEDLVPVYAV 146
>gi|329765417|ref|ZP_08256997.1| acetolactate synthase, small subunit [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329138323|gb|EGG42579.1| acetolactate synthase, small subunit [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 160
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEK 82
++ ++ + GI+ V ++ NI +G +++ E++ + D + ++++
Sbjct: 4 ILTLLVENKPGILFKVTHLFRSRNFNIDSISVGVTENPEYSRMTITTYGDEKQVEQIVKQ 63
Query: 83 LSVNVTIRFVKQF 95
L + VK
Sbjct: 64 LDKMIDTIEVKHL 76
>gi|222086369|ref|YP_002544903.1| acetolactate synthase, small subunit [Agrobacterium radiobacter
K84]
gi|221723817|gb|ACM26973.1| acetolactate synthase, small subunit [Agrobacterium radiobacter
K84]
Length = 190
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ ++ + G++ V + G NI + + +S + +
Sbjct: 19 AAAESHTLSVLVDNEPGVLARVIGLFSGRGYNIESLTVS-ETEHQAHLSRITVVTRGTPQ 77
Query: 79 VLEKLSV-NVTIRFV-KQFEFNV 99
VLE++ I V + + V
Sbjct: 78 VLEQIKAQLERIVPVHRVVDLTV 100
>gi|323497037|ref|ZP_08102060.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Vibrio
sinaloensis DSM 21326]
gi|323317881|gb|EGA70869.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Vibrio
sinaloensis DSM 21326]
Length = 706
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 6/67 (8%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI----DGSILNSVLEKLSVN 86
+ G + + N++ + G NI L + + + D L ++ K+
Sbjct: 638 QNRQGALAELTNVISKTGSNIHG--LSTEERDGRLYTVTVLLTTKDRVHLAGIMRKIKAM 695
Query: 87 VTIRFVK 93
V+
Sbjct: 696 PQTLKVR 702
>gi|326791681|ref|YP_004309502.1| prephenate dehydrogenase [Clostridium lentocellum DSM 5427]
gi|326542445|gb|ADZ84304.1| Prephenate dehydrogenase [Clostridium lentocellum DSM 5427]
Length = 366
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHL 56
+ I D GI+ + L ++ INI + +
Sbjct: 297 YALHIDAKDEPGIIAKIATSLSDHHINIKNLSV 329
>gi|296270031|ref|YP_003652663.1| (p)ppGpp synthetase I [Thermobispora bispora DSM 43833]
gi|296092818|gb|ADG88770.1| (p)ppGpp synthetase I, SpoT/RelA [Thermobispora bispora DSM 43833]
Length = 786
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 10/81 (12%), Positives = 22/81 (27%), Gaps = 8/81 (9%)
Query: 19 VDIGRLMICIVNA----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
+ + D ++ V L + +NI + + A+S +
Sbjct: 702 APGEDTVFLVAIQVEALDRPRLLSDVTRTLSDQHVNILSATV-TTSRDRVAVSRFTFEMG 760
Query: 75 ILN---SVLEKLSVNVTIRFV 92
VL + + V
Sbjct: 761 DPKHLGHVLRAVRNVPGVYDV 781
>gi|295399422|ref|ZP_06809404.1| acetolactate synthase, small subunit [Geobacillus
thermoglucosidasius C56-YS93]
gi|312110019|ref|YP_003988335.1| acetolactate synthase, small subunit [Geobacillus sp. Y4.1MC1]
gi|294978888|gb|EFG54484.1| acetolactate synthase, small subunit [Geobacillus
thermoglucosidasius C56-YS93]
gi|311215120|gb|ADP73724.1| acetolactate synthase, small subunit [Geobacillus sp. Y4.1MC1]
Length = 172
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
+I + + G++ + + + NI +G ++ + + D +++
Sbjct: 4 IITMTVNNRPGVLNRITGLFTKRHYNIESITVGHTEVEGISRMTFVVNVEDERTAEQIIK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V
Sbjct: 64 QLNKQIDVLKVNDIT 78
>gi|239832264|ref|ZP_04680593.1| acetolactate synthase, small subunit [Ochrobactrum intermedium
LMG 3301]
gi|239824531|gb|EEQ96099.1| acetolactate synthase, small subunit [Ochrobactrum intermedium
LMG 3301]
Length = 190
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ ++ + G++ V + G NI + ++ +H +S + I VL
Sbjct: 21 PETHTLAVLVDNEPGVLARVIGLFSGRGYNIESLTVSETEHEKH-LSRITIVTRGTPHVL 79
Query: 81 EKLS 84
+++
Sbjct: 80 DQIR 83
>gi|110638104|ref|YP_678313.1| GTP diphosphokinase [Cytophaga hutchinsonii ATCC 33406]
gi|110280785|gb|ABG58971.1| GTP diphosphokinase (guanosine 3',5'-polyphosphate synthase)
[Cytophaga hutchinsonii ATCC 33406]
Length = 732
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 26 ICIVNADILGIVVFVGNILG-EYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKL 83
+ IV AD +GI+ V ++ + +NI + + + D LN+++ KL
Sbjct: 659 LKIVGADRVGIINDVTKVISTQLKVNIRSITIDTDDGIFEGTMMVFVNDTEHLNTLISKL 718
Query: 84 SVNVTIRFVKQFE 96
I V +
Sbjct: 719 KEISDIISVSRIN 731
>gi|318040074|ref|ZP_07972030.1| acetolactate synthase 3 regulatory subunit [Synechococcus sp.
CB0101]
Length = 176
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + D L+ + +
Sbjct: 3 HTLSVLVEDESGVLSRISGLFARRGFNIESLAVGPAERSGVSRLTMVVEGDERTLSQMSK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V
Sbjct: 63 QLNKLINVLEVNDLT 77
>gi|288940536|ref|YP_003442776.1| amino acid-binding ACT domain-containing protein [Allochromatium
vinosum DSM 180]
gi|288895908|gb|ADC61744.1| amino acid-binding ACT domain protein [Allochromatium vinosum DSM
180]
Length = 177
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
++ +V AD GIV V +L E G N+ + R I + D +L+ L
Sbjct: 9 NLLTLVGADRPGIVSRVTRVLYECGCNLGEASMIRLG-GNFTIMLMVSDARPETEILDAL 67
Query: 84 S 84
+
Sbjct: 68 A 68
>gi|238881688|gb|EEQ45326.1| acetolactate synthase small subunit, mitochondrial precursor
[Candida albicans WO-1]
Length = 303
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
+ ++ + + G++ V L G NI + ++ + + + + ++
Sbjct: 71 APPKQHVLNCLVQNEPGVLSGVSGTLAARGFNIDSLVVCNTEVKDLSRMTIVLKGQDGVV 130
Query: 77 NSVLEKLSVNVTIRFV 92
++ V + V
Sbjct: 131 EQARRQIEDLVPVYAV 146
>gi|254486138|ref|ZP_05099343.1| acetolactate synthase, small subunit [Roseobacter sp. GAI101]
gi|214043007|gb|EEB83645.1| acetolactate synthase, small subunit [Roseobacter sp. GAI101]
Length = 200
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + ++ + G++ V + G NI + T H +S + I S V+E
Sbjct: 41 ERHTLAVLVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGH-LSRITIVTSGTPQVIE 99
Query: 82 KLSV 85
++
Sbjct: 100 QIKA 103
>gi|209525678|ref|ZP_03274215.1| acetolactate synthase, small subunit [Arthrospira maxima CS-328]
gi|209493847|gb|EDZ94165.1| acetolactate synthase, small subunit [Arthrospira maxima CS-328]
Length = 175
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + + D I+ + +
Sbjct: 3 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEKSGVSRITMVVPGDDRIIEQLTK 62
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 63 QLYKLINVLKV 73
>gi|158423624|ref|YP_001524916.1| RelA/SpoT protein [Azorhizobium caulinodans ORS 571]
gi|158330513|dbj|BAF87998.1| RelA/SpoT protein [Azorhizobium caulinodans ORS 571]
Length = 746
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
I + + G + V I+GE NI + RS+S + + +D
Sbjct: 672 RIRVTAINEPGTLGQVATIIGERNGNIEGLEM-RSRSPDFTEMLIDLD 718
>gi|68466183|ref|XP_722866.1| likely valine-responsive mitochondrial acetolacetate synthase
regulatory subunit [Candida albicans SC5314]
gi|46444867|gb|EAL04139.1| likely valine-responsive mitochondrial acetolacetate synthase
regulatory subunit [Candida albicans SC5314]
Length = 302
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
+ ++ + + G++ V L G NI + ++ + + + + ++
Sbjct: 70 APPKQHVLNCLVQNEPGVLSGVSGTLAARGFNIDSLVVCNTEVKDLSRMTIVLKGQDGVV 129
Query: 77 NSVLEKLSVNVTIRFV 92
++ V + V
Sbjct: 130 EQARRQIEDLVPVYAV 145
>gi|325282611|ref|YP_004255152.1| acetolactate synthase, small subunit [Deinococcus proteolyticus
MRP]
gi|324314420|gb|ADY25535.1| acetolactate synthase, small subunit [Deinococcus proteolyticus
MRP]
Length = 200
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 9/73 (12%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSV 79
G ++ + D ++ + + G G NI +G +++ + + G ++
Sbjct: 3 GEHLVSALVRDEPRVLTRITALFGRRGYNIKSLSVGATETPGVSRMTFVVGGERGVVEQA 62
Query: 80 LEKLSVNVTIRFV 92
+ +L + +
Sbjct: 63 MRQLEKLHDVLQI 75
>gi|257455106|ref|ZP_05620344.1| protein-P-II uridylyltransferase [Enhydrobacter aerosaccus SK60]
gi|257447439|gb|EEV22444.1| protein-P-II uridylyltransferase [Enhydrobacter aerosaccus SK60]
Length = 892
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CID 72
NF+ + M+ + D ++ VG + + I + + + F+ D
Sbjct: 811 FNFNPQSNQHMMILETLDQPALLARVGQVFLAHDIEVHFARITTLGERAEDMFFITDHED 870
Query: 73 GSILNSVLEKLSV 85
+ + LEKL
Sbjct: 871 KPLSDERLEKLKQ 883
>gi|157736428|ref|YP_001489111.1| homoserine dehydrogenase [Arcobacter butzleri RM4018]
gi|315635561|ref|ZP_07890827.1| homoserine dehydrogenase [Arcobacter butzleri JV22]
gi|157698282|gb|ABV66442.1| homoserine dehydrogenase [Arcobacter butzleri RM4018]
gi|315480319|gb|EFU70986.1| homoserine dehydrogenase [Arcobacter butzleri JV22]
Length = 420
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
D G + V I G I+I + + + A L + +L+ +
Sbjct: 350 DKSGTLAKVATIFGNNSISIENM-MQKPLKDSKANLLLTTHTCVEKDILKAIKELEN 405
>gi|220931623|ref|YP_002508531.1| MgtC/SapB transporter [Halothermothrix orenii H 168]
gi|219992933|gb|ACL69536.1| MgtC/SapB transporter [Halothermothrix orenii H 168]
Length = 221
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH--AISFLCIDGSILNSVL-E 81
++ D G++ +G LG INI + ++ ++ + + I + S++ +
Sbjct: 146 ILKCRVMDKPGLLGEIGVTLGSKEINITNVNIEKNSNEGEMDVELIVKIPRNFDKSIINQ 205
Query: 82 KLSVNVTIR 90
+L IR
Sbjct: 206 ELLKIEGIR 214
>gi|86136670|ref|ZP_01055249.1| acetolactate synthase small subunit [Roseobacter sp. MED193]
gi|85827544|gb|EAQ47740.1| acetolactate synthase small subunit [Roseobacter sp. MED193]
Length = 186
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + ++ + G++ V + G NI + T H +S + + + V+E
Sbjct: 27 ERHTLAVLVENEPGVLARVIGLFAGRGYNIESLTVAEVDHTGH-LSRITVVTTGTPQVIE 85
Query: 82 KLSV-NVTIRFV 92
++ I V
Sbjct: 86 QIKAQLGRIVSV 97
>gi|303327731|ref|ZP_07358171.1| acetolactate synthase, small subunit [Desulfovibrio sp. 3_1_syn3]
gi|302862092|gb|EFL85026.1| acetolactate synthase, small subunit [Desulfovibrio sp. 3_1_syn3]
Length = 162
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNS 78
+ R ++ ++ + G++ V + G NI ++ + + + D IL
Sbjct: 1 MQRHVLSVLVENEPGVLSRVVGLFSGRGFNIDSLNVAPALEEGVSHMTITTYGDSMILEQ 60
Query: 79 VLEKLSVNVTIRFV 92
++++L V++ V
Sbjct: 61 IMKQLHKIVSVIKV 74
>gi|288904523|ref|YP_003429744.1| acetolactate synthase (small subunit) [Streptococcus gallolyticus
UCN34]
gi|306830517|ref|ZP_07463685.1| acetolactate synthase small subunit [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|325977494|ref|YP_004287210.1| acetolactate synthase 3 regulatory subunit [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|288731248|emb|CBI12798.1| acetolactate synthase (small subunit) [Streptococcus gallolyticus
UCN34]
gi|304427311|gb|EFM30415.1| acetolactate synthase small subunit [Streptococcus gallolyticus
subsp. gallolyticus TX20005]
gi|325177422|emb|CBZ47466.1| acetolactate synthase 3 regulatory subunit [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
Length = 160
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LE 81
M+ + G++ +L +NI +G + + + ID L V ++
Sbjct: 4 MLTAKLQNSTGVLNRFTGVLSRRQVNIESISVGHTMEPNISRITIIIDVESLEEVEQIIK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V+
Sbjct: 64 QLNRLIDVLRVRDIT 78
>gi|260462329|ref|ZP_05810537.1| (p)ppGpp synthetase I, SpoT/RelA [Mesorhizobium opportunistum
WSM2075]
gi|259031823|gb|EEW33091.1| (p)ppGpp synthetase I, SpoT/RelA [Mesorhizobium opportunistum
WSM2075]
Length = 742
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
+ + + G + + ++ NI + R+ + + + D LN +L
Sbjct: 668 RVSVTAINAPGSLADIAQVVASNDANIHTLSMVRTAP-DFTEMLIDLEVWDLKHLNRLLS 726
Query: 82 KLSVNVTIRFVKQFE 96
+L N ++ ++
Sbjct: 727 QLKDNSSVSDARRVN 741
>gi|302753708|ref|XP_002960278.1| hypothetical protein SELMODRAFT_402428 [Selaginella moellendorffii]
gi|300171217|gb|EFJ37817.1| hypothetical protein SELMODRAFT_402428 [Selaginella moellendorffii]
Length = 430
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
++ D GI+ G +L +N++ +G + + A+ + +D
Sbjct: 343 PHLL---QVDQPGIIGKAGGLLS---VNVSFMSVGMTSPRKQAVRAIGVDEE 388
>gi|223934804|ref|ZP_03626723.1| Homoserine dehydrogenase [bacterium Ellin514]
gi|223896257|gb|EEF62699.1| Homoserine dehydrogenase [bacterium Ellin514]
Length = 463
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 22/64 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G + + ILGE I I+ L I + ++V + L +
Sbjct: 389 IDKPGTLARITAILGEANIGISSVIQPEGHEGSSVPLILMIHDATNSNVTKALGKIAKLS 448
Query: 91 FVKQ 94
VK
Sbjct: 449 AVKA 452
>gi|19918933|gb|AAL99357.1| acetohydroxy acid synthase small subunit [Geobacillus
stearothermophilus]
Length = 169
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
MI + + G++ + + + NI +G ++ + + D +++
Sbjct: 1 MITMTVNNRPGVLNRITGLFTKRHYNIESITVGHTEIDGVSRMTFVVNVDDERTAEQIIK 60
Query: 82 KLSVNVTIRFVKQFE 96
L+ + + V
Sbjct: 61 LLNKQIDVLKVNDIT 75
>gi|325962914|ref|YP_004240820.1| prephenate dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
gi|323469001|gb|ADX72686.1| prephenate dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
Length = 369
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 26/60 (43%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ ++ D G + + +GE G+N+ L S + + + + + ++E L+
Sbjct: 303 LTVLVDDKPGQIARLLTEIGEIGVNLEDLRLDHSSGQNVGMVEISVLPNKHDHLIEALND 362
>gi|315655909|ref|ZP_07908807.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii ATCC 51333]
gi|315489973|gb|EFU79600.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii ATCC 51333]
Length = 212
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 7/87 (8%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
FI I + I D G++ + + GE NI H + R E +
Sbjct: 130 FIDING----AREPGTRLVIEADDQPGVMSRLARVTGELETNITHIAVYR-TGMESSFVL 184
Query: 69 LCIDGSILNSVLEKLSVNVTIRFVKQF 95
L ++ + + + V+
Sbjct: 185 LGVNTVNTADLEDAFTKAG--FRVRYV 209
>gi|315651527|ref|ZP_07904547.1| acetolactate synthase small subunit [Eubacterium saburreum DSM
3986]
gi|315486182|gb|EFU76544.1| acetolactate synthase small subunit [Eubacterium saburreum DSM
3986]
Length = 165
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA-ISFLCI-DGSILNSVLEKLSVNVT 88
+ G++ V + G NI +G + + ++ + I D L+ ++++L
Sbjct: 10 DNSSGVLSRVAGLFSRRGYNIDSLTVGETADPRFSRMTVVSIGDEDTLDQIVKQLRKLED 69
Query: 89 IRFVKQFE 96
+R +K E
Sbjct: 70 VRDIKVLE 77
>gi|295091359|emb|CBK77466.1| acetolactate synthase, small subunit [Clostridium cf.
saccharolyticum K10]
gi|295116254|emb|CBL37101.1| Acetolactate synthase, small (regulatory) subunit
[butyrate-producing bacterium SM4/1]
Length = 166
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVNVT 88
+ G++ V + G NI +G + +++ + D IL + ++L
Sbjct: 11 DNTAGVLSRVAGLFSRRGYNIESLTVGETADPKYSRMTVVSQGDQEILEQIEKQLRKLED 70
Query: 89 IRFVKQFE 96
+ +K+
Sbjct: 71 VYDIKELR 78
>gi|262280672|ref|ZP_06058455.1| homoserine dehydrogenase [Acinetobacter calcoaceticus RUH2202]
gi|262257572|gb|EEY76307.1| homoserine dehydrogenase [Acinetobacter calcoaceticus RUH2202]
Length = 437
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
I + D G++ V IL GI+I I L I S ++ L
Sbjct: 355 GYYIRLNAEDQTGVLADVTTILSRAGISIDAIMQQSRLKDLIPIVILTDPIVESKMDEAL 414
Query: 81 EKLSVNVTIR 90
++ IR
Sbjct: 415 AQIQALPAIR 424
>gi|283795687|ref|ZP_06344840.1| acetolactate synthase, small subunit [Clostridium sp. M62/1]
gi|291077360|gb|EFE14724.1| acetolactate synthase, small subunit [Clostridium sp. M62/1]
Length = 166
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVNVT 88
+ G++ V + G NI +G + +++ + D IL + ++L
Sbjct: 11 DNTAGVLSRVAGLFSRRGYNIESLTVGETADPKYSRMTVVSQGDQEILEQIEKQLRKLED 70
Query: 89 IRFVKQFE 96
+ +K+
Sbjct: 71 VYDIKELR 78
>gi|154151513|ref|YP_001405131.1| amino acid-binding ACT domain-containing protein [Candidatus
Methanoregula boonei 6A8]
gi|154000065|gb|ABS56488.1| amino acid-binding ACT domain protein [Methanoregula boonei 6A8]
Length = 225
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA-ISFLCIDGSI 75
D R + I+ + G++ + ++ +G NI + S +A + L ++
Sbjct: 1 MDAQPERCAMRIIAENTSGVLRDIATVIAGHGANILMINQEIFDSGPYAGLGELYLEYEP 60
Query: 76 LNSVLEKLSVNVTIRFVKQFE 96
+ + I+ V+ +
Sbjct: 61 GPDREKLVRDLEAIKSVRDVK 81
>gi|157961276|ref|YP_001501310.1| transcriptional regulator TyrR [Shewanella pealeana ATCC 700345]
gi|157846276|gb|ABV86775.1| transcriptional regulator, TyrR [Shewanella pealeana ATCC 700345]
Length = 513
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D +G+ + I+ +YGIN+ + F + L+ +L + +
Sbjct: 9 DRVGLAKDILLIMEDYGINLFAIDASNQ--GFLYLQFAEVSFDTLSELLPLIRKVEGVHD 66
Query: 92 VKQFEF 97
V+ F
Sbjct: 67 VRTVSF 72
>gi|13476436|ref|NP_108006.1| GTP pyrophosphokinase [Mesorhizobium loti MAFF303099]
gi|14027197|dbj|BAB54151.1| GTP pyrophosphokinase [Mesorhizobium loti MAFF303099]
Length = 742
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
+ + + G + + ++ NI + R+ + + + D LN +L
Sbjct: 668 RVSVTAINAPGSLADIAQVVASNDANIHTLSMVRTAP-DFTEMLIDLEVWDLKHLNRLLS 726
Query: 82 KLSVNVTIRFVKQFE 96
+L N ++ ++
Sbjct: 727 QLKDNSSVSDARRVN 741
>gi|291534164|emb|CBL07277.1| PAS fold [Megamonas hypermegale ART12/1]
Length = 165
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
ICI N D G+V + IL +Y +NI + ++ + + +L +L
Sbjct: 3 ICIENKDRHGLVYDISKILLKYNVNIISMEVIKNT---TYLETEALSYKTEQKILSELHE 59
Query: 86 NVTIRFVKQF 95
I +K
Sbjct: 60 LSGIVQIKSI 69
>gi|256828223|ref|YP_003156951.1| acetolactate synthase, small subunit [Desulfomicrobium baculatum
DSM 4028]
gi|256577399|gb|ACU88535.1| acetolactate synthase, small subunit [Desulfomicrobium baculatum
DSM 4028]
Length = 162
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ I+ + G++ V + G NI ++G + + +C D I+ +++
Sbjct: 3 HVLSILVENEPGVLSRVVGLFSGRGFNIESLNVGPTLEMGVSHITICTSGDEQIIEQIMK 62
Query: 82 KLSVNVTIRFV 92
+L +T+ V
Sbjct: 63 QLHKLITVIKV 73
>gi|206890207|ref|YP_002248622.1| acetolactate synthase small subunit [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742145|gb|ACI21202.1| acetolactate synthase small subunit [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 140
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 17/47 (36%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+I + + G + + +L E INI F + + +
Sbjct: 5 YIISVFAENKPGRLERITKVLAEANINILAFSITSTNGFGIIKFMVD 51
Score = 35.4 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I I D G + V L GINI + +++ + A + ++ +E L
Sbjct: 73 IGIEMKDQPGGLYEVVKTLSSKGINIESAAVYVAETRKKAYLIVEVED--TQKAMESLK 129
>gi|188584588|ref|YP_001928033.1| acetolactate synthase, small subunit [Methylobacterium populi
BJ001]
gi|179348086|gb|ACB83498.1| acetolactate synthase, small subunit [Methylobacterium populi
BJ001]
Length = 180
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + ++ + G + + + G NI + ++ H +S + I + N+V++
Sbjct: 18 NRHTLAVIVDNEPGALARIAGLFSGRGYNIESLTVSETEEARH-LSRITIVTTGTNAVID 76
Query: 82 KLSV 85
++
Sbjct: 77 QIKA 80
>gi|56421195|ref|YP_148513.1| acetolactate synthase 3 regulatory subunit [Geobacillus
kaustophilus HTA426]
gi|56381037|dbj|BAD76945.1| acetolactate synthase(acetohydroxy-acid synthase) small subunit
[Geobacillus kaustophilus HTA426]
Length = 172
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
+I + + G++ + + + NI +G ++ + + D +++
Sbjct: 4 IITMTVNNRPGVLNRITGLFTKRHYNIESITVGHTEIEGISRMTFVVNVDDERTAEQIIK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V
Sbjct: 64 QLNKQIDVLKVNDIT 78
>gi|254417899|ref|ZP_05031623.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
gi|196184076|gb|EDX79052.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
Length = 900
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 24/73 (32%), Gaps = 8/73 (10%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS-----ILNSVLEK 82
+ AD G++ + + + G+NI H+ E A+ + + +
Sbjct: 793 VSGADRPGLLAALSRVFSDEGLNIRSAHVA--SYGERAVDSFYVVDGKGRKITSEQRIAE 850
Query: 83 LS-VNVTIRFVKQ 94
L + +
Sbjct: 851 LRTALEAVLDSRA 863
>gi|160893486|ref|ZP_02074271.1| hypothetical protein CLOL250_01037 [Clostridium sp. L2-50]
gi|156864881|gb|EDO58312.1| hypothetical protein CLOL250_01037 [Clostridium sp. L2-50]
Length = 777
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKLSV 85
I D GI+ + IL E I++ + S+ + I+ S+ +++ K+
Sbjct: 706 IYADDRSGILFDITKILSEANISVNSINSRTSKQGKATITISFSIKSVDQLNAIIAKIRN 765
Query: 86 NVTIRFV 92
+I +
Sbjct: 766 VDSIIDI 772
>gi|322371160|ref|ZP_08045712.1| acetolactate synthase, small subunit [Haladaptatus paucihalophilus
DX253]
gi|320549150|gb|EFW90812.1| acetolactate synthase, small subunit [Haladaptatus paucihalophilus
DX253]
Length = 239
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 10 IKIQEINFDVDIGRLMICIVN--ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
I+I + + R + G++ V + NI +G + HA
Sbjct: 39 IRIDP-EAEAEPRRRTAVVSALVEHEPGVLSRVSGLFSRRRFNIESLTVGPTTVDGHARI 97
Query: 68 FLCIDGSIL--NSVLEKLSVNVTIRFV 92
L ++ + + V ++L+ + V
Sbjct: 98 TLVVEETESGIDQVEKQLAKLKPVIQV 124
>gi|319947807|ref|ZP_08022001.1| GTP diphosphokinase [Dietzia cinnamea P4]
gi|319438531|gb|EFV93457.1| GTP diphosphokinase [Dietzia cinnamea P4]
Length = 788
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 26/86 (30%), Gaps = 8/86 (9%)
Query: 15 INFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + + +V D ++ V +L + +NI + + AIS
Sbjct: 696 VKVEWTPQPGALFLVAIQVEALDRHRLLSDVTKVLADEKVNILSASVQTAGDDRVAISRF 755
Query: 70 CIDGSILN---SVLEKLSVNVTIRFV 92
+ + VL + +
Sbjct: 756 TFEMADPKHLGHVLNAVRRVEGVFDA 781
>gi|319784510|ref|YP_004143986.1| RelA/SpoT family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170398|gb|ADV13936.1| RelA/SpoT family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 742
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
+ + + G + + ++ NI + R+ + + + D LN +L
Sbjct: 668 RVSVTAINAPGSLADIAQVVASNDANIHTLSMVRTAP-DFTEMLIDLEVWDLKHLNRLLS 726
Query: 82 KLSVNVTIRFVKQFE 96
+L N ++ ++
Sbjct: 727 QLKDNSSVSDARRVN 741
>gi|254507261|ref|ZP_05119397.1| RelA/SpoT family protein [Vibrio parahaemolyticus 16]
gi|219549721|gb|EED26710.1| RelA/SpoT family protein [Vibrio parahaemolyticus 16]
Length = 706
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 6/67 (8%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI----DGSILNSVLEKLSVN 86
+ G + + N++ + G NI L + + + D L ++ K+
Sbjct: 638 QNRQGALAELTNVISKTGSNIHG--LSTEERDGRLYTVTVLLTTKDRVHLAGIMRKIKAM 695
Query: 87 VTIRFVK 93
V+
Sbjct: 696 PQTLKVR 702
>gi|270308376|ref|YP_003330434.1| homoserine dehydrogenase [Dehalococcoides sp. VS]
gi|270154268|gb|ACZ62106.1| homoserine dehydrogenase [Dehalococcoides sp. VS]
Length = 433
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + +LG++ I+I+ + A + + SV + L +
Sbjct: 361 DSPGVLALIARVLGDHNISISSVIQKETDEENLTAEIVIMTHPAKEASVQQALVELGGLD 420
Query: 91 FVKQFE 96
VK
Sbjct: 421 KVKDIN 426
>gi|149183318|ref|ZP_01861758.1| prephenate dehydrogenase [Bacillus sp. SG-1]
gi|148848976|gb|EDL63186.1| prephenate dehydrogenase [Bacillus sp. SG-1]
Length = 365
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI----DGS 74
+ I D G++ + ++L E I+I + + + + D
Sbjct: 291 AIPAFYDLYIDIPDHPGVIAEITSVLAEDEISITNIRVLEMREDAVGRLVISFLSNGDLE 350
Query: 75 ILNSVLEK 82
+VL++
Sbjct: 351 KGKTVLQE 358
>gi|159039561|ref|YP_001538814.1| homoserine dehydrogenase [Salinispora arenicola CNS-205]
gi|157918396|gb|ABV99823.1| Homoserine dehydrogenase [Salinispora arenicola CNS-205]
Length = 437
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 10/90 (11%), Positives = 27/90 (30%), Gaps = 10/90 (11%)
Query: 16 NFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFH-----LGRSQSTEHA 65
+ V + + D G++ V + + ++IA G + E A
Sbjct: 338 DLPVRPMGEALTRYHISLDVTDRPGVLAAVAGVFARHDVSIATVRQGSGGGGVAGRGEDA 397
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQF 95
+ + ++ + + V+
Sbjct: 398 DLVIVTHVAPDAALAATVRALRGLDTVRSV 427
>gi|262370172|ref|ZP_06063499.1| homoserine dehydrogenase [Acinetobacter johnsonii SH046]
gi|262315211|gb|EEY96251.1| homoserine dehydrogenase [Acinetobacter johnsonii SH046]
Length = 438
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 26/82 (31%), Gaps = 6/82 (7%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
I I D G++ V IL GI+I I L + S ++ L
Sbjct: 356 GYYIRINAEDQTGVLADVTTILSRAGISIDAIMQQPRLKDLIPIVILTDPVVESKMDEAL 415
Query: 81 EKLSVNV----TIRFVKQFEFN 98
++ I ++ +
Sbjct: 416 AQIQALPVIHGEIVRIRLESLD 437
>gi|145351799|ref|XP_001420250.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580484|gb|ABO98543.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 463
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Query: 10 IKIQEINFD--VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLG--RSQSTEHA 65
I + ++ D I I+ + G++ + + G NI +G R+
Sbjct: 273 IGVWDVPMDENAKYTPHTISILVDNRPGVLDSITGVFARRGYNIQSLGVGPERTFDISRI 332
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFVKQFEF 97
+ + + +L+++ + +
Sbjct: 333 STVVPGSTEDIAMLLKQILKVPYVISAEDITM 364
>gi|154248622|ref|YP_001419580.1| formyltetrahydrofolate deformylase [Xanthobacter autotrophicus
Py2]
gi|154162707|gb|ABS69923.1| formyltetrahydrofolate deformylase [Xanthobacter autotrophicus
Py2]
Length = 289
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 19/67 (28%), Gaps = 1/67 (1%)
Query: 20 DIGRLMICIVN-ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
I + + GIV V L E G NI T + + +
Sbjct: 3 TPSDHFILTFSCPNKPGIVAGVSTFLFEKGCNILEAQQFDDTETNRFFMRVVFNVVASEA 62
Query: 79 VLEKLSV 85
L ++
Sbjct: 63 SLSEIRE 69
>gi|51596541|ref|YP_070732.1| acetolactate synthase 1 regulatory subunit [Yersinia
pseudotuberculosis IP 32953]
gi|145598150|ref|YP_001162226.1| acetolactate synthase 1 regulatory subunit [Yersinia pestis
Pestoides F]
gi|162418670|ref|YP_001606725.1| acetolactate synthase 1 regulatory subunit [Yersinia pestis
Angola]
gi|186895601|ref|YP_001872713.1| acetolactate synthase 1 regulatory subunit [Yersinia
pseudotuberculosis PB1/+]
gi|229894971|ref|ZP_04510149.1| acetolactate synthase I, small subunit [Yersinia pestis Pestoides
A]
gi|51589823|emb|CAH21455.1| putative acetolactate synthase small subunit [Yersinia
pseudotuberculosis IP 32953]
gi|145209846|gb|ABP39253.1| acetolactate synthase, small subunit [Yersinia pestis Pestoides
F]
gi|162351485|gb|ABX85433.1| putative acetolactate synthase I, small subunit [Yersinia pestis
Angola]
gi|186698627|gb|ACC89256.1| amino acid-binding ACT domain protein [Yersinia
pseudotuberculosis PB1/+]
gi|229702066|gb|EEO90087.1| acetolactate synthase I, small subunit [Yersinia pestis Pestoides
A]
Length = 115
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSV 79
R+ + + + G++ + + N+ S E + +L + D L +
Sbjct: 22 PTRVTLLLTVRNHPGVMSHICGLFARRAFNVEGILCMPLPSGEESRIWLQVLDDQRLLQM 81
Query: 80 LEKLSVNVTIRFVK 93
+ +L V + V+
Sbjct: 82 ISQLEKLVDVLQVR 95
>gi|299771871|ref|YP_003733897.1| homoserine dehydrogenase [Acinetobacter sp. DR1]
gi|298701959|gb|ADI92524.1| homoserine dehydrogenase [Acinetobacter sp. DR1]
Length = 437
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
I + D G++ V IL GI+I I L I S ++ L
Sbjct: 355 GYYIRLNAEDQTGVLADVTTILSRAGISIDAIMQQSRLKDLIPIVILTDPIVESKMDEAL 414
Query: 81 EKLSVNVTIR 90
++ IR
Sbjct: 415 AQIQALPAIR 424
>gi|288930517|ref|YP_003434577.1| amino acid-binding ACT domain protein [Ferroglobus placidus DSM
10642]
gi|288892765|gb|ADC64302.1| amino acid-binding ACT domain protein [Ferroglobus placidus DSM
10642]
Length = 165
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 22/58 (37%)
Query: 35 GIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
GIV + +IL I+I + + + + + I ++++ + +
Sbjct: 105 GIVAAISSILARENISIRYMLAEDPDLSIESKLVIVTETKIPGKLVDEFLKVEGVEKI 162
>gi|297543526|ref|YP_003675828.1| acetolactate synthase, small subunit [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296841301|gb|ADH59817.1| acetolactate synthase, small subunit [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 167
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + G++ V + G NI +G ++ + + L + D + V+
Sbjct: 2 HIISVLVNNHPGVLSRVVGLFSRRGYNIESLAVGTTEREDISRITLTVGEDEYTVTQVIR 61
Query: 82 KLSVNVTIRFVKQF 95
+L+ V + V+
Sbjct: 62 QLNKLVDVLKVQNI 75
>gi|289577277|ref|YP_003475904.1| acetolactate synthase, small subunit [Thermoanaerobacter italicus
Ab9]
gi|289526990|gb|ADD01342.1| acetolactate synthase, small subunit [Thermoanaerobacter italicus
Ab9]
Length = 167
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + G++ V + G NI +G ++ + + L + D + V+
Sbjct: 2 HIISVLVNNHPGVLSRVVGLFSRRGYNIESLAVGTTEREDISRITLTVGEDEYTVTQVIR 61
Query: 82 KLSVNVTIRFVKQF 95
+L+ V + V+
Sbjct: 62 QLNKLVDVLKVQNI 75
>gi|153872438|ref|ZP_02001331.1| RelA/SpoT family protein [Beggiatoa sp. PS]
gi|152071096|gb|EDN68669.1| RelA/SpoT family protein [Beggiatoa sp. PS]
Length = 740
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 25/78 (32%), Gaps = 7/78 (8%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
D++ + D G++ + +IL +NI + + ++ +
Sbjct: 663 YPVDIE-------VNAFDRSGLLRDICSILANEKVNIVANNSSTDKHDNSVNMMFTLEVN 715
Query: 75 ILNSVLEKLSVNVTIRFV 92
L + L + V
Sbjct: 716 NLEQLSSTLRKIDNLANV 733
>gi|317402784|gb|EFV83328.1| homoserine dehydrogenase [Achromobacter xylosoxidans C54]
Length = 434
Score = 36.2 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + +L + I+I S I FL ++ +V + + +
Sbjct: 361 DDQPGVLADIARLLADRSISIGSMIQQPSHIGGADIIFL-THEAVEGNVNQAIERIEALP 419
Query: 91 FVK 93
FV+
Sbjct: 420 FVR 422
>gi|295099775|emb|CBK88864.1| acetolactate synthase, small subunit [Eubacterium cylindroides
T2-87]
Length = 175
Score = 36.2 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNS 78
+ + +I I+ + G++ + ++ G NI +G ++ + + D S+
Sbjct: 1 MEKFVIAILVDNQPGVLTRISSMFTRRGFNIDSLTVGETEDPNLSRITIVTHGDDSVRKQ 60
Query: 79 VLEKLSVNVTIRFVKQ 94
++++ + VK
Sbjct: 61 IIKQCKKLYNVMEVKV 76
>gi|150401113|ref|YP_001324879.1| acetolactate synthase 3 regulatory subunit [Methanococcus
aeolicus Nankai-3]
gi|150013816|gb|ABR56267.1| acetolactate synthase, small subunit [Methanococcus aeolicus
Nankai-3]
Length = 169
Score = 36.2 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSV 79
+I ++ + G++ + + NI+ +G + ST+ + + + D ++ V
Sbjct: 3 NTHIISVLVLNKPGVLQRISGLFTRRWYNISSITVGSTDSTDISRMTIVVKGDDKVVEQV 62
Query: 80 LEKLSVNVTIRFV 92
+++L+ + + V
Sbjct: 63 VKQLNKLIEVIKV 75
>gi|87124870|ref|ZP_01080718.1| Acetolactate synthase small subunit [Synechococcus sp. RS9917]
gi|86167749|gb|EAQ69008.1| Acetolactate synthase small subunit [Synechococcus sp. RS9917]
Length = 176
Score = 36.2 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
+ ++ D G + + + G NI +G ++S + + +DG + +
Sbjct: 3 HTLSVLVEDESGALSRIAGLFARRGFNIDSLAVGPAESDGRSRLTMVVDGDDHTLQQMTQ 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLDKLVNVLQV 73
>gi|163760599|ref|ZP_02167680.1| putative gtp pyrophosphokinase (atp:gtp 3'-pyrophosphotransferase)
protein [Hoeflea phototrophica DFL-43]
gi|162282214|gb|EDQ32504.1| putative gtp pyrophosphokinase (atp:gtp 3'-pyrophosphotransferase)
protein [Hoeflea phototrophica DFL-43]
Length = 746
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEK 82
I + + G + V + NI + + R + + L + D LN ++ +
Sbjct: 672 RILVTAINAPGTLADVAQAIAASETNIQNLSMVRVAADFTEMLVDLQVWDLKHLNQLIAQ 731
Query: 83 LSVNVTIRFVKQF 95
L ++ V++
Sbjct: 732 LKSLDSVSTVERI 744
>gi|258516854|ref|YP_003193076.1| acetolactate synthase 3 regulatory subunit [Desulfotomaculum
acetoxidans DSM 771]
gi|257780559|gb|ACV64453.1| acetolactate synthase, small subunit [Desulfotomaculum
acetoxidans DSM 771]
Length = 172
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ + +L NI G ++ + L + D +L+ V++
Sbjct: 3 HTLAVLVVNKPGVLARISGLLSRRMFNIESIAAGYTEEPDVTRITLVVQGDDRVLDQVIK 62
Query: 82 KLSVNVTIRFV 92
++S V + V
Sbjct: 63 QVSKLVDVIKV 73
>gi|225375730|ref|ZP_03752951.1| hypothetical protein ROSEINA2194_01362 [Roseburia inulinivorans
DSM 16841]
gi|225212433|gb|EEG94787.1| hypothetical protein ROSEINA2194_01362 [Roseburia inulinivorans
DSM 16841]
Length = 183
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVT 88
+ G+ + + G NI F G + + + D IL + ++L+
Sbjct: 28 ENNPGVTSHISGLFSRRGYNIDSFSSGVTADPRYTRITIVASGDEQILEQIEKQLAKLED 87
Query: 89 IRFVKQFE 96
+ +K+ E
Sbjct: 88 VVDIKKLE 95
>gi|307546447|ref|YP_003898926.1| homoserine dehydrogenase [Halomonas elongata DSM 2581]
gi|307218471|emb|CBV43741.1| homoserine dehydrogenase [Halomonas elongata DSM 2581]
Length = 438
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 5/85 (5%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
D +P+ + + + ++ D G++ V IL E GI+I +
Sbjct: 338 GDDQPQI-----MPMEEIDTAYYLRLLAVDRPGVLARVATILSEEGISIEALIQKEATEG 392
Query: 63 EHAISFLCIDGSILNSVLEKLSVNV 87
E L + + E +
Sbjct: 393 ELVPIILLTHSTREKYMNEAIRRIE 417
>gi|303248713|ref|ZP_07334966.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio fructosovorans JJ]
gi|302489878|gb|EFL49806.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio fructosovorans JJ]
Length = 750
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEK 82
+ I+ + G++ + +L E G+NI S ++ + + ++K
Sbjct: 660 LSILAKNKKGVLGKISLLLAEEGVNIDS-GAIHSNVDGTTHLIFRVEVRDSSHLYRTIDK 718
Query: 83 LSVNVTIRFVK 93
LS + VK
Sbjct: 719 LSRLDAVMAVK 729
>gi|294852715|ref|ZP_06793388.1| acetolactate synthase [Brucella sp. NVSL 07-0026]
gi|294821304|gb|EFG38303.1| acetolactate synthase [Brucella sp. NVSL 07-0026]
Length = 190
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ ++ + G++ V + G NI + E +S + I V
Sbjct: 20 TPETHTLAVLVDNEPGVLARVIGLFSGRGYNIESLTVS-ETEHERHLSRITIVTRGTPHV 78
Query: 80 LEKLS 84
L+++
Sbjct: 79 LDQIR 83
>gi|284052407|ref|ZP_06382617.1| homoserine dehydrogenase [Arthrospira platensis str. Paraca]
gi|291567149|dbj|BAI89421.1| homoserine dehydrogenase [Arthrospira platensis NIES-39]
Length = 436
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 24/65 (36%), Gaps = 6/65 (9%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVN 86
D+ G++ +G G + ++I + + A + + + + LE+L
Sbjct: 366 RDLPGVIGKLGTCFGNHEVSIESI-VQIDTHGKQA-EIVVVTHDVREGNFHAALEELKQL 423
Query: 87 VTIRF 91
+
Sbjct: 424 DIVDR 428
>gi|284045189|ref|YP_003395529.1| prephenate dehydrogenase [Conexibacter woesei DSM 14684]
gi|283949410|gb|ADB52154.1| Prephenate dehydrogenase [Conexibacter woesei DSM 14684]
Length = 356
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 17/57 (29%), Gaps = 5/57 (8%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLG---RSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ G+V + LG G+NI L A+ L ++
Sbjct: 294 NEPGVVARLALELGRAGVNITDMALYPAPNQAEGVVALWIAG--DEPAERALALIAE 348
>gi|238018680|ref|ZP_04599106.1| hypothetical protein VEIDISOL_00524 [Veillonella dispar ATCC
17748]
gi|237865151|gb|EEP66441.1| hypothetical protein VEIDISOL_00524 [Veillonella dispar ATCC
17748]
Length = 162
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVL 80
+ ++ + GI + + G N+ G + + +A L + D IL+ +
Sbjct: 4 EHQVLVIAKNTAGIGARILALFNRRGFNVTKMTSGITNTPGYARITLTVEADDRILDQIQ 63
Query: 81 EKLSVNVTIRFVKQFE 96
+++ + + VK FE
Sbjct: 64 KQIYKLIDVVKVKVFE 79
>gi|227486337|ref|ZP_03916653.1| ACT domain protein [Anaerococcus lactolyticus ATCC 51172]
gi|227235748|gb|EEI85763.1| ACT domain protein [Anaerococcus lactolyticus ATCC 51172]
Length = 95
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 22/53 (41%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
++ I+ D GI+ V IL Y INI + A+ + + + +
Sbjct: 10 ILTIIGKDRPGIIYQVTEILYNYNINILDMSQTIMEDKFVAMINIDLTKANAD 62
>gi|226312989|ref|YP_002772883.1| hypothetical protein BBR47_34020 [Brevibacillus brevis NBRC
100599]
gi|226095937|dbj|BAH44379.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 259
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL 76
+ M + + G++ V +ILG INI + + + L D +
Sbjct: 1 MEAKKEWYMEYEIARNRPGLLGDVSSILGMLNINIVTINGVDTMRRG--MLLLTDDDEKM 58
Query: 77 NSVLEKLSVNVTIRFVKQ 94
+ + I +
Sbjct: 59 EVLRNVVQKMDNITITRL 76
>gi|221632643|ref|YP_002521864.1| acetolactate synthase small subunit [Thermomicrobium roseum DSM
5159]
gi|221156339|gb|ACM05466.1| acetolactate synthase, small subunit [Thermomicrobium roseum DSM
5159]
Length = 175
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLE 81
+ ++ D G++ + ++ + G NI +G S++ + L D + +++
Sbjct: 7 HTLVVLVEDKPGVMNRIVSLFRQRGFNIDSIAVGHSETPGLSRITLVAQGDDRKIEQLVK 66
Query: 82 KLSVNVTIRFV 92
+L + + +
Sbjct: 67 QLYKILEVIKI 77
>gi|239827932|ref|YP_002950556.1| acetolactate synthase 3 regulatory subunit [Geobacillus sp.
WCH70]
gi|239808225|gb|ACS25290.1| acetolactate synthase, small subunit [Geobacillus sp. WCH70]
Length = 166
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 7/69 (10%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLSVNV 87
+ G++ + + + NI +G ++ + + D ++++L+ +
Sbjct: 4 NNRPGVLNRITGLFTKRHYNIESITVGHTEVEGVSRMTFVVNVEDERTAEQIIKQLNKQI 63
Query: 88 TIRFVKQFE 96
+ V
Sbjct: 64 DVLKVNDIT 72
>gi|312198527|ref|YP_004018588.1| formyltetrahydrofolate deformylase [Frankia sp. EuI1c]
gi|311229863|gb|ADP82718.1| formyltetrahydrofolate deformylase [Frankia sp. EuI1c]
Length = 295
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 18/65 (27%), Gaps = 4/65 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D GIV + +L +G NI + ++ L
Sbjct: 13 RVLVTCPDRPGIVAAISGLLFRHGANITELQQYSTDPFGGTFFLRIEFHR---EELVSGL 69
Query: 84 SVNVT 88
+
Sbjct: 70 AAIED 74
>gi|222085386|ref|YP_002543916.1| guanosine-3' [Agrobacterium radiobacter K84]
gi|221722834|gb|ACM25990.1| guanosine-3' [Agrobacterium radiobacter K84]
Length = 754
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST--EHAISFLCIDGSILNSVL 80
I I + G + V + +NI + R + E A+ D LN +L
Sbjct: 678 GARILINALNEPGTLAKVAQTVAGVDVNIRILNTVRVAADFTEMALDVEVWDLRQLNQLL 737
Query: 81 EKLSVNVTIRFVKQF 95
+L I VK+
Sbjct: 738 VQLKELDCIATVKRL 752
>gi|186683034|ref|YP_001866230.1| homoserine dehydrogenase [Nostoc punctiforme PCC 73102]
gi|186465486|gb|ACC81287.1| homoserine dehydrogenase [Nostoc punctiforme PCC 73102]
Length = 428
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 22/66 (33%), Gaps = 6/66 (9%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVN 86
D G++ +G G YG+++ ++ + + + L ++
Sbjct: 358 NDQPGVIGKLGTCFGNYGVSLESIV--QTGFQGELAEIVVVTHDVPEGNFRQALAEIQNL 415
Query: 87 VTIRFV 92
I +
Sbjct: 416 EAIESI 421
>gi|119493926|ref|ZP_01624488.1| acetolactate synthase III small subunit [Lyngbya sp. PCC 8106]
gi|119452324|gb|EAW33518.1| acetolactate synthase III small subunit [Lyngbya sp. PCC 8106]
Length = 176
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + + D I+ + +
Sbjct: 3 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQSGISRITMIVPGDDRIIEQITK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 63 QLYKLINVLKVQDIT 77
>gi|83591078|ref|YP_431087.1| acetolactate synthase 3 regulatory subunit [Moorella
thermoacetica ATCC 39073]
gi|83573992|gb|ABC20544.1| acetolactate synthase, small subunit [Moorella thermoacetica ATCC
39073]
Length = 172
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLEKLSVNVT 88
+ G++ V + G NI +GR+++ + + +DG I+ V ++L+ +
Sbjct: 10 ENRPGVLTRVAGLFSRRGYNIDSLAVGRTENPAISRMTIVVDGDEQIIEQVSKQLNKLID 69
Query: 89 IRFVKQFE 96
+ +
Sbjct: 70 VIKISDIT 77
>gi|291280497|ref|YP_003497332.1| glycine cleavage system transcriptional repressor [Deferribacter
desulfuricans SSM1]
gi|290755199|dbj|BAI81576.1| glycine cleavage system transcriptional repressor [Deferribacter
desulfuricans SSM1]
Length = 179
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+I + AD GIV + N L E INI + S + + + ++ I ++
Sbjct: 90 KGETFIISVYGADKPGIVYSISNFLAEKNINIVDLQTKVAGSEQKPVYIMVLEVIIPDNF 149
Query: 80 LEK--LSVNVTIRFVKQFEFNVD 100
+K ++ K +++
Sbjct: 150 KDKNWAEELKSV--AKSIGIDIN 170
>gi|256160125|ref|ZP_05457819.1| acetolactate synthase 3 regulatory subunit [Brucella ceti
M490/95/1]
gi|256255331|ref|ZP_05460867.1| acetolactate synthase 3 regulatory subunit [Brucella ceti B1/94]
gi|261222532|ref|ZP_05936813.1| acetolactate synthase 3 regulatory subunit [Brucella ceti B1/94]
gi|265998497|ref|ZP_06111054.1| acetolactate synthase 3 regulatory subunit [Brucella ceti
M490/95/1]
gi|260921116|gb|EEX87769.1| acetolactate synthase 3 regulatory subunit [Brucella ceti B1/94]
gi|262553121|gb|EEZ08955.1| acetolactate synthase 3 regulatory subunit [Brucella ceti
M490/95/1]
Length = 190
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ ++ + G++ V + G NI + E +S + I V
Sbjct: 20 TPETHTLAVLVDNEPGVLARVIGLFSGRGYNIESLTVS-ETEHERHLSRITIVTRGTPHV 78
Query: 80 LEKLS 84
L+++
Sbjct: 79 LDQIR 83
>gi|258512192|ref|YP_003185626.1| acetolactate synthase, small subunit [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478918|gb|ACV59237.1| acetolactate synthase, small subunit [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 176
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL---CIDGSILNSVLEKLSVNV 87
+ G++ + + G NI + +++ E + + +D + L V+++L +
Sbjct: 10 HNKPGVLNRITALFMRKGFNIQSLTVCITENPEISRMTIVMSDMDEAALEQVIKQLHKQI 69
Query: 88 TIRFVKQFE 96
+ V
Sbjct: 70 DVLKVTDLT 78
>gi|220906156|ref|YP_002481467.1| acetolactate synthase 3 regulatory subunit [Cyanothece sp. PCC
7425]
gi|219862767|gb|ACL43106.1| acetolactate synthase, small subunit [Cyanothece sp. PCC 7425]
Length = 172
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + D I+ + +
Sbjct: 3 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQMGVSRITMVVPGDDQIIEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 63 QLYKLINVLKVQDVT 77
>gi|45658597|ref|YP_002683.1| hypothetical protein LIC12763 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45601841|gb|AAS71320.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 104
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 30/82 (36%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
D I + + G ++ + IL I+ + L R+ E + I +
Sbjct: 6 DFKTKYYTFDISSEEGSGTILRMIGILSRKSIDWLDWRLRRNVEGESQKIMIVIRTEEPD 65
Query: 78 SVLEKLSVNVTIRFVKQFEFNV 99
+L IR ++ FE N+
Sbjct: 66 KILNLFRSIPEIREIRYFESNL 87
>gi|50402114|sp|P62223|GLND_RHOPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
++I D +I + D G++ + + + +NIA H+ E A
Sbjct: 837 VEINNNWSD---RYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATF--GERARDVF 891
Query: 70 CIDGSILNSV 79
+ + +
Sbjct: 892 YVTDLLGAQI 901
>gi|33863414|ref|NP_894974.1| homoserine dehydrogenase [Prochlorococcus marinus str. MIT 9313]
gi|33640863|emb|CAE21318.1| Homoserine dehydrogenase:ACT domain [Prochlorococcus marinus str.
MIT 9313]
Length = 438
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSV 85
D G++ +G+ G+ GI+I + I + I + L ++
Sbjct: 365 FNAEDTPGVIGRIGSCFGDRGISIQSIVQFDASDAGAEIVVITHEISQGQMQDALTAITS 424
Query: 86 NVTIR 90
++
Sbjct: 425 MAEVK 429
>gi|316932060|ref|YP_004107042.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
gi|315599774|gb|ADU42309.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
Length = 933
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
++I D +I + D G++ + + + +NIA H+ E A
Sbjct: 841 VEINNNWSD---RYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATF--GERARDVF 895
Query: 70 CIDGSILNSV 79
+ + +
Sbjct: 896 YVTDLLGAQI 905
>gi|253689986|ref|YP_003019176.1| amino acid-binding ACT domain protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251756564|gb|ACT14640.1| amino acid-binding ACT domain protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 103
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKLSVNVTI 89
+ G++ V + N+ + E + +L + D L ++ ++ +
Sbjct: 23 RNHPGVMSHVCGLFARRAFNVEGILCMPLANGEESRIWLLVKDDHRLPQMISQVEKLEDV 82
Query: 90 RFVK 93
V+
Sbjct: 83 LQVR 86
>gi|146329394|ref|YP_001209908.1| guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase
[Dichelobacter nodosus VCS1703A]
gi|146232864|gb|ABQ13842.1| guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase
[Dichelobacter nodosus VCS1703A]
Length = 723
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGR---SQSTEHAISFLCIDG-SILNSVLEKLSVNV 87
D I+ + + + G NI F L R ++ +L ++ L V+ L
Sbjct: 656 DKPMIISQITHEIAAAGSNIRDFRLERHWQQENMRIIKCWLAVENRDHLAKVMRSLRGID 715
Query: 88 TIR 90
+
Sbjct: 716 GVI 718
>gi|50414769|ref|XP_457432.1| DEHA2B11000p [Debaryomyces hansenii CBS767]
gi|49653097|emb|CAG85436.1| DEHA2B11000p [Debaryomyces hansenii]
Length = 465
Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 3/72 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHL-GRSQSTEHAISFLCIDGSILNSVLEKL 83
+ ++ ++ G++ V NIL + NI R +D + + S+ E+L
Sbjct: 395 RVLYIHQNVPGVLKTVNNILSNH--NIEKQFSDSRDDVAYLMADISDVDITDIKSLYEQL 452
Query: 84 SVNVTIRFVKQF 95
+
Sbjct: 453 EQTPYKIATRLL 464
>gi|295982629|pdb|3MTJ|A Chain A, The Crystal Structure Of A Homoserine Dehydrogenase From
Thi Denitrificans To 2.15a
Length = 444
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SV 79
+ + D G++ + IL + I+I E + + + L +
Sbjct: 360 YYLRLRAFDRPGVLADITRILADSSISIDAXVQKEPAEGEEQVDIILLTHVTLEKNVNAA 419
Query: 80 LEKLSVNVTI 89
+ K+ +
Sbjct: 420 IAKIEALDAV 429
>gi|119469475|ref|ZP_01612379.1| transcriptional repressor for cleavage of glycine [Alteromonadales
bacterium TW-7]
gi|119447010|gb|EAW28280.1| transcriptional repressor for cleavage of glycine [Alteromonadales
bacterium TW-7]
Length = 177
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 18/79 (22%), Gaps = 5/79 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV-L 80
+ D G + V + I+I ++ +I V +
Sbjct: 94 AGYTLEYTGIDTPGTLSKVTRFFADNHISICSLKSDTFNEETDTKMRCEVEFNIPIDVDI 153
Query: 81 EKLS----VNVTIRFVKQF 95
+K V
Sbjct: 154 DKFKISFESLSHTLNVDYI 172
>gi|45185656|ref|NP_983372.1| ACL032Cp [Ashbya gossypii ATCC 10895]
gi|44981411|gb|AAS51196.1| ACL032Cp [Ashbya gossypii ATCC 10895]
Length = 470
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG---SILNSVLE 81
+ ++ ++ G++ V NIL ++ NI S + A I S + + +
Sbjct: 400 RVLYIHQNVPGVLKTVNNILSDH--NIEKQFS--DSSGDIAYLMADISNVNYSDIKDIYD 455
Query: 82 KLSVNVTIRFVKQF 95
KL+ ++
Sbjct: 456 KLNATEYKISIRLL 469
>gi|118581914|ref|YP_903164.1| amino acid-binding ACT domain-containing protein [Pelobacter
propionicus DSM 2379]
gi|118504624|gb|ABL01107.1| amino acid-binding ACT domain protein [Pelobacter propionicus DSM
2379]
Length = 186
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 9/78 (11%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--------SV 79
+ AD GIV V L GINI + E + + ++ ++ + +
Sbjct: 105 VYGADQPGIVFRVTRELACQGINITDLTTKLIGTKEQPVYVMMLEAALPDGQTPHQLEKL 164
Query: 80 LEKLSVNVTI-RFVKQFE 96
LE L + + V+
Sbjct: 165 LENLKKELDVEIGVRIVT 182
>gi|284032786|ref|YP_003382717.1| amino acid-binding ACT domain-containing protein [Kribbella
flavida DSM 17836]
gi|283812079|gb|ADB33918.1| amino acid-binding ACT domain protein [Kribbella flavida DSM
17836]
Length = 214
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 22/69 (31%), Gaps = 6/69 (8%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFH-LGRSQSTEHAISFLCIDGSI---LNSVL 80
+ + D G + V LGE +I + + A+ + +D + ++
Sbjct: 5 RLILP--DRPGSLGTVATALGEVDADIHAIEIVEHRRENGTAVDDVVVDLPPGVLPDRLV 62
Query: 81 EKLSVNVTI 89
+
Sbjct: 63 SACHGVPGV 71
>gi|126729879|ref|ZP_01745692.1| acetolactate synthase small subunit [Sagittula stellata E-37]
gi|126709998|gb|EBA09051.1| acetolactate synthase small subunit [Sagittula stellata E-37]
Length = 188
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ ++ + G++ V + G NI + H +S + I V+E
Sbjct: 27 ETHTLAVLVENEPGVLARVIGLFSGRGYNIESLTVAEVDHQGH-LSRITIVTKGTPQVIE 85
Query: 82 KLSV 85
++
Sbjct: 86 QIKA 89
>gi|153948988|ref|YP_001400813.1| acetolactate synthase 1 regulatory subunit [Yersinia
pseudotuberculosis IP 31758]
gi|170024186|ref|YP_001720691.1| acetolactate synthase 1 regulatory subunit [Yersinia
pseudotuberculosis YPIII]
gi|152960483|gb|ABS47944.1| putative acetolactate synthase I, small subunit [Yersinia
pseudotuberculosis IP 31758]
gi|169750720|gb|ACA68238.1| amino acid-binding ACT domain protein [Yersinia
pseudotuberculosis YPIII]
Length = 115
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSV 79
R+ + + + G++ + + N+ S E + +L + D L +
Sbjct: 22 PTRVTLLLTVRNHPGVMSHICGLFARRAFNVEGILCMPLPSGEESRIWLQVLDDQRLLQM 81
Query: 80 LEKLSVNVTIRFVK 93
+ +L V + V+
Sbjct: 82 ISQLEKLVDVLQVR 95
>gi|332108103|gb|EGJ09327.1| GTP diphosphokinase [Rubrivivax benzoatilyticus JA2]
Length = 744
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 9/90 (10%)
Query: 13 QEINFDVDIGRLM-------ICIVNADILGIVVFVGNILGEYGINIAHFHLG--RSQSTE 63
+V+ GR + I +D G++ + + + +N+ H +
Sbjct: 650 PGRVIEVEWGRERDGVYPLDVIIEASDRQGLLRDISEVFAKEKMNVIGVHTQSVKDARGG 709
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFVK 93
A I+ + + + L V I V+
Sbjct: 710 TAWMTFTIEVADTARLAQVLKHLVGIAGVR 739
>gi|312136328|ref|YP_004003665.1| amino acid-binding act domain protein [Methanothermus fervidus DSM
2088]
gi|311224047|gb|ADP76903.1| amino acid-binding ACT domain protein [Methanothermus fervidus DSM
2088]
Length = 167
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 22/63 (34%)
Query: 30 NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
NAD GI+ IL I+I + + + + + I + K +
Sbjct: 102 NADNPGILAEAAKILASENISIRQAYAEDPKIEGNPKLTIITEIPIPGKLFRKFLDINGV 161
Query: 90 RFV 92
+ V
Sbjct: 162 KRV 164
>gi|284988835|ref|YP_003407389.1| malate dehydrogenase [Geodermatophilus obscurus DSM 43160]
gi|284062080|gb|ADB73018.1| Malate dehydrogenase (oxaloacetate- decarboxylating)
[Geodermatophilus obscurus DSM 43160]
Length = 500
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 8/65 (12%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Query: 34 LGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLEKLSVNVTIRF 91
+ + +G G + + S+S + C D + +++ L +
Sbjct: 44 PASIGRIATAVGSAGGAVTAIDVVDSRSDGLTVDVTCSAADAAHSEEMVDALRAVPGV-R 102
Query: 92 VKQFE 96
V++
Sbjct: 103 VRKVS 107
>gi|113955111|ref|YP_730113.1| acetolactate synthase 3 regulatory subunit [Synechococcus sp.
CC9311]
gi|113882462|gb|ABI47420.1| acetolactate synthase, small subunit [Synechococcus sp. CC9311]
Length = 176
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G +++ + + D L + +
Sbjct: 3 HTLSVLVEDESGALSRIAGLFARRGFNIDSLAVGPAETNGQSRLTMVVEGDEHTLQQMSK 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLDKLVNVLQV 73
>gi|298368732|ref|ZP_06980050.1| homoserine dehydrogenase [Neisseria sp. oral taxon 014 str. F0314]
gi|298282735|gb|EFI24222.1| homoserine dehydrogenase [Neisseria sp. oral taxon 014 str. F0314]
Length = 435
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAKENVSIEALIQKGVIDQTTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVT 88
++ +
Sbjct: 405 EKNIKRAIEAIEA 417
>gi|188584783|ref|YP_001916328.1| MgtC/SapB transporter [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349470|gb|ACB83740.1| MgtC/SapB transporter [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 235
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 7/74 (9%), Positives = 23/74 (31%), Gaps = 8/74 (10%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINI--------AHFHLGRSQSTEHAISFLCIDGSILN 77
+ + D G + + +++ E +NI + + ++ + + N
Sbjct: 151 LWVRVIDRPGQLAKISSLIAERNVNIHKVEMTEPEYMEGYQVKAIDITLLLKVPTRLDDN 210
Query: 78 SVLEKLSVNVTIRF 91
L + +
Sbjct: 211 EFLSAIMEMEGVLE 224
>gi|192289024|ref|YP_001989629.1| PII uridylyl-transferase [Rhodopseudomonas palustris TIE-1]
gi|192282773|gb|ACE99153.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
TIE-1]
Length = 933
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
++I D +I + D G++ + + + +NIA H+ E A
Sbjct: 841 VEINNNWSD---RYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATF--GERARDVF 895
Query: 70 CIDGSILNSV 79
+ + +
Sbjct: 896 YVTDLLGAQI 905
>gi|220928121|ref|YP_002505030.1| amino acid-binding ACT domain protein [Clostridium cellulolyticum
H10]
gi|219998449|gb|ACL75050.1| amino acid-binding ACT domain protein [Clostridium cellulolyticum
H10]
Length = 143
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
D G + +IL + GI+I + + ++ A L ++ + +E L
Sbjct: 77 EDKPGGLAKALDILRDNGISIEYMYAFVGKTGNEAFVILRVEN--PETAIETLLK 129
>gi|312212071|emb|CBX92155.1| similar to mitochondrial acetolactate synthase small subunit
[Leptosphaeria maculans]
Length = 328
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLE 81
++ + + G++ V IL G NI + ++ + + + + G ++
Sbjct: 82 HILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCNTEVDDLSRMTIVLQGQDGVIEQARR 141
Query: 82 KLSVN 86
+L
Sbjct: 142 QLEDL 146
>gi|297526960|ref|YP_003668984.1| 4-vinyl reductase 4VR [Staphylothermus hellenicus DSM 12710]
gi|297255876|gb|ADI32085.1| 4-vinyl reductase 4VR [Staphylothermus hellenicus DSM 12710]
Length = 299
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
++ + + GI+ + ++ G NI ++ ++ + +D S E+L
Sbjct: 40 LLLLKAKNKPGIMHRITEVITGKGKNIIKLNVTNIAYGDYGFILILVD-DCDKSCGEELK 98
Query: 85 V 85
Sbjct: 99 N 99
>gi|195953734|ref|YP_002122024.1| (p)ppGpp synthetase I, SpoT/RelA [Hydrogenobaculum sp. Y04AAS1]
gi|195933346|gb|ACG58046.1| (p)ppGpp synthetase I, SpoT/RelA [Hydrogenobaculum sp. Y04AAS1]
Length = 703
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEKLS 84
+V +D GI+ V + + INI + A + + +++
Sbjct: 632 VVASDRPGILSEVSSAFTKSNINIVEASTKTNNL-NIANMDFKVQLRNTKDLKRAFDEIK 690
Query: 85 VNVTIRFVKQF 95
+ VK+
Sbjct: 691 SIKGVESVKRV 701
>gi|45441875|ref|NP_993414.1| acetolactate synthase 1 regulatory subunit [Yersinia pestis biovar
Microtus str. 91001]
gi|45436737|gb|AAS62291.1| putative acetolactate synthase small subunit [Yersinia pestis
biovar Microtus str. 91001]
Length = 120
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSV 79
R+ + + + G++ + + N+ S E + +L + D L +
Sbjct: 27 PTRVTLLLTVRNHPGVMSHICGLFARRAFNVEGILCMPLPSGEESRIWLQVLDDQRLLQM 86
Query: 80 LEKLSVNVTIRFVK 93
+ +L V + V+
Sbjct: 87 ISQLEKLVDVLQVR 100
>gi|39933668|ref|NP_945944.1| PII uridylyl-transferase [Rhodopseudomonas palustris CGA009]
gi|39647514|emb|CAE26035.1| Protein PII uridylyltransferase [Rhodopseudomonas palustris CGA009]
Length = 949
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
++I D +I + D G++ + + + +NIA H+ E A
Sbjct: 857 VEINNNWSD---RYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATF--GERARDVF 911
Query: 70 CIDGSILNSV 79
+ + +
Sbjct: 912 YVTDLLGAQI 921
>gi|17231612|ref|NP_488160.1| homoserine dehydrogenase [Nostoc sp. PCC 7120]
gi|17133255|dbj|BAB75819.1| homoserine dehydrogenase [Nostoc sp. PCC 7120]
Length = 429
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVN 86
D G++ +G G +G++I ++ + + + + L ++
Sbjct: 359 KDQAGVIGQLGTCFGNHGVSIESIV--QTGFQGELVEIVVVTHDVREGEFRQALAEIQNL 416
Query: 87 VTIRFV 92
I +
Sbjct: 417 PAIDSI 422
>gi|255293020|dbj|BAH90116.1| formyltetrahydrofolate deformylase [uncultured bacterium]
Length = 301
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 16/50 (32%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ I + AD G+V V L + G NI + I
Sbjct: 15 ISPEEGRIVMHCADRPGVVAAVSTFLADAGANIIESDQTTTDPDGGPIFL 64
>gi|254472092|ref|ZP_05085492.1| protein-P-II uridylyltransferase [Pseudovibrio sp. JE062]
gi|211958375|gb|EEA93575.1| protein-P-II uridylyltransferase [Pseudovibrio sp. JE062]
Length = 942
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
++ + D G++ + + +NIA H+G E A+ + V
Sbjct: 848 NYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTF--GEKAVDVFYVTDLTGQKV 903
>gi|197283686|gb|ACH57394.1| Rsh [Novosphingobium sp. Rr 2-17]
Length = 697
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 25/87 (28%), Gaps = 11/87 (12%)
Query: 12 IQEINFDVDIGRL------MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
I D+ G + +V + G + V IL N+ + + +
Sbjct: 606 IDADWLDLSWGERTTGSVGRLRLVLYNRPGTLAEVTQILASNRANVTNLQM---TQRDEP 662
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFV 92
D + + L L+ V
Sbjct: 663 FGTYEADLEVTD--LAHLTRIVGSLRA 687
>gi|153834225|ref|ZP_01986892.1| acetolactate synthase, small subunit [Vibrio harveyi HY01]
gi|156973147|ref|YP_001444054.1| acetolactate synthase 3 regulatory subunit [Vibrio harveyi ATCC
BAA-1116]
gi|148869413|gb|EDL68419.1| acetolactate synthase, small subunit [Vibrio harveyi HY01]
gi|156524741|gb|ABU69827.1| hypothetical protein VIBHAR_00826 [Vibrio harveyi ATCC BAA-1116]
Length = 164
Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + G + V + + G NI ++ + + + D L + +
Sbjct: 3 HIISLLMENQPGALSRVVGLFSQRGYNIESLNVSPTDDETLSRLNITTTSDEMQLEQIQK 62
Query: 82 KLSVNVTIRFVKQF-EFN 98
+L + + V++ EF
Sbjct: 63 QLHKLIDVLKVQEVTEFE 80
>gi|307354832|ref|YP_003895883.1| prephenate dehydratase [Methanoplanus petrolearius DSM 11571]
gi|307158065|gb|ADN37445.1| prephenate dehydratase [Methanoplanus petrolearius DSM 11571]
Length = 269
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + + GIN++ R ID ++ + + + I
Sbjct: 197 EDRPGLLYEIIGVFAAMGINLSRIE-SRPSKRGMGSYVFFIDFAMTSYSGDAVRRLKEIT 255
Query: 91 FVKQF 95
FV++
Sbjct: 256 FVREL 260
>gi|303328112|ref|ZP_07358551.1| putative ACT domain protein [Desulfovibrio sp. 3_1_syn3]
gi|302861938|gb|EFL84873.1| putative ACT domain protein [Desulfovibrio sp. 3_1_syn3]
Length = 187
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 6/62 (9%), Positives = 18/62 (29%), Gaps = 1/62 (1%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
D+ ++ D G++ + + +G+NI + + +
Sbjct: 90 DLKCDPFVVTADGPDKPGLIAAMSRVFARHGVNIESLK-AILGEGGEDHALFVFEVMVPE 148
Query: 78 SV 79
Sbjct: 149 DA 150
>gi|269836765|ref|YP_003318993.1| (p)ppGpp synthetase I, SpoT/RelA [Sphaerobacter thermophilus DSM
20745]
gi|269786028|gb|ACZ38171.1| (p)ppGpp synthetase I, SpoT/RelA [Sphaerobacter thermophilus DSM
20745]
Length = 748
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 35/95 (36%), Gaps = 16/95 (16%)
Query: 8 RFIKI---QE----INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLG-RS 59
R +++ + +V + D +G++ + ++ E +N+ G
Sbjct: 651 RLVQVSWGNDQRQTYPVNVRLEA-------WDRVGLLRDITTLVAEEKVNMLSVLTGVND 703
Query: 60 QSTEHAISFLCIDGSIL-NSVLEKLSVNVTIRFVK 93
T + L ++ + VL+KL + V+
Sbjct: 704 DRTVTVLMTLEVESVQQLSRVLQKLETIRDVYDVR 738
>gi|198283028|ref|YP_002219349.1| acetolactate synthase small subunit [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|198247549|gb|ACH83142.1| acetolactate synthase, small subunit [Acidithiobacillus
ferrooxidans ATCC 53993]
Length = 163
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I I+ + G + V + G NI + + + + I+ VL+
Sbjct: 5 HIISILLENEAGALSRVAGLFSARGYNIEAMTVAPTHDPSISRMTVATRGSDEIMEQVLK 64
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + V
Sbjct: 65 QLNKLVEVVRVHDLT 79
>gi|163746063|ref|ZP_02153422.1| homoserine dehydrogenase [Oceanibulbus indolifex HEL-45]
gi|161380808|gb|EDQ05218.1| homoserine dehydrogenase [Oceanibulbus indolifex HEL-45]
Length = 428
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ + D G + + +LGE G++I T + + + N++
Sbjct: 345 TPAPYYLRMALVDKPGALAKIATVLGEAGVSIYRMRQYEHADTSAPV-LIVTHKTSRNAL 403
Query: 80 LEKLSVNVTI 89
+E L+
Sbjct: 404 VEALANMDKT 413
>gi|17986901|ref|NP_539535.1| acetolactate synthase 3 regulatory subunit [Brucella melitensis
bv. 1 str. 16M]
gi|23502259|ref|NP_698386.1| acetolactate synthase 3 regulatory subunit [Brucella suis 1330]
gi|62290283|ref|YP_222076.1| acetolactate synthase 3 regulatory subunit [Brucella abortus bv.
1 str. 9-941]
gi|82700205|ref|YP_414779.1| acetolactate synthase 3 regulatory subunit [Brucella melitensis
biovar Abortus 2308]
gi|148559432|ref|YP_001259284.1| acetolactate synthase 3 regulatory subunit [Brucella ovis ATCC
25840]
gi|161619335|ref|YP_001593222.1| acetolactate synthase 3 regulatory subunit [Brucella canis ATCC
23365]
gi|163843643|ref|YP_001628047.1| acetolactate synthase 3 regulatory subunit [Brucella suis ATCC
23445]
gi|189024516|ref|YP_001935284.1| Acetolactate synthase, small subunit [Brucella abortus S19]
gi|225627841|ref|ZP_03785878.1| acetolactate synthase, small subunit [Brucella ceti str. Cudo]
gi|225852871|ref|YP_002733104.1| acetolactate synthase 3 regulatory subunit [Brucella melitensis
ATCC 23457]
gi|237815790|ref|ZP_04594787.1| acetolactate synthase, small subunit [Brucella abortus str. 2308
A]
gi|254689585|ref|ZP_05152839.1| acetolactate synthase 3 regulatory subunit [Brucella abortus bv.
6 str. 870]
gi|254694075|ref|ZP_05155903.1| acetolactate synthase 3 regulatory subunit [Brucella abortus bv.
3 str. Tulya]
gi|254697726|ref|ZP_05159554.1| acetolactate synthase 3 regulatory subunit [Brucella abortus bv.
2 str. 86/8/59]
gi|254702111|ref|ZP_05163939.1| acetolactate synthase 3 regulatory subunit [Brucella suis bv. 5
str. 513]
gi|254704648|ref|ZP_05166476.1| acetolactate synthase 3 regulatory subunit [Brucella suis bv. 3
str. 686]
gi|254708063|ref|ZP_05169891.1| acetolactate synthase 3 regulatory subunit [Brucella
pinnipedialis M163/99/10]
gi|254710434|ref|ZP_05172245.1| acetolactate synthase 3 regulatory subunit [Brucella
pinnipedialis B2/94]
gi|254714426|ref|ZP_05176237.1| acetolactate synthase 3 regulatory subunit [Brucella ceti
M644/93/1]
gi|254717323|ref|ZP_05179134.1| acetolactate synthase 3 regulatory subunit [Brucella ceti
M13/05/1]
gi|254730616|ref|ZP_05189194.1| acetolactate synthase 3 regulatory subunit [Brucella abortus bv.
4 str. 292]
gi|256031927|ref|ZP_05445541.1| acetolactate synthase 3 regulatory subunit [Brucella
pinnipedialis M292/94/1]
gi|256045021|ref|ZP_05447922.1| acetolactate synthase 3 regulatory subunit [Brucella melitensis
bv. 1 str. Rev.1]
gi|256061448|ref|ZP_05451592.1| acetolactate synthase 3 regulatory subunit [Brucella neotomae
5K33]
gi|256113932|ref|ZP_05454725.1| acetolactate synthase 3 regulatory subunit [Brucella melitensis
bv. 3 str. Ether]
gi|256257834|ref|ZP_05463370.1| acetolactate synthase 3 regulatory subunit [Brucella abortus bv.
9 str. C68]
gi|256263645|ref|ZP_05466177.1| acetolactate synthase [Brucella melitensis bv. 2 str. 63/9]
gi|256369804|ref|YP_003107315.1| acetolactate synthase 3 regulatory subunit [Brucella microti CCM
4915]
gi|260169063|ref|ZP_05755874.1| acetolactate synthase 3 regulatory subunit [Brucella sp. F5/99]
gi|260546825|ref|ZP_05822564.1| acetolactate synthase [Brucella abortus NCTC 8038]
gi|260565380|ref|ZP_05835864.1| ABC transporter, ATP-binding protein [Brucella melitensis bv. 1
str. 16M]
gi|260566106|ref|ZP_05836576.1| acetolactate synthase [Brucella suis bv. 4 str. 40]
gi|260755112|ref|ZP_05867460.1| acetolactate synthase 3 regulatory subunit [Brucella abortus bv.
6 str. 870]
gi|260758331|ref|ZP_05870679.1| acetolactate synthase 3 regulatory subunit [Brucella abortus bv.
4 str. 292]
gi|260762157|ref|ZP_05874500.1| acetolactate synthase 3 regulatory subunit [Brucella abortus bv.
2 str. 86/8/59]
gi|260884124|ref|ZP_05895738.1| acetolactate synthase 3 regulatory subunit [Brucella abortus bv.
9 str. C68]
gi|261214371|ref|ZP_05928652.1| acetolactate synthase 3 regulatory subunit [Brucella abortus bv.
3 str. Tulya]
gi|261219152|ref|ZP_05933433.1| acetolactate synthase 3 regulatory subunit [Brucella ceti
M13/05/1]
gi|261315564|ref|ZP_05954761.1| acetolactate synthase 3 regulatory subunit [Brucella
pinnipedialis M163/99/10]
gi|261318003|ref|ZP_05957200.1| acetolactate synthase 3 regulatory subunit [Brucella
pinnipedialis B2/94]
gi|261322214|ref|ZP_05961411.1| acetolactate synthase 3 regulatory subunit [Brucella ceti
M644/93/1]
gi|261325454|ref|ZP_05964651.1| acetolactate synthase 3 regulatory subunit [Brucella neotomae
5K33]
gi|261752681|ref|ZP_05996390.1| acetolactate synthase 3 regulatory subunit [Brucella suis bv. 5
str. 513]
gi|261755341|ref|ZP_05999050.1| acetolactate synthase 3 regulatory subunit [Brucella suis bv. 3
str. 686]
gi|261758567|ref|ZP_06002276.1| acetolactate synthase [Brucella sp. F5/99]
gi|265989033|ref|ZP_06101590.1| acetolactate synthase 3 regulatory subunit [Brucella
pinnipedialis M292/94/1]
gi|265991448|ref|ZP_06104005.1| acetolactate synthase 3 regulatory subunit [Brucella melitensis
bv. 1 str. Rev.1]
gi|265995284|ref|ZP_06107841.1| acetolactate synthase 3 regulatory subunit [Brucella melitensis
bv. 3 str. Ether]
gi|297248671|ref|ZP_06932389.1| acetolactate synthase, small subunit [Brucella abortus bv. 5 str.
B3196]
gi|17982543|gb|AAL51799.1| acetolactate synthase small subunit [Brucella melitensis bv. 1
str. 16M]
gi|23348232|gb|AAN30301.1| acetolactate synthase, small subunit [Brucella suis 1330]
gi|62196415|gb|AAX74715.1| IlvN, acetolactate synthase, small subunit [Brucella abortus bv.
1 str. 9-941]
gi|82616306|emb|CAJ11363.1| Amino acid-binding ACT:Acetolactate synthase, small subunit
[Brucella melitensis biovar Abortus 2308]
gi|148370689|gb|ABQ60668.1| acetolactate synthase, small subunit [Brucella ovis ATCC 25840]
gi|161336146|gb|ABX62451.1| acetolactate synthase, small subunit [Brucella canis ATCC 23365]
gi|163674366|gb|ABY38477.1| acetolactate synthase, small subunit [Brucella suis ATCC 23445]
gi|189020088|gb|ACD72810.1| Acetolactate synthase, small subunit [Brucella abortus S19]
gi|225617846|gb|EEH14891.1| acetolactate synthase, small subunit [Brucella ceti str. Cudo]
gi|225641236|gb|ACO01150.1| acetolactate synthase, small subunit [Brucella melitensis ATCC
23457]
gi|237789088|gb|EEP63299.1| acetolactate synthase, small subunit [Brucella abortus str. 2308
A]
gi|255999967|gb|ACU48366.1| acetolactate synthase 3 regulatory subunit [Brucella microti CCM
4915]
gi|260095875|gb|EEW79752.1| acetolactate synthase [Brucella abortus NCTC 8038]
gi|260151448|gb|EEW86542.1| ABC transporter, ATP-binding protein [Brucella melitensis bv. 1
str. 16M]
gi|260155624|gb|EEW90704.1| acetolactate synthase [Brucella suis bv. 4 str. 40]
gi|260668649|gb|EEX55589.1| acetolactate synthase 3 regulatory subunit [Brucella abortus bv.
4 str. 292]
gi|260672589|gb|EEX59410.1| acetolactate synthase 3 regulatory subunit [Brucella abortus bv.
2 str. 86/8/59]
gi|260675220|gb|EEX62041.1| acetolactate synthase 3 regulatory subunit [Brucella abortus bv.
6 str. 870]
gi|260873652|gb|EEX80721.1| acetolactate synthase 3 regulatory subunit [Brucella abortus bv.
9 str. C68]
gi|260915978|gb|EEX82839.1| acetolactate synthase 3 regulatory subunit [Brucella abortus bv.
3 str. Tulya]
gi|260924241|gb|EEX90809.1| acetolactate synthase 3 regulatory subunit [Brucella ceti
M13/05/1]
gi|261294904|gb|EEX98400.1| acetolactate synthase 3 regulatory subunit [Brucella ceti
M644/93/1]
gi|261297226|gb|EEY00723.1| acetolactate synthase 3 regulatory subunit [Brucella
pinnipedialis B2/94]
gi|261301434|gb|EEY04931.1| acetolactate synthase 3 regulatory subunit [Brucella neotomae
5K33]
gi|261304590|gb|EEY08087.1| acetolactate synthase 3 regulatory subunit [Brucella
pinnipedialis M163/99/10]
gi|261738551|gb|EEY26547.1| acetolactate synthase [Brucella sp. F5/99]
gi|261742434|gb|EEY30360.1| acetolactate synthase 3 regulatory subunit [Brucella suis bv. 5
str. 513]
gi|261745094|gb|EEY33020.1| acetolactate synthase 3 regulatory subunit [Brucella suis bv. 3
str. 686]
gi|262766397|gb|EEZ12186.1| acetolactate synthase 3 regulatory subunit [Brucella melitensis
bv. 3 str. Ether]
gi|263002232|gb|EEZ14807.1| acetolactate synthase 3 regulatory subunit [Brucella melitensis
bv. 1 str. Rev.1]
gi|263093699|gb|EEZ17704.1| acetolactate synthase [Brucella melitensis bv. 2 str. 63/9]
gi|264661230|gb|EEZ31491.1| acetolactate synthase 3 regulatory subunit [Brucella
pinnipedialis M292/94/1]
gi|297175840|gb|EFH35187.1| acetolactate synthase, small subunit [Brucella abortus bv. 5 str.
B3196]
gi|326409410|gb|ADZ66475.1| Acetolactate synthase, small subunit [Brucella melitensis M28]
gi|326539118|gb|ADZ87333.1| acetolactate synthase, small subunit [Brucella melitensis M5-90]
Length = 190
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ ++ + G++ V + G NI + E +S + I V
Sbjct: 20 TPETHTLAVLVDNEPGVLARVIGLFSGRGYNIESLTVS-ETEHERHLSRITIVTRGTPHV 78
Query: 80 LEKLS 84
L+++
Sbjct: 79 LDQIR 83
>gi|6225562|sp|Q55141|ILVH_SYNY3 RecName: Full=Acetolactate synthase small subunit; AltName:
Full=Acetohydroxy-acid synthase small subunit;
Short=AHAS; Short=ALS
Length = 172
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + + D + + + +
Sbjct: 3 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGSAEQGDVSRITMVVPGDENTIEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L V + V+
Sbjct: 63 QLYKLVNVIKVQDIT 77
>gi|48477980|ref|YP_023686.1| hypothetical protein PTO0908 [Picrophilus torridus DSM 9790]
gi|48430628|gb|AAT43493.1| conserved archael protein [Picrophilus torridus DSM 9790]
Length = 170
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 28/64 (43%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
+ GI+ V I+ ++GI+I E+ +F+ G I +S+L + ++
Sbjct: 107 NRPGIISGVIRIISDHGISIRQVVTDDPDLIENPKAFIITQGLIPSSLLNDIKRVSGVKA 166
Query: 92 VKQF 95
V
Sbjct: 167 VTIL 170
>gi|329897893|ref|ZP_08272243.1| GTP pyrophosphokinase [gamma proteobacterium IMCC3088]
gi|328921019|gb|EGG28438.1| GTP pyrophosphokinase [gamma proteobacterium IMCC3088]
Length = 702
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCIDGSIL-NSVLEKLSVNVT 88
+ G++ + + INI G + L + + V+++L
Sbjct: 634 ENRRGVIAVIATRINSMDINIEKIATGDKDHLFALVDLELQVQSRVHLARVMKRLRNIDG 693
Query: 89 IRFVKQFE 96
+R V + +
Sbjct: 694 VRKVTRVK 701
>gi|256545119|ref|ZP_05472485.1| GTP diphosphokinase [Anaerococcus vaginalis ATCC 51170]
gi|256399160|gb|EEU12771.1| GTP diphosphokinase [Anaerococcus vaginalis ATCC 51170]
Length = 725
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 7/75 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV----- 79
I I D GI+ + ++ ++I ++ RS I L + +
Sbjct: 651 RIQITTKDKTGIIFEITKLISTENVSIEAMNV-RSNENHEGIIDLTVSVPNTEKLNELIM 709
Query: 80 -LEKLSVNVTIRFVK 93
L+ + + +I VK
Sbjct: 710 KLKTIKMIESIYRVK 724
>gi|241662864|ref|YP_002981224.1| homoserine dehydrogenase [Ralstonia pickettii 12D]
gi|309782210|ref|ZP_07676939.1| homoserine dehydrogenase [Ralstonia sp. 5_7_47FAA]
gi|240864891|gb|ACS62552.1| Homoserine dehydrogenase [Ralstonia pickettii 12D]
gi|308918981|gb|EFP64649.1| homoserine dehydrogenase [Ralstonia sp. 5_7_47FAA]
Length = 439
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 5/72 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVNV 87
D G++ + IL E GI+I S+ E + + + + + +
Sbjct: 365 DETGVLADITRILAEGGISIDAMLQKESREGEPQTDIIMLSHVTVEKRVNAAIAAIEALP 424
Query: 88 TIRF-VKQFEFN 98
T+ V +
Sbjct: 425 TVLSKVTRIRME 436
>gi|227496216|ref|ZP_03926515.1| GTP diphosphokinase [Actinomyces urogenitalis DSM 15434]
gi|226834247|gb|EEH66630.1| GTP diphosphokinase [Actinomyces urogenitalis DSM 15434]
Length = 775
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D G++ + +L + +N+ A+ R + + S L+ L L +
Sbjct: 702 DRGGLLADITRVLADNHVNLMSANIGTSRDRVVTGHFVVELAEASHLDHTLASLRRIDGV 761
Query: 90 RFVK 93
+
Sbjct: 762 FEAR 765
>gi|187928291|ref|YP_001898778.1| homoserine dehydrogenase [Ralstonia pickettii 12J]
gi|187725181|gb|ACD26346.1| Homoserine dehydrogenase [Ralstonia pickettii 12J]
Length = 439
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 5/72 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVNV 87
D G++ + IL E GI+I S+ E + + + + + +
Sbjct: 365 DETGVLADITRILAEGGISIDAMLQKESREGEPQTDIIMLSHVTVEKRVNAAIAAIEALP 424
Query: 88 TIRF-VKQFEFN 98
T+ V +
Sbjct: 425 TVLSKVTRIRME 436
>gi|147677071|ref|YP_001211286.1| acetolactate synthase 3 regulatory subunit [Pelotomaculum
thermopropionicum SI]
gi|146273168|dbj|BAF58917.1| acetolactate synthase, small (regulatory) subunit [Pelotomaculum
thermopropionicum SI]
Length = 164
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCIDGSILNSVLE 81
+ ++ + G++ + +L NI G ++ + + D IL+ V++
Sbjct: 3 HTLAVLVVNKPGVLARISGLLSRRVFNIESIAAGYTEEPDVTRITLVIKGDTHILDQVMK 62
Query: 82 KLSVNVTIRFVKQFE 96
+LS V + V + +
Sbjct: 63 QLSKLVDVIKVVELK 77
>gi|302386586|ref|YP_003822408.1| acetolactate synthase, small subunit [Clostridium saccharolyticum
WM1]
gi|302197214|gb|ADL04785.1| acetolactate synthase, small subunit [Clostridium saccharolyticum
WM1]
Length = 166
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVNVT 88
+ G++ V + G NI +G + ++ + D IL+ + ++L
Sbjct: 11 DNTSGVLSRVAGLFSRRGYNIESLTVGVTADERYSRMTVVSTGDQEILDQIEKQLRKLED 70
Query: 89 IRFVKQFE 96
+R +K+ +
Sbjct: 71 VRDIKELK 78
>gi|167646977|ref|YP_001684640.1| homoserine dehydrogenase [Caulobacter sp. K31]
gi|167349407|gb|ABZ72142.1| Homoserine dehydrogenase [Caulobacter sp. K31]
Length = 429
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 22/62 (35%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G + + L E ++I F + L + +++L+ +S +
Sbjct: 356 RDEPGAIAAISETLAECAVSIDSFLQKPVEGAGGVPIVLVTHATPESNLLDAISRIEKLH 415
Query: 91 FV 92
V
Sbjct: 416 AV 417
>gi|325264147|ref|ZP_08130879.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Clostridium sp. D5]
gi|324030631|gb|EGB91914.1| L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[Clostridium sp. D5]
Length = 531
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 28/89 (31%), Gaps = 5/89 (5%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNA-DILGIVVFVGNILGEYGINIAHFHLGRSQS 61
G + +KI + ++ + + D G V ++L +YG A S
Sbjct: 132 GGGTVKLLKIDGFDVEIVGDCYELVLKAKTDRTGAEELVKDLLKDYG---ATEGYYISGE 188
Query: 62 TEHAISF-LCIDGSILNSVLEKLSVNVTI 89
+ + + L+ L +
Sbjct: 189 IDGVYLINIKSRQKHTDEFLKNLEKKAGV 217
>gi|302845911|ref|XP_002954493.1| hypothetical protein VOLCADRAFT_64912 [Volvox carteri f.
nagariensis]
gi|300260165|gb|EFJ44386.1| hypothetical protein VOLCADRAFT_64912 [Volvox carteri f.
nagariensis]
Length = 543
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
I I + D ++ + LG+ G+NI H + ++ +D L +L
Sbjct: 154 ITIASVDQPKLLSRLSEALGDLGLNIREAHAFNTNDG-FSLDVFVVDQWQPQQ-LARLR 210
>gi|241954166|ref|XP_002419804.1| regulatory subunit of acetolacetate synthase, putative [Candida
dubliniensis CD36]
gi|223643145|emb|CAX42019.1| regulatory subunit of acetolacetate synthase, putative [Candida
dubliniensis CD36]
Length = 306
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
+ ++ + + G++ V L G NI + ++ + + + + ++
Sbjct: 73 APPKQHVLNCLVQNEPGVLSGVSGTLAARGFNIDSLVVCNTEVKDLSRMTIVLKGQDGVV 132
Query: 77 NSVLEKLSVNVTIRFV 92
++ V + V
Sbjct: 133 EQARRQIEDLVPVYAV 148
>gi|163841325|ref|YP_001625730.1| prephenate dehydrogenase [Renibacterium salmoninarum ATCC 33209]
gi|162954801|gb|ABY24316.1| prephenate dehydrogenase [Renibacterium salmoninarum ATCC 33209]
Length = 374
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 21/53 (39%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
D G + + +GE G+N+ L S I + + ++++L
Sbjct: 313 DDEPGQIAQLLTEIGEIGVNLEDLRLDHSSGRNAGIVEISVLPGKREMLIDEL 365
>gi|325963844|ref|YP_004241750.1| homoserine dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
gi|323469931|gb|ADX73616.1| homoserine dehydrogenase [Arthrobacter phenanthrenivorans Sphe3]
Length = 435
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 29/91 (31%), Gaps = 7/91 (7%)
Query: 12 IQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC- 70
+ + D + I + AD G++ + + E+G++I + E +
Sbjct: 339 VPALPIDAAVTSYYIGLDVADQPGVLARIAQLFAEHGVSIEIMRQTIHRDAESNVESAEL 398
Query: 71 --IDGSILNSVL----EKLSVNVTIRFVKQF 95
+ + L E + I V
Sbjct: 399 RIVTHRASEAALAATVEAVKGLDVINSVTSV 429
>gi|240146700|ref|ZP_04745301.1| acetolactate synthase, small subunit [Roseburia intestinalis
L1-82]
gi|257201133|gb|EEU99417.1| acetolactate synthase, small subunit [Roseburia intestinalis
L1-82]
gi|291536294|emb|CBL09406.1| acetolactate synthase, small subunit [Roseburia intestinalis
M50/1]
gi|291538833|emb|CBL11944.1| acetolactate synthase, small subunit [Roseburia intestinalis
XB6B4]
Length = 174
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVT 88
+ G+ + + G NI F G + + + D IL + ++L+
Sbjct: 11 ENNPGVTSHISGLFSRRGYNIDSFSSGVTADPRYTRITIVATGDEQILEQIEKQLAKLED 70
Query: 89 IRFVKQFE 96
+ +K+ E
Sbjct: 71 VVDIKKLE 78
>gi|220904391|ref|YP_002479703.1| amino acid-binding ACT domain protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219868690|gb|ACL49025.1| amino acid-binding ACT domain protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 143
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
+ G + V + L E GINI L + +C D ++L++
Sbjct: 11 ENRAGRLAEVTHALAEAGINIRALSLADTSDFGILRMIVC-DHEKAKTILKE 61
>gi|212638570|ref|YP_002315090.1| GTP pyrophosphokinase [Anoxybacillus flavithermus WK1]
gi|212560050|gb|ACJ33105.1| GTP pyrophosphokinase (ppGpp synthetase) [Anoxybacillus
flavithermus WK1]
Length = 732
Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 10/85 (11%)
Query: 14 EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-D 72
E D++I D G++ V + E NI+ + A + I
Sbjct: 653 EYTVDIEITGY-------DRRGLLNEVLQAVNETKTNISAVSGRTDHRNKMATIHMTIFI 705
Query: 73 GSIL--NSVLEKLSVNVTIRFVKQF 95
++ V+E++ I V++
Sbjct: 706 HNVSHLQKVVERIKQIPDIYSVRRI 730
>gi|320102232|ref|YP_004177823.1| homoserine dehydrogenase [Isosphaera pallida ATCC 43644]
gi|319749514|gb|ADV61274.1| homoserine dehydrogenase [Isosphaera pallida ATCC 43644]
Length = 444
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 7/78 (8%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGR------SQSTEHAISFLCIDGSILN 77
+ D G++ + ILG++GI+IA S E + + +
Sbjct: 358 HYLRFGILDQPGVLGRIALILGQHGISIASVIQHDPGEKLPEDSGEVVVPLVVMTHLARE 417
Query: 78 SVLE-KLSVNVTIRFVKQ 94
S LE L + V+
Sbjct: 418 SALERALEQIDRLDCVRA 435
>gi|307152685|ref|YP_003888069.1| acetolactate synthase small subunit [Cyanothece sp. PCC 7822]
gi|306982913|gb|ADN14794.1| acetolactate synthase, small subunit [Cyanothece sp. PCC 7822]
Length = 175
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + D I+ + +
Sbjct: 3 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQPGISRITMVVPGDDGIIEQITK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 63 QLYKLINVLKVQDIT 77
>gi|86605789|ref|YP_474552.1| homoserine dehydrogenase [Synechococcus sp. JA-3-3Ab]
gi|86554331|gb|ABC99289.1| homoserine dehydrogenase [Synechococcus sp. JA-3-3Ab]
Length = 448
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLG--RSQSTEHAISFLCIDGSILNSVLEKLSV 85
++ D G++ +G G +G+++ + E I + + L ++
Sbjct: 374 VLAQDRPGVMGAIGTCFGRHGVSLESITQKECHQELAEIVILTHSVREADCRQALAEIQQ 433
Query: 86 NVTI 89
+
Sbjct: 434 LPQV 437
>gi|319937500|ref|ZP_08011905.1| GTP pyrophosphokinase [Coprobacillus sp. 29_1]
gi|319807340|gb|EFW03949.1| GTP pyrophosphokinase [Coprobacillus sp. 29_1]
Length = 740
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ D+++ D ++ + +LG+ +NI + + G + L ++
Sbjct: 662 KRFEVDIELVG-------LDRPNLLNDIITVLGQVKVNILNINAGIHDMDANIQLRLSVE 714
Query: 73 G-SILNSVLEKLSVNVTIRFVKQF 95
+L ++ L+ I +K+
Sbjct: 715 NAEVLQLTIDNLNKIQGIYEIKRV 738
>gi|319945592|ref|ZP_08019844.1| acetolactate synthase small subunit [Streptococcus australis ATCC
700641]
gi|319748191|gb|EFW00433.1| acetolactate synthase small subunit [Streptococcus australis ATCC
700641]
Length = 158
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G +++ + + ID + + V + +
Sbjct: 4 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGATENPNVSRITIIIDVASHDEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ V+
Sbjct: 64 QLNRQVDVIRVRDIT 78
>gi|256828603|ref|YP_003157331.1| amino acid-binding ACT domain protein [Desulfomicrobium baculatum
DSM 4028]
gi|256577779|gb|ACU88915.1| amino acid-binding ACT domain protein [Desulfomicrobium baculatum
DSM 4028]
Length = 143
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
+ G + V L E INI L + + + D VL+
Sbjct: 11 ENRAGRLAEVTKTLAENQINIRALSLADTSDFGI-LRLIVTDNEKAKEVLKA 61
>gi|205374215|ref|ZP_03227014.1| GTP diphosphokinase [Bacillus coahuilensis m4-4]
Length = 708
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 21/104 (20%)
Query: 3 SDGKP-RFIKI---------QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIA 52
DG+ R I++ +E N D++I D G++ V ++ E NI
Sbjct: 609 GDGELNRLIEVEWETDVNNRKEYNVDIEISGF-------DRRGLLNEVLQVVNESKTNI- 660
Query: 53 HFHLGRSQSTEHAISFLCID-GSIL--NSVLEKLSVNVTIRFVK 93
GR+ + A + I ++ V+EK+ + V+
Sbjct: 661 TAVAGRTDRNKMATISMSISIQNVSHLQRVVEKIKQISDVYSVR 704
>gi|170289921|ref|YP_001736737.1| hypothetical protein Kcr_0296 [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170174001|gb|ACB07054.1| Acetolactate synthase, small subunit [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 144
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
S + R I + ++ + IV +D G++ ++L E +++ +
Sbjct: 42 SKKELRIIPL----LELQAKVYRLRIVMSDRPGVLARAASLLAEERVDLIMTESRTIRRG 97
Query: 63 EHAISFLCIDGSILN----SVLEKLSVNVTIRFV 92
E A + D S +++E++ ++ V
Sbjct: 98 ETAEWVIVADLSNCQLDVSALVERIKSLEFVKSV 131
>gi|124022556|ref|YP_001016863.1| acetolactate synthase 3 regulatory subunit [Prochlorococcus
marinus str. MIT 9303]
gi|123962842|gb|ABM77598.1| Acetolactate synthase small subunit [Prochlorococcus marinus str.
MIT 9303]
Length = 176
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G +++ + + D L + +
Sbjct: 3 HTLSVLVEDESGALSRIAGLFARRGFNIDSLAVGPAETPGQSRLTMVVEGDDHALQQMSK 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLDKLVNVLQV 73
>gi|298529911|ref|ZP_07017313.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509285|gb|EFI33189.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfonatronospira thiodismutans
ASO3-1]
Length = 720
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIA--HFHLGRSQSTEHAISFLCIDGSI 75
D M+C + G++ + +L + +NI F TE + + D +
Sbjct: 642 DFPAKIKMLC---QNRKGVLAKISELLTKEDVNIDAGTFKSNVDGKTEVVFTIMVQDSNH 698
Query: 76 LNSVLEKLSVNVTIRFV 92
L S +EKL ++ V
Sbjct: 699 LYSTIEKLRKLSEVQEV 715
>gi|163802680|ref|ZP_02196571.1| acetolactate synthase III small subunit [Vibrio sp. AND4]
gi|159173568|gb|EDP58388.1| acetolactate synthase III small subunit [Vibrio sp. AND4]
Length = 164
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + G + V + + G NI ++ + + + D L + +
Sbjct: 3 HIISLLMENQPGALSRVVGLFSQRGYNIESLNVSPTDDETLSRLNITTNSDEMQLEQIQK 62
Query: 82 KLSVNVTIRFVKQF-EFN 98
+L + + V++ EF
Sbjct: 63 QLHKLIDVLKVQEVTEFE 80
>gi|24371957|ref|NP_715999.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella
oneidensis MR-1]
gi|24345803|gb|AAN53444.1|AE015484_2 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Shewanella oneidensis MR-1]
Length = 701
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF---LCIDGSIL-NSVLE 81
+ + + G + + +I+ G NI + L + + + I +V+
Sbjct: 629 LRVEIVNHQGALAKITSIIAAEGSNIHN--LSTEERDGRVYLINLRISVKDRIHLANVMR 686
Query: 82 KLSVNVTIRF 91
++ V +
Sbjct: 687 RIRVLPEVLR 696
>gi|323706434|ref|ZP_08117996.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323534219|gb|EGB24008.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 718
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID---GSILNSVLEKLS 84
I+ D G++ V +IL + I++ + R+ AI L ++ L ++ KL
Sbjct: 647 IMAIDRYGLLTDVTSILADIKISVRAVN-ARTTRDNIAIINLTLEITSKEQLEKIMNKLK 705
Query: 85 VNVTIRFV 92
+ V
Sbjct: 706 ALDGVTDV 713
>gi|313679693|ref|YP_004057432.1| acetolactate synthase, small subunit [Oceanithermus profundus DSM
14977]
gi|313152408|gb|ADR36259.1| acetolactate synthase, small subunit [Oceanithermus profundus DSM
14977]
Length = 170
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ ++ D ++ + ++ G NI +G++ + + + D + V +
Sbjct: 3 HIVSVLVEDHPRVLTRITSLFARRGFNIESLAVGKTHLPGLSRISIVVLGDDRTIEQVEK 62
Query: 82 KLSVNVTIRFV 92
+L+ V + V
Sbjct: 63 QLNKLVEVIKV 73
>gi|294852017|ref|ZP_06792690.1| GTP pyrophosphokinase rsh [Brucella sp. NVSL 07-0026]
gi|294820606|gb|EFG37605.1| GTP pyrophosphokinase rsh [Brucella sp. NVSL 07-0026]
Length = 176
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + + I NI + + R+ + + + D LN ++
Sbjct: 102 RISVSAINSPGSLAEIAQIAAANDANIHNLSMVRTAP-DFTEMIIDVEVWDLKHLNRIIS 160
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 161 QLKESASVSSAKRVN 175
>gi|222148078|ref|YP_002549035.1| GTP pyrophosphohydrolases/synthetases RelA/SpoT family
[Agrobacterium vitis S4]
gi|221735066|gb|ACM36029.1| GTP pyrophosphohydrolases/synthetases RelA/SpoT family
[Agrobacterium vitis S4]
Length = 746
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST--EHAISFLCIDGSILNSVLEK 82
I I + G + V ++ INI + R + E A D LN +L +
Sbjct: 672 RILINAINEPGTLAKVAQLIAGLDINIRLLSMMRVAADFTEMAFDLDVWDLRQLNQLLSQ 731
Query: 83 LSVNVTIRFVKQF 95
L + K+
Sbjct: 732 LKELDCVATAKRV 744
>gi|220913101|ref|YP_002488410.1| homoserine dehydrogenase [Arthrobacter chlorophenolicus A6]
gi|219859979|gb|ACL40321.1| Homoserine dehydrogenase [Arthrobacter chlorophenolicus A6]
Length = 442
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 27/91 (29%), Gaps = 7/91 (7%)
Query: 12 IQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC- 70
+ + D + I + AD G++ + + G++I + E +
Sbjct: 346 VPALPIDASVTSYYIGLDVADQPGVLARIAQLFAGNGVSIETMRQTIHRDAESNVESAEL 405
Query: 71 --IDGSILNSVL----EKLSVNVTIRFVKQF 95
+ + L E + I V
Sbjct: 406 RIVTHRASEAALAATVEAVKGLDVINSVTSV 436
>gi|266624446|ref|ZP_06117381.1| acetolactate synthase, small subunit [Clostridium hathewayi DSM
13479]
gi|288863706|gb|EFC96004.1| acetolactate synthase, small subunit [Clostridium hathewayi DSM
13479]
Length = 166
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA-ISFLCI-DGSILNSVLEKLSVNVT 88
+ G++ V + G NI +G + ++ ++ + I D IL+ + ++L
Sbjct: 11 DNTSGVLSRVAGLFSRRGYNIESLTVGVTADERYSRMTVVSIGDQEILDQIEKQLRKLED 70
Query: 89 IRFVKQFE 96
+R +K+ +
Sbjct: 71 VRDIKELK 78
>gi|260551081|ref|ZP_05825285.1| homoserine dehydrogenase [Acinetobacter sp. RUH2624]
gi|260405848|gb|EEW99336.1| homoserine dehydrogenase [Acinetobacter sp. RUH2624]
Length = 437
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
I + D G++ V IL GI+I I L I S ++ L
Sbjct: 355 GYYIRLNAEDQTGVLADVTTILSRAGISIDAIMQQSRLKDLIPIVILTDPIVESKMDDAL 414
Query: 81 EKLSVNVTIR 90
++ IR
Sbjct: 415 AQIQALPAIR 424
>gi|227821398|ref|YP_002825368.1| GTP pyrophosphohydrolase/synthetase, RelA/SpoT family
[Sinorhizobium fredii NGR234]
gi|227340397|gb|ACP24615.1| GTP pyrophosphohydrolase/synthetase, RelA/SpoT family
[Sinorhizobium fredii NGR234]
Length = 741
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 8/76 (10%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SV 79
I + + G + + + +NI +GR + S L D + + +
Sbjct: 667 RIAVSALNEPGTLAEIAQAIATSDVNIRSLSMGRVAAD---FSELQFDLEVWDLRQLNHL 723
Query: 80 LEKLSVNVTIRFVKQF 95
+ +L +I VK+
Sbjct: 724 MTQLKELQSISLVKRL 739
>gi|218666346|ref|YP_002425234.1| acetolactate synthase, small subunit [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|218518559|gb|ACK79145.1| acetolactate synthase, small subunit [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 161
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I I+ + G + V + G NI + + + + I+ VL+
Sbjct: 3 HIISILLENEAGALSRVAGLFSARGYNIEAMTVAPTHDPSISRMTVATRGSDEIMEQVLK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + V
Sbjct: 63 QLNKLVEVVRVHDLT 77
>gi|126465431|ref|YP_001040540.1| L-threonine ammonia-lyase [Staphylothermus marinus F1]
gi|126014254|gb|ABN69632.1| L-threonine ammonia-lyase [Staphylothermus marinus F1]
Length = 419
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 3/62 (4%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQST---EHAISFLCIDGSILNSVLEKLSVNV 87
D G + V ++L ++ +NI R A + + V L
Sbjct: 350 WDKPGELGKVISVLAKHNLNIIDIRHDRWDPRLLPSKAKLEIVFEAKTSEDVELALVELE 409
Query: 88 TI 89
I
Sbjct: 410 RI 411
>gi|329907906|ref|ZP_08274732.1| GTP pyrophosphokinase [Oxalobacteraceae bacterium IMCC9480]
gi|327546888|gb|EGF31806.1| GTP pyrophosphokinase [Oxalobacteraceae bacterium IMCC9480]
Length = 757
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 25/71 (35%), Gaps = 5/71 (7%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK--- 82
I ++ AD G++ + + IN+ + + HA + +++
Sbjct: 687 IFVLAADRQGLLRDISEVFLREKINVVG--VSTQSAKGHARMAFTAEIGSTAQLMKALSV 744
Query: 83 LSVNVTIRFVK 93
+ + V+
Sbjct: 745 IREVDGVMEVR 755
>gi|325281515|ref|YP_004254057.1| acetolactate synthase, small subunit [Odoribacter splanchnicus
DSM 20712]
gi|324313324|gb|ADY33877.1| acetolactate synthase, small subunit [Odoribacter splanchnicus
DSM 20712]
Length = 173
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 6/72 (8%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVL 80
+I + + + +G++ + + INI S + + ++
Sbjct: 4 EYIITVFSENKVGLLSQITTVFTCRDINIESLTTSESSIPGIHKFTIVVITGPEKIEKLV 63
Query: 81 EKLSVNVTIRFV 92
+++ + +
Sbjct: 64 KQIEKKIDVLKA 75
>gi|320101839|ref|YP_004177430.1| acetolactate synthase small subunit [Isosphaera pallida ATCC
43644]
gi|319749121|gb|ADV60881.1| acetolactate synthase, small subunit [Isosphaera pallida ATCC
43644]
Length = 191
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ + + G++ V +L G NI +G +++ E + + D L V +
Sbjct: 13 HVLSALVMNQPGVLSHVAGMLASRGFNIDSLAVGETETPELSRMTFVVVGDDRHLEQVRK 72
Query: 82 KLSVNVTIRFVKQFEF 97
+L + VK +
Sbjct: 73 QLEKI--VTVVKVLDI 86
>gi|285018478|ref|YP_003376189.1| chorismate-mutase_prephenate_dehydratase [Xanthomonas albilineans
GPE PC73]
gi|283473696|emb|CBA16199.1| putative chorismate-mutase_prephenate_dehydratase protein
[Xanthomonas albilineans]
Length = 387
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 27/83 (32%), Gaps = 10/83 (12%)
Query: 19 VDIGRL----MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI-SFLCIDG 73
++ ++ D G + V + +GI++ S + F+ + G
Sbjct: 297 FPPSGHDRTSVLVFIH-DKPGALFDVLSPFARHGISMNRIESRPSHQGKWEYGFFIDLAG 355
Query: 74 SILNS----VLEKLSVNVTIRFV 92
+ + L +L + V
Sbjct: 356 HVEDEAMKQALAELKAHSAQIKV 378
>gi|239637054|ref|ZP_04678048.1| prephenate dehydrogenase [Staphylococcus warneri L37603]
gi|239597404|gb|EEQ79907.1| prephenate dehydrogenase [Staphylococcus warneri L37603]
Length = 363
Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ + D G++ V +IL + I+I++ L + E L I +
Sbjct: 297 LYVDIPDKPGMISKVTHILSLHNISISN--LKILEVREDIYGALQISFKNPEDRERGIQA 354
Query: 86 NVTI 89
Sbjct: 355 LDQF 358
>gi|322411207|gb|EFY02115.1| hypothetical protein SDD27957_02155 [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 220
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 9/74 (12%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
F+++ + + + ++ + +G++ + + L + +NI + + + I
Sbjct: 130 FLEVSGYGVE----GIRVVLLADNAVGVLAKIADCLSQEKLNIRRIVVANRSNGKTVIE- 184
Query: 69 LCIDGSILNSVLEK 82
+ +DG+ L +
Sbjct: 185 MQLDGTTAPQWLSE 198
>gi|320449602|ref|YP_004201698.1| formyltetrahydrofolate deformylase [Thermus scotoductus SA-01]
gi|320149771|gb|ADW21149.1| formyltetrahydrofolate deformylase [Thermus scotoductus SA-01]
Length = 285
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 14/55 (25%), Gaps = 1/55 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGS 74
+ + I D GIV V L +G NI L
Sbjct: 1 MEEARLLITCPDRPGIVAAVSGFLYAHGANITDLQQYSTDPEGGTFFMRLAFTTP 55
>gi|320534553|ref|ZP_08035003.1| acetolactate synthase, small subunit [Actinomyces sp. oral taxon
171 str. F0337]
gi|326773788|ref|ZP_08233071.1| acetolactate synthase, small subunit [Actinomyces viscosus C505]
gi|329944840|ref|ZP_08292892.1| acetolactate synthase, small subunit [Actinomyces sp. oral taxon
170 str. F0386]
gi|320133226|gb|EFW25724.1| acetolactate synthase, small subunit [Actinomyces sp. oral taxon
171 str. F0337]
gi|326637018|gb|EGE37921.1| acetolactate synthase, small subunit [Actinomyces viscosus C505]
gi|328529773|gb|EGF56666.1| acetolactate synthase, small subunit [Actinomyces sp. oral taxon
170 str. F0386]
Length = 173
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS-- 74
+ + ++ + G++ V + G NI +G ++ + + + D
Sbjct: 1 MSAVSEKHTLSVLVENKPGVLTRVSALFTRRGFNIHSLAVGPTEHEDISRITVIADAEGL 60
Query: 75 ILNSVLEKLSVNVTIRFVKQFEFNVD 100
+ V ++L+ V + K E + D
Sbjct: 61 AMEQVTKQLNKLVNVL--KIVELDPD 84
>gi|315926132|ref|ZP_07922332.1| ACT domain protein [Pseudoramibacter alactolyticus ATCC 23263]
gi|315620576|gb|EFV00557.1| ACT domain protein [Pseudoramibacter alactolyticus ATCC 23263]
Length = 145
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 30/59 (50%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G + + ++L E GI IA+ + ++T++A+ L + + ++ + L+ I
Sbjct: 77 DSPGGMSAIVDVLAEAGIGIAYAYSFLPKNTKNAVIVLKVMDADNDAAAKVLTEAPGII 135
>gi|254785314|ref|YP_003072743.1| homoserine dehydrogenase [Teredinibacter turnerae T7901]
gi|237683832|gb|ACR11096.1| homoserine dehydrogenase [Teredinibacter turnerae T7901]
Length = 439
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 29/87 (33%), Gaps = 8/87 (9%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGS 74
+ + + D G++ V I E GI+I + + +S + + + +
Sbjct: 349 PIEEIESAYYLRLSALDQPGVLSRVTQIFSEAGISIEALIQKEPKEGQEHVSVILLTNRT 408
Query: 75 ILNSVLEKLSVNV-------TIRFVKQ 94
I V + + + ++
Sbjct: 409 IEKQVNKAIEQIESLSPIQGNVVRIRV 435
>gi|169634634|ref|YP_001708370.1| homoserine dehydrogenase [Acinetobacter baumannii SDF]
gi|169153426|emb|CAP02563.1| homoserine dehydrogenase [Acinetobacter baumannii]
Length = 437
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
I + D G++ V IL GI+I I L I S ++ L
Sbjct: 355 GYYIRLNAEDQTGVLADVTTILSRAGISIDAIMQQSRLKDLIPIVILTDPIVESKMDDAL 414
Query: 81 EKLSVNVTIR 90
++ IR
Sbjct: 415 AQIQALPAIR 424
>gi|170738589|ref|YP_001767244.1| acetolactate synthase, small subunit [Methylobacterium sp. 4-46]
gi|168192863|gb|ACA14810.1| acetolactate synthase, small subunit [Methylobacterium sp. 4-46]
Length = 180
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 16 NFDVDI-GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
V+ R + ++ + G++ + + G NI + ++ T+H +S + I +
Sbjct: 11 PVRVEPVARHTLAVIVDNEPGVLSRIAGLFSGRGYNIESLTVSETEHTQH-LSRITIVTT 69
Query: 75 ILNSVLEKLSV 85
N+V++++
Sbjct: 70 GTNAVIDQIKA 80
>gi|56475925|ref|YP_157514.1| chorismate mutase/prephenate dehydratase [Aromatoleum aromaticum
EbN1]
gi|56311968|emb|CAI06613.1| Chorismate mutase/prephenate dehydratase [Aromatoleum aromaticum
EbN1]
Length = 354
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 28/77 (36%), Gaps = 7/77 (9%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCI----DGSI 75
+ + + G V + L ++G++++ R + ++ I D
Sbjct: 270 DKTSLVCSAPNRPGAVHALLEPLAKHGVSMSKLQ-SRPARGGLWEYVFYMDIEGHRDDPE 328
Query: 76 LNSVLEKLSVNVTIRFV 92
+ + L++L+ V
Sbjct: 329 VAAALKELNERAGFVKV 345
>gi|306844287|ref|ZP_07476879.1| acetolactate synthase, small subunit [Brucella sp. BO1]
gi|306275359|gb|EFM57100.1| acetolactate synthase, small subunit [Brucella sp. BO1]
Length = 190
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ ++ + G++ V + G NI + E +S + I V
Sbjct: 20 TPETHTLAVLVDNEPGVLARVIGLFSGRGYNIESLTVS-ETEHERHLSRITIVTRGTPHV 78
Query: 80 LEKLS 84
L+++
Sbjct: 79 LDQIR 83
>gi|302039386|ref|YP_003799708.1| homoserine dehydrogenase [Candidatus Nitrospira defluvii]
gi|300607450|emb|CBK43783.1| Homoserine dehydrogenase [Candidatus Nitrospira defluvii]
Length = 437
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 20/55 (36%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVN 86
D G++ + +LG YGI+I+ + + + + V L
Sbjct: 363 DRPGVLSQIAGVLGRYGISISSVLQQGRKEGQTVPVVIMTHMAKERDVQNALREI 417
>gi|229515684|ref|ZP_04405143.1| transcriptional repressor protein TyrR [Vibrio cholerae TMA 21]
gi|229347453|gb|EEO12413.1| transcriptional repressor protein TyrR [Vibrio cholerae TMA 21]
Length = 537
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + ++ ID + ++ ++ ++
Sbjct: 32 EDRLGLTRELLDILASKSIDLRGIEI--DVIGIIYLNCPDIDFETFSELMAEIRRIPGVK 89
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 90 DVRKIQF 96
>gi|169797494|ref|YP_001715287.1| homoserine dehydrogenase [Acinetobacter baumannii AYE]
gi|184156582|ref|YP_001844921.1| homoserine dehydrogenase [Acinetobacter baumannii ACICU]
gi|260556386|ref|ZP_05828605.1| homoserine dehydrogenase [Acinetobacter baumannii ATCC 19606]
gi|169150421|emb|CAM88318.1| homoserine dehydrogenase [Acinetobacter baumannii AYE]
gi|183208176|gb|ACC55574.1| Homoserine dehydrogenase [Acinetobacter baumannii ACICU]
gi|194474669|gb|ACF74455.1| homoserine dehydrogenase [Acinetobacter baumannii]
gi|260410441|gb|EEX03740.1| homoserine dehydrogenase [Acinetobacter baumannii ATCC 19606]
Length = 437
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
I + D G++ V IL GI+I I L I S ++ L
Sbjct: 355 GYYIRLNAEDQTGVLADVTTILSRAGISIDAIMQQSRLKDLIPIVILTDPIVESKMDDAL 414
Query: 81 EKLSVNVTIR 90
++ IR
Sbjct: 415 AQIQALPAIR 424
>gi|24373194|ref|NP_717237.1| PII uridylyl-transferase [Shewanella oneidensis MR-1]
gi|30173051|sp|Q8EGH8|GLND_SHEON RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|24347412|gb|AAN54681.1|AE015608_10 protein-P-II uridylyltransferase [Shewanella oneidensis MR-1]
Length = 861
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 6/73 (8%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSV 79
G + + D + V +L IN+ A+ + L DG
Sbjct: 673 GGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKDNYALDTFVILEQDGEP---- 728
Query: 80 LEKLSVNVTIRFV 92
+ +LS +IR
Sbjct: 729 VSQLSRIQSIRKA 741
>gi|322391481|ref|ZP_08064950.1| acetolactate synthase small subunit [Streptococcus peroris ATCC
700780]
gi|321145564|gb|EFX40956.1| acetolactate synthase small subunit [Streptococcus peroris ATCC
700780]
Length = 158
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G ++ + + + ID + + V + +
Sbjct: 4 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGATEDSNVSRITIIIDVASNDEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ V+
Sbjct: 64 QLNRQVDVIRVRDIT 78
>gi|313672830|ref|YP_004050941.1| homoserine dehydrogenase [Calditerrivibrio nitroreducens DSM 19672]
gi|312939586|gb|ADR18778.1| homoserine dehydrogenase [Calditerrivibrio nitroreducens DSM 19672]
Length = 441
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFL 69
I +I + + D G++ + +LG+Y I+I A G +
Sbjct: 349 NIDDIR-----SSFYLRFMALDKPGVLSKIAGVLGKYNISISAAIQPGDYSPGDVVPLVF 403
Query: 70 CIDGSILNSVLEKLSVNVTIRFVK 93
+I V + + ++ +VK
Sbjct: 404 MTHETIGRHVSDAVREIDSMEYVK 427
>gi|293610048|ref|ZP_06692349.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827280|gb|EFF85644.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 437
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
I + D G++ V IL GI+I I L I S ++ L
Sbjct: 355 GYYIRLNAEDQTGVLADVTTILSRAGISIDAIMQQSRLKDLIPIVILTDPIVESKMDDAL 414
Query: 81 EKLSVNVTIR 90
++ IR
Sbjct: 415 AQIQALPAIR 424
>gi|255065168|ref|ZP_05317023.1| homoserine dehydrogenase [Neisseria sicca ATCC 29256]
gi|255050589|gb|EET46053.1| homoserine dehydrogenase [Neisseria sicca ATCC 29256]
Length = 435
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 21/73 (28%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAKENVSIEALIQKGVIDQTTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVT 88
++ ++
Sbjct: 405 EKNIKRAIAAIEA 417
>gi|255560441|ref|XP_002521235.1| protein kinase, putative [Ricinus communis]
gi|223539503|gb|EEF41091.1| protein kinase, putative [Ricinus communis]
Length = 558
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
I D ++ + ++L E G+NI H S +++ +DG
Sbjct: 181 HEITFSTDDKPKLLSQLTSLLAEIGLNIQEAHAF-STVDGYSLDVFVVDGWP 231
>gi|33863446|ref|NP_895006.1| acetolactate synthase 3 regulatory subunit [Prochlorococcus
marinus str. MIT 9313]
gi|33640895|emb|CAE21351.1| Acetolactate synthase small subunit [Prochlorococcus marinus str.
MIT 9313]
Length = 176
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G +++ + + D L + +
Sbjct: 3 HTLSVLVEDESGALSRIAGLFARRGFNIDSLAVGPAETPGQSRLTMVVEGDDHALQQMSK 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLDKLVNVLQV 73
>gi|323494591|ref|ZP_08099695.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Vibrio
brasiliensis LMG 20546]
gi|323311194|gb|EGA64354.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Vibrio
brasiliensis LMG 20546]
Length = 706
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 6/67 (8%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI----DGSILNSVLEKLSVN 86
+ G + + N++ + G NI L + + + D L ++ K+
Sbjct: 638 QNRQGALAELTNVISKTGSNIHG--LSTEERDGRLYTVTVLLTTKDRVHLAGIMRKIKAM 695
Query: 87 VTIRFVK 93
V+
Sbjct: 696 PQTLKVR 702
>gi|260902959|ref|ZP_05911354.1| transcriptional regulatory protein TyrR [Vibrio parahaemolyticus
AQ4037]
gi|308107451|gb|EFO44991.1| transcriptional regulatory protein TyrR [Vibrio parahaemolyticus
AQ4037]
Length = 514
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + S + D + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEIDISGIIYLNCPDIDFDTF--SELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|239502062|ref|ZP_04661372.1| homoserine dehydrogenase [Acinetobacter baumannii AB900]
Length = 433
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
I + D G++ V IL GI+I I L I S ++ L
Sbjct: 351 GYYIRLNAEDQTGVLADVTTILSRAGISIDAIMQQSRLKDLIPIVILTDPIVESKMDDAL 410
Query: 81 EKLSVNVTIR 90
++ IR
Sbjct: 411 AQIQALPAIR 420
>gi|226941695|ref|YP_002796769.1| RelA [Laribacter hongkongensis HLHK9]
gi|226716622|gb|ACO75760.1| RelA [Laribacter hongkongensis HLHK9]
Length = 736
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 29/82 (35%), Gaps = 8/82 (9%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
D++ ++ D G++ + ++L +N+ H + + +
Sbjct: 662 FAIDIE-------VMARDRSGLLRDISDVLSREKLNVTAVHTQSRDAHARMCFTIEVRQV 714
Query: 75 IL-NSVLEKLSVNVTIRFVKQF 95
VL ++ ++ V++
Sbjct: 715 ADIQRVLARVGDVNGVQEVRRI 736
>gi|213155692|ref|YP_002317737.1| homoserine dehydrogenase [Acinetobacter baumannii AB0057]
gi|215484930|ref|YP_002327169.1| Homoserine dehydrogenase(HDH) [Acinetobacter baumannii AB307-0294]
gi|229577107|ref|YP_001083316.2| homoserine dehydrogenase [Acinetobacter baumannii ATCC 17978]
gi|294838162|ref|ZP_06782845.1| homoserine dehydrogenase [Acinetobacter sp. 6013113]
gi|294840867|ref|ZP_06785550.1| homoserine dehydrogenase [Acinetobacter sp. 6014059]
gi|301346535|ref|ZP_07227276.1| homoserine dehydrogenase [Acinetobacter baumannii AB056]
gi|301512498|ref|ZP_07237735.1| homoserine dehydrogenase [Acinetobacter baumannii AB058]
gi|301594841|ref|ZP_07239849.1| homoserine dehydrogenase [Acinetobacter baumannii AB059]
gi|193076107|gb|ABO10714.2| homoserine dehydrogenase [Acinetobacter baumannii ATCC 17978]
gi|213054852|gb|ACJ39754.1| homoserine dehydrogenase [Acinetobacter baumannii AB0057]
gi|213986689|gb|ACJ56988.1| Homoserine dehydrogenase(HDH) [Acinetobacter baumannii AB307-0294]
gi|322506469|gb|ADX01923.1| Homoserine dehydrogenase [Acinetobacter baumannii 1656-2]
gi|323516348|gb|ADX90729.1| homoserine dehydrogenase [Acinetobacter baumannii TCDC-AB0715]
Length = 433
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
I + D G++ V IL GI+I I L I S ++ L
Sbjct: 351 GYYIRLNAEDQTGVLADVTTILSRAGISIDAIMQQSRLKDLIPIVILTDPIVESKMDDAL 410
Query: 81 EKLSVNVTIR 90
++ IR
Sbjct: 411 AQIQALPAIR 420
>gi|162452004|ref|YP_001614371.1| acetolactate synthase [Sorangium cellulosum 'So ce 56']
gi|161162586|emb|CAN93891.1| Acetolactate synthase [Sorangium cellulosum 'So ce 56']
Length = 182
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLEKLSVNVT 88
D G++ V ++ NI +GR+ + L D + L V
Sbjct: 14 EDRPGVLNRVASLFRRRAYNIESLSVGRTHIAGISRLTLVLEADEDGARRLEANLYKLVN 73
Query: 89 IRFVKQFE 96
+V+
Sbjct: 74 TLWVRDVT 81
>gi|156937097|ref|YP_001434893.1| ACT domain-containing protein [Ignicoccus hospitalis KIN4/I]
gi|156566081|gb|ABU81486.1| ACT domain-containing protein [Ignicoccus hospitalis KIN4/I]
Length = 91
Score = 35.8 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+I +V D +GIV + ++L E G+NI ++ + +D + +
Sbjct: 2 PQYAVITVVGKDRVGIVAGISSVLAEQGVNIVDI--SQTVLRGMFAMIMVVDLAGAKVSV 59
Query: 81 EKLSVN 86
+L
Sbjct: 60 GELREL 65
>gi|269126116|ref|YP_003299486.1| amino acid-binding ACT domain-containing protein [Thermomonospora
curvata DSM 43183]
gi|268311074|gb|ACY97448.1| amino acid-binding ACT domain protein [Thermomonospora curvata
DSM 43183]
Length = 234
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 4/64 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLSVNVT 88
D G + V LG G +I + A+ + G+ ++ + E L+
Sbjct: 11 DRPGSLGKVARTLGAAGADIVQMTVLERD-GGRALDDFTVLWPTGAGVDRLREGLTSVPG 69
Query: 89 IRFV 92
+ V
Sbjct: 70 VEVV 73
>gi|240850192|ref|YP_002971585.1| GTP pyrophosphokinase [Bartonella grahamii as4aup]
gi|240267315|gb|ACS50903.1| GTP pyrophosphokinase [Bartonella grahamii as4aup]
Length = 741
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 8/70 (11%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SVLEKLSVN 86
+ G + + I+ NI + R+ + + ID + + + +L
Sbjct: 674 NSPGSLAEITQIISANDANIQNLSFIRTAPD---FTEIMIDLEVWDLKHLNRIFSQLKEA 730
Query: 87 VTIRFVKQFE 96
++ V++
Sbjct: 731 GSVSTVRRVH 740
>gi|153839225|ref|ZP_01991892.1| transcriptional regulatory protein TyrR [Vibrio parahaemolyticus
AQ3810]
gi|149747253|gb|EDM58241.1| transcriptional regulatory protein TyrR [Vibrio parahaemolyticus
AQ3810]
Length = 514
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + S + D + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEIDISGIIYLNCPDIDFDTF--SELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|113971943|ref|YP_735736.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella sp.
MR-4]
gi|113886627|gb|ABI40679.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella sp. MR-4]
Length = 700
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF---LCIDGSIL-NSVLE 81
+ + + G + + +I+ G NI + L + + + I +V+
Sbjct: 628 LRVEIVNHQGALAKITSIIAAEGSNIHN--LSTEERDGRVYLINLRISVKDRIHLANVMR 685
Query: 82 KLSVNVTIRF 91
++ V +
Sbjct: 686 RIRVLPEVLR 695
>gi|120600557|ref|YP_965131.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella sp.
W3-18-1]
gi|146294715|ref|YP_001185139.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella
putrefaciens CN-32]
gi|120560650|gb|ABM26577.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella sp. W3-18-1]
gi|145566405|gb|ABP77340.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella putrefaciens CN-32]
gi|319427950|gb|ADV56024.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella putrefaciens 200]
Length = 701
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF---LCIDGSIL-NSVLE 81
+ + + G + + +I+ G NI + L + + + I +V+
Sbjct: 629 LRVEIVNHQGALAKITSIIAAEGSNIHN--LSTEERDGRVYLINLRISVKDRIHLANVMR 686
Query: 82 KLSVNVTIRF 91
++ V +
Sbjct: 687 RIRVLPEVLR 696
>gi|328474781|gb|EGF45586.1| transcriptional regulator TyrR [Vibrio parahaemolyticus 10329]
Length = 514
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + S + D + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEIDISGIIYLNCPDIDFDTF--SELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|325124213|gb|ADY83736.1| homoserine dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
Length = 433
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
I + D G++ V IL GI+I I L I S ++ L
Sbjct: 351 GYYIRLNAEDQTGVLADVTTILSRAGISIDAIMQQSRLKDLIPIVILTDPIVESKMDDAL 410
Query: 81 EKLSVNVTIR 90
++ IR
Sbjct: 411 AQIQALPAIR 420
>gi|321265724|ref|XP_003197578.1| regulatory subunit of acetolactate synthase; Ilv6p [Cryptococcus
gattii WM276]
gi|317464058|gb|ADV25791.1| Regulatory subunit of acetolactate synthase, putative; Ilv6p,
putative [Cryptococcus gattii WM276]
Length = 357
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILN 77
R + + + G++ V IL G NI + +++ + + + + ++
Sbjct: 86 PFKRHRLNCLVQNEPGVLSRVSGILAGRGFNIDSLVVCQTEIRDLSRMCIILKGQDGVIE 145
Query: 78 SVLEKLSVN 86
+L
Sbjct: 146 QARRQLEDL 154
>gi|261380758|ref|ZP_05985331.1| homoserine dehydrogenase [Neisseria subflava NJ9703]
gi|284796478|gb|EFC51825.1| homoserine dehydrogenase [Neisseria subflava NJ9703]
Length = 435
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 28/80 (35%), Gaps = 1/80 (1%)
Query: 10 IKIQEI-NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+++Q I D + + D G + + +L + ++I + A
Sbjct: 338 VQVQNILPMDEITSSYYLRVQATDEPGTLGQIAALLAKENVSIEALIQKGVINQSTAEIV 397
Query: 69 LCIDGSILNSVLEKLSVNVT 88
+ ++ ++V ++
Sbjct: 398 ILTHTTVEHNVKRAIAAIEA 417
>gi|75907006|ref|YP_321302.1| homoserine dehydrogenase [Anabaena variabilis ATCC 29413]
gi|75700731|gb|ABA20407.1| homoserine dehydrogenase [Anabaena variabilis ATCC 29413]
Length = 429
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVN 86
D G++ +G G +G++I ++ + + + + L ++
Sbjct: 359 KDQAGVIGQLGTCFGNHGVSIESIV--QTGFQGELVEIVVVTHDVREGEFRQALAEIQNL 416
Query: 87 VTIRFV 92
I +
Sbjct: 417 PAIDSI 422
>gi|58262406|ref|XP_568613.1| acetolactate synthase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134118916|ref|XP_771961.1| hypothetical protein CNBN1410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254565|gb|EAL17314.1| hypothetical protein CNBN1410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230787|gb|AAW47096.1| acetolactate synthase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 357
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILN 77
R + + + G++ V IL G NI + +++ + + + + ++
Sbjct: 86 PFKRHRLNCLVQNEPGVLSRVSGILAGRGFNIDSLVVCQTEIRDLSRMCIILKGQDGVIE 145
Query: 78 SVLEKLSVN 86
+L
Sbjct: 146 QARRQLEDL 154
>gi|317498815|ref|ZP_07957102.1| homoserine dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316893878|gb|EFV16073.1| homoserine dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 428
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 9/66 (13%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + + LG+ ++IA + +++ + A + D + + + L +
Sbjct: 358 DDKPGVLARIADTLGKNQVSIA-QVIQKNKVNDMAELVVITDLVLEQNFADALVEIKGME 416
Query: 91 FVKQFE 96
++
Sbjct: 417 HTREIS 422
>gi|313903412|ref|ZP_07836803.1| aspartate kinase [Thermaerobacter subterraneus DSM 13965]
gi|313466233|gb|EFR61756.1| aspartate kinase [Thermaerobacter subterraneus DSM 13965]
Length = 404
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 32 DILGIVVFVGNILGEYGINIA--HFHLGRSQSTEHAISFLCIDGSILNSVLEKL-SVNVT 88
++ GI V + L E GIN+ + R+ + A + + VLE L
Sbjct: 271 NVPGIAHRVFSALAEAGINVDMISQSVARNGHQDIAFTIADGHLPVARRVLEPLVRELPA 330
>gi|259418754|ref|ZP_05742671.1| acetolactate synthase, small subunit [Silicibacter sp. TrichCH4B]
gi|259344976|gb|EEW56830.1| acetolactate synthase, small subunit [Silicibacter sp. TrichCH4B]
Length = 186
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R I ++ + G++ V + G NI + T H +S + + + V+E
Sbjct: 27 ERHTITVLVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGH-LSRITVVTTGTPQVIE 85
Query: 82 KLSV 85
++
Sbjct: 86 QIKA 89
>gi|260575452|ref|ZP_05843451.1| Homoserine dehydrogenase [Rhodobacter sp. SW2]
gi|259022372|gb|EEW25669.1| Homoserine dehydrogenase [Rhodobacter sp. SW2]
Length = 428
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 18/51 (35%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ +V D G + + LGE GI+I + + + +
Sbjct: 344 ATPAPWYLRMVLLDKPGALAKIATALGEAGISIDRMRQYGHEGAQAPVLIV 394
>gi|261378758|ref|ZP_05983331.1| homoserine dehydrogenase [Neisseria cinerea ATCC 14685]
gi|269144913|gb|EEZ71331.1| homoserine dehydrogenase [Neisseria cinerea ATCC 14685]
Length = 435
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 21/73 (28%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAKENVSIEALIQKGVIDQTTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVT 88
++ ++
Sbjct: 405 EKNIKRAIAAIEA 417
>gi|114045839|ref|YP_736389.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella sp.
MR-7]
gi|113887281|gb|ABI41332.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella sp. MR-7]
Length = 700
Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF---LCIDGSIL-NSVLE 81
+ + + G + + +I+ G NI + L + + + I +V+
Sbjct: 628 LRVEIVNHQGALAKITSIIAAEGSNIHN--LSTEERDGRVYLINLRISVKDRIHLANVMR 685
Query: 82 KLSVNVTIRF 91
++ V +
Sbjct: 686 RIRVLPEVLR 695
>gi|308068145|ref|YP_003869750.1| Acetolactate synthase small subunit [Paenibacillus polymyxa E681]
gi|305857424|gb|ADM69212.1| Acetolactate synthase small subunit [Paenibacillus polymyxa E681]
Length = 161
Score = 35.4 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ D G++ V + G G NI +G+S+ + + D + L + +
Sbjct: 5 NTIAVLVNDQPGVLQRVSGLFGRRGFNIESITVGQSEEVGLSRMVIVTVGDENNLEQIEK 64
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 65 QLYKLVDVIKV 75
>gi|312115447|ref|YP_004013043.1| aspartate kinase [Rhodomicrobium vannielii ATCC 17100]
gi|311220576|gb|ADP71944.1| aspartate kinase [Rhodomicrobium vannielii ATCC 17100]
Length = 418
Score = 35.4 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 22/74 (29%)
Query: 27 CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVN 86
+ D G+ + L E IN+ S+ + + L L+ L N
Sbjct: 278 VLSIEDKPGVAASIFVPLSEANINVDMIVQNISEDGRKTDLTFTVAAAELPRALQVLRDN 337
Query: 87 VTIRFVKQFEFNVD 100
+ + D
Sbjct: 338 QDTIRYRDLRGDTD 351
>gi|297568094|ref|YP_003689438.1| amino acid-binding ACT domain protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296924009|gb|ADH84819.1| amino acid-binding ACT domain protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 143
Score = 35.4 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
I I + G + + L ++GINI L + + D L++
Sbjct: 6 ITIFLENKSGRLADITATLAKHGINIRALSLADTADFGILRLVVS-DTDQAAKALKE 61
>gi|254449701|ref|ZP_05063138.1| homoserine dehydrogenase [Octadecabacter antarcticus 238]
gi|198264107|gb|EDY88377.1| homoserine dehydrogenase [Octadecabacter antarcticus 238]
Length = 429
Score = 35.4 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 26/74 (35%), Gaps = 2/74 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSIL 76
+ + D G + V +LG+ G++I T + + + + L
Sbjct: 344 AVPAPYYLRMQLVDKPGALAKVAAVLGDAGVSIDRMKQYGHADTSAPVLIVTHKVTRTAL 403
Query: 77 NSVLEKLSVNVTIR 90
+ LE ++ +
Sbjct: 404 DEALEAMTKTSVVL 417
>gi|163800712|ref|ZP_02194612.1| transcriptional regulator TyrR [Vibrio sp. AND4]
gi|159175061|gb|EDP59858.1| transcriptional regulator TyrR [Vibrio sp. AND4]
Length = 514
Score = 35.4 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + S + D + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEIDISGIIYLNCPDIDFDTF--SELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|304404318|ref|ZP_07385980.1| amino acid-binding ACT domain protein [Paenibacillus
curdlanolyticus YK9]
gi|304347296|gb|EFM13128.1| amino acid-binding ACT domain protein [Paenibacillus
curdlanolyticus YK9]
Length = 254
Score = 35.4 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Query: 29 VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
++ + G++ + ++LG +NI + ++ L D +L K+ +
Sbjct: 12 IHKNRPGLLGNIASLLGMMSVNILTINGVEDRTRG---MLLETDDDEKIDLLSKMLTKMD 68
Query: 89 IRFVKQFE 96
V +
Sbjct: 69 YITVNKLR 76
>gi|288800835|ref|ZP_06406292.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prevotella sp. oral taxon 299 str. F0039]
gi|288332296|gb|EFC70777.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prevotella sp. oral taxon 299 str. F0039]
Length = 753
Score = 35.4 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 30/88 (34%), Gaps = 9/88 (10%)
Query: 17 FDVDIGRL-------MICIVNADILGIVVFVGNILG-EYGINIAHFHLGRSQSTEHAISF 68
D I + D G+++ V ++ + I+I + +
Sbjct: 665 LDAKWNMHKRLFFTATIKVRGIDKHGMLLSVSEVISSQMNIDIHKITISTEEGIFDGTIE 724
Query: 69 LCI-DGSILNSVLEKLSVNVTIRFVKQF 95
+ + D +N ++ KL ++ V Q
Sbjct: 725 IGVHDKEEVNELITKLRNIENVKEVSQV 752
>gi|152998903|ref|YP_001364584.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella
baltica OS185]
gi|160873483|ref|YP_001552799.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella
baltica OS195]
gi|217971568|ref|YP_002356319.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella
baltica OS223]
gi|304411696|ref|ZP_07393308.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica OS183]
gi|307306252|ref|ZP_07585997.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica BA175]
gi|151363521|gb|ABS06521.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica OS185]
gi|160859005|gb|ABX47539.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica OS195]
gi|217496703|gb|ACK44896.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica OS223]
gi|304349884|gb|EFM14290.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica OS183]
gi|306911125|gb|EFN41552.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica BA175]
gi|315265712|gb|ADT92565.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella baltica OS678]
Length = 701
Score = 35.4 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF---LCIDGSIL-NSVLE 81
+ + + G + + +I+ G NI + L + + + I +V+
Sbjct: 629 LRVEIVNHQGALAKITSIIAAEGSNIHN--LSTEERDGRVYLINLRISVKDRIHLANVMR 686
Query: 82 KLSVNVTIRF 91
++ V +
Sbjct: 687 RIRVLPEVLR 696
>gi|28898643|ref|NP_798248.1| transcriptional regulator TyrR [Vibrio parahaemolyticus RIMD
2210633]
gi|260364922|ref|ZP_05777493.1| transcriptional regulatory protein TyrR [Vibrio parahaemolyticus
K5030]
gi|260879678|ref|ZP_05892033.1| transcriptional regulatory protein TyrR [Vibrio parahaemolyticus
AN-5034]
gi|260898849|ref|ZP_05907290.1| transcriptional regulatory protein TyrR [Vibrio parahaemolyticus
Peru-466]
gi|28806861|dbj|BAC60132.1| transcriptional regulator TyrR [Vibrio parahaemolyticus RIMD
2210633]
gi|308086699|gb|EFO36394.1| transcriptional regulatory protein TyrR [Vibrio parahaemolyticus
Peru-466]
gi|308093280|gb|EFO42975.1| transcriptional regulatory protein TyrR [Vibrio parahaemolyticus
AN-5034]
gi|308111492|gb|EFO49032.1| transcriptional regulatory protein TyrR [Vibrio parahaemolyticus
K5030]
Length = 514
Score = 35.4 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + S + D + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEIDISGIIYLNCPDIDFDTF--SELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|117922244|ref|YP_871436.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella sp.
ANA-3]
gi|117614576|gb|ABK50030.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella sp. ANA-3]
Length = 700
Score = 35.4 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF---LCIDGSIL-NSVLE 81
+ + + G + + +I+ G NI + L + + + I +V+
Sbjct: 628 LRVEIVNHQGALAKITSIIAAEGSNIHN--LSTEERDGRVYLINLRISVKDRIHLANVMR 685
Query: 82 KLSVNVTIRF 91
++ V +
Sbjct: 686 RIRVLPEVLR 695
>gi|307352561|ref|YP_003893612.1| amino acid-binding ACT domain-containing protein [Methanoplanus
petrolearius DSM 11571]
gi|307155794|gb|ADN35174.1| amino acid-binding ACT domain protein [Methanoplanus petrolearius
DSM 11571]
Length = 144
Score = 35.4 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 10/74 (13%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
I + + + G + + L + INI F +++ + L +D + L+KL+
Sbjct: 11 ISVFSENKPGRLAAIARALQDEKINI--FAFSIAEAKGFGVVRLLVDK--PEAALKKLAE 66
Query: 86 NV------TIRFVK 93
+ V+
Sbjct: 67 IGFMVSFTDVIAVR 80
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D G + + ILGE INI + + E A+ L +D + +EKL
Sbjct: 77 IAVRMKDEPGGLFDIARILGESEINIEYSYAY--SGKEAAVLILRVDRI--DEAIEKL 130
>gi|121726854|ref|ZP_01680066.1| transcriptional regulator TyrR [Vibrio cholerae V52]
gi|229505106|ref|ZP_04394616.1| transcriptional repressor protein TyrR [Vibrio cholerae BX
330286]
gi|229511224|ref|ZP_04400703.1| transcriptional repressor protein TyrR [Vibrio cholerae B33]
gi|229518342|ref|ZP_04407786.1| transcriptional repressor protein TyrR [Vibrio cholerae RC9]
gi|229521420|ref|ZP_04410839.1| transcriptional repressor protein TyrR [Vibrio cholerae TM
11079-80]
gi|229529610|ref|ZP_04419000.1| transcriptional repressor protein TyrR [Vibrio cholerae 12129(1)]
gi|229608110|ref|YP_002878758.1| transcriptional repressor protein TyrR [Vibrio cholerae MJ-1236]
gi|254848430|ref|ZP_05237780.1| transcriptional regulator TyrR [Vibrio cholerae MO10]
gi|255745704|ref|ZP_05419652.1| transcriptional repressor protein TyrR [Vibrio cholera CIRS 101]
gi|262159021|ref|ZP_06030133.1| transcriptional repressor protein TyrR [Vibrio cholerae INDRE
91/1]
gi|262169378|ref|ZP_06037070.1| transcriptional repressor protein TyrR [Vibrio cholerae RC27]
gi|298498602|ref|ZP_07008409.1| transcriptional regulator TyrR [Vibrio cholerae MAK 757]
gi|121630758|gb|EAX63143.1| transcriptional regulator TyrR [Vibrio cholerae V52]
gi|229333384|gb|EEN98870.1| transcriptional repressor protein TyrR [Vibrio cholerae 12129(1)]
gi|229341518|gb|EEO06521.1| transcriptional repressor protein TyrR [Vibrio cholerae TM
11079-80]
gi|229345057|gb|EEO10031.1| transcriptional repressor protein TyrR [Vibrio cholerae RC9]
gi|229351189|gb|EEO16130.1| transcriptional repressor protein TyrR [Vibrio cholerae B33]
gi|229357329|gb|EEO22246.1| transcriptional repressor protein TyrR [Vibrio cholerae BX
330286]
gi|229370765|gb|ACQ61188.1| transcriptional repressor protein TyrR [Vibrio cholerae MJ-1236]
gi|254844135|gb|EET22549.1| transcriptional regulator TyrR [Vibrio cholerae MO10]
gi|255736779|gb|EET92176.1| transcriptional repressor protein TyrR [Vibrio cholera CIRS 101]
gi|262022191|gb|EEY40900.1| transcriptional repressor protein TyrR [Vibrio cholerae RC27]
gi|262029206|gb|EEY47858.1| transcriptional repressor protein TyrR [Vibrio cholerae INDRE
91/1]
gi|297542935|gb|EFH78985.1| transcriptional regulator TyrR [Vibrio cholerae MAK 757]
Length = 537
Score = 35.4 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + ++ ID + ++ ++ ++
Sbjct: 32 EDRLGLTRELLDILASKSIDLRGIEI--DVIGIIYLNCPDIDFETFSELMAEIRRIPGVK 89
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 90 DVRKIQF 96
>gi|213691862|ref|YP_002322448.1| (p)ppGpp synthetase I, SpoT/RelA [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213523323|gb|ACJ52070.1| (p)ppGpp synthetase I, SpoT/RelA [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320457957|dbj|BAJ68578.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. infantis ATCC
15697]
Length = 774
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LNS+L + +
Sbjct: 694 DRRNLLSDVTRVLSDHGVNIISGTIATGSDRVATSQFSFEMADPQHLNSLLAAVRKIDGV 753
Query: 90 RFV 92
V
Sbjct: 754 FDV 756
>gi|108803779|ref|YP_643716.1| CBS domain-containing protein [Rubrobacter xylanophilus DSM 9941]
gi|108765022|gb|ABG03904.1| CBS domain containing membrane protein [Rubrobacter xylanophilus
DSM 9941]
Length = 232
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 7/53 (13%), Positives = 25/53 (47%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
D G++ + + + + +NIA + + + + + ++ + ++E+L
Sbjct: 158 DRPGMLAAIADTVRDRRVNIASVFVAPAMRASNRLIGMRLETTNPAGIVEELR 210
>gi|99080715|ref|YP_612869.1| acetolactate synthase 3 regulatory subunit [Ruegeria sp. TM1040]
gi|99036995|gb|ABF63607.1| acetolactate synthase, small subunit [Ruegeria sp. TM1040]
Length = 186
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R I ++ + G++ V + G NI + T H +S + + + V+E
Sbjct: 27 ERHTITVLVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGH-LSRITVVTTGTPQVIE 85
Query: 82 KLSV 85
++
Sbjct: 86 QIKA 89
>gi|170079297|ref|YP_001735935.1| acetolactate synthase 3 regulatory subunit [Synechococcus sp. PCC
7002]
gi|169886966|gb|ACB00680.1| acetolactate synthase, small subunit [Synechococcus sp. PCC 7002]
Length = 172
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + D + V
Sbjct: 3 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEKEGISRITMVVPCDEKEIEQVSA 62
Query: 82 KLSVNVTIRFV 92
+L + +R V
Sbjct: 63 QLDKLIHVREV 73
>gi|189424918|ref|YP_001952095.1| amino acid-binding ACT domain protein [Geobacter lovleyi SZ]
gi|189421177|gb|ACD95575.1| amino acid-binding ACT domain protein [Geobacter lovleyi SZ]
Length = 143
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
I I + G + + ILGE GINI L + + + +VL++
Sbjct: 6 ISIFIENKSGRLAEITRILGEAGINIRALSLADTSDFGILRLIVN-EVEKAKAVLKE 61
>gi|83954145|ref|ZP_00962865.1| homoserine dehydrogenase [Sulfitobacter sp. NAS-14.1]
gi|83841182|gb|EAP80352.1| homoserine dehydrogenase [Sulfitobacter sp. NAS-14.1]
Length = 428
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK-LSVNVTI 89
D G + V +LGE GI+I +++ L + + L++ L+
Sbjct: 357 DKPGALAKVATVLGEAGISIDRMR--QTEHRSDQAPVLIVTHKCSRTALDEALAAMEKT 413
>gi|317482439|ref|ZP_07941456.1| RelA/SpoT family protein [Bifidobacterium sp. 12_1_47BFAA]
gi|316916099|gb|EFV37504.1| RelA/SpoT family protein [Bifidobacterium sp. 12_1_47BFAA]
Length = 774
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LNS+L + +
Sbjct: 694 DRRNLLSDVTRVLSDHGVNIISGTIATGSDRVATSQFSFEMADPQHLNSLLAAVRKIDGV 753
Query: 90 RFV 92
V
Sbjct: 754 FDV 756
>gi|265765392|ref|ZP_06093667.1| GTP pyrophosphokinase [Bacteroides sp. 2_1_16]
gi|263254776|gb|EEZ26210.1| GTP pyrophosphokinase [Bacteroides sp. 2_1_16]
gi|301161778|emb|CBW21318.1| putative RelA/SpoT GTP pyrophosphokinase [Bacteroides fragilis
638R]
Length = 747
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEY-GINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKL 83
I I D +G++ + ++ +NI + L + D + ++ L
Sbjct: 674 IYIKGIDNVGLLNEITQVISRQLNVNIRKLDMETDDGIFEGKVQLYVHDVEDVKAICNNL 733
Query: 84 SVNVTIRFVKQFE 96
I+ V + E
Sbjct: 734 RKIPNIKSVTRVE 746
>gi|218290232|ref|ZP_03494386.1| acetolactate synthase, small subunit [Alicyclobacillus
acidocaldarius LAA1]
gi|218239707|gb|EED06898.1| acetolactate synthase, small subunit [Alicyclobacillus
acidocaldarius LAA1]
Length = 176
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL---CIDGSILNSVLEKLSVNV 87
+ G++ + + G NI + +++ E + + +D + L V+++L +
Sbjct: 10 HNKPGVLNRITALFMRKGFNIQSLTVCITENPEISRMTIVMSDMDEAALEQVIKQLHKQI 69
Query: 88 TIRFVKQFE 96
+ V
Sbjct: 70 DVLKVTDLT 78
>gi|53712057|ref|YP_098049.1| GTP pyrophosphokinase [Bacteroides fragilis YCH46]
gi|253563904|ref|ZP_04841361.1| GTP pyrophosphokinase [Bacteroides sp. 3_2_5]
gi|52214922|dbj|BAD47515.1| GTP pyrophosphokinase [Bacteroides fragilis YCH46]
gi|251947680|gb|EES87962.1| GTP pyrophosphokinase [Bacteroides sp. 3_2_5]
Length = 747
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEY-GINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKL 83
I I D +G++ + ++ +NI + L + D + ++ L
Sbjct: 674 IYIKGIDNVGLLNEITQVISRQLNVNIRKLDMETDDGIFEGKVQLYVHDVEDVKAICNNL 733
Query: 84 SVNVTIRFVKQFE 96
I+ V + E
Sbjct: 734 RKIPNIKSVTRVE 746
>gi|296454301|ref|YP_003661444.1| (p)ppGpp synthetase I [Bifidobacterium longum subsp. longum JDM301]
gi|296183732|gb|ADH00614.1| (p)ppGpp synthetase I, SpoT/RelA [Bifidobacterium longum subsp.
longum JDM301]
Length = 781
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LNS+L + +
Sbjct: 701 DRRNLLSDVTRVLSDHGVNIISGTIATGSDRVATSQFSFEMADPQHLNSLLAAVRKIDGV 760
Query: 90 RFV 92
V
Sbjct: 761 FDV 763
>gi|209965266|ref|YP_002298181.1| acetolactate synthase, small subunit [Rhodospirillum centenum SW]
gi|209958732|gb|ACI99368.1| acetolactate synthase, small subunit [Rhodospirillum centenum SW]
Length = 171
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 32/87 (36%), Gaps = 5/87 (5%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
+ I R I ++ + G++ V + G NI + + E +S + I S
Sbjct: 3 PVEQHIERHTISVLVDNEPGVLARVIGLFSGRGYNIESLTVA-EVNAEQQLSRITIVTSG 61
Query: 76 LNSVLEKLSV----NVTIRFVKQFEFN 98
++E++ V + V+
Sbjct: 62 TPMIIEQIKAQLDRLVPVHRVRDLTLE 88
>gi|169832345|ref|YP_001718327.1| CBS domain-containing protein [Candidatus Desulforudis audaxviator
MP104C]
gi|169639189|gb|ACA60695.1| CBS domain containing protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 221
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ I D +G++ + E GINI R + + + +++
Sbjct: 150 AGTRLVIDTEDRVGVLADITQFFKERGINIISVVTMRRDE-KRFHLVFRVSIADAGALVA 208
Query: 82 KLSVN 86
++
Sbjct: 209 EIEGL 213
>gi|153831829|ref|ZP_01984496.1| transcriptional regulatory protein TyrR [Vibrio harveyi HY01]
gi|148871827|gb|EDL70650.1| transcriptional regulatory protein TyrR [Vibrio harveyi HY01]
Length = 514
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + S + D + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEIDISGIIYLNCPDIDFDTF--SELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|126466358|ref|YP_001041467.1| hypothetical protein Smar_1470 [Staphylothermus marinus F1]
gi|126015181|gb|ABN70559.1| hypothetical protein Smar_1470 [Staphylothermus marinus F1]
Length = 299
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL---CIDGSILNSVLE 81
++ + + GI+ V I+ G NI ++ ++ + D S + +
Sbjct: 40 LLLLKAINKPGIIFKVTEIIAGKGKNIIKLNVPDIAFGDYGFVLILIDNCDESCGEDLKK 99
Query: 82 KL 83
++
Sbjct: 100 EI 101
>gi|50122770|ref|YP_051937.1| acetolactate synthase 1 regulatory subunit [Pectobacterium
atrosepticum SCRI1043]
gi|49613296|emb|CAG76747.1| acetolactate synthase isozyme I small subunit [Pectobacterium
atrosepticum SCRI1043]
Length = 97
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKLSVNVTI 89
+ G++ V + N+ + E + +L + D L ++ ++ +
Sbjct: 17 RNHPGVMSHVCGLFARRAFNVEGILCMPLANGEESRIWLLVKDDQRLQQMISQVEKLEDV 76
Query: 90 RFVK 93
V+
Sbjct: 77 LQVR 80
>gi|84515914|ref|ZP_01003275.1| PII uridylyl-transferase [Loktanella vestfoldensis SKA53]
gi|84510356|gb|EAQ06812.1| PII uridylyl-transferase [Loktanella vestfoldensis SKA53]
Length = 930
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 24/87 (27%), Gaps = 9/87 (10%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG--- 73
D D C D G+ + L G NI +A + +
Sbjct: 734 LDADRDATRACFAMVDHPGLFSRMTGALALVGANIVDARTYT-SKDGYATAVFWVQDGDG 792
Query: 74 -SILNSVLEKLSVNVTIRFVKQFEFNV 99
S L++L + V+ V
Sbjct: 793 NPYEESRLQRLRQMI----VRTLRGEV 815
>gi|227547677|ref|ZP_03977726.1| GTP diphosphokinase [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|227211932|gb|EEI79828.1| GTP diphosphokinase [Bifidobacterium longum subsp. infantis ATCC
55813]
Length = 784
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LNS+L + +
Sbjct: 704 DRRNLLSDVTRVLSDHGVNIISGTIATGSDRVATSQFSFEMADPQHLNSLLAAVRKIDGV 763
Query: 90 RFV 92
V
Sbjct: 764 FDV 766
>gi|227114226|ref|ZP_03827882.1| acetolactate synthase 1 regulatory subunit [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 82
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 8/65 (12%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 30 NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKLSVNVT 88
+ G++ V + N+ + E + +L + D L ++ ++
Sbjct: 1 MRNHPGVMSHVCGLFARRAFNVEGILCMPLANGEESRIWLLVKDDQRLQQMISQVEKLED 60
Query: 89 IRFVK 93
+ V+
Sbjct: 61 VLQVR 65
>gi|224283374|ref|ZP_03646696.1| GTP pyrophosphokinase [Bifidobacterium bifidum NCIMB 41171]
gi|313140527|ref|ZP_07802720.1| RelA [Bifidobacterium bifidum NCIMB 41171]
gi|313133037|gb|EFR50654.1| RelA [Bifidobacterium bifidum NCIMB 41171]
Length = 776
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
I + D ++ V +L ++G+NI G + SF D LN +L
Sbjct: 689 RIQVEALDRQHLLSDVTRVLADHGVNILSGSQATGSDRVAISQFSFEMADPQHLNRLLAA 748
Query: 83 LSVNVTIRFV 92
+ + V
Sbjct: 749 VRKIDGVFDV 758
>gi|261418324|ref|YP_003252006.1| acetolactate synthase 3 regulatory subunit [Geobacillus sp.
Y412MC61]
gi|297529176|ref|YP_003670451.1| acetolactate synthase, small subunit [Geobacillus sp. C56-T3]
gi|319767717|ref|YP_004133218.1| acetolactate synthase, small subunit [Geobacillus sp. Y412MC52]
gi|261374781|gb|ACX77524.1| acetolactate synthase, small subunit [Geobacillus sp. Y412MC61]
gi|297252428|gb|ADI25874.1| acetolactate synthase, small subunit [Geobacillus sp. C56-T3]
gi|317112583|gb|ADU95075.1| acetolactate synthase, small subunit [Geobacillus sp. Y412MC52]
Length = 172
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
+I + + G++ + + + NI +G ++ + + D +++
Sbjct: 4 IITMTVNNRPGVLNRITGLFTKRHYNIESITVGHTEIEGVSRMTFVVNVDDERTAEQIIK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V
Sbjct: 64 QLNKQIDVLKVNDIT 78
>gi|189439171|ref|YP_001954252.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Bifidobacterium longum DJO10A]
gi|322689387|ref|YP_004209121.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. infantis 157F]
gi|322691353|ref|YP_004220923.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. longum JCM
1217]
gi|189427606|gb|ACD97754.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Bifidobacterium longum DJO10A]
gi|320456209|dbj|BAJ66831.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. longum JCM
1217]
gi|320460723|dbj|BAJ71343.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. infantis 157F]
Length = 774
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LNS+L + +
Sbjct: 694 DRRNLLSDVTRVLSDHGVNIISGTIATGSDRVATSQFSFEMADPQHLNSLLAAVRKIDGV 753
Query: 90 RFV 92
V
Sbjct: 754 FDV 756
>gi|156974204|ref|YP_001445111.1| hypothetical protein VIBHAR_01919 [Vibrio harveyi ATCC BAA-1116]
gi|156525798|gb|ABU70884.1| hypothetical protein VIBHAR_01919 [Vibrio harveyi ATCC BAA-1116]
Length = 514
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + S + D + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEIDISGIIYLNCPDIDFDTF--SELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|152995282|ref|YP_001340117.1| (p)ppGpp synthetase I SpoT/RelA [Marinomonas sp. MWYL1]
gi|150836206|gb|ABR70182.1| (p)ppGpp synthetase I, SpoT/RelA [Marinomonas sp. MWYL1]
Length = 749
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 35/95 (36%), Gaps = 17/95 (17%)
Query: 8 RFIKI-------QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
R I + + ++ + D G++ + ++L +N+ + ++
Sbjct: 656 RIIDVSWGEELDNQYPVNIQVEAY-------DRTGLLNDITSLLANEKVNLLSMNTLSAK 708
Query: 61 STEHAISFLCIDG---SILNSVLEKLSVNVTIRFV 92
A I+ S+L+ +L +++ + V
Sbjct: 709 ENHTASIRFTIEVGELSVLSKLLHRINQLPNVLNV 743
>gi|23465997|ref|NP_696600.1| RelA [Bifidobacterium longum NCC2705]
gi|23326714|gb|AAN25236.1| RelA [Bifidobacterium longum NCC2705]
Length = 781
Score = 35.4 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LNS+L + +
Sbjct: 701 DRRNLLSDVTRVLSDHGVNIISGTIATGSDRVATSQFSFEMADPQHLNSLLAAVRKIDGV 760
Query: 90 RFV 92
V
Sbjct: 761 FDV 763
>gi|269967895|ref|ZP_06181936.1| transcriptional regulator TyrR [Vibrio alginolyticus 40B]
gi|269827493|gb|EEZ81786.1| transcriptional regulator TyrR [Vibrio alginolyticus 40B]
Length = 514
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + S + D + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEIDISGIIYLNCPDIDFDTF--SELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|60680251|ref|YP_210395.1| putative RelA/SpoT GTP pyrophosphokinase [Bacteroides fragilis NCTC
9343]
gi|60491685|emb|CAH06437.1| putative RelA/SpoT GTP pyrophosphokinase [Bacteroides fragilis NCTC
9343]
Length = 747
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEY-GINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKL 83
I I D +G++ + ++ +NI + L + D + ++ L
Sbjct: 674 IYIKGIDNVGLLNEITQVISRQLNVNIRKLDMETDDGIFEGKVQLYVHDVEDVKAICNNL 733
Query: 84 SVNVTIRFVKQFE 96
I+ V + E
Sbjct: 734 RKIPNIKSVTRVE 746
>gi|83942969|ref|ZP_00955429.1| homoserine dehydrogenase [Sulfitobacter sp. EE-36]
gi|83845977|gb|EAP83854.1| homoserine dehydrogenase [Sulfitobacter sp. EE-36]
Length = 428
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
D G + V +LGE GI+I +++ L + + L++
Sbjct: 357 DKPGALAKVATVLGEAGISIDRMR--QTEHRSDQAPVLIVTHKCSRTALDE 405
>gi|311064614|ref|YP_003971339.1| GTP pyrophosphokinase/Guanosine-3',5'-bis(Diphosphate),
3'-pyrophosphohydrolase RelA [Bifidobacterium bifidum
PRL2010]
gi|310866933|gb|ADP36302.1| RelA GTP pyrophosphokinase/Guanosine-3',5'-bis(Diphosphate),
3'-pyrophosphohydrolase [Bifidobacterium bifidum
PRL2010]
Length = 776
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
I + D ++ V +L ++G+NI G + SF D LN +L
Sbjct: 689 RIQVEALDRQHLLSDVTRVLADHGVNILSGSQATGSDRVAISQFSFEMADPQHLNRLLAA 748
Query: 83 LSVNVTIRFV 92
+ + V
Sbjct: 749 VRKIDGVFDV 758
>gi|310287726|ref|YP_003938984.1| GTP pyrophosphokinase [Bifidobacterium bifidum S17]
gi|309251662|gb|ADO53410.1| GTP pyrophosphokinase [Bifidobacterium bifidum S17]
Length = 776
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
I + D ++ V +L ++G+NI G + SF D LN +L
Sbjct: 689 RIQVEALDRQHLLSDVTRVLADHGVNILSGSQATGSDRVAISQFSFEMADPQHLNRLLAA 748
Query: 83 LSVNVTIRFV 92
+ + V
Sbjct: 749 VRKIDGVFDV 758
>gi|296877411|ref|ZP_06901448.1| acetolactate synthase [Streptococcus parasanguinis ATCC 15912]
gi|322390966|ref|ZP_08064472.1| acetolactate synthase small subunit [Streptococcus parasanguinis
ATCC 903]
gi|296431572|gb|EFH17382.1| acetolactate synthase [Streptococcus parasanguinis ATCC 15912]
gi|321142341|gb|EFX37813.1| acetolactate synthase small subunit [Streptococcus parasanguinis
ATCC 903]
Length = 158
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G +++ + + ID + + V + +
Sbjct: 4 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGATENPNVSRITIIIDVASHDEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ V+
Sbjct: 64 QLNRQVDVIRVRDIT 78
>gi|239623421|ref|ZP_04666452.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522387|gb|EEQ62253.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 147
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI--DGSILNSVLE 81
+ + D G++ + +++ Y NI H + ++ + + D ++S+++
Sbjct: 71 TLVVQMDDEQGLLSDLLHVVAVYRANILTIHQSIPVNGVATLTLSVEVRDDTGNVSSMID 130
Query: 82 KLSVNVTIRFVKQF 95
+L I +VK
Sbjct: 131 ELEELEGIHYVKIL 144
>gi|91224283|ref|ZP_01259545.1| transcriptional regulator TyrR [Vibrio alginolyticus 12G01]
gi|91190625|gb|EAS76892.1| transcriptional regulator TyrR [Vibrio alginolyticus 12G01]
Length = 514
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + S + D + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEIDISGIIYLNCPDIDFDTF--SELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|83311352|ref|YP_421616.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Magnetospirillum magneticum AMB-1]
gi|82946193|dbj|BAE51057.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Magnetospirillum magneticum AMB-1]
Length = 721
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEKLSVNVTI 89
+ G + ++ + NI + + + + + + D L +V+ L I
Sbjct: 654 NEPGAFGAISTVIAKNMGNITNLKITNRTTDFFEMLIDIEVRDVKHLTNVIAALRATPAI 713
Query: 90 RFV 92
V
Sbjct: 714 NSV 716
>gi|254228149|ref|ZP_04921578.1| transcriptional regulatory protein TyrR [Vibrio sp. Ex25]
gi|262393936|ref|YP_003285790.1| transcriptional repressor protein TyrR [Vibrio sp. Ex25]
gi|151939222|gb|EDN58051.1| transcriptional regulatory protein TyrR [Vibrio sp. Ex25]
gi|262337530|gb|ACY51325.1| transcriptional repressor protein TyrR [Vibrio sp. Ex25]
Length = 514
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + S + D + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEIDISGIIYLNCPDIDFDTF--SELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|323495985|ref|ZP_08101049.1| acetolactate synthase 3 regulatory subunit [Vibrio sinaloensis
DSM 21326]
gi|323318947|gb|EGA71894.1| acetolactate synthase 3 regulatory subunit [Vibrio sinaloensis
DSM 21326]
Length = 164
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + G + V + + G NI + + + + D L + +
Sbjct: 3 HIISLLMENQPGALSRVVGLFSQRGYNIESLTVSPTDDETLSRLNITTISDEMKLEQIQK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V++
Sbjct: 63 QLNKLIDVLKVQEVS 77
>gi|242045456|ref|XP_002460599.1| hypothetical protein SORBIDRAFT_02g031600 [Sorghum bicolor]
gi|241923976|gb|EER97120.1| hypothetical protein SORBIDRAFT_02g031600 [Sorghum bicolor]
Length = 594
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I D ++ + ++LGE G+NI H S + +++ + G + +
Sbjct: 198 HEITFSTIDKPKLLSELTSLLGELGLNIQEAHAF-STNDGYSLDVFVVVGWHDEETEDLV 256
Query: 84 SVN 86
Sbjct: 257 EAV 259
>gi|239621288|ref|ZP_04664319.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|239515749|gb|EEQ55616.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|291516765|emb|CBK70381.1| (p)ppGpp synthetase, RelA/SpoT family [Bifidobacterium longum
subsp. longum F8]
Length = 784
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LNS+L + +
Sbjct: 704 DRRNLLSDVTRVLSDHGVNIISGTIATGSDRVATSQFSFEMADPQHLNSLLAAVRKIDGV 763
Query: 90 RFV 92
V
Sbjct: 764 FDV 766
>gi|293331679|ref|NP_001168730.1| hypothetical protein LOC100382522 [Zea mays]
gi|223950455|gb|ACN29311.1| unknown [Zea mays]
Length = 593
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I D ++ + ++LGE G+NI H S + +++ + G + +
Sbjct: 197 HEITFSTIDKPKLLSELTSLLGELGLNIQEAHAF-STNDGYSLDVFVVVGWHDEETEDLV 255
Query: 84 SVN 86
Sbjct: 256 EAV 258
>gi|226505358|ref|NP_001151481.1| ATP binding protein [Zea mays]
gi|195647108|gb|ACG43022.1| ATP binding protein [Zea mays]
Length = 634
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I D ++ + ++LGE G+NI H S + +++ + G + +
Sbjct: 198 HEITFSTIDKPKLLSELTSLLGELGLNIQEAHAF-STNDGYSLDVFVVVGWHDEETEDLV 256
Query: 84 SVN 86
Sbjct: 257 EAV 259
>gi|126657041|ref|ZP_01728212.1| acetolactate synthase small subunit [Cyanothece sp. CCY0110]
gi|126621584|gb|EAZ92294.1| acetolactate synthase small subunit [Cyanothece sp. CCY0110]
Length = 181
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + + D + + + +
Sbjct: 11 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQSGISRITMVVPGDDNTIEQLTK 70
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V
Sbjct: 71 QLYKLINVLKVNNIT 85
>gi|254481768|ref|ZP_05095011.1| Homoserine dehydrogenase, NAD binding domain family [marine gamma
proteobacterium HTCC2148]
gi|214037897|gb|EEB78561.1| Homoserine dehydrogenase, NAD binding domain family [marine gamma
proteobacterium HTCC2148]
Length = 437
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 29/87 (33%), Gaps = 8/87 (9%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
+ + + I+ D G++ + +I ++GI++ E + + +
Sbjct: 346 PMEQVVTPWYLRIIAEDKPGVLSSIASIFSDHGISMEALIQKPPAEGETRVPLIVLTSRA 405
Query: 76 LN-------SVLEKLSVNVT-IRFVKQ 94
+ +E L + ++
Sbjct: 406 SQGSMDVAVATIEALESISGEVARIRV 432
>gi|149374702|ref|ZP_01892476.1| GTP pyrophosphokinase [Marinobacter algicola DG893]
gi|149361405|gb|EDM49855.1| GTP pyrophosphokinase [Marinobacter algicola DG893]
Length = 745
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 33/93 (35%), Gaps = 14/93 (15%)
Query: 4 DGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
G+P + DV+I D G++ + +L ++ + ++
Sbjct: 660 GGQPVAV----YPVDVEIEAY-------DRSGLLRDITQVLSSSKSDVLALNTLSNKDEN 708
Query: 64 HAISFLCID-GSILN--SVLEKLSVNVTIRFVK 93
A + ++ S+ +L ++ I V+
Sbjct: 709 TATMTVTLEISSLDQLAKLLAQIRNLPNIINVR 741
>gi|223933365|ref|ZP_03625352.1| acetolactate synthase, small subunit [Streptococcus suis 89/1591]
gi|223897932|gb|EEF64306.1| acetolactate synthase, small subunit [Streptococcus suis 89/1591]
Length = 158
Score = 35.4 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID---GSILNSVLEKLSVNV 87
+ G++ +L INI +G ++ + + +D + ++++L+ +
Sbjct: 10 RNSSGVLNRFTGVLSRRQINIESISVGPTEVDGISRVTVIVDVVSHDEVEQIIKQLNRLI 69
Query: 88 TIRFVKQFE 96
+ V+
Sbjct: 70 DVVRVRDLT 78
>gi|313837532|gb|EFS75246.1| acetolactate synthase, small subunit [Propionibacterium acnes
HL037PA2]
gi|314927260|gb|EFS91091.1| acetolactate synthase, small subunit [Propionibacterium acnes
HL044PA1]
gi|314972738|gb|EFT16835.1| acetolactate synthase, small subunit [Propionibacterium acnes
HL037PA3]
gi|328907857|gb|EGG27620.1| acetolactate synthase 3 regulatory subunit [Propionibacterium sp.
P08]
Length = 168
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 8/73 (10%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
++ ++ + G++ V + G NI + + + + + + LE++
Sbjct: 4 HVLSVLVTNRPGVLTRVSGLFARRGYNIESLTVSPTDDPSESRMTIGV-NVVSAQALEQI 62
Query: 84 -SVNVTIRFVKQF 95
+ V +
Sbjct: 63 VKQLNKLIEVHKI 75
>gi|297622867|ref|YP_003704301.1| formyltetrahydrofolate deformylase [Truepera radiovictrix DSM
17093]
gi|297164047|gb|ADI13758.1| formyltetrahydrofolate deformylase [Truepera radiovictrix DSM
17093]
Length = 286
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 13/46 (28%), Gaps = 1/46 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFL 69
+ I D GIV V L +G NI +
Sbjct: 8 RLLISCPDRPGIVAAVSQFLYAHGANILDAQQHSTDPKGGEFFMRM 53
>gi|269962911|ref|ZP_06177250.1| transcriptional regulator TyrR [Vibrio harveyi 1DA3]
gi|269832356|gb|EEZ86476.1| transcriptional regulator TyrR [Vibrio harveyi 1DA3]
Length = 514
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + S + D + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEIDISGIIYLNCPDIDFDTF--SELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|297568705|ref|YP_003690049.1| acetolactate synthase, small subunit [Desulfurivibrio
alkaliphilus AHT2]
gi|296924620|gb|ADH85430.1| acetolactate synthase, small subunit [Desulfurivibrio
alkaliphilus AHT2]
Length = 160
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ + G++ V + G NI + + + + L D +I+ + +
Sbjct: 3 HTISVLLQNKPGVLSRVTGLFSGRGFNIDSLSVAETLEKDVSCLTLVTHGDEAIIEQITK 62
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 63 QLHKLIDVIKV 73
>gi|218513810|ref|ZP_03510650.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase protein
[Rhizobium etli 8C-3]
Length = 124
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + V + +NI + R + + L + D LN +L
Sbjct: 50 RIMVNGLNEPGTLAKVAQTVASLDVNIRLLNTVRVAA-DFTEMMLEVEVWDLRQLNQLLA 108
Query: 82 KLSVNVTIRFVKQF 95
++ I V++
Sbjct: 109 QMKELDCIATVRRL 122
>gi|317124963|ref|YP_004099075.1| prephenate dehydrogenase [Intrasporangium calvum DSM 43043]
gi|315589051|gb|ADU48348.1| prephenate dehydrogenase [Intrasporangium calvum DSM 43043]
Length = 362
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 24/55 (43%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVN 86
D+ G + + +G+ GIN+ HL ++++ + + + E L+
Sbjct: 302 DVPGSLARLLTDMGDAGINLEDMHLEHGLGQPFGVAYISVVPASAEPLAETLTGL 356
>gi|257064877|ref|YP_003144549.1| (p)ppGpp synthetase, RelA/SpoT family [Slackia heliotrinireducens
DSM 20476]
gi|256792530|gb|ACV23200.1| (p)ppGpp synthetase, RelA/SpoT family [Slackia heliotrinireducens
DSM 20476]
Length = 789
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 8/96 (8%)
Query: 4 DGKPRFIKIQEINFDVDIGRLM----ICIVNADILGIVVFVGNILGEYGINIAHFHLGRS 59
+ R I++ D + I D L ++ + N L + G+N+
Sbjct: 685 KDRGRIIEVN--WADSVPSETSYQVEVYIEAMDRLNLLRDIINALSDTGVNVISSSTSSH 742
Query: 60 QSTEHAISFLCIDGSIL--NSVLEKLSVNVTIRFVK 93
+ +L + +L L + +
Sbjct: 743 SDGIVEMRYLFQVSQVSNIERILADLRSIDGVFEAR 778
>gi|218191142|gb|EEC73569.1| hypothetical protein OsI_08011 [Oryza sativa Indica Group]
Length = 554
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL---CIDGSILNSVL 80
+ I+ D G++ V + G NI +G ++ + + D SI ++
Sbjct: 385 HTLSILVNDCPGVLNIVTGVFARRGYNIQSLAVGPAEKSGLSRITTVAPGTDESI-EKLV 443
Query: 81 EKLSVNVTIRFVKQFE 96
++L V + V+
Sbjct: 444 QQLYKLVDVHEVQDIT 459
>gi|256832595|ref|YP_003161322.1| (p)ppGpp synthetase I, SpoT/RelA [Jonesia denitrificans DSM 20603]
gi|256686126|gb|ACV09019.1| (p)ppGpp synthetase I, SpoT/RelA [Jonesia denitrificans DSM 20603]
Length = 804
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 14/93 (15%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQST 62
R + + + G + +V D ++ V +L + +NI + S
Sbjct: 712 RIV-----DVEWTTGSNAMFLVQIQVEALDRPRLLSDVTRVLSDSHVNILSASVTTSTDR 766
Query: 63 EHAISFLCIDGSILN---SVLEKLSVNVTIRFV 92
AIS + + +VL + + V
Sbjct: 767 -VAISKFTFEMAEPAHLTTVLNAVRRIDGVFDV 798
>gi|85705254|ref|ZP_01036353.1| acetolactate synthase small subunit [Roseovarius sp. 217]
gi|85670127|gb|EAQ24989.1| acetolactate synthase small subunit [Roseovarius sp. 217]
Length = 186
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ ++ + G++ V + G NI + T H + V+E
Sbjct: 27 ETHTLAVLVDNEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGHTSRITIVTTGTPQ-VIE 85
Query: 82 KLSV 85
++
Sbjct: 86 QIKA 89
>gi|118580092|ref|YP_901342.1| amino acid-binding ACT domain-containing protein [Pelobacter
propionicus DSM 2379]
gi|118502802|gb|ABK99284.1| ACT domain protein [Pelobacter propionicus DSM 2379]
Length = 143
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
I I + G + + ILG+ GINI L + + D + L++
Sbjct: 6 ISIFIENKSGRLAEITRILGDEGINIRALSLADTSDFGILRLIVN-DAGRAKAALKE 61
>gi|328954196|ref|YP_004371530.1| acetolactate synthase, small subunit [Desulfobacca acetoxidans
DSM 11109]
gi|328454520|gb|AEB10349.1| acetolactate synthase, small subunit [Desulfobacca acetoxidans
DSM 11109]
Length = 160
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA-ISFLCIDGS-ILNSVLE 81
I ++ + G++ V + G NI + + + + I+ + + I+ +++
Sbjct: 3 HTISVLVDNEPGVLSRVTGLFSGRGFNIESLCVAATMEADVSRITLVSVGSEMIIEQIIK 62
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 63 QLRKLINVIKV 73
>gi|310640935|ref|YP_003945693.1| acetolactate synthase, small subunit [Paenibacillus polymyxa SC2]
gi|309245885|gb|ADO55452.1| Acetolactate synthase, small subunit [Paenibacillus polymyxa SC2]
Length = 161
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ D G++ V + G G NI +G+S+ + + D + L + +
Sbjct: 5 NTIAVLVNDHPGVLQRVSGLFGRRGFNIESITVGQSEEVGLSRMVIVTVGDENNLEQIEK 64
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 65 QLYKLVDVIKV 75
>gi|260768997|ref|ZP_05877931.1| formyltetrahydrofolate deformylase [Vibrio furnissii CIP 102972]
gi|260617027|gb|EEX42212.1| formyltetrahydrofolate deformylase [Vibrio furnissii CIP 102972]
gi|315180693|gb|ADT87607.1| formyltetrahydrofolate deformylase [Vibrio furnissii NCTC 11218]
Length = 277
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 24/60 (40%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + + D G++ + NI ++ +NI H ++ H ++G + L
Sbjct: 1 MEKKTLLTHCTDAPGLIAKITNICYKHQLNIIHNSEYVDNTSGHFFMRTELEGYFNDETL 60
>gi|227484948|ref|ZP_03915264.1| GTP diphosphokinase [Anaerococcus lactolyticus ATCC 51172]
gi|227237103|gb|EEI87118.1| GTP diphosphokinase [Anaerococcus lactolyticus ATCC 51172]
Length = 726
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG-SILNSVLEKLSVN 86
I++A+ I+ V ++ + +NI + + + + L++V++KL
Sbjct: 656 IISANGPSILFEVSKMMSTFDVNILSINARTDSDSGIMDLVIEVSSTEQLDNVIKKLKTI 715
Query: 87 VTIRFV 92
T+ V
Sbjct: 716 KTVSDV 721
>gi|167766828|ref|ZP_02438881.1| hypothetical protein CLOSS21_01336 [Clostridium sp. SS2/1]
gi|167711582|gb|EDS22161.1| hypothetical protein CLOSS21_01336 [Clostridium sp. SS2/1]
gi|291560596|emb|CBL39396.1| homoserine dehydrogenase [butyrate-producing bacterium SSC/2]
Length = 428
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/66 (13%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + + LG+ ++IA + +++ + A + D + + + L +
Sbjct: 358 DDKPGVLARIADTLGKNEVSIA-QVIQKNKVNDMAELVVITDLVLEQNFADALVEIKGME 416
Query: 91 FVKQFE 96
++
Sbjct: 417 HTREIS 422
>gi|120866627|emb|CAM10378.1| putative homoserine dehydrogenase [Neisseria meningitidis FAM18]
Length = 488
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 398 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 457
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 458 EKHIKSAIAAIEA 470
>gi|84393676|ref|ZP_00992426.1| acetolactate synthase III small subunit [Vibrio splendidus 12B01]
gi|86148104|ref|ZP_01066404.1| acetolactate synthase III, small subunit [Vibrio sp. MED222]
gi|218708427|ref|YP_002416048.1| acetolactate synthase 3 regulatory subunit [Vibrio splendidus
LGP32]
gi|84375675|gb|EAP92572.1| acetolactate synthase III small subunit [Vibrio splendidus 12B01]
gi|85834091|gb|EAQ52249.1| acetolactate synthase III, small subunit [Vibrio sp. MED222]
gi|218321446|emb|CAV17398.1| Acetolactate synthase isozyme III small subunit [Vibrio
splendidus LGP32]
Length = 164
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
++ ++ + G + V + + G NI ++ + + +S L + + LE++
Sbjct: 3 HILSLLMENQPGALSRVVGLFSQRGYNIESLNVSPTD--DPTLSRLNVTTNSSEMQLEQI 60
Query: 84 S----VNVTIRFVKQFE 96
+ + V++
Sbjct: 61 QKQLHKLIDVLKVQEVS 77
>gi|300780015|ref|ZP_07089871.1| aspartate kinase [Corynebacterium genitalium ATCC 33030]
gi|300534125|gb|EFK55184.1| aspartate kinase [Corynebacterium genitalium ATCC 33030]
Length = 421
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 6/62 (9%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGR-----SQSTEHAISFLCIDGSILNSVLEKLSVN 86
D+ G + +L + INI L T+ + DG L +L+
Sbjct: 274 DVPGEAAKLFRVLADAEINI-DMVLQNPSSLHDNITDITFTLPKADGPRGLEALRELAQT 332
Query: 87 VT 88
Sbjct: 333 EG 334
>gi|315231289|ref|YP_004071725.1| hypothetical protein TERMP_01527 [Thermococcus barophilus MP]
gi|315184317|gb|ADT84502.1| hypothetical protein TERMP_01527 [Thermococcus barophilus MP]
Length = 197
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 37 VVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
+ V IL E G++I R+ E + +++ IDG++ V K+ +
Sbjct: 108 ISSVLQILSENGVSIMEIF-SRNLRQEESKAYIVIDGTLPVEVFVKIKDIPGFKK 161
>gi|163747052|ref|ZP_02154408.1| acetolactate synthase 3 small subunit [Oceanibulbus indolifex
HEL-45]
gi|161379613|gb|EDQ04026.1| acetolactate synthase 3 small subunit [Oceanibulbus indolifex
HEL-45]
Length = 186
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ + ++ + G + V + G NI + T H +S + I S V+E
Sbjct: 27 EKHTLAVLVENEPGALARVIGLFSGRGYNIDSLTVAEVDHTGH-LSRITIVTSGTPQVIE 85
Query: 82 KLSV 85
++
Sbjct: 86 QIKA 89
>gi|55792536|gb|AAV65364.1| plastid acetolactate synthase small subunit [Prototheca
wickerhamii]
Length = 192
Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 8/87 (9%)
Query: 14 EINF---DVDI-----GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ + + + + + D G++ V + G NI +G +Q
Sbjct: 76 GYDVYVYEAEPLEEGVSKHTLNVFVGDEAGMINRVAGVFARRGANIESLAVGLTQDKALF 135
Query: 66 ISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ + ++ ++L+ V +R+V
Sbjct: 136 TIVATGTDATVANLCKQLAKLVNVRYV 162
>gi|251781862|ref|YP_002996164.1| hypothetical protein SDEG_0448 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390491|dbj|BAH80950.1| hypothetical protein SDEG_0448 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 220
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 6/60 (10%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
F+++ + + + ++ + +G++ + + L + +NI + + + I
Sbjct: 130 FLEVSGYGVE----GIRVVLLADNAVGVLAKIADCLSQENLNIRRTVVANRSNGKTVIEM 185
>gi|119897326|ref|YP_932539.1| acetolactate synthase 1 regulatory subunit [Azoarcus sp. BH72]
gi|119669739|emb|CAL93652.1| acetolactate synthase [Azoarcus sp. BH72]
Length = 104
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS-FLCIDGSILNSVLEKLSVNVTI 89
+ G++ + N+ N+ + + L + L +L +L +
Sbjct: 24 RNHPGVMSHICNLFARRAFNVEGILCMPVSDGKKSRIWLLVFEDQRLEQMLRQLEKLEDV 83
Query: 90 RFVK 93
V+
Sbjct: 84 LAVR 87
>gi|187478653|ref|YP_786677.1| homoserine dehydrogenase [Bordetella avium 197N]
gi|115423239|emb|CAJ49772.1| homoserine dehydrogenase [Bordetella avium 197N]
Length = 434
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + IL + I+I S I FL ++ +V + ++ ++
Sbjct: 361 DDRPGVLADIARILADRAISIGSMIQEPSNVGGADIIFL-THEALEGNVNQAIASIESLP 419
Query: 91 FVK 93
FV+
Sbjct: 420 FVR 422
>gi|94264324|ref|ZP_01288117.1| Acetolactate synthase, small subunit [delta proteobacterium
MLMS-1]
gi|93455290|gb|EAT05500.1| Acetolactate synthase, small subunit [delta proteobacterium
MLMS-1]
Length = 160
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ + G++ V + G NI + + + + L D +I+ + +
Sbjct: 3 HTISVLLQNKPGVLSRVTGLFSGRGFNIDSLSVAETLEKDVSCLTLVTHGDEAIIEQITK 62
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 63 QLHKLIDVIKV 73
>gi|297617182|ref|YP_003702341.1| MgtC/SapB transporter [Syntrophothermus lipocalidus DSM 12680]
gi|297145019|gb|ADI01776.1| MgtC/SapB transporter [Syntrophothermus lipocalidus DSM 12680]
Length = 220
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSV 79
+V D G V +G++LG+ + I + L R + + L + V
Sbjct: 144 EYKGFLVVVDDKPGQVGRIGSVLGDMNVLIKNIQLERVEEEGLEVELLLQLPPNVTPDQV 203
Query: 80 LEKLSVNVTIRFVKQFE 96
+ L R V++
Sbjct: 204 ADALQNAPGCREVERLN 220
>gi|219683441|ref|YP_002469824.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis
AD011]
gi|219621091|gb|ACL29248.1| probable GTP pyrophosphokinase [Bifidobacterium animalis subsp.
lactis AD011]
Length = 777
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G NI G + SF D LN++L + +
Sbjct: 693 DRPHLLSDVTRVLSDHGANILSGTIATGSDRVATSQFSFEMADPGHLNTLLSAVRKIDGV 752
Query: 90 RFV 92
V
Sbjct: 753 FDV 755
>gi|210615400|ref|ZP_03290527.1| hypothetical protein CLONEX_02743 [Clostridium nexile DSM 1787]
gi|210150249|gb|EEA81258.1| hypothetical protein CLONEX_02743 [Clostridium nexile DSM 1787]
Length = 146
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS----FLCIDGSILNSVL 80
+ + D G++ + + EYG NI H + ++ L G+I + ++
Sbjct: 70 TLVVQMDDTPGLLAEILRDVAEYGANILTIHQSIPLNGVATLTLSVEILSTTGNISD-MV 128
Query: 81 EKLSVNVTIRFVKQF 95
++ N + ++K
Sbjct: 129 AEIEENQGVHYLKIV 143
>gi|261406062|ref|YP_003242303.1| prephenate dehydrogenase [Paenibacillus sp. Y412MC10]
gi|261282525|gb|ACX64496.1| Prephenate dehydrogenase [Paenibacillus sp. Y412MC10]
Length = 364
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 23/58 (39%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D GI+ + LG IN+++ + S+ + L I ++L
Sbjct: 297 LYLDVPDHPGIIGRIATELGTNSINLSNMQIIESREDVPGVMRLSFRNEIEQERAKEL 354
>gi|125718759|ref|YP_001035892.1| acetolactate synthase 3 regulatory subunit [Streptococcus
sanguinis SK36]
gi|125498676|gb|ABN45342.1| Acetolactate synthase small subunit, putative [Streptococcus
sanguinis SK36]
gi|324989908|gb|EGC21850.1| acetolactate synthase small subunit [Streptococcus sanguinis
SK353]
gi|324992360|gb|EGC24281.1| acetolactate synthase small subunit [Streptococcus sanguinis
SK405]
gi|324996117|gb|EGC28028.1| acetolactate synthase small subunit [Streptococcus sanguinis
SK678]
gi|325695635|gb|EGD37535.1| acetolactate synthase small subunit [Streptococcus sanguinis
SK150]
gi|327460589|gb|EGF06924.1| acetolactate synthase small subunit [Streptococcus sanguinis SK1]
gi|327468266|gb|EGF13751.1| acetolactate synthase small subunit [Streptococcus sanguinis
SK330]
gi|327488946|gb|EGF20743.1| acetolactate synthase small subunit [Streptococcus sanguinis
SK1058]
Length = 158
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G +++ E + + ID + L V + +
Sbjct: 4 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGTTENPEVSRITIIIDVASLAEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ V+
Sbjct: 64 QLNRQIDVIRVRDIT 78
>gi|116748021|ref|YP_844708.1| UTP-GlnB uridylyltransferase GlnD [Syntrophobacter fumaroxidans
MPOB]
gi|116697085|gb|ABK16273.1| UTP-GlnB uridylyltransferase, GlnD [Syntrophobacter fumaroxidans
MPOB]
Length = 864
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
+ + +V AD G+ + +L G+NI + +S A+ L ++
Sbjct: 672 PAEGEMWQLTVVTADRPGLFALITGVLWARGLNILSADIFTWESG-VALDVLIVERLPDP 730
>gi|297578891|ref|ZP_06940819.1| transcriptional regulator TyrR [Vibrio cholerae RC385]
gi|297536485|gb|EFH75318.1| transcriptional regulator TyrR [Vibrio cholerae RC385]
Length = 527
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + ++ ID + ++ ++ ++
Sbjct: 22 EDRLGLTRELLDILASKSIDLRGIEI--DVIGIIYLNCPDIDFETFSELMAEIRRIPGVK 79
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 80 DVRKIQF 86
>gi|296130345|ref|YP_003637595.1| formyltetrahydrofolate deformylase [Cellulomonas flavigena DSM
20109]
gi|296022160|gb|ADG75396.1| formyltetrahydrofolate deformylase [Cellulomonas flavigena DSM
20109]
Length = 288
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 23/65 (35%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
VD L++ + D GIV V +L ++G NI + + +
Sbjct: 6 PVDPTHLVLTLSCPDRPGIVAAVAGLLAQHGGNITESQQFGDPLSGLFFMRVQVTTDAGA 65
Query: 78 SVLEK 82
L +
Sbjct: 66 DALRE 70
>gi|163731958|ref|ZP_02139405.1| homoserine dehydrogenase [Roseobacter litoralis Och 149]
gi|161395412|gb|EDQ19734.1| homoserine dehydrogenase [Roseobacter litoralis Och 149]
Length = 428
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 7/37 (18%), Positives = 14/37 (37%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFH 55
+ + D G + + +LGE G++I
Sbjct: 344 ALPASYYLRMSLHDKPGALAKIATVLGEAGVSIDRMR 380
>gi|71083748|ref|YP_266468.1| GTP pyrophosphokinase [Candidatus Pelagibacter ubique HTCC1062]
gi|91763216|ref|ZP_01265180.1| GTP pyrophosphokinase [Candidatus Pelagibacter ubique HTCC1002]
gi|71062861|gb|AAZ21864.1| GTP pyrophosphokinase [Candidatus Pelagibacter ubique HTCC1062]
gi|91717629|gb|EAS84280.1| GTP pyrophosphokinase [Candidatus Pelagibacter ubique HTCC1002]
Length = 581
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 7/39 (17%), Positives = 14/39 (35%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ I D G + + LG + +NI+ +
Sbjct: 490 TTLWISLPDQPGKLGEITTSLGSHKLNISSVEMKEKTKD 528
>gi|312873707|ref|ZP_07733752.1| alanine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
gi|325911933|ref|ZP_08174336.1| alanine--tRNA ligase [Lactobacillus iners UPII 143-D]
gi|311090705|gb|EFQ49104.1| alanine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
gi|325476235|gb|EGC79398.1| alanine--tRNA ligase [Lactobacillus iners UPII 143-D]
Length = 877
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 1 VFSDG---KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVG-NILGEYGINIAHFHL 56
+F + K R ++I + + + G N D +G++ V + +G A
Sbjct: 648 LFGEKYHEKVRVVQINDFSIEFCGGTH---CENTDQIGMLKIVSESAIG------AGMRR 698
Query: 57 GRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
+ + + A + IL + +++
Sbjct: 699 IVAVTGQQAYEYAVKHDEILKEIQDEVKATK 729
>gi|309805990|ref|ZP_07700016.1| alanine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
gi|312872876|ref|ZP_07732938.1| alanine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
gi|325913725|ref|ZP_08176086.1| alanine--tRNA ligase [Lactobacillus iners UPII 60-B]
gi|308167593|gb|EFO69746.1| alanine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
gi|311091610|gb|EFQ49992.1| alanine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
gi|325476925|gb|EGC80076.1| alanine--tRNA ligase [Lactobacillus iners UPII 60-B]
Length = 877
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 1 VFSDG---KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVG-NILGEYGINIAHFHL 56
+F + K R ++I + + + G N D +G++ V + +G A
Sbjct: 648 LFGEKYHEKVRVVQINDFSIEFCGGTH---CENTDQIGMLKIVSESAIG------AGMRR 698
Query: 57 GRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
+ + + A + IL + +++
Sbjct: 699 IVAVTGQQAYEYAVKHDEILKEIQDEVKATK 729
>gi|302670456|ref|YP_003830416.1| prephenate dehydrogenase TyrA [Butyrivibrio proteoclasticus B316]
gi|302394929|gb|ADL33834.1| prephenate dehydrogenase TyrA [Butyrivibrio proteoclasticus B316]
Length = 391
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 20/50 (40%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
++ + D G + V +L ++ +NI + + ++ E +
Sbjct: 316 PKTYVLHVEINDQPGRLAAVAVLLSDHNVNIKNIGIVHNREYERGTLRIE 365
>gi|288927457|ref|ZP_06421304.1| GTP diphosphokinase [Prevotella sp. oral taxon 317 str. F0108]
gi|288330291|gb|EFC68875.1| GTP diphosphokinase [Prevotella sp. oral taxon 317 str. F0108]
Length = 757
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 11/89 (12%)
Query: 17 FDVDIGRL-------MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
D I I D G++ V ++ +NI L S +
Sbjct: 669 LDAKWDMHGKMFFEATIEIRGIDRHGLLRDVAEVISSQ-LNIDMRKLVISGDEGVFDGTI 727
Query: 70 CI---DGSILNSVLEKLSVNVTIRFVKQF 95
+ D + +++KL I V++
Sbjct: 728 ELRVHDRNETQQIIDKLKDIDGIHEVQRI 756
>gi|262369858|ref|ZP_06063185.1| GTP pyrophosphokinase [Acinetobacter johnsonii SH046]
gi|262314897|gb|EEY95937.1| GTP pyrophosphokinase [Acinetobacter johnsonii SH046]
Length = 768
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKL 83
I + D G++ + ++ INI + + L + +L +L
Sbjct: 693 IVVEAYDRRGLLKDLTQVIFSDQINIRQVNTISEADGIANMKLLIEVKGLSQLSKLLARL 752
Query: 84 SVNVTIRFVKQF 95
I ++
Sbjct: 753 EQQPGIISARRL 764
>gi|257386823|ref|YP_003176596.1| aspartate kinase [Halomicrobium mukohataei DSM 12286]
gi|257169130|gb|ACV46889.1| aspartate kinase [Halomicrobium mukohataei DSM 12286]
Length = 392
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 9/72 (12%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQ--------STEHAISFLCIDGSILNSVLEK 82
+ GI+ + LG+ GINI G + A + L D + + L
Sbjct: 266 RNSPGILGELSTALGDEGINIDGVSSGMDSITFYVDTDHADDAEALLH-DHVVDDDTLSS 324
Query: 83 LSVNVTIRFVKQ 94
++V I V+
Sbjct: 325 VTVEDDIAVVRV 336
>gi|153827224|ref|ZP_01979891.1| transcriptional regulator TyrR [Vibrio cholerae MZO-2]
gi|149738874|gb|EDM53206.1| transcriptional regulator TyrR [Vibrio cholerae MZO-2]
Length = 513
Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + ++ ID + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEI--DVIGIIYLNCPDIDFETFSELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|238924360|ref|YP_002937876.1| acetolactate synthase 3 regulatory subunit [Eubacterium rectale
ATCC 33656]
gi|238876035|gb|ACR75742.1| acetolactate synthase 3 regulatory subunit [Eubacterium rectale
ATCC 33656]
gi|291525134|emb|CBK90721.1| acetolactate synthase, small subunit [Eubacterium rectale DSM
17629]
gi|291529377|emb|CBK94963.1| acetolactate synthase, small subunit [Eubacterium rectale M104/1]
Length = 166
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVT 88
+ G+ + + G NI F G + + + D +L + ++L+
Sbjct: 11 ENNPGVTSRISGLFSRRGFNIDSFSSGVTADPRYTRITIVASGDEQVLEQIEKQLAKLED 70
Query: 89 IRFVKQFE 96
+ +K+ E
Sbjct: 71 VLDIKKLE 78
>gi|256372700|ref|YP_003110524.1| Malate dehydrogenase (oxaloacetate- decarboxylating)
[Acidimicrobium ferrooxidans DSM 10331]
gi|256009284|gb|ACU54851.1| Malate dehydrogenase (oxaloacetate- decarboxylating)
[Acidimicrobium ferrooxidans DSM 10331]
Length = 470
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 3/66 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLEKLSVNVTI 89
+ G + + +GE G NI L + I+ L D + E +
Sbjct: 18 NQPGTLGRLTTAIGEAGGNILGVDLVEVDAATIVRDITVLSGDPEHAERIREAAEGVPGV 77
Query: 90 RFVKQF 95
V+
Sbjct: 78 H-VRSL 82
>gi|15641320|ref|NP_230952.1| transcriptional regulator TyrR [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121586542|ref|ZP_01676328.1| transcriptional regulator TyrR [Vibrio cholerae 2740-80]
gi|147674299|ref|YP_001216872.1| transcriptional regulator TyrR [Vibrio cholerae O395]
gi|153216968|ref|ZP_01950732.1| transcriptional regulator TyrR [Vibrio cholerae 1587]
gi|153802659|ref|ZP_01957245.1| transcriptional regulator TyrR [Vibrio cholerae MZO-3]
gi|153819274|ref|ZP_01971941.1| transcriptional regulator TyrR [Vibrio cholerae NCTC 8457]
gi|153822916|ref|ZP_01975583.1| transcriptional regulator TyrR [Vibrio cholerae B33]
gi|153830043|ref|ZP_01982710.1| transcriptional regulator TyrR [Vibrio cholerae 623-39]
gi|227081479|ref|YP_002810030.1| transcriptional regulator TyrR [Vibrio cholerae M66-2]
gi|254226877|ref|ZP_04920446.1| transcriptional regulator TyrR [Vibrio cholerae V51]
gi|254286595|ref|ZP_04961551.1| transcriptional regulator TyrR [Vibrio cholerae AM-19226]
gi|262190940|ref|ZP_06049154.1| transcriptional repressor protein TyrR [Vibrio cholerae CT
5369-93]
gi|9655796|gb|AAF94466.1| transcriptional regulator TyrR [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549221|gb|EAX59253.1| transcriptional regulator TyrR [Vibrio cholerae 2740-80]
gi|124114000|gb|EAY32820.1| transcriptional regulator TyrR [Vibrio cholerae 1587]
gi|124121787|gb|EAY40530.1| transcriptional regulator TyrR [Vibrio cholerae MZO-3]
gi|125620594|gb|EAZ48959.1| transcriptional regulator TyrR [Vibrio cholerae V51]
gi|126510177|gb|EAZ72771.1| transcriptional regulator TyrR [Vibrio cholerae NCTC 8457]
gi|126519568|gb|EAZ76791.1| transcriptional regulator TyrR [Vibrio cholerae B33]
gi|146316182|gb|ABQ20721.1| transcriptional regulator TyrR [Vibrio cholerae O395]
gi|148874483|gb|EDL72618.1| transcriptional regulator TyrR [Vibrio cholerae 623-39]
gi|150423353|gb|EDN15298.1| transcriptional regulator TyrR [Vibrio cholerae AM-19226]
gi|227009367|gb|ACP05579.1| transcriptional regulator TyrR [Vibrio cholerae M66-2]
gi|227013225|gb|ACP09435.1| transcriptional regulator TyrR [Vibrio cholerae O395]
gi|262033177|gb|EEY51701.1| transcriptional repressor protein TyrR [Vibrio cholerae CT
5369-93]
Length = 513
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + ++ ID + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEI--DVIGIIYLNCPDIDFETFSELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|312132602|ref|YP_003999941.1| spot [Bifidobacterium longum subsp. longum BBMN68]
gi|311773548|gb|ADQ03036.1| SpoT [Bifidobacterium longum subsp. longum BBMN68]
Length = 774
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LNS+L + +
Sbjct: 694 DRRNLLSDVTRVLSDHGVNIISGTIATGSDRVATSQFSFEMADPQHLNSLLAAVRKIDGV 753
Query: 90 RFV 92
V
Sbjct: 754 FDV 756
>gi|302190972|ref|ZP_07267226.1| alanyl-tRNA synthetase [Lactobacillus iners AB-1]
Length = 877
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 1 VFSDG---KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVG-NILGEYGINIAHFHL 56
+F + K R ++I + + + G N D +G++ V + +G A
Sbjct: 648 LFGEKYHEKVRVVQINDFSIEFCGGTH---CENTDQIGMLKIVSESAIG------AGMRR 698
Query: 57 GRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
+ + + A + IL + +++
Sbjct: 699 IVAVTGQQAYEYAVKHDEILKEIQDEVKATK 729
>gi|294857846|ref|ZP_06795615.1| homoserine dehydrogenase [Acinetobacter sp. 6013150]
Length = 381
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
I + D G++ V IL GI+I I L I S ++ L
Sbjct: 299 GYYIRLNAEDQTGVLADVTTILSRAGISIDAIMQQSRLKDLIPIVILTDPIVESKMDDAL 358
Query: 81 EKLSVNVTIR 90
++ IR
Sbjct: 359 AQIQALPAIR 368
>gi|327483993|gb|AEA78400.1| Transcriptional repressor protein TyrR [Vibrio cholerae
LMA3894-4]
Length = 513
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + ++ ID + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEI--DVIGIIYLNCPDIDFETFSELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|327400341|ref|YP_004341180.1| prephenate dehydratase [Archaeoglobus veneficus SNP6]
gi|327315849|gb|AEA46465.1| prephenate dehydratase [Archaeoglobus veneficus SNP6]
Length = 620
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST-EHAISFLCIDGSIL 76
++ + D G + V + GIN+ +++ + F+ ++ +
Sbjct: 531 EMRGSITSLFFGVEDRPGALKDVLEVFYRKGINMRKLESRPARTGLGDYVFFVEVEKDLS 590
Query: 77 NSVLEKLSVN 86
+ L +L
Sbjct: 591 SEDLRELRNV 600
>gi|318061406|ref|ZP_07980127.1| prephenate dehydrogenase [Streptomyces sp. SA3_actG]
Length = 364
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 25/82 (30%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
++ + I ++ +D G + + G G+NI + + + + L
Sbjct: 283 RVPGKHGSTPAAYETIAVLISDRPGELARIFADAGRAGVNIEDVRIEHATGQQAGLVQLS 342
Query: 71 IDGSILNSVLEKLSVNVTIRFV 92
+ + + L
Sbjct: 343 VAPEAASGLAAALRERGWSLRA 364
>gi|309803595|ref|ZP_07697687.1| alanine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
gi|309809661|ref|ZP_07703517.1| alanine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
gi|312875207|ref|ZP_07735220.1| alanine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
gi|308164343|gb|EFO66598.1| alanine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
gi|308170021|gb|EFO72058.1| alanine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
gi|311089314|gb|EFQ47745.1| alanine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
Length = 877
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 1 VFSDG---KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVG-NILGEYGINIAHFHL 56
+F + K R ++I + + + G N D +G++ V + +G A
Sbjct: 648 LFGEKYHEKVRVVQINDFSIEFCGGTH---CENTDQIGMLKIVSESAIG------AGMRR 698
Query: 57 GRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
+ + + A + IL + +++
Sbjct: 699 IVAVTGQQAYEYAVKHDEILKEIQDEVKATK 729
>gi|306843274|ref|ZP_07475883.1| acetolactate synthase, small subunit [Brucella sp. BO2]
gi|306286540|gb|EFM58123.1| acetolactate synthase, small subunit [Brucella sp. BO2]
Length = 190
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ ++ + G++ V + G NI + E +S + I VL
Sbjct: 21 PETHTLAVLVDNEPGVLARVIGLFSGRGYNIESLTVS-ETEHERHLSRITIVTRGTPHVL 79
Query: 81 EKLS 84
+++
Sbjct: 80 DQIR 83
>gi|301061590|ref|ZP_07202349.1| ACT domain protein [delta proteobacterium NaphS2]
gi|300444309|gb|EFK08315.1| ACT domain protein [delta proteobacterium NaphS2]
Length = 165
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ FD+ +I + + G + + LGE GINI + + + A+
Sbjct: 93 KGYLFDILP---VIALEIENRPGSLAEMARKLGEEGININYVYGSTLGGSGRALFVF 146
Score = 33.9 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
++ G + + +L E GINI + +
Sbjct: 11 ENVPGELAKLTAVLEERGINIDAMTIQDASE 41
>gi|284108790|ref|ZP_06386455.1| Homoserine dehydrogenase [Candidatus Poribacteria sp. WGA-A3]
gi|283829864|gb|EFC34155.1| Homoserine dehydrogenase [Candidatus Poribacteria sp. WGA-A3]
Length = 438
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 20/57 (35%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
D G++ + +LG + I+IA Q + + + SV +
Sbjct: 363 DQPGVLSRIAGVLGHHAISIASVLQQGRQEGQTVPVVIMTHRASERSVQTAIREINH 419
>gi|152981008|ref|YP_001353750.1| protein-PII uridylyltransferas [Janthinobacterium sp. Marseille]
gi|151281085|gb|ABR89495.1| protein-pII uridylyltransferas [Janthinobacterium sp. Marseille]
Length = 850
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 27/80 (33%), Gaps = 12/80 (15%)
Query: 17 FDVDIG----RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC-- 70
D+ ++ I D G++ V NIL +Y +N+ + + +
Sbjct: 770 VDLRPDERGRYYLLTISANDRNGLLYSVANILAKYKVNLHTAKVMTLGERVEDVFLVDGQ 829
Query: 71 -IDGSILN-----SVLEKLS 84
+D +L+ L
Sbjct: 830 MLDNPRSQIQLETDLLDALR 849
>gi|37678680|ref|NP_933289.1| acetolactate synthase 3 regulatory subunit [Vibrio vulnificus
YJ016]
gi|229220646|ref|NP_759632.2| acetolactate synthase 3 regulatory subunit [Vibrio vulnificus
CMCP6]
gi|320157488|ref|YP_004189867.1| acetolactate synthase small subunit [Vibrio vulnificus MO6-24/O]
gi|37197420|dbj|BAC93260.1| acetolactate synthase, small subunit [Vibrio vulnificus YJ016]
gi|319932800|gb|ADV87664.1| acetolactate synthase small subunit [Vibrio vulnificus MO6-24/O]
gi|319999107|gb|AAO09159.2| acetolactate synthase, small subunit [Vibrio vulnificus CMCP6]
Length = 164
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLE 81
+I ++ + G + V + + G NI + + + + D L + +
Sbjct: 3 HIISLLMENQPGALSRVVGLFSQRGYNIESLTVSPTDDETLSRLNITTMTDEMQLEQIQK 62
Query: 82 KLSVNVTIRFVKQF-EFN 98
+L + + V++ EF+
Sbjct: 63 QLHKLIDVLKVQEVTEFD 80
>gi|329929754|ref|ZP_08283430.1| prephenate dehydrogenase [Paenibacillus sp. HGF5]
gi|328935732|gb|EGG32193.1| prephenate dehydrogenase [Paenibacillus sp. HGF5]
Length = 364
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 23/58 (39%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D GI+ + LG IN+++ + S+ + L I ++L
Sbjct: 297 LYLDVPDHPGIIGRIATELGTNSINLSNMQIIESREDVPGVMRLSFRNEIEQERAKEL 354
>gi|262376985|ref|ZP_06070211.1| homoserine dehydrogenase [Acinetobacter lwoffii SH145]
gi|262308023|gb|EEY89160.1| homoserine dehydrogenase [Acinetobacter lwoffii SH145]
Length = 439
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLC--IDGSILNSV 79
I I D +G++ V IL GI+I R I L I S +++
Sbjct: 356 GYYIRINAEDQMGVLADVTTILSRAGISIDAIMQQPRLSKDLIPIVILTDPIVESKMDAA 415
Query: 80 LEKLSVNV----TIRFVKQFEFN 98
L ++ I ++ +
Sbjct: 416 LSQIQALPVIHGEIVRIRLESLD 438
>gi|168036608|ref|XP_001770798.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677857|gb|EDQ64322.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
D +++ + +L + G+NI H+ S + +++ +DG
Sbjct: 169 DKPKLLMQMSALLADVGLNIREAHVF-STTDGYSLDVFVVDGWPSEDT 215
>gi|94970134|ref|YP_592182.1| acetolactate synthase, small subunit [Candidatus Koribacter
versatilis Ellin345]
gi|94552184|gb|ABF42108.1| acetolactate synthase, small subunit [Candidatus Koribacter
versatilis Ellin345]
Length = 181
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 7/53 (13%), Positives = 21/53 (39%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL 76
+ + + G++ V ++ NI +GR++ + + + +D
Sbjct: 3 HVFVVHVENKPGVLTRVASLFRRRAFNIDSLTVGRTEKADVSRMTIVVDTDKD 55
>gi|33865214|ref|NP_896773.1| acetolactate synthase 3 regulatory subunit [Synechococcus sp. WH
8102]
gi|33638898|emb|CAE07195.1| Acetolactate synthase small subunit [Synechococcus sp. WH 8102]
Length = 176
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G +++ + + D L + +
Sbjct: 3 HTLSVLVEDESGALSRIAGLFARRGFNIDSLAVGPAEADRQSRLTMVVEGDDQTLQQMTK 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLDKLVNVLQV 73
>gi|120599554|ref|YP_964128.1| PII uridylyl-transferase [Shewanella sp. W3-18-1]
gi|120559647|gb|ABM25574.1| metal dependent phosphohydrolase [Shewanella sp. W3-18-1]
gi|319425751|gb|ADV53825.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella putrefaciens 200]
Length = 860
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 6/73 (8%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSV 79
G + + D + V +L IN+ A+ + L DG
Sbjct: 673 GGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKDNYALDTFVILEQDGEP---- 728
Query: 80 LEKLSVNVTIRFV 92
+ +LS +IR
Sbjct: 729 VSQLSRIQSIRKA 741
>gi|323485946|ref|ZP_08091279.1| hypothetical protein HMPREF9474_03030 [Clostridium symbiosum
WAL-14163]
gi|323693057|ref|ZP_08107277.1| hypothetical protein HMPREF9475_02140 [Clostridium symbiosum
WAL-14673]
gi|323400736|gb|EGA93101.1| hypothetical protein HMPREF9474_03030 [Clostridium symbiosum
WAL-14163]
gi|323502938|gb|EGB18780.1| hypothetical protein HMPREF9475_02140 [Clostridium symbiosum
WAL-14673]
Length = 761
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEKLS 84
I + +G+ V + + E I+I ++ R+ A + D + + +KL
Sbjct: 690 IFANNRIGMFVDISKVFTERQIDITSMNV-RTSKQGKATIMMAFDIHGIEELNKLTDKLR 748
Query: 85 VNVTIRFV 92
+ +
Sbjct: 749 QIEGVLDI 756
>gi|322387241|ref|ZP_08060851.1| acetolactate synthase small subunit [Streptococcus infantis ATCC
700779]
gi|321141770|gb|EFX37265.1| acetolactate synthase small subunit [Streptococcus infantis ATCC
700779]
Length = 158
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G +++ + + ID + + V + +
Sbjct: 4 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGATENPNVSRITIIIDVASHDEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ V+
Sbjct: 64 QLNRQVDVIRVRDIT 78
>gi|312870710|ref|ZP_07730817.1| alanine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
gi|311093722|gb|EFQ52059.1| alanine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
Length = 877
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 1 VFSDG---KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVG-NILGEYGINIAHFHL 56
+F + K R ++I + + + G N D +G++ V + +G A
Sbjct: 648 LFGEKYHEKVRVVQINDFSIEFCGGTH---CENTDQIGMLKIVSESAIG------AGMRR 698
Query: 57 GRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
+ + + A + IL + +++
Sbjct: 699 IVAVTGQQAYEYAVKHDEILKEIQDEVKATK 729
>gi|83955491|ref|ZP_00964122.1| acetolactate synthase small subunit [Sulfitobacter sp. NAS-14.1]
gi|83840135|gb|EAP79310.1| acetolactate synthase small subunit [Sulfitobacter sp. NAS-14.1]
Length = 186
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + ++ + G++ V + G NI + T H +S + I S V+E
Sbjct: 27 ERHTLAVLVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGH-LSRITIVTSGTPQVIE 85
Query: 82 KLSV 85
++
Sbjct: 86 QIKA 89
>gi|146292449|ref|YP_001182873.1| PII uridylyl-transferase [Shewanella putrefaciens CN-32]
gi|145564139|gb|ABP75074.1| metal dependent phosphohydrolase [Shewanella putrefaciens CN-32]
Length = 860
Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 6/73 (8%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSV 79
G + + D + V +L IN+ A+ + L DG
Sbjct: 673 GGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKDNYALDTFVILEQDGEP---- 728
Query: 80 LEKLSVNVTIRFV 92
+ +LS +IR
Sbjct: 729 VSQLSRIQSIRKA 741
>gi|300854195|ref|YP_003779179.1| homoserine dehydrogenase [Clostridium ljungdahlii DSM 13528]
gi|300434310|gb|ADK14077.1| homoserine dehydrogenase [Clostridium ljungdahlii DSM 13528]
Length = 434
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D G++ + ILG++ +++ GR +S + L + + + +
Sbjct: 359 MDQSGVLGEITTILGKHNVSLRSVMQKGREESKDKVTIVLITHKIEEAEINSAIEEIINL 418
Query: 90 RFVKQF 95
+ V Q
Sbjct: 419 KSVMQI 424
>gi|206901091|ref|YP_002250691.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Dictyoglomus
thermophilum H-6-12]
gi|206740194|gb|ACI19252.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Dictyoglomus
thermophilum H-6-12]
Length = 727
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQST-EHAISFLCIDGSILNS-VLEKLSV 85
I D +G++ + + + INI + + ID ++E++
Sbjct: 654 IEAIDRVGLLKDIIERVAQARINILDLATKVGKDGIARIKLIVEIDNPPAFYYLMEEIKK 713
Query: 86 NVTIRFVKQFE 96
I V++ +
Sbjct: 714 LSDIISVRRLQ 724
>gi|253699682|ref|YP_003020871.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. M21]
gi|251774532|gb|ACT17113.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. M21]
Length = 716
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 20/68 (29%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
D GI+ + + NI A + E+ D L V +
Sbjct: 648 NDEKGILANIATAITNCEANISSASIQSTLDKRGENLFEVDVTDLDHLKKVFAAIMKVKG 707
Query: 89 IRFVKQFE 96
+ V++
Sbjct: 708 VIKVERLR 715
>gi|116327856|ref|YP_797576.1| acetolactate synthase 3 regulatory subunit [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116330740|ref|YP_800458.1| acetolactate synthase 3 regulatory subunit [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
gi|116120600|gb|ABJ78643.1| Acetolactate synthase, small subunit [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116124429|gb|ABJ75700.1| Acetolactate synthase, small subunit [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 161
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
++ I+ + G++ V + NI +G + E + + + G+ V +
Sbjct: 3 HILKILVNNHPGVMSHVSGLFTRRSYNIDSIAVGVTVDPEISSMVIVVKGNESTVEQVKK 62
Query: 82 KLSVNVTIRFV 92
+L + V
Sbjct: 63 QLLKLPDVLEV 73
>gi|329919606|ref|ZP_08276595.1| alanine--tRNA ligase [Lactobacillus iners SPIN 1401G]
gi|328937411|gb|EGG33833.1| alanine--tRNA ligase [Lactobacillus iners SPIN 1401G]
Length = 877
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 1 VFSDG---KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVG-NILGEYGINIAHFHL 56
+F + K R ++I + + + G N D +G++ V + +G A
Sbjct: 648 LFGEKYHEKVRVVQINDFSIEFCGGTH---CENTDQIGMLKIVSESAIG------AGMRR 698
Query: 57 GRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
+ + + A + IL + +++
Sbjct: 699 IVAVTGQQAYEYAVKHDEILKEIQDEVKATK 729
>gi|258404656|ref|YP_003197398.1| formyltetrahydrofolate deformylase [Desulfohalobium retbaense DSM
5692]
gi|257796883|gb|ACV67820.1| formyltetrahydrofolate deformylase [Desulfohalobium retbaense DSM
5692]
Length = 289
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 13/51 (25%), Gaps = 1/51 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGS 74
+ I D GIV V L +G NI L
Sbjct: 10 RLLITCPDRPGIVAAVTGFLYAHGANINTLDQHTTDPEGGTFFMRLEFQTP 60
>gi|197119579|ref|YP_002140006.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Geobacter
bemidjiensis Bem]
gi|197088939|gb|ACH40210.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Geobacter
bemidjiensis Bem]
Length = 716
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 20/68 (29%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
D GI+ + + NI A + E+ D L V +
Sbjct: 648 NDEKGILANIATAITNCEANISSASIQSTLDKRGENLFEVDVTDLDHLKKVFAAIMKVKG 707
Query: 89 IRFVKQFE 96
+ V++
Sbjct: 708 VIKVERLR 715
>gi|83942256|ref|ZP_00954717.1| acetolactate synthase small subunit [Sulfitobacter sp. EE-36]
gi|83846349|gb|EAP84225.1| acetolactate synthase small subunit [Sulfitobacter sp. EE-36]
Length = 186
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + ++ + G++ V + G NI + T H +S + I S V+E
Sbjct: 27 ERHTLAVLVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGH-LSRITIVTSGTPQVIE 85
Query: 82 KLSV 85
++
Sbjct: 86 QIKA 89
>gi|325292409|ref|YP_004278273.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium sp. H13-3]
gi|325060262|gb|ADY63953.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium sp. H13-3]
Length = 763
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 8/74 (10%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SV 79
+ I + G + V + +NI ++ R S L +D + + +
Sbjct: 689 RVMINALNEPGTLASVAQSIATLDVNIRALNMVR---IGTDFSELALDVEVWDLRQLNQL 745
Query: 80 LEKLSVNVTIRFVK 93
L +L + VK
Sbjct: 746 LSQLKDLDCVSTVK 759
>gi|324999169|ref|ZP_08120281.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudonocardia sp. P1]
Length = 777
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 5/79 (6%)
Query: 19 VDIGRLMICIVNA---DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDG 73
V + + + D ++ V +L + +NI A R + SF D
Sbjct: 692 VSPESVFLVAIQVEALDRHRLLSDVTKVLADEKVNILSASTTTSRDRVAVSRFSFEMGDP 751
Query: 74 SILNSVLEKLSVNVTIRFV 92
L +L+ + + V
Sbjct: 752 KHLGHLLQAVRNIEGVYDV 770
>gi|294677079|ref|YP_003577694.1| acetolactate synthase small subunit [Rhodobacter capsulatus SB
1003]
gi|294475899|gb|ADE85287.1| acetolactate synthase, small subunit [Rhodobacter capsulatus SB
1003]
Length = 186
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ ++ + G++ V + G NI + H S + I +V+E++
Sbjct: 29 HTLAVIVENEPGVLARVIGLFSGRGYNIDSLTVAEIDHKGH-RSRITIVTRGTEAVIEQI 87
Query: 84 SV 85
Sbjct: 88 RA 89
>gi|261210966|ref|ZP_05925256.1| transcriptional repressor protein TyrR [Vibrio sp. RC341]
gi|260839941|gb|EEX66541.1| transcriptional repressor protein TyrR [Vibrio sp. RC341]
Length = 513
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + ++ ID + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEI--DVIGIIYLNCPDIDFETFSELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|218438438|ref|YP_002376767.1| acetolactate synthase 3 regulatory subunit [Cyanothece sp. PCC
7424]
gi|218171166|gb|ACK69899.1| acetolactate synthase, small subunit [Cyanothece sp. PCC 7424]
Length = 175
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + D I+ + +
Sbjct: 3 HTLSVLVQDEAGVLTRIAGLFARRGFNIESLAVGPAEQLGISRITMVVSGDDGIIEQITK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 63 QLYKLINVLKVQDIT 77
>gi|127514427|ref|YP_001095624.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella
loihica PV-4]
gi|126639722|gb|ABO25365.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella loihica PV-4]
Length = 701
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF---LCIDGSIL-NSVLE 81
+ I + G + + +I+ G NI + L + + + + +V+
Sbjct: 629 LRIEIVNHQGALAKITSIVAAEGSNIHN--LSTEERDGRVFLINLRISVTDRVHLANVMR 686
Query: 82 KLSVNVTIRF 91
++ V +
Sbjct: 687 RIRVLPEVLR 696
>gi|304406928|ref|ZP_07388582.1| Prephenate dehydrogenase [Paenibacillus curdlanolyticus YK9]
gi|304343915|gb|EFM09755.1| Prephenate dehydrogenase [Paenibacillus curdlanolyticus YK9]
Length = 363
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHL--GRSQSTEHAISFLCIDGSILNSVLE 81
D GI+ + LG IN+++ + R + +V+
Sbjct: 302 DHPGIIGRITTELGNRRINLSNIQIIESREDVPGILRLSFRTQDDLDQAVVA 353
>gi|301059864|ref|ZP_07200755.1| acetolactate synthase, small subunit [delta proteobacterium
NaphS2]
gi|300446014|gb|EFK09888.1| acetolactate synthase, small subunit [delta proteobacterium
NaphS2]
Length = 166
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 8/73 (10%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSV 79
+ ++ ++ + G++ + + G NI + + + + L D ++ +
Sbjct: 7 EKHILSLMVDNRPGVLSRIVGLFSGRGFNIESLCVAETADADISRITLVTCGDMGVIEQI 66
Query: 80 LEKLSVNVTIRFV 92
++L+ + + V
Sbjct: 67 KKQLNKLINVIKV 79
>gi|152977031|ref|YP_001376548.1| CBS domain-containing protein [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152025783|gb|ABS23553.1| CBS domain containing protein [Bacillus cytotoxicus NVH 391-98]
Length = 214
Score = 35.4 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I + INI + ++ + I V+E L
Sbjct: 145 KNEPGILGKVVTIFSDLQINIVSVLVYPAKDENEKVLVFRIQTMNPLRVIEALEK 199
>gi|323350422|ref|ZP_08086085.1| acetolactate synthase small subunit [Streptococcus sanguinis
VMC66]
gi|322123359|gb|EFX95037.1| acetolactate synthase small subunit [Streptococcus sanguinis
VMC66]
gi|325689074|gb|EGD31082.1| acetolactate synthase small subunit [Streptococcus sanguinis
SK115]
gi|325697547|gb|EGD39433.1| acetolactate synthase small subunit [Streptococcus sanguinis
SK160]
gi|327462859|gb|EGF09181.1| acetolactate synthase small subunit [Streptococcus sanguinis
SK1057]
gi|327472317|gb|EGF17748.1| acetolactate synthase small subunit [Streptococcus sanguinis
SK408]
gi|328944947|gb|EGG39105.1| acetolactate synthase small subunit [Streptococcus sanguinis
SK1087]
Length = 158
Score = 35.4 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G +++ E + + ID + L V + +
Sbjct: 4 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGTTENPEVSRITIIIDVASLAEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ V+
Sbjct: 64 QLNRQIDVIRVRDIT 78
>gi|259501304|ref|ZP_05744206.1| alanine-tRNA ligase [Lactobacillus iners DSM 13335]
gi|259167274|gb|EEW51769.1| alanine-tRNA ligase [Lactobacillus iners DSM 13335]
Length = 906
Score = 35.4 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 1 VFSDG---KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVG-NILGEYGINIAHFHL 56
+F + K R ++I + + + G N D +G++ V + +G A
Sbjct: 677 LFGEKYHEKVRVVQINDFSIEFCGGTH---CENTDQIGMLKIVSESAIG------AGMRR 727
Query: 57 GRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
+ + + A + IL + +++
Sbjct: 728 IVAVTGQQAYEYAVKHDEILKEIQDEVKATK 758
>gi|254719423|ref|ZP_05181234.1| acetolactate synthase 3 regulatory subunit [Brucella sp. 83/13]
gi|265984427|ref|ZP_06097162.1| acetolactate synthase 3 regulatory subunit [Brucella sp. 83/13]
gi|306839199|ref|ZP_07472016.1| acetolactate synthase, small subunit [Brucella sp. NF 2653]
gi|264663019|gb|EEZ33280.1| acetolactate synthase 3 regulatory subunit [Brucella sp. 83/13]
gi|306405746|gb|EFM62008.1| acetolactate synthase, small subunit [Brucella sp. NF 2653]
Length = 190
Score = 35.4 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ ++ + G++ V + G NI + E +S + I VL
Sbjct: 21 PETHTLAVLVDNEPGVLARVIGLFSGRGYNIESLTVS-ETEHERHLSRITIVTRGTPHVL 79
Query: 81 EKLS 84
+++
Sbjct: 80 DQIR 83
>gi|222149072|ref|YP_002550029.1| acetolactate synthase 3 regulatory subunit [Agrobacterium vitis S4]
gi|221736057|gb|ACM37020.1| acetolactate synthase small subunit [Agrobacterium vitis S4]
Length = 190
Score = 35.4 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 26/88 (29%), Gaps = 12/88 (13%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ + ++ + G++ V + G NI + E +S + I
Sbjct: 19 AAVESHTLSVLVDNEPGVLARVIGLFSGRGYNIESLTVS-ETEHEAHLSRITIVTRGTPL 77
Query: 79 VLEKLSV-----------NVTIRFVKQF 95
VLE++ +Q
Sbjct: 78 VLEQIKAQLERIVPVHRVLDLTVRARQL 105
>gi|328912383|gb|AEB63979.1| prephenate dehydrogenase [Bacillus amyloliquefaciens LL3]
Length = 375
Score = 35.4 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 17/58 (29%), Gaps = 2/58 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL--GRSQSTEHAISFLCIDGS 74
+ + D G++ + IL + I+I + + R D
Sbjct: 298 AIPSFYDLYVDVPDHPGVISEITAILADEKISITNIRIIETREDINGILRISFQTDDD 355
>gi|326382076|ref|ZP_08203769.1| homoserine dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
gi|326199502|gb|EGD56683.1| homoserine dehydrogenase [Gordonia neofelifaecis NRRL B-59395]
Length = 435
Score = 35.4 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 26/84 (30%), Gaps = 7/84 (8%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
+ D R + + AD G++ V + ++IA R + + +
Sbjct: 347 SIDEVPTRYYVSMKVADRPGVLQQVAGEFSKRDVSIAAV---RQEGAGDNARLIVVTHRA 403
Query: 76 LN----SVLEKLSVNVTIRFVKQF 95
+ + L ++ V
Sbjct: 404 SDRAQSETVAALEKMDSVLKVSSV 427
>gi|325132588|gb|EGC55281.1| homoserine dehydrogenase [Neisseria meningitidis M6190]
Length = 464
Score = 35.4 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 374 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 433
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 434 EKHIKSAIAAIEA 446
>gi|315653055|ref|ZP_07905983.1| alanine--tRNA ligase [Lactobacillus iners ATCC 55195]
gi|315489590|gb|EFU79224.1| alanine--tRNA ligase [Lactobacillus iners ATCC 55195]
Length = 906
Score = 35.4 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 1 VFSDG---KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVG-NILGEYGINIAHFHL 56
+F + K R ++I + + + G N D +G++ V + +G A
Sbjct: 677 LFGEKYHEKVRVVQINDFSIEFCGGTH---CENTDQIGMLKIVSESAIG------AGMRR 727
Query: 57 GRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
+ + + A + IL + +++
Sbjct: 728 IVAVTGQQAYEYAVKHDEILKEIQDEVKATK 758
>gi|307693431|ref|ZP_07635668.1| acetolactate synthase, small subunit [Ruminococcaceae bacterium
D16]
Length = 161
Score = 35.4 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG--SILNSVLEKLSVNVT 88
+ G++ + + NI +G + + + +D +++ V ++L+ +
Sbjct: 10 ENRAGVLNRITGLFSRRAFNIDSLAVGVTDDPTISRITIIVDSGNNVVEQVEKQLNKLIE 69
Query: 89 IRFVKQFE 96
+ V+ E
Sbjct: 70 VIKVRTLE 77
>gi|304387510|ref|ZP_07369699.1| homoserine dehydrogenase [Neisseria meningitidis ATCC 13091]
gi|304338397|gb|EFM04518.1| homoserine dehydrogenase [Neisseria meningitidis ATCC 13091]
Length = 464
Score = 35.4 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 374 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 433
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 434 EKHIKSAIAAIEA 446
>gi|312197027|ref|YP_004017088.1| prephenate dehydratase [Frankia sp. EuI1c]
gi|311228363|gb|ADP81218.1| prephenate dehydratase [Frankia sp. EuI1c]
Length = 309
Score = 35.4 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 24/78 (30%), Gaps = 8/78 (10%)
Query: 27 CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST-EHAISFLCI----DGSILNSVLE 81
C D G ++ V GI++ ++ + D +VL
Sbjct: 218 CFQQRDRPGSLMTVLEPFARAGIDLLRIESRPTRDGLGRFYFLIEWRGHPDDPPPRAVLR 277
Query: 82 KLSVNVTIRFVKQF-EFN 98
+L+ V+ F+
Sbjct: 278 ELA--ERAVRVRVLGTFD 293
>gi|268594819|ref|ZP_06128986.1| homoserine dehydrogenase [Neisseria gonorrhoeae 35/02]
gi|293399059|ref|ZP_06643224.1| homoserine dehydrogenase [Neisseria gonorrhoeae F62]
gi|268548208|gb|EEZ43626.1| homoserine dehydrogenase [Neisseria gonorrhoeae 35/02]
gi|291610473|gb|EFF39583.1| homoserine dehydrogenase [Neisseria gonorrhoeae F62]
Length = 464
Score = 35.4 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 374 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 433
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 434 EKHIKSAIAAIEA 446
>gi|149914982|ref|ZP_01903511.1| acetolactate synthase, small subunit [Roseobacter sp. AzwK-3b]
gi|149811170|gb|EDM71007.1| acetolactate synthase, small subunit [Roseobacter sp. AzwK-3b]
Length = 190
Score = 35.4 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ ++ + G++ V + G NI + T H + V+E
Sbjct: 27 ESHTLAVIVDNEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGHTSRITIVTTGTPQ-VIE 85
Query: 82 KLSV 85
++
Sbjct: 86 QIKA 89
>gi|119897359|ref|YP_932572.1| chorismate mutase/prephenate dehydratase [Azoarcus sp. BH72]
gi|119669772|emb|CAL93685.1| chorismate mutase/prephenate dehydratase [Azoarcus sp. BH72]
Length = 354
Score = 35.4 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 23/85 (27%), Gaps = 8/85 (9%)
Query: 18 DVDIGRL---MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID-- 72
D + + G + + L +G++++ R + +D
Sbjct: 263 DAGPSGNDKTSLVCSAQNRPGAMHALLEPLARHGVDMSKLE-SRPARSGLWEYVFYVDIQ 321
Query: 73 -GSILNSVLEKLSVN-VTIRFVKQF 95
+V L FVK
Sbjct: 322 GHQTDAAVAAALRELNERAAFVKVL 346
>gi|52080295|ref|YP_079086.1| hypothetical protein BL01197 [Bacillus licheniformis ATCC 14580]
gi|52785672|ref|YP_091501.1| hypothetical protein BLi01913 [Bacillus licheniformis ATCC 14580]
gi|319645924|ref|ZP_08000154.1| hypothetical protein HMPREF1012_01188 [Bacillus sp. BT1B_CT2]
gi|52003506|gb|AAU23448.1| hypothetical protein BL01197 [Bacillus licheniformis ATCC 14580]
gi|52348174|gb|AAU40808.1| conserved hypothetical protein [Bacillus licheniformis ATCC
14580]
gi|317391674|gb|EFV72471.1| hypothetical protein HMPREF1012_01188 [Bacillus sp. BT1B_CT2]
Length = 263
Score = 35.4 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Query: 29 VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
+ + G++ + ++LG INI + +Q + ID LE + +
Sbjct: 12 IQVNRPGLLGDISSLLGMLSINIVTINGVDTQRRGLLLKCRHIDQIKR---LESILNTMD 68
Query: 89 IRFVKQFE 96
V +
Sbjct: 69 TIKVTKLR 76
>gi|296268864|ref|YP_003651496.1| homoserine dehydrogenase [Thermobispora bispora DSM 43833]
gi|296091651|gb|ADG87603.1| Homoserine dehydrogenase [Thermobispora bispora DSM 43833]
Length = 435
Score = 35.0 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 7/64 (10%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D G++ V + + ++I + + + A L + ++ + +
Sbjct: 362 DKPGVLARVAEVFARHDVSI--QTVRQEGRGDDAQLVLVTHQATDAALSATVQDLGRLDI 419
Query: 92 VKQF 95
V+
Sbjct: 420 VRAV 423
>gi|289706011|ref|ZP_06502384.1| aspartate kinase II [Micrococcus luteus SK58]
gi|289557213|gb|EFD50531.1| aspartate kinase II [Micrococcus luteus SK58]
Length = 428
Score = 35.0 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 7/66 (10%), Positives = 19/66 (28%), Gaps = 3/66 (4%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SV 79
+ + D+ G + ++ E +NI + + + I+
Sbjct: 271 EGKVTIVGVPDVPGKAAEIFRVIAESNVNI-DMIVQNISREGSGRTDISFTLPIVEGKDA 329
Query: 80 LEKLSV 85
+ L
Sbjct: 330 MAALRA 335
>gi|268326000|emb|CBH39588.1| conserved hypothetical protein, containing ACT domain [uncultured
archaeon]
Length = 144
Score = 35.0 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG 73
+ + D G + + N LGE IN+ + + + E A+ L +D
Sbjct: 73 LAVAIRDSPGGLYEIANTLGENNINMDYAYAFVTAKAERAMLILRVDD 120
Score = 34.6 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 7/45 (15%), Positives = 14/45 (31%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
I I + G + V L + +NI + + +
Sbjct: 7 ISIFMENKPGRMARVAKALADANVNIRALTIAEAGDFGIVRMVVD 51
>gi|303284675|ref|XP_003061628.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456958|gb|EEH54258.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 557
Score = 35.0 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Query: 12 IQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI 71
I +++ + I IV + G++ V + G N+ +G ++ + + +
Sbjct: 371 IPKMDPNAKYTPHTISIVVMNKPGVLDVVTGVFARRGYNVQSLGVGPEKTFDVSRISTVV 430
Query: 72 DGSILN--SVLEKLSVNVTIRFV 92
G+ + +L+++ +
Sbjct: 431 PGTYDDVTKLLKQILKVPYVISA 453
>gi|171910284|ref|ZP_02925754.1| homoserine dehydrogenase [Verrucomicrobium spinosum DSM 4136]
Length = 417
Score = 35.0 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ V +LG+ GI I+ +E L +D + L +V E + +
Sbjct: 342 DDKPGVLAQVAALLGDRGIGISSVMQPEELGSEFTSLILMLDDATLATVKEAIGSIAALE 401
Query: 91 FVK 93
V+
Sbjct: 402 CVR 404
>gi|169827079|ref|YP_001697237.1| L-serine dehydratase subunit beta [Lysinibacillus sphaericus
C3-41]
gi|168991567|gb|ACA39107.1| L-serine dehydratase beta subunit [Lysinibacillus sphaericus
C3-41]
Length = 44
Score = 35.0 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 20/43 (46%)
Query: 54 FHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
+ R + A+ + +D +I VL+++S+ I V +
Sbjct: 1 MEVSRIERGLTALMVIEVDQNIEEKVLQQISLIPYITKVSKIN 43
>gi|120602566|ref|YP_966966.1| amino acid-binding ACT domain-containing protein [Desulfovibrio
vulgaris DP4]
gi|120562795|gb|ABM28539.1| ACT domain protein [Desulfovibrio vulgaris DP4]
Length = 170
Score = 35.0 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ G + V L E GINI L + + D SVL+
Sbjct: 38 ENKAGRLAEVTGTLAEAGINIRALSLADTSDFGILRLIVN-DHEKAKSVLK 87
>gi|20093983|ref|NP_613830.1| acetolactate synthase small subunit [Methanopyrus kandleri AV19]
gi|19886945|gb|AAM01760.1| Acetolactate synthase, small subunit [Methanopyrus kandleri AV19]
Length = 167
Score = 35.0 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVT 88
D G++ V + G NI G S+ A L + + + V+++L+ V
Sbjct: 20 KDRPGVMQRVSGLFRRRGFNIDSIAEGPSEREGLARMTLTVKGNEQTIEQVVKQLNKLVD 79
Query: 89 IRFVKQF 95
+ V +
Sbjct: 80 VIKVSEL 86
>gi|121729926|ref|ZP_01682349.1| formyltetrahydrofolate deformylase [Vibrio cholerae V52]
gi|121628333|gb|EAX60839.1| formyltetrahydrofolate deformylase [Vibrio cholerae V52]
Length = 153
Score = 35.0 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + + D G++ + NI ++ +NI H + ++ H ++G ++ L
Sbjct: 1 MEKKTLLTHCPDAPGLISKITNICYKHQLNIIHNNEFVDNASGHFFMRTELEGYFNDATL 60
Query: 81 EKLSVNVTIR 90
L+
Sbjct: 61 --LADLDHAL 68
>gi|332180256|gb|AEE15944.1| ACT domain-containing protein [Treponema brennaborense DSM 12168]
Length = 89
Score = 35.0 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+I +V D +GI+ V L ++GINIA ++ + + + + +D + + ++ L
Sbjct: 4 IITVVGTDQVGIIAKVSAFLAKHGINIADI--SQTILSGNFVMMMMVDLASSDVPIDDLR 61
Query: 85 V 85
Sbjct: 62 S 62
>gi|309805316|ref|ZP_07699367.1| alanine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
gi|308165392|gb|EFO67624.1| alanine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
Length = 877
Score = 35.0 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 1 VFSDG---KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVG-NILGEYGINIAHFHL 56
+F + K R ++I + + + G N D +G++ V + +G A
Sbjct: 648 LFGEKYHEKVRVVQINDFSIEFCGGTH---CENTDQIGMLKIVSESAIG------AGMRR 698
Query: 57 GRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
+ + + A + IL + +++
Sbjct: 699 IVAVTGQQAYEYAVKHDEILKEIQDEVKATK 729
>gi|227495275|ref|ZP_03925591.1| acetolactate synthase [Actinomyces coleocanis DSM 15436]
gi|226831145|gb|EEH63528.1| acetolactate synthase [Actinomyces coleocanis DSM 15436]
Length = 175
Score = 35.0 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILN 77
+ + ++ + G++ V + NI +G ++ + + L + D +
Sbjct: 7 PAKHALSVLVENKPGVLTRVTALFARRSFNIVSLAVGETEHPKVSRITLVVEASDNEV-E 65
Query: 78 SVLEKLSVNVTIRFV 92
++++L+ + + +
Sbjct: 66 QIVKQLNKLINVLKI 80
>gi|110667716|ref|YP_657527.1| threonine dehydratase [Haloquadratum walsbyi DSM 16790]
gi|109625463|emb|CAJ51890.1| threonine ammonia-lyase [Haloquadratum walsbyi DSM 16790]
Length = 428
Score = 35.0 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 8/67 (11%), Positives = 23/67 (34%), Gaps = 6/67 (8%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST---EHAISFLCID---GSILNS 78
+ + D G + + I+ + NI + RS + A ++ +
Sbjct: 350 RLRVRIDDRPGKMADISGIIADQRANIHNVRHDRSVANLAVGEAYLVFTVEASGAEHTAT 409
Query: 79 VLEKLSV 85
+++ +
Sbjct: 410 IVDAIES 416
>gi|56461480|ref|YP_156761.1| (p)ppGpp synthetase I [Idiomarina loihiensis L2TR]
gi|56180490|gb|AAV83212.1| (p)ppGpp synthetase I [Idiomarina loihiensis L2TR]
Length = 701
Score = 35.0 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 27/74 (36%), Gaps = 8/74 (10%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-----NSVLEK 82
I + G++ + + + G NI ++ + I F+ + +I V+
Sbjct: 630 IEIVNNQGVLAKLTSAIATTGCNIDGLQ---TEEIDANIYFIDVALTIKNRKHLADVIRH 686
Query: 83 LSVNVTIRFVKQFE 96
+ ++ V +
Sbjct: 687 IRKMPDVQRVTRLR 700
>gi|325290266|ref|YP_004266447.1| acetolactate synthase, small subunit [Syntrophobotulus glycolicus
DSM 8271]
gi|324965667|gb|ADY56446.1| acetolactate synthase, small subunit [Syntrophobotulus glycolicus
DSM 8271]
Length = 159
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ V + NI + ++++ ++ + + DG ++ V +
Sbjct: 3 HTLAVLVENNPGVLARVSGLFARRAYNIYSLTVSQTENPALSLMTIVVEGDGQVIEQVTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V
Sbjct: 63 QLHKLIVVHKVTNLS 77
>gi|149203770|ref|ZP_01880739.1| acetolactate synthase small subunit [Roseovarius sp. TM1035]
gi|149142887|gb|EDM30929.1| acetolactate synthase small subunit [Roseovarius sp. TM1035]
Length = 186
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ ++ + G++ V + G NI + T H + V+E
Sbjct: 27 ETHTLAVLVDNEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGHTSRITIVTTGTPQ-VIE 85
Query: 82 KLSV 85
++
Sbjct: 86 QIKA 89
>gi|126435569|ref|YP_001071260.1| putative adenylate/guanylate cyclase [Mycobacterium sp. JLS]
gi|126235369|gb|ABN98769.1| putative adenylate/guanylate cyclase [Mycobacterium sp. JLS]
Length = 275
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 9/75 (12%)
Query: 7 PRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
R ++I M V+ + + LG +NIA + R+ +
Sbjct: 166 VRSVEIDGY------SPRMRVGVHTGRPQRIG--SDWLG-VDVNIAARVMERATRGGLIV 216
Query: 67 SFLCIDGSILNSVLE 81
S +D +
Sbjct: 217 SQATLDRIPAEELAA 231
>gi|325128366|gb|EGC51250.1| homoserine dehydrogenase [Neisseria meningitidis N1568]
Length = 435
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 405 EKHIKSAIAAIEA 417
>gi|282881989|ref|ZP_06290630.1| GTP diphosphokinase [Peptoniphilus lacrimalis 315-B]
gi|281298019|gb|EFA90474.1| GTP diphosphokinase [Peptoniphilus lacrimalis 315-B]
Length = 711
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R +++ + + I + D ++ V N + E +N+ + ++ + +
Sbjct: 620 RIVQVSWQKDEANSYEAAIEVRALDKPNVIGDVANRINEAKLNMTSLNARSTRDGDAIVD 679
Query: 68 FLCIDGSIL--NSVLEKLSVNVTIRFV 92
+ +I ++EKL + V
Sbjct: 680 VILEITNIDELEGIIEKLKRVKNVFDV 706
>gi|295676442|ref|YP_003604966.1| Homoserine dehydrogenase [Burkholderia sp. CCGE1002]
gi|295436285|gb|ADG15455.1| Homoserine dehydrogenase [Burkholderia sp. CCGE1002]
Length = 443
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 27/92 (29%), Gaps = 9/92 (9%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHF-----HLGRSQSTEHAISFLC 70
+ + + AD+ G++ + +L + GI+I L + L
Sbjct: 349 PIEEVTSGYYLRLRVADVTGVLADITRVLADTGISIDALLQKESELVDANGKGETDILLI 408
Query: 71 IDGSILNSVLEKLSVNVT----IRFVKQFEFN 98
++ V + + V +
Sbjct: 409 THETVEKQVNAAIKSIEGLKTVVSQVTKLRME 440
>gi|261823049|ref|YP_003261155.1| acetolactate synthase 1 regulatory subunit [Pectobacterium
wasabiae WPP163]
gi|261607062|gb|ACX89548.1| amino acid-binding ACT domain protein [Pectobacterium wasabiae
WPP163]
Length = 97
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKLSVNVTI 89
+ G++ V + N+ S E + +L + D L ++ ++ +
Sbjct: 17 RNHPGVMSHVCGLFARRAFNVEGILCMPLASGEESRIWLLVKDDQRLQQMISQVEKLEDV 76
Query: 90 RFVK 93
V+
Sbjct: 77 LQVR 80
>gi|238919735|ref|YP_002933250.1| DNA-binding transcriptional regulator TyrR [Edwardsiella ictaluri
93-146]
gi|238869304|gb|ACR69015.1| transcriptional regulatory protein TyrR [Edwardsiella ictaluri
93-146]
Length = 528
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 8/67 (11%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D +G+ + ++L I++ + ++F +D + ++ ++ +
Sbjct: 8 EDRIGLTRELLDLLAARNIDLRGIEI--DTIGRIYLNFNELDFEVFRQLMAEIRRISGVT 65
Query: 91 FVKQFEF 97
V+ F
Sbjct: 66 DVRTVPF 72
>gi|229270474|ref|YP_975166.2| homoserine dehydrogenase [Neisseria meningitidis FAM18]
gi|325138361|gb|EGC60930.1| homoserine dehydrogenase [Neisseria meningitidis ES14902]
gi|325205996|gb|ADZ01449.1| homoserine dehydrogenase [Neisseria meningitidis M04-240196]
Length = 435
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 405 EKHIKSAIAAIEA 417
>gi|209963615|ref|YP_002296530.1| hypothetical protein RC1_0268 [Rhodospirillum centenum SW]
gi|209957081|gb|ACI97717.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 174
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 27/90 (30%), Gaps = 14/90 (15%)
Query: 17 FDVDIGRL-------MICIVNADILGIVVFVGNILGEYGINIAHFH--LGRSQSTEHAIS 67
+V + +V D GI+ V ++L E G+NI L T +
Sbjct: 76 VEVTPEPHPPEGSRFSVSLVGQDRQGILREVTSVLAEMGVNIESLETGLEHEAWTGQKLF 135
Query: 68 FLCIDGSIL-----NSVLEKLSVNVTIRFV 92
+ + V + L V
Sbjct: 136 RADVQIFVPASLPLEVVADALEHISGEIMV 165
>gi|54307922|ref|YP_128942.1| hypothetical protein PBPRA0727 [Photobacterium profundum SS9]
gi|46912348|emb|CAG19140.1| hypothetical protein PBPRA0727 [Photobacterium profundum SS9]
Length = 170
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ--STEHAISFLCIDGSILNSV 79
+ + D GIV V +L + INI + + I I ++
Sbjct: 87 HQLTVTGNDRPGIVKEVTTLLSQLNININILETETQSAPNWGYPIFIANFQLEIPANI 144
>gi|291276785|ref|YP_003516557.1| formyltetrahydrofolate deformylase [Helicobacter mustelae 12198]
gi|290963979|emb|CBG39818.1| formyltetrahydrofolate deformylase [Helicobacter mustelae 12198]
Length = 279
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 20/57 (35%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
I I+ D G++ + IL + +NI + + G + +L
Sbjct: 6 HTILILCPDQQGLIFQISAILSKANLNIEKNDEFVDKEQNMFFMRTEVSGELDKELL 62
>gi|239831487|ref|ZP_04679816.1| RelA/SpoT family protein [Ochrobactrum intermedium LMG 3301]
gi|239823754|gb|EEQ95322.1| RelA/SpoT family protein [Ochrobactrum intermedium LMG 3301]
Length = 748
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
+ + + G + + I+ NI + + R+ + + + D LN ++
Sbjct: 674 RVSVSAINSPGSLAEIAQIVAANDANIHNLSMVRTAP-DFTEMIIDVEVWDLKHLNRIIS 732
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 733 QLKESASVSGAKRVN 747
>gi|145589013|ref|YP_001155610.1| (p)ppGpp synthetase I, SpoT/RelA [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145047419|gb|ABP34046.1| (p)ppGpp synthetase I, SpoT/RelA [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 676
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 5/71 (7%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEK 82
+ + D ++ + IL G+++ L +S A L + D +L V
Sbjct: 606 LVVSGVDRPELMRELFEILTRQGVHVID--LRKSAKKGLAQILLTVEIKDSEVLRVVQNS 663
Query: 83 LSVNVTIRFVK 93
L + V+
Sbjct: 664 LEEVKGVTQVR 674
>gi|325140542|gb|EGC63063.1| homoserine dehydrogenase [Neisseria meningitidis CU385]
Length = 464
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 374 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 433
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 434 EKHIKSAIAAIEA 446
>gi|294495390|ref|YP_003541883.1| amino acid-binding ACT domain protein [Methanohalophilus mahii DSM
5219]
gi|292666389|gb|ADE36238.1| amino acid-binding ACT domain protein [Methanohalophilus mahii DSM
5219]
Length = 145
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG 73
++ I D+ G + + +LG+ G+NI + + TE A + ++
Sbjct: 71 ETDVLGIQMEDVPGQLATISEVLGKKGVNIDYAYAF-VTKTEKAFLIIRVND 121
>gi|260911320|ref|ZP_05917919.1| GTP diphosphokinase [Prevotella sp. oral taxon 472 str. F0295]
gi|260634580|gb|EEX52671.1| GTP diphosphokinase [Prevotella sp. oral taxon 472 str. F0295]
Length = 757
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 11/89 (12%)
Query: 17 FDVDIGRL--MIC-----IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
D M+ I D G++ V ++ +NI L S +
Sbjct: 669 LDAKWDMHGKMLFDATIEIRGIDRHGLLRDVAEVIS-GQLNIDMRKLVISGDDGVFDGTI 727
Query: 70 CI---DGSILNSVLEKLSVNVTIRFVKQF 95
+ D + +++KL I V++
Sbjct: 728 ELRVHDRNETQGIIDKLKDIDGIHEVQRI 756
>gi|300023754|ref|YP_003756365.1| (p)ppGpp synthetase I, SpoT/RelA [Hyphomicrobium denitrificans ATCC
51888]
gi|299525575|gb|ADJ24044.1| (p)ppGpp synthetase I, SpoT/RelA [Hyphomicrobium denitrificans ATCC
51888]
Length = 739
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 18 DVDIGRL-----MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI 71
DVD I + + G + + I+GE G NI + + + + + L +
Sbjct: 653 DVDPEHPQRFPARISVTAVNEPGSLAEIAKIIGETGGNIDNIKMAKRAADFTVMYIELEV 712
Query: 72 -DGSILNSVLEKLSVNVTIRFVKQF 95
D LN ++ L ++ V++
Sbjct: 713 FDLVHLNHIIAGLRAKSSVAKVERL 737
>gi|227523639|ref|ZP_03953688.1| acetoin utilization probable/CBS domain protein [Lactobacillus
hilgardii ATCC 8290]
gi|227089211|gb|EEI24523.1| acetoin utilization probable/CBS domain protein [Lactobacillus
hilgardii ATCC 8290]
Length = 216
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 27 CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
++ D G++ +G I+ + +NI + + + +D SV KL
Sbjct: 145 VFIHQDRTGVIYEIGKIMADNNLNIQTLMVTHQ--GTIKVVEIHVDRKDGLSVASKLRE 201
>gi|182415330|ref|YP_001820396.1| aspartate kinase [Opitutus terrae PB90-1]
gi|177842544|gb|ACB76796.1| aspartate kinase [Opitutus terrae PB90-1]
Length = 405
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 7/53 (13%), Positives = 13/53 (24%), Gaps = 1/53 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
D G V L E + I + A + + + +
Sbjct: 271 DRPGSAARVFRALAEANV-IVDMIVQNIGRGGVANLTFTVPQTDSQKAVRAIE 322
>gi|113475518|ref|YP_721579.1| acetolactate synthase 3 regulatory subunit [Trichodesmium
erythraeum IMS101]
gi|110166566|gb|ABG51106.1| acetolactate synthase, small subunit [Trichodesmium erythraeum
IMS101]
Length = 172
Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ T + + + D I+ + +
Sbjct: 3 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQTGVSRITMVVPGDNGIIEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L V + V
Sbjct: 63 QLYKLVNVLKVHDIT 77
>gi|308174053|ref|YP_003920758.1| prephenate dehydrogenase [Bacillus amyloliquefaciens DSM 7]
gi|307606917|emb|CBI43288.1| prephenate dehydrogenase [Bacillus amyloliquefaciens DSM 7]
gi|328552821|gb|AEB23313.1| prephenate dehydrogenase [Bacillus amyloliquefaciens TA208]
Length = 368
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 17/58 (29%), Gaps = 2/58 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL--GRSQSTEHAISFLCIDGS 74
+ + D G++ + IL + I+I + + R D
Sbjct: 291 AIPSFYDLYVDVPDHPGVISEITAILADEKISITNIRIIETREDINGILRISFQTDDD 348
>gi|229525899|ref|ZP_04415304.1| transcriptional repressor protein TyrR [Vibrio cholerae bv.
albensis VL426]
gi|229339480|gb|EEO04497.1| transcriptional repressor protein TyrR [Vibrio cholerae bv.
albensis VL426]
Length = 537
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + ++ ID + ++ ++ ++
Sbjct: 32 EDRLGLTRELLDILASKCIDLRGIEI--DVIGIIYLNCPDIDFETFSELMAEIRRIPGVK 89
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 90 DVRKIQF 96
>gi|153009963|ref|YP_001371178.1| (p)ppGpp synthetase I SpoT/RelA [Ochrobactrum anthropi ATCC 49188]
gi|151561851|gb|ABS15349.1| (p)ppGpp synthetase I, SpoT/RelA [Ochrobactrum anthropi ATCC 49188]
Length = 748
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
+ + + G + + I+ NI + + R+ + + + D LN ++
Sbjct: 674 RVSVSAINSPGSLAEIAQIVAANDANIHNLSMVRTAP-DFTEMIIDVEVWDLKHLNRIIS 732
Query: 82 KLSVNVTIRFVKQFE 96
+L + ++ K+
Sbjct: 733 QLKESASVSGAKRVN 747
>gi|126728510|ref|ZP_01744326.1| guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative
[Sagittula stellata E-37]
gi|126711475|gb|EBA10525.1| guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative
[Sagittula stellata E-37]
Length = 712
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFH-LGRSQSTEHAISFLCI-DGSILNSVLEKLSVNVTI 89
+ G + + ++GE NI+ L R + + + D L+SV+ L +
Sbjct: 634 NDTGALGRICTLIGERKANISDMTFLDRKPDFYRIMMDIDLRDAEHLHSVVSALEAESMV 693
Query: 90 RFV 92
V
Sbjct: 694 ASV 696
>gi|189423598|ref|YP_001950775.1| amino acid-binding ACT domain protein [Geobacter lovleyi SZ]
gi|189419857|gb|ACD94255.1| amino acid-binding ACT domain protein [Geobacter lovleyi SZ]
Length = 185
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 31/88 (35%), Gaps = 9/88 (10%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
+ + + AD GIV V + L INI + + + + + ++ ++ +
Sbjct: 94 ETAGEICQVTVYGADQPGIVYRVTSTLAARQINIMDLQTKLAGTEQEPVYIMLLEATLPD 153
Query: 78 S--------VLEKLSVNVTI-RFVKQFE 96
+L L + + V+
Sbjct: 154 DCAPEEVEKLLNGLKQELQVEISVRIVT 181
>gi|85711933|ref|ZP_01042988.1| (p)ppGpp synthetase I [Idiomarina baltica OS145]
gi|85694330|gb|EAQ32273.1| (p)ppGpp synthetase I [Idiomarina baltica OS145]
Length = 701
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 27/74 (36%), Gaps = 8/74 (10%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-----NSVLEK 82
I + G + + + + G NI +++ + I F+ + +I V+
Sbjct: 630 IEIINHQGALAKLTSAIATTGCNIDGL---KTEEIDANIYFIDVALTIKNRKHLADVIRH 686
Query: 83 LSVNVTIRFVKQFE 96
+ ++ V +
Sbjct: 687 IRKMPDVQRVTRLR 700
>gi|268596799|ref|ZP_06130966.1| homoserine dehydrogenase [Neisseria gonorrhoeae FA19]
gi|291043778|ref|ZP_06569494.1| homoserine dehydrogenase [Neisseria gonorrhoeae DGI2]
gi|268550587|gb|EEZ45606.1| homoserine dehydrogenase [Neisseria gonorrhoeae FA19]
gi|291012241|gb|EFE04230.1| homoserine dehydrogenase [Neisseria gonorrhoeae DGI2]
Length = 464
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 374 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 433
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 434 EKHIKSAIAAIEA 446
>gi|254507022|ref|ZP_05119160.1| transcriptional regulator TyrR [Vibrio parahaemolyticus 16]
gi|219550017|gb|EED27004.1| transcriptional regulator TyrR [Vibrio parahaemolyticus 16]
Length = 514
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + S + D + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKNIDLRGIEIDISGIIYLNCPDIDFDTF--SELMAEIRRISGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|124248217|emb|CAL26233.1| prephenate dehydrogenase [Bacillus amyloliquefaciens FZB42]
Length = 375
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 17/58 (29%), Gaps = 2/58 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL--GRSQSTEHAISFLCIDGS 74
+ + D G++ + IL E I+I + + R D
Sbjct: 298 AIPSFYDLYVDVPDHPGVISEITAILAEEKISITNIRIIETREDINGILRISFQTDDD 355
>gi|59801193|ref|YP_207905.1| homoserine dehydrogenase [Neisseria gonorrhoeae FA 1090]
gi|239998973|ref|ZP_04718897.1| homoserine dehydrogenase [Neisseria gonorrhoeae 35/02]
gi|240016551|ref|ZP_04723091.1| homoserine dehydrogenase [Neisseria gonorrhoeae FA6140]
gi|240112959|ref|ZP_04727449.1| homoserine dehydrogenase [Neisseria gonorrhoeae MS11]
gi|268599036|ref|ZP_06133203.1| homoserine dehydrogenase [Neisseria gonorrhoeae MS11]
gi|59718088|gb|AAW89493.1| putative homoserine dehydrogenase [Neisseria gonorrhoeae FA 1090]
gi|268583167|gb|EEZ47843.1| homoserine dehydrogenase [Neisseria gonorrhoeae MS11]
gi|317164264|gb|ADV07805.1| homoserine dehydrogenase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 435
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 405 EKHIKSAIAAIEA 417
>gi|24373237|ref|NP_717280.1| transcriptional regulatory protein TyrR [Shewanella oneidensis
MR-1]
gi|24347468|gb|AAN54724.1|AE015613_1 transcriptional regulatory protein TyrR [Shewanella oneidensis
MR-1]
Length = 512
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D +G+ + +L YGIN+ + F + L++++ ++ ++
Sbjct: 8 QDRVGLAKDILVVLERYGINLIAIDASNQ--GFLYLQFAEVSFETLSALMPQIRKVESVH 65
Query: 91 FVKQFEF 97
V+ F
Sbjct: 66 DVRTVSF 72
>gi|146297055|ref|YP_001180826.1| amino acid-binding ACT domain-containing protein
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145410631|gb|ABP67635.1| ACT domain protein [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 143
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 9/84 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+I I D G + V +IL + I I + + + T+ A+ L ++
Sbjct: 62 NGFTVSAT---DVIAIAVEDKPGGLAKVLDILYKNDIGIEYMYAFVGKITDEALVILKVE 118
Query: 73 GSILNSVLEKLSVNVTIRFVKQFE 96
+ L N V+
Sbjct: 119 N--SEEAINVLKEN----NVRILS 136
>gi|307701094|ref|ZP_07638119.1| prephenate dehydrogenase [Mobiluncus mulieris FB024-16]
gi|307614089|gb|EFN93333.1| prephenate dehydrogenase [Mobiluncus mulieris FB024-16]
Length = 386
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 25/61 (40%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+I + D + ++ D G + + +G GINI F + S ++++
Sbjct: 304 RIPGKHGDAASNYGQVAVLVPDKPGFLGKLFQEIGAAGINIEDFRIEHSLGQSRGLAYIY 363
Query: 71 I 71
+
Sbjct: 364 V 364
>gi|306818600|ref|ZP_07452323.1| prephenate dehydrogenase [Mobiluncus mulieris ATCC 35239]
gi|304648773|gb|EFM46075.1| prephenate dehydrogenase [Mobiluncus mulieris ATCC 35239]
Length = 414
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 25/61 (40%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+I + D + ++ D G + + +G GINI F + S ++++
Sbjct: 332 RIPGKHGDAASNYGQVAVLVPDKPGFLGKLFQEIGAAGINIEDFRIEHSLGQSRGLAYIY 391
Query: 71 I 71
+
Sbjct: 392 V 392
>gi|325068325|ref|ZP_08126998.1| acetolactate synthase, small subunit [Actinomyces oris K20]
Length = 170
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSV 79
+ + ++ + G++ V + G NI +G ++ + + + D + V
Sbjct: 3 EKHTLSVLVENKPGVLTRVSALFTRRGFNIHSLAVGPTEHEDISRITVIADAEGLAMEQV 62
Query: 80 LEKLSVNVTIRFVKQFEFNVD 100
++L+ V + K E + D
Sbjct: 63 TKQLNKLVNVL--KIVELDPD 81
>gi|190891068|ref|YP_001977610.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase protein
[Rhizobium etli CIAT 652]
gi|190696347|gb|ACE90432.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase protein
[Rhizobium etli CIAT 652]
Length = 744
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEK 82
I + + G + V + +NI + R + + + + D LN +L +
Sbjct: 670 RIMVNGLNEPGTLAKVAQTVASLDVNIRLLNTVRVAADFTEMMLEVEVWDLRQLNQLLAQ 729
Query: 83 LSVNVTIRFVKQF 95
+ I V++
Sbjct: 730 MKELDCIATVRRL 742
>gi|189485688|ref|YP_001956629.1| acetolactate synthase small subunit [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287647|dbj|BAG14168.1| acetolactate synthase small subunit [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 157
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
+ ++ + G++ + + G NI ++ ++ + + + G V +
Sbjct: 3 HTVSVLVENKFGVLARISTLFAARGFNIDSLNVSETEDPAISRMTIVVKGDYSILEQVTK 62
Query: 82 KLSVNVTIRFV 92
+L+ V + V
Sbjct: 63 QLNKLVDVIKV 73
>gi|159041815|ref|YP_001541067.1| ACT domain-containing protein [Caldivirga maquilingensis IC-167]
gi|157920650|gb|ABW02077.1| ACT domain-containing protein [Caldivirga maquilingensis IC-167]
Length = 225
Score = 35.0 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
I +N D GI+ V ++ E G+NI + R Q
Sbjct: 22 IIRLNEDRPGILAAVSDVFAENGVNIINASFNRLQK 57
>gi|325144628|gb|EGC66927.1| homoserine dehydrogenase [Neisseria meningitidis M01-240013]
Length = 435
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 405 EKHIKSAIAAIEA 417
>gi|325136286|gb|EGC58894.1| homoserine dehydrogenase [Neisseria meningitidis M0579]
gi|325202078|gb|ADY97532.1| homoserine dehydrogenase [Neisseria meningitidis M01-240149]
gi|325208168|gb|ADZ03620.1| homoserine dehydrogenase [Neisseria meningitidis NZ-05/33]
Length = 435
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 405 EKHIKSAIAAIEA 417
>gi|295694969|ref|YP_003588207.1| formyltetrahydrofolate deformylase [Bacillus tusciae DSM 2912]
gi|295410571|gb|ADG05063.1| formyltetrahydrofolate deformylase [Bacillus tusciae DSM 2912]
Length = 305
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 18/75 (24%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D G+V V L NI + D L+ +L
Sbjct: 26 RILLSCPDRPGVVAAVSQYLYSMNANIVRMDQYSTDPDGGRLFMRVEFDLPRLSDRRREL 85
Query: 84 SVNVTIRF-VKQFEF 97
+ +
Sbjct: 86 E--EGFARTARPLDM 98
>gi|269978224|ref|ZP_06185174.1| prephenate dehydrogenase [Mobiluncus mulieris 28-1]
gi|269933733|gb|EEZ90317.1| prephenate dehydrogenase [Mobiluncus mulieris 28-1]
Length = 414
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 25/61 (40%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+I + D + ++ D G + + +G GINI F + S ++++
Sbjct: 332 RIPGKHGDAASNYGQVAVLVPDKPGFLGKLFQEIGAAGINIEDFRIEHSLGQSRGLAYIY 391
Query: 71 I 71
+
Sbjct: 392 V 392
>gi|225181560|ref|ZP_03735002.1| Prephenate dehydratase [Dethiobacter alkaliphilus AHT 1]
gi|225167808|gb|EEG76617.1| Prephenate dehydratase [Dethiobacter alkaliphilus AHT 1]
Length = 274
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL--GRSQSTEHAISFLCIDG 73
+ + + G + V ++G+N+ R Q ++ I F+ +DG
Sbjct: 185 PVPALPQKASLVFSVTNAAGSLFRVLQAFADHGVNLTRIESRPARKQLGDY-IFFVDLDG 243
Query: 74 SILN-SVLEKLSV 85
+ + +V + L
Sbjct: 244 TPDDINVKKALRQ 256
>gi|194098660|ref|YP_002001722.1| homoserine dehydrogenase [Neisseria gonorrhoeae NCCP11945]
gi|193933950|gb|ACF29774.1| homoserine dehydrogenase [Neisseria gonorrhoeae NCCP11945]
Length = 464
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 374 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 433
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 434 EKHIKSAIAAIEA 446
>gi|223938681|ref|ZP_03630571.1| acetolactate synthase, small subunit [bacterium Ellin514]
gi|223892669|gb|EEF59140.1| acetolactate synthase, small subunit [bacterium Ellin514]
Length = 157
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ + G++ V + G NI ++G ++ + + + D + L+ +++
Sbjct: 3 HTISVLVENKFGVLTRVAGLFSGRGYNIDTLNVGPTEDPKTSRMTIVTRGDDATLDQIVK 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLEKLVDVLEV 73
>gi|148982220|ref|ZP_01816649.1| PII uridylyl-transferase [Vibrionales bacterium SWAT-3]
gi|145960611|gb|EDK25963.1| PII uridylyl-transferase [Vibrionales bacterium SWAT-3]
Length = 873
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID--GSILNSVLEKLSV 85
+ D G++ VG E GIN+ + + L D G + + L
Sbjct: 803 LRALDTPGLLAQVGATFAELGINLHGAKITTIGERAEDLFILTSDTGGRLSEEQEQALRE 862
>gi|50305309|ref|XP_452614.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641747|emb|CAH01465.1| KLLA0C09306p [Kluyveromyces lactis]
Length = 470
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSILNSVLE 81
+ ++ ++ G++ V NIL + NI + + A ++ S + + +
Sbjct: 400 RVLYIHQNVPGVLKTVNNILSNH--NIEKQFS--DSNGDIAYLMADISNVNQSDIKQIYD 455
Query: 82 KLSVNVTIRFVKQF 95
+L+ ++
Sbjct: 456 ELNETDYKISIRLL 469
>gi|24216337|ref|NP_713818.1| homoserine dehydrogenase [Leptospira interrogans serovar Lai str.
56601]
gi|24197613|gb|AAN50836.1| homoserine dehydrogenase [Leptospira interrogans serovar Lai str.
56601]
Length = 429
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
+V + R + D+ G++ + +LG++G++I+ + ++++ + + + I
Sbjct: 343 NVSLVRYYLRFTTVDLPGVLSEISKVLGDHGVSISS--VRQNETEKEPVEVVVITHPATE 400
Query: 78 SVLE-KLSVNVTIRFVK 93
++ L + + ++
Sbjct: 401 ESIKNSLKIIDGLSLIR 417
>gi|15677100|ref|NP_274252.1| homoserine dehydrogenase [Neisseria meningitidis MC58]
gi|218768230|ref|YP_002342742.1| homoserine dehydrogenase [Neisseria meningitidis Z2491]
gi|254805007|ref|YP_003083228.1| Homoserine dehydrogenase [Neisseria meningitidis alpha14]
gi|7226467|gb|AAF41609.1| homoserine dehydrogenase [Neisseria meningitidis MC58]
gi|121052238|emb|CAM08563.1| putative homoserine dehydrogenase [Neisseria meningitidis Z2491]
gi|254668549|emb|CBA06000.1| Homoserine dehydrogenase [Neisseria meningitidis alpha14]
gi|254669517|emb|CBA03452.1| Homoserine dehydrogenase [Neisseria meningitidis alpha153]
gi|261392510|emb|CAX50061.1| homoserine dehydrogenase (HDH) [Neisseria meningitidis 8013]
gi|308389321|gb|ADO31641.1| putative homoserine dehydrogenase [Neisseria meningitidis alpha710]
gi|316985085|gb|EFV64038.1| homoserine dehydrogenase [Neisseria meningitidis H44/76]
gi|319410477|emb|CBY90838.1| homoserine dehydrogenase (HDH) [Neisseria meningitidis WUE 2594]
gi|325134525|gb|EGC57170.1| homoserine dehydrogenase [Neisseria meningitidis M13399]
gi|325198361|gb|ADY93817.1| homoserine dehydrogenase [Neisseria meningitidis G2136]
gi|325200142|gb|ADY95597.1| homoserine dehydrogenase [Neisseria meningitidis H44/76]
Length = 435
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 405 EKHIKSAIAAIEA 417
>gi|288553823|ref|YP_003425758.1| formyltetrahydrofolate deformylase [Bacillus pseudofirmus OF4]
gi|288544983|gb|ADC48866.1| formyltetrahydrofolate deformylase [Bacillus pseudofirmus OF4]
Length = 287
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 15/53 (28%), Gaps = 1/53 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFLCID 72
R + I D GIV V L +Y NI + D
Sbjct: 5 PNRARLLISCQDKPGIVSAVSTFLHQYDANIVQSDQFSTDPEGGMFFMRIEFD 57
>gi|317052498|ref|YP_004113614.1| RelA/SpoT family protein [Desulfurispirillum indicum S5]
gi|316947582|gb|ADU67058.1| RelA/SpoT family protein [Desulfurispirillum indicum S5]
Length = 726
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 5/67 (7%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ V ++LG+ NI + + + + L +
Sbjct: 660 KDQPGVLAGVSSVLGDNKANITNIRMVKQDINRAEVLLEFTIEVNHKDQLTHIRN----- 714
Query: 91 FVKQFEF 97
VK +F
Sbjct: 715 RVKGLDF 721
>gi|269219777|ref|ZP_06163631.1| acetolactate synthase, small subunit [Actinomyces sp. oral taxon
848 str. F0332]
gi|269211019|gb|EEZ77359.1| acetolactate synthase, small subunit [Actinomyces sp. oral taxon
848 str. F0332]
Length = 172
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLE 81
+ ++ + G++ V + NI +G ++ + + +D + + V +
Sbjct: 5 HTLSVLVENKPGVLTRVAALFARRAFNIHSLAVGETEDPRISRMTVVVDAAELPIEQVTK 64
Query: 82 KLSVNVTIRFV 92
+L+ V + +
Sbjct: 65 QLNKLVNVLKI 75
>gi|257066403|ref|YP_003152659.1| (p)ppGpp synthetase I, SpoT/RelA [Anaerococcus prevotii DSM 20548]
gi|256798283|gb|ACV28938.1| (p)ppGpp synthetase I, SpoT/RelA [Anaerococcus prevotii DSM 20548]
Length = 726
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG-SILNSVLEKLSVNVTIR 90
+ I+ + ++ +NI + + + ++ L+ V+ KL T+
Sbjct: 660 NSPSILFEITKLMSTVNVNILAINARTDKDEGTIDLLIEVNNMDQLSDVITKLKSIKTVE 719
Query: 91 FV 92
V
Sbjct: 720 NV 721
>gi|154686509|ref|YP_001421670.1| prephenate dehydrogenase [Bacillus amyloliquefaciens FZB42]
gi|154352360|gb|ABS74439.1| TyrA [Bacillus amyloliquefaciens FZB42]
Length = 368
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 17/58 (29%), Gaps = 2/58 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL--GRSQSTEHAISFLCIDGS 74
+ + D G++ + IL E I+I + + R D
Sbjct: 291 AIPSFYDLYVDVPDHPGVISEITAILAEEKISITNIRIIETREDINGILRISFQTDDD 348
>gi|116754018|ref|YP_843136.1| amino acid-binding ACT domain-containing protein [Methanosaeta
thermophila PT]
gi|116665469|gb|ABK14496.1| amino acid-binding ACT domain protein [Methanosaeta thermophila
PT]
Length = 222
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 31 ADILGIVVFVGNILGEYGINIAH---FHLGRSQSTEHAISFLCIDGSIL---NSVLEKLS 84
D G++ + ++ ++G NI + F L R + ++ I+G + ++E L
Sbjct: 10 EDRPGMLRDIAGVVADHGGNIVYTQQFVLDRGVNKGKGTVYMEIEGDVRGGIEGMVEALR 69
Query: 85 VNVTIRFVKQ 94
+ V
Sbjct: 70 SMPMVYEVTV 79
>gi|292670006|ref|ZP_06603432.1| acetoin utilization protein AcuB [Selenomonas noxia ATCC 43541]
gi|292648307|gb|EFF66279.1| acetoin utilization protein AcuB [Selenomonas noxia ATCC 43541]
Length = 214
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
G+ + I AD G++ + IL + INI S + I + D + +++V +
Sbjct: 140 GKTRLTIDVADRKGVLRDISTILADLDINIDSMVTIPQPSGAYQI-IIRADIADVDTVKD 198
Query: 82 KLSV 85
+L
Sbjct: 199 RLMA 202
>gi|284032950|ref|YP_003382881.1| Homoserine dehydrogenase [Kribbella flavida DSM 17836]
gi|283812243|gb|ADB34082.1| Homoserine dehydrogenase [Kribbella flavida DSM 17836]
Length = 435
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 5/67 (7%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNVT 88
D G++ V E+ ++I + + A + + ++ +E L
Sbjct: 365 DKAGVLAAVAQAFAEHDVSI--QTVRQEGRGGDAQLVVVTHTATDAALSTTVETLRDMDI 422
Query: 89 IRFVKQF 95
+R V
Sbjct: 423 VREVSSV 429
>gi|240014116|ref|ZP_04721029.1| homoserine dehydrogenase [Neisseria gonorrhoeae DGI18]
gi|240121678|ref|ZP_04734640.1| homoserine dehydrogenase [Neisseria gonorrhoeae PID24-1]
gi|240125744|ref|ZP_04738630.1| homoserine dehydrogenase [Neisseria gonorrhoeae SK-92-679]
gi|254493762|ref|ZP_05106933.1| homoserine dehydrogenase [Neisseria gonorrhoeae 1291]
gi|268684340|ref|ZP_06151202.1| homoserine dehydrogenase [Neisseria gonorrhoeae SK-92-679]
gi|226512802|gb|EEH62147.1| homoserine dehydrogenase [Neisseria gonorrhoeae 1291]
gi|268624624|gb|EEZ57024.1| homoserine dehydrogenase [Neisseria gonorrhoeae SK-92-679]
Length = 435
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 405 EKHIKSAIAAIEA 417
>gi|160903029|ref|YP_001568610.1| acetolactate synthase, small subunit [Petrotoga mobilis SJ95]
gi|160360673|gb|ABX32287.1| acetolactate synthase, small subunit [Petrotoga mobilis SJ95]
Length = 166
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 7/75 (9%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
++ + + ++ + + NI ++G ++ E++ + ++G+ V +
Sbjct: 3 HILSVTVNNQPSVLARISGLFSRRNFNILSLNVGETELPEYSRMTIVVEGNTDTLEQVKK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + + +
Sbjct: 63 QLYKLIDVIKITELN 77
>gi|49474061|ref|YP_032103.1| GTP pyrophosphokinase [Bartonella quintana str. Toulouse]
gi|49239565|emb|CAF25922.1| GTP pyrophosphokinase [Bartonella quintana str. Toulouse]
Length = 742
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 25/70 (35%), Gaps = 8/70 (11%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SVLEKLSVN 86
+ G + + ++ NI + R+ + + ID + + + +L
Sbjct: 675 NSPGSLAEITQVISANDANIQNLSFIRTAPD---FTEIMIDLEVWDLKHLNRIFSQLKEA 731
Query: 87 VTIRFVKQFE 96
++ V++
Sbjct: 732 GSVSAVRRVH 741
>gi|325204212|gb|ADY99665.1| homoserine dehydrogenase [Neisseria meningitidis M01-240355]
Length = 435
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 405 EKHIKSAIAAIEA 417
>gi|320093561|ref|ZP_08025452.1| prephenate dehydrogenase [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319979488|gb|EFW10959.1| prephenate dehydrogenase [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 392
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ ++ D G + + + LG G++I F L S + + + ID S + +E L
Sbjct: 325 LEVLIPDSPGEMGRLFSELGGAGVSIEDFVLEHSAGQQVGVGRIMIDPSAMERAVEVLEA 384
>gi|260775229|ref|ZP_05884127.1| acetolactate synthase small subunit [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608930|gb|EEX35092.1| acetolactate synthase small subunit [Vibrio coralliilyticus ATCC
BAA-450]
Length = 164
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + G + V + + G NI + + + + D L + +
Sbjct: 3 HIISLLMENQPGALSRVVGLFSQRGYNIESLTVSPTDDETLSRLNITTISDDMQLEQIQK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V++
Sbjct: 63 QLNKLIDVLKVQEVT 77
>gi|240128267|ref|ZP_04740928.1| homoserine dehydrogenase [Neisseria gonorrhoeae SK-93-1035]
gi|268686661|ref|ZP_06153523.1| homoserine dehydrogenase [Neisseria gonorrhoeae SK-93-1035]
gi|268626945|gb|EEZ59345.1| homoserine dehydrogenase [Neisseria gonorrhoeae SK-93-1035]
Length = 435
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 405 EKHIKSAIAAIEA 417
>gi|240080675|ref|ZP_04725218.1| homoserine dehydrogenase [Neisseria gonorrhoeae FA19]
gi|240115713|ref|ZP_04729775.1| homoserine dehydrogenase [Neisseria gonorrhoeae PID18]
gi|240118009|ref|ZP_04732071.1| homoserine dehydrogenase [Neisseria gonorrhoeae PID1]
gi|240123563|ref|ZP_04736519.1| homoserine dehydrogenase [Neisseria gonorrhoeae PID332]
gi|260440474|ref|ZP_05794290.1| homoserine dehydrogenase [Neisseria gonorrhoeae DGI2]
gi|268601388|ref|ZP_06135555.1| homoserine dehydrogenase [Neisseria gonorrhoeae PID18]
gi|268603717|ref|ZP_06137884.1| homoserine dehydrogenase [Neisseria gonorrhoeae PID1]
gi|268682188|ref|ZP_06149050.1| homoserine dehydrogenase [Neisseria gonorrhoeae PID332]
gi|268585519|gb|EEZ50195.1| homoserine dehydrogenase [Neisseria gonorrhoeae PID18]
gi|268587848|gb|EEZ52524.1| homoserine dehydrogenase [Neisseria gonorrhoeae PID1]
gi|268622472|gb|EEZ54872.1| homoserine dehydrogenase [Neisseria gonorrhoeae PID332]
Length = 435
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 405 EKHIKSAIAAIEA 417
>gi|254476958|ref|ZP_05090344.1| homoserine dehydrogenase [Ruegeria sp. R11]
gi|214031201|gb|EEB72036.1| homoserine dehydrogenase [Ruegeria sp. R11]
Length = 428
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 2/67 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNS 78
+ + D G + V LG G++I + + IL +
Sbjct: 346 PAPHYLRMSLQDKPGALAKVAAALGNAGVSIDRMRQYGHSEPTAPVLIVTHKCTSQILQT 405
Query: 79 VLEKLSV 85
LE L+
Sbjct: 406 ALEDLAK 412
>gi|218296480|ref|ZP_03497208.1| formyltetrahydrofolate deformylase [Thermus aquaticus Y51MC23]
gi|218243022|gb|EED09554.1| formyltetrahydrofolate deformylase [Thermus aquaticus Y51MC23]
Length = 285
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 14/50 (28%), Gaps = 1/50 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFL 69
+ + I D GIV V L +G NI +
Sbjct: 1 MEEARLLITCPDRPGIVAAVTGFLYAHGANITDLQQHSTDPEGGTFFMRV 50
>gi|156838425|ref|XP_001642918.1| hypothetical protein Kpol_411p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156113498|gb|EDO15060.1| hypothetical protein Kpol_411p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 469
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 30/74 (40%), Gaps = 7/74 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC---IDGSILNSVLE 81
+ ++ ++ G++ V N+L ++ NI + E A ++ S + + +
Sbjct: 399 RVLYIHKNVPGVLKTVNNVLSDH--NIEKQFS--DSNGEIAYLMADISNVNQSDIKDIYD 454
Query: 82 KLSVNVTIRFVKQF 95
+L+ ++
Sbjct: 455 RLNETSHKISIRLL 468
>gi|123442327|ref|YP_001006306.1| acetolactate synthase 1 regulatory subunit [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122089288|emb|CAL12135.1| putative acetolactate synthase small subunit [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 88
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKL 83
M+ + N G++ + + N+ E + +L + D L ++ +L
Sbjct: 1 MLTVRNH--PGVMSHICGLFARRAFNVDGILCMPLAGGEESRIWLQVLDDQRLQQMISQL 58
Query: 84 SVNVTIRFV 92
+ V
Sbjct: 59 EKLEDVLQV 67
>gi|170728902|ref|YP_001762928.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella woodyi
ATCC 51908]
gi|169814249|gb|ACA88833.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella woodyi ATCC 51908]
Length = 703
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF---LCIDGSIL-NSVLE 81
+ + + G + + +I+ G NI + L + + + I +V+
Sbjct: 631 LRVEIVNHQGALAKITSIVAAEGANIHN--LSTEERDGRVFLINLRISVTDRIHLANVMR 688
Query: 82 KLSVNVTIRF 91
++ V +
Sbjct: 689 RIRVLPEVLR 698
>gi|308809091|ref|XP_003081855.1| Acetolactate synthase, small subunit (ISS) [Ostreococcus tauri]
gi|116060322|emb|CAL55658.1| Acetolactate synthase, small subunit (ISS) [Ostreococcus tauri]
Length = 515
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + AD G++ V + G NI +G + + AI + + S V++ +
Sbjct: 79 HTILVYVADETGMINRVAGVFARRGYNIESLAVGLN--IDKAIFTISVICS-EEDVVKLM 135
Query: 84 SVNVTIRFVKQFE 96
+ V++ E
Sbjct: 136 KQVNKLAKVRKVE 148
>gi|86357023|ref|YP_468915.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase protein
[Rhizobium etli CFN 42]
gi|86281125|gb|ABC90188.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase protein
[Rhizobium etli CFN 42]
Length = 744
Score = 35.0 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEK 82
I + + G + V + +NI + R + + + + D LN +L +
Sbjct: 670 RIMVNALNEPGTLAKVAQTVAGLDVNIRMLNTVRVAADFTEMMLEVEVWDLRQLNQLLAQ 729
Query: 83 LSVNVTIRFVKQF 95
+ I V++
Sbjct: 730 MKELDCIATVRRL 742
>gi|227875337|ref|ZP_03993479.1| prephenate dehydrogenase [Mobiluncus mulieris ATCC 35243]
gi|227844242|gb|EEJ54409.1| prephenate dehydrogenase [Mobiluncus mulieris ATCC 35243]
Length = 414
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 25/61 (40%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
+I + D + ++ D G + + +G GINI F + S ++++
Sbjct: 332 RIPGKHGDAASNYGQVAVLVPDKPGFLGKLFQEIGAAGINIEDFRIEHSLGQSRGLAYIY 391
Query: 71 I 71
+
Sbjct: 392 V 392
>gi|291456079|ref|ZP_06595469.1| acetolactate synthase, small subunit [Bifidobacterium breve DSM
20213]
gi|291382488|gb|EFE90006.1| acetolactate synthase, small subunit [Bifidobacterium breve DSM
20213]
Length = 165
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 5/65 (7%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 30 NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVNV 87
+ G++ + + NI + ++ + + + ++ L ++++L+ +
Sbjct: 1 MENRPGVLARIAGLFARRAFNINSLSVSPTERPDISRVTVTADVEAVPLEQIIKQLNKLL 60
Query: 88 TIRFV 92
+ +
Sbjct: 61 HVLKI 65
>gi|209882034|ref|XP_002142454.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209558060|gb|EEA08105.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 1240
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
IV D L + ILG+Y INI ++ ++ + N ++ KL +
Sbjct: 992 IVYQDDLLGINKYSQILGDYYINITNYIEFNILIGGTSLYRWDV---PNNDIITKLIKLI 1048
Query: 88 -TIRFVKQFEFNV 99
K +F +
Sbjct: 1049 FNFDNCKPIKFEI 1061
>gi|257059051|ref|YP_003136939.1| aspartate kinase [Cyanothece sp. PCC 8802]
gi|256589217|gb|ACV00104.1| aspartate kinase [Cyanothece sp. PCC 8802]
Length = 599
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 8/81 (9%)
Query: 12 IQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS-------TEH 64
++ + D ++ + V D G+ + +L ++ I+I + +
Sbjct: 436 VRGVALDEKQAQIALIHVQ-DRPGMAASIFGVLADHNISIDTIIQSQRCRIVEGIPTRDI 494
Query: 65 AISFLCIDGSILNSVLEKLSV 85
A + ID + L+ L+
Sbjct: 495 AFTVAQIDVEAAQNALKTLAS 515
>gi|50541737|gb|AAT78347.1| RelA [Rhizobium etli]
Length = 744
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEK 82
I + + G + V + +NI + R + + + + D LN +L +
Sbjct: 670 RIMVNALNEPGTLAKVAQTVAGLDVNIRMLNTVRVAADFTEMMLEVEVWDLRQLNQLLAQ 729
Query: 83 LSVNVTIRFVKQF 95
+ I V++
Sbjct: 730 MKELDCIATVRRL 742
>gi|331090638|ref|ZP_08339489.1| hypothetical protein HMPREF9477_00132 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401078|gb|EGG80673.1| hypothetical protein HMPREF9477_00132 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 766
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKLSV 85
+ D G ++ + + E I++ + S+ + + I V EKL
Sbjct: 695 MYAMDRTGFLMEISKVFTENKIDVKSMNARTSKQGKVTLEIGFIVHGREELAKVAEKLRQ 754
Query: 86 NVTIRFV 92
+ +
Sbjct: 755 IDGVIDI 761
>gi|320594365|gb|ADW54434.1| RelA [Pseudomonas sp. DF41]
Length = 747
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEK 82
I I D G++ V +L IN+ + ++ A L I+ L+++ L +
Sbjct: 672 IAIRAYDRSGLLRDVSQVLLNERINVLAVNTRSNKEDNTATMQLTIEIPGLDALGRLLAR 731
Query: 83 LSVNVTIRFVK 93
+S I +
Sbjct: 732 VSQLPNIIEAR 742
>gi|319651680|ref|ZP_08005807.1| GTP pyrophosphokinase [Bacillus sp. 2_A_57_CT2]
gi|317396747|gb|EFV77458.1| GTP pyrophosphokinase [Bacillus sp. 2_A_57_CT2]
Length = 744
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 11/86 (12%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+E N +++I D G++ V + E NI+ GRS + A + I
Sbjct: 665 KEYNVEIEITGY-------DRRGLLNEVLQAVNETKTNISA-VSGRSDRNKSATINMSIA 716
Query: 73 -GSIL--NSVLEKLSVNVTIRFVKQF 95
++ V++++ I V++
Sbjct: 717 IHNVSHLQKVVDRIKQIPDIYAVRRI 742
>gi|260770800|ref|ZP_05879729.1| GTP pyrophosphokinase (p)ppGpp synthetase
II/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Vibrio furnissii CIP 102972]
gi|260614037|gb|EEX39227.1| GTP pyrophosphokinase (p)ppGpp synthetase
II/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Vibrio furnissii CIP 102972]
Length = 706
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 6/72 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI----DGSILNSVLE 81
+ + + G + + N++ G NI L + + D L ++
Sbjct: 633 LRVDMQNRQGALAELTNVISNTGSNIHG--LSTEERDGRLYTVTVSLTTKDRVHLAGIMR 690
Query: 82 KLSVNVTIRFVK 93
K+ V+
Sbjct: 691 KIRAMPNALKVR 702
>gi|89093538|ref|ZP_01166486.1| acetolactate synthase isozyme III small subunit [Oceanospirillum
sp. MED92]
gi|89082228|gb|EAR61452.1| acetolactate synthase isozyme III small subunit [Oceanospirillum
sp. MED92]
Length = 164
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 8/71 (11%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + G + V + + NI + ++ + + D ++ + +
Sbjct: 3 HIISVLMENEPGALSRVVGLFSQRNFNIESLTVAPTEDETLSRLTVTTIGDDRVVEQITK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 63 QLNKLIDVVKV 73
>gi|328856075|gb|EGG05198.1| hypothetical protein MELLADRAFT_88275 [Melampsora larici-populina
98AG31]
Length = 306
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILN 77
R ++ + + G++ V IL G NI + ++ E + + + +++
Sbjct: 103 PFNRHVLNCLVQNEPGVLSRVSGILAGRGFNIESLVVCATEIRELSRMCIVLKGQEAVVE 162
Query: 78 SVLEKLSVN 86
+L
Sbjct: 163 QARRQLEDL 171
>gi|325686797|gb|EGD28822.1| acetolactate synthase small subunit [Streptococcus sanguinis
SK72]
Length = 158
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G +++ E + + ID S L V + +
Sbjct: 4 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGTTENPEVSRITIIIDVSSLAEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ V+
Sbjct: 64 QLNRQIDVIRVRDIT 78
>gi|315178842|gb|ADT85756.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Vibrio furnissii
NCTC 11218]
Length = 706
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 6/72 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI----DGSILNSVLE 81
+ + + G + + N++ G NI L + + D L ++
Sbjct: 633 LRVDMQNRQGALAELTNVISNTGSNIHG--LSTEERDGRLYTVTVSLTTKDRVHLAGIMR 690
Query: 82 KLSVNVTIRFVK 93
K+ V+
Sbjct: 691 KIRAMPNALKVR 702
>gi|309807409|ref|ZP_07701372.1| alanine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
gi|308169331|gb|EFO71386.1| alanine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
Length = 632
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 1 VFSDG---KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVG-NILGEYGINIAHFHL 56
+F + K R ++I + + + G N D +G++ V + +G A
Sbjct: 403 LFGEKYHEKVRVVQINDFSIEFCGGTH---CENTDQIGMLKIVSESAIG------AGMRR 453
Query: 57 GRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
+ + + A + IL + +++
Sbjct: 454 IVAVTGQQAYEYAVKHDEILKEIQDEVKATK 484
>gi|308173286|ref|YP_003919991.1| formyltetrahydrofolate hydrolase [Bacillus amyloliquefaciens DSM
7]
gi|307606150|emb|CBI42521.1| formyltetrahydrofolate hydrolase [Bacillus amyloliquefaciens DSM
7]
gi|328553793|gb|AEB24285.1| formyltetrahydrofolate deformylase [Bacillus amyloliquefaciens
TA208]
gi|328911355|gb|AEB62951.1| formyltetrahydrofolate hydrolase [Bacillus amyloliquefaciens LL3]
Length = 300
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGIN-IAHFHLGRSQSTEHAISFL 69
++ + + + + + + D GIV V L E+G N I +
Sbjct: 8 RLNDYR-EGNEEKGRLLVSCPDQPGIVSAVSAFLFEHGANIIESNQYTTDPEGGRFFLRI 66
Query: 70 CIDGSILNSVLEKLSV 85
D + E L
Sbjct: 67 EFDCKGIREKKEDLKQ 82
>gi|302391002|ref|YP_003826822.1| acetolactate synthase, small subunit [Acetohalobium arabaticum
DSM 5501]
gi|302203079|gb|ADL11757.1| acetolactate synthase, small subunit [Acetohalobium arabaticum
DSM 5501]
Length = 160
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS--TEHAISFLCIDGSILNSVLE 81
+ ++ A+ G++ + ++ G NI +G +++ + D +L V +
Sbjct: 3 HTVSVLVANKSGVLARIASLFSRRGFNIDSLSVGTTENPTVSRITIVVEGDEHVLEQVTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V
Sbjct: 63 QLNKLIDVHKVSDIT 77
>gi|269139207|ref|YP_003295908.1| transcriptional regulator [Edwardsiella tarda EIB202]
gi|267984868|gb|ACY84697.1| transcriptional regulator [Edwardsiella tarda EIB202]
gi|304559119|gb|ADM41783.1| Transcriptional repressor protein TyrR [Edwardsiella tarda
FL6-60]
Length = 528
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 8/67 (11%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D +G+ + ++L I++ + ++F +D + ++ ++ +
Sbjct: 8 EDRIGLTRELLDLLAARNIDLRGIEI--DTIGRIYLNFNELDFEVFRQLMAEIRRISGVT 65
Query: 91 FVKQFEF 97
V+ F
Sbjct: 66 DVRTVPF 72
>gi|262377437|ref|ZP_06070660.1| GTP pyrophosphokinase [Acinetobacter lwoffii SH145]
gi|262307667|gb|EEY88807.1| GTP pyrophosphokinase [Acinetobacter lwoffii SH145]
Length = 769
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 12/97 (12%), Positives = 27/97 (27%), Gaps = 9/97 (9%)
Query: 8 RFIKIQEINFDVDIGRL-------MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ 60
+ E + D I + D G++ + ++ INI +
Sbjct: 669 MITQEPERAVEADWEMQPTRGQSVQIVVEAYDRRGLLKDLTQVIFSDQINIRQVNTISEA 728
Query: 61 STEHAISFLCIDGSILN--SVLEKLSVNVTIRFVKQF 95
+ L + +L +L I ++
Sbjct: 729 DGIANMKLLIEVKGLAQLSKLLARLEQQPGIISARRL 765
>gi|225428127|ref|XP_002280985.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 582
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D ++ + +L E +NI H S +++ +DG E+L
Sbjct: 186 HEITFSSDDKPKLLSQLTCLLSELELNIQEAHAF-STVDGYSLDVFVVDGWPYEET-EQL 243
Query: 84 S 84
Sbjct: 244 R 244
>gi|297744550|emb|CBI37812.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I + D ++ + +L E +NI H S +++ +DG E+L
Sbjct: 186 HEITFSSDDKPKLLSQLTCLLSELELNIQEAHAF-STVDGYSLDVFVVDGWPYEET-EQL 243
Query: 84 S 84
Sbjct: 244 R 244
>gi|118580968|ref|YP_902218.1| acetolactate synthase 3 regulatory subunit [Pelobacter
propionicus DSM 2379]
gi|118503678|gb|ABL00161.1| acetolactate synthase, small subunit [Pelobacter propionicus DSM
2379]
Length = 165
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ + G++ V + G NI ++ + + + D ++L + +
Sbjct: 5 HTISVLVENEFGVLARVAALFSGRGFNIDSLNVAPTNEEGLSRITIVTHGDENVLEQITK 64
Query: 82 KLSVNVTIRFV 92
+L+ V + V
Sbjct: 65 QLNKLVDVLKV 75
>gi|15643315|ref|NP_228359.1| acetolactate synthase 3 regulatory subunit [Thermotoga maritima
MSB8]
gi|148269515|ref|YP_001243975.1| acetolactate synthase 3 regulatory subunit [Thermotoga petrophila
RKU-1]
gi|170288189|ref|YP_001738427.1| acetolactate synthase, small subunit [Thermotoga sp. RQ2]
gi|281411767|ref|YP_003345846.1| acetolactate synthase, small subunit [Thermotoga naphthophila
RKU-10]
gi|4981064|gb|AAD35634.1|AE001730_2 acetolactate synthase, small subunit [Thermotoga maritima MSB8]
gi|147735059|gb|ABQ46399.1| acetolactate synthase, small subunit [Thermotoga petrophila
RKU-1]
gi|170175692|gb|ACB08744.1| acetolactate synthase, small subunit [Thermotoga sp. RQ2]
gi|281372870|gb|ADA66432.1| acetolactate synthase, small subunit [Thermotoga naphthophila
RKU-10]
Length = 171
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
++ ++ + G++ V N+ G NI+ +G S++ + + + G + +E+
Sbjct: 7 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKG--DDKTIEQ 64
Query: 83 LS----VNVTIRFVKQF 95
+ V + V
Sbjct: 65 IEKQAYKLVEVVKVTPI 81
>gi|320583160|gb|EFW97376.1| 3-phosphoglycerate dehydrogenase [Pichia angusta DL-1]
Length = 469
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 8/89 (8%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ ++ D + + + ++ ++ G++ V IL Y NI + A
Sbjct: 385 VSLRGLDLDQE-NVVRVLYIHQNVPGVLRTVNEILSSY--NIEKQFS--DSRGDIAYLMA 439
Query: 70 CIDGSILNSVL---EKLSVNVTIRFVKQF 95
I G L + EKL +
Sbjct: 440 DISGVNLQEIKSLYEKLENTPYKIITRLL 468
>gi|320114869|ref|YP_004185028.1| acetolactate synthase small subunit [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|319927960|gb|ADV78645.1| acetolactate synthase, small subunit [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 181
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + G++ V + G NI +G ++ + + L + D + V+
Sbjct: 16 HIISVLVNNHPGVLSRVVGLFSRRGYNIESLAVGTTEKEDISRITLTVEGDDYTVTQVIR 75
Query: 82 KLSVNVTIRFVKQF 95
+L+ V + V+
Sbjct: 76 QLNKLVDVLKVQNI 89
>gi|297527469|ref|YP_003669493.1| transcriptional regulator, AbrB family [Staphylothermus hellenicus
DSM 12710]
gi|297256385|gb|ADI32594.1| transcriptional regulator, AbrB family [Staphylothermus hellenicus
DSM 12710]
Length = 136
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 5/78 (6%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-----NSVL 80
+ I D G++ + L GI+I + E ++ +D S +
Sbjct: 58 LTIRVEDRPGVLAELTRELANKGIDIIATKCIVLKRGEMGECYMVVDLSRSLITNLRELE 117
Query: 81 EKLSVNVTIRFVKQFEFN 98
E L +R + E +
Sbjct: 118 EALQKLEPVREARAQEIH 135
>gi|284047546|ref|YP_003397885.1| acetolactate synthase, small subunit [Acidaminococcus fermentans
DSM 20731]
gi|283951767|gb|ADB46570.1| acetolactate synthase, small subunit [Acidaminococcus fermentans
DSM 20731]
Length = 179
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
M +VN + G++ V ++ INI ++G ++ E + L + + + +
Sbjct: 5 HMALLVN-NRPGVLSHVAGLIARRNINIECLNVGYTEIPEISRINLVVGVESRFQLDQAI 63
Query: 84 SVNVTIRFV-KQFEFN 98
+ V K +
Sbjct: 64 HQLSHLIDVIKVVNLD 79
>gi|238758630|ref|ZP_04619805.1| Acetolactate synthase, small subunit [Yersinia aldovae ATCC
35236]
gi|238703141|gb|EEP95683.1| Acetolactate synthase, small subunit [Yersinia aldovae ATCC
35236]
Length = 105
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC-IDGSILNSVLEKL 83
+ + + G++ + + N+ S E + +L +D L ++ +L
Sbjct: 16 TLVLTVRNHPGVMSHICGLFARRAFNVEGILCMPLASGEESRIWLQVVDDQRLLQMISQL 75
Query: 84 SVNVTIRFVK 93
+ V+
Sbjct: 76 EKLEDVLAVR 85
>gi|91793944|ref|YP_563595.1| sigma-54 factor, interaction region [Shewanella denitrificans
OS217]
gi|91715946|gb|ABE55872.1| transcriptional regulator, TyrR [Shewanella denitrificans OS217]
Length = 512
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D +G+ + IL YGIN+ + F I L ++ + ++
Sbjct: 8 IDRVGLAKDILVILERYGINLIAIDASN--RGFLYLQFAEISFETLRELMPLIRKVESVH 65
Query: 91 FVKQFEF 97
V+ F
Sbjct: 66 DVRTVSF 72
>gi|45656469|ref|YP_000555.1| homoserine dehydrogenase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599704|gb|AAS69192.1| homoserine dehydrogenase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 429
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
+V + R + D+ G++ + +LG++G++I+ + ++++ + + + I
Sbjct: 343 NVSLVRYYLRFTTVDLPGVLSEISKVLGDHGVSISS--VRQNETEKEPVEVVVITHPATE 400
Query: 78 SVLE-KLSVNVTIRFVK 93
++ L + + ++
Sbjct: 401 ESIKNSLKIIDGLSLIR 417
>gi|20806556|ref|NP_621727.1| acetolactate synthase small subunit [Thermoanaerobacter
tengcongensis MB4]
gi|20514995|gb|AAM23331.1| Acetolactate synthase, small subunit [Thermoanaerobacter
tengcongensis MB4]
Length = 167
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + G++ V + G NI +G ++ + + L + D + ++
Sbjct: 2 HIISVLVNNHPGVLSRVVGLFSRRGYNIESLAVGTTEREDISRITLTVLGDDYTVTQIIR 61
Query: 82 KLSVNVTIRFVKQF 95
+L+ V + V+
Sbjct: 62 QLNKLVDVIKVQNI 75
>gi|54023016|ref|YP_117258.1| homoserine dehydrogenase [Nocardia farcinica IFM 10152]
gi|54014524|dbj|BAD55894.1| putative homoserine dehydrogenase [Nocardia farcinica IFM 10152]
Length = 451
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 8/68 (11%), Positives = 24/68 (35%), Gaps = 5/68 (7%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NSVLEKLSVNV 87
D G++ V ++ ++I+ + + E A + ++ + L+
Sbjct: 378 EDRPGVLAKVAGEFAKHEVSIST--VRQEGHGEGARLVVVTHHAMESALADTVAALAEME 435
Query: 88 TIRFVKQF 95
++ V
Sbjct: 436 SVTSVTSV 443
>gi|254239285|ref|ZP_04932608.1| GTP pyrophosphokinase [Pseudomonas aeruginosa C3719]
gi|126171216|gb|EAZ56727.1| GTP pyrophosphokinase [Pseudomonas aeruginosa C3719]
Length = 747
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEK 82
I I D G++ V +L IN+ + ++ A L I+ L+++ L +
Sbjct: 672 IAIRAYDRSGLLRDVSQVLLNERINVLAVNTRSNKEDNTATMQLTIEIPGLDALGRLLAR 731
Query: 83 LSVNVTIRFVK 93
+S I +
Sbjct: 732 VSQLPNIIEAR 742
>gi|113970978|ref|YP_734771.1| PII uridylyl-transferase [Shewanella sp. MR-4]
gi|113885662|gb|ABI39714.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella sp. MR-4]
Length = 861
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 6/73 (8%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSV 79
G + + D + V +L IN+ A+ + L DG+
Sbjct: 673 GGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKDNYALDTFVILEQDGAP---- 728
Query: 80 LEKLSVNVTIRFV 92
+ +LS +IR
Sbjct: 729 VSQLSRIQSIRKA 741
>gi|117921258|ref|YP_870450.1| PII uridylyl-transferase [Shewanella sp. ANA-3]
gi|117613590|gb|ABK49044.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella sp. ANA-3]
Length = 861
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 6/73 (8%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSV 79
G + + D + V +L IN+ A+ + L DG+
Sbjct: 673 GGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKDNYALDTFVILEQDGAP---- 728
Query: 80 LEKLSVNVTIRFV 92
+ +LS +IR
Sbjct: 729 VSQLSRIQSIRKA 741
>gi|114048202|ref|YP_738752.1| PII uridylyl-transferase [Shewanella sp. MR-7]
gi|113889644|gb|ABI43695.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella sp. MR-7]
Length = 861
Score = 35.0 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 6/73 (8%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSV 79
G + + D + V +L IN+ A+ + L DG+
Sbjct: 673 GGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKDNYALDTFVILEQDGAP---- 728
Query: 80 LEKLSVNVTIRFV 92
+ +LS +IR
Sbjct: 729 VSQLSRIQSIRKA 741
>gi|315303282|ref|ZP_07873919.1| GTP diphosphokinase [Listeria ivanovii FSL F6-596]
gi|313628349|gb|EFR96845.1| GTP diphosphokinase [Listeria ivanovii FSL F6-596]
Length = 738
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ N D++I + G++ + I+ NI + + +
Sbjct: 659 NDYNVDIEIYGY-------NRNGLLNDILQIINSLTSNINGVNAKVDNNKMATLVVTLQI 711
Query: 73 GSIL--NSVLEKLSVNVTIRFVKQF 95
+I V++K+ + V++
Sbjct: 712 HNINHLQRVVDKIKQIPDVYTVRRL 736
>gi|113953978|ref|YP_729313.1| aspartate kinase [Synechococcus sp. CC9311]
gi|113881329|gb|ABI46287.1| asparate kinase, monofunctional class [Synechococcus sp. CC9311]
Length = 605
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVNA-DILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+G+P +++ + D + + + + D G+ + + L + GI++ Q
Sbjct: 425 GEGEP---EVRGVALDR--DQAQLSVRHVPDRPGMAGSLCSALADAGISLDAIVQSERQH 479
Query: 62 TEHAISFLCI----DGSILNSVLEKLSV 85
+ + I D + + L L
Sbjct: 480 GDGSRDISFIVKREDRAASDQALAPLLA 507
>gi|91773064|ref|YP_565756.1| amino acid-binding protein [Methanococcoides burtonii DSM 6242]
gi|91712079|gb|ABE52006.1| amino acid binding-domain protein [Methanococcoides burtonii DSM
6242]
Length = 167
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 22/58 (37%)
Query: 35 GIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
GI+ V ++ + I+I A+ + D + ++ ++ ++ V
Sbjct: 107 GILFSVSQVISNHNISIRQAVSDDPYFNSKAMLTIITDSKVPGDIVNEILQLPGVKGV 164
>gi|6319837|ref|NP_009918.1| Ilv6p [Saccharomyces cerevisiae S288c]
gi|3041696|sp|P25605|ILV6_YEAST RecName: Full=Acetolactate synthase small subunit, mitochondrial;
AltName: Full=Acetohydroxy-acid synthase small subunit;
Short=AHAS; Short=ALS; Flags: Precursor
gi|1907135|emb|CAA42350.1| acetolactate synthase, regulatory subunit [Saccharomyces
cerevisiae]
gi|285810688|tpg|DAA07472.1| TPA: Ilv6p [Saccharomyces cerevisiae S288c]
Length = 309
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLE 81
++ + + G++ V L G NI + ++ + + + + G ++
Sbjct: 78 HVLNCLVQNEPGVLSRVSGTLAARGFNIDSLVVCNTEVKDLSRMTIVLQGQDGVVEQARR 137
Query: 82 KLSVNVTIRFV 92
++ V + V
Sbjct: 138 QIEDLVPVYAV 148
>gi|84393463|ref|ZP_00992219.1| formyltetrahydrofolate deformylase [Vibrio splendidus 12B01]
gi|84375891|gb|EAP92782.1| formyltetrahydrofolate deformylase [Vibrio splendidus 12B01]
Length = 279
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 26/62 (41%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ + R + D G++ + NI ++ +NI H + ++ H ++G +
Sbjct: 1 MQMERKTLLTHCTDAPGLISKITNICYKHQLNIIHNNEFVDNTSGHFFMRTELEGYFNDE 60
Query: 79 VL 80
L
Sbjct: 61 TL 62
>gi|327439553|dbj|BAK15918.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Solibacillus silvestris StLB046]
Length = 731
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 22/108 (20%)
Query: 3 SDGKPRFIKI----------QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIA 52
R I++ ++ D++ I D GI+ V + + E NI
Sbjct: 632 DGNLERLIEVEWENDGTQIRKDYPVDIE-------ISAFDRPGILNDVMHAVSEAKTNIL 684
Query: 53 HFHLGRSQSTEHAISFLCID-GSIL--NSVLEKLSVNVTIRFV-KQFE 96
GR+ + A L I +I + V+EK+ I V +
Sbjct: 685 A-VTGRADREKIATIHLTIAITNISGLHRVVEKIKQLPDIYSVQRVIN 731
>gi|307946819|ref|ZP_07662154.1| homoserine dehydrogenase [Roseibium sp. TrichSKD4]
gi|307770483|gb|EFO29709.1| homoserine dehydrogenase [Roseibium sp. TrichSKD4]
Length = 437
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 22/75 (29%), Gaps = 7/75 (9%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS-----TEHAISFLCIDGSIL 76
G I + D G + + +GE GI++ R + + I
Sbjct: 348 GGYYIRLSVYDRPGHFAQIASSMGEKGISLESIVQRRESPRTEANGDEPQPVILITHETT 407
Query: 77 NSVLEKLSVNVTIRF 91
+++ I
Sbjct: 408 EQAVKE--ALEDILS 420
>gi|298242522|ref|ZP_06966329.1| acetolactate synthase, small subunit [Ktedonobacter racemifer DSM
44963]
gi|297555576|gb|EFH89440.1| acetolactate synthase, small subunit [Ktedonobacter racemifer DSM
44963]
Length = 188
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSV 79
+ + D G V V ++ N+ LGRS+ + + +D S + +
Sbjct: 29 QAHTLIALVQDRTGAVDRVVGLMRRRRANMQTLVLGRSEVDDVVRVTVSVDDSEVAVEHL 88
Query: 80 LEKLSVNVTIRFV 92
+E+L + +R V
Sbjct: 89 VEQLRKILDVRNV 101
>gi|291457741|ref|ZP_06597131.1| GTP diphosphokinase [Bifidobacterium breve DSM 20213]
gi|291380794|gb|EFE88312.1| GTP diphosphokinase [Bifidobacterium breve DSM 20213]
Length = 780
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LN++L + +
Sbjct: 700 DRRNLLSDVTRVLSDHGVNIISGTIATGSDRVATSQFSFEMADPQHLNTLLAAVRKIDGV 759
Query: 90 RFV 92
V
Sbjct: 760 FDV 762
>gi|169831237|ref|YP_001717219.1| aspartate kinase [Candidatus Desulforudis audaxviator MP104C]
gi|169638081|gb|ACA59587.1| aspartate kinase [Candidatus Desulforudis audaxviator MP104C]
Length = 410
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D GI + L IN+ + + + L+ LE + +
Sbjct: 269 EDRPGIASRIFRELARSNINV-DMIIQGAMRDGRNDIAFTVSRDDLSRALEAVHRIQGLV 327
Query: 91 FVKQFEFN 98
K FN
Sbjct: 328 GAKGITFN 335
>gi|170083883|ref|XP_001873165.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650717|gb|EDR14957.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 459
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 29/94 (30%), Gaps = 11/94 (11%)
Query: 10 IKIQEINFDVDIGRL----MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+ E++ +C V+ + G++ V + L Y N+ + E A
Sbjct: 370 VNFPEVDLRAITADHLTQIRVCHVHKNQPGVLKQVNDALSPY--NVEKQYS--DSKGEVA 425
Query: 66 ISFLCIDGSILNSVL---EKLSVNVTIRFVKQFE 96
I +L E++S +
Sbjct: 426 YLMADIADVSPADMLRLKERISGTDANIITRFLT 459
>gi|91772276|ref|YP_564968.1| amino acid-binding (ACT) protein [Methanococcoides burtonii DSM
6242]
gi|91711291|gb|ABE51218.1| Amino acid-binding domain protein [Methanococcoides burtonii DSM
6242]
Length = 145
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSI 75
++ + D+ G + + ++LGE INI A+ + R++ + I G++
Sbjct: 71 ETNVLGVEMEDVPGQLGMIADVLGEKNINIDYAYAFVTRTEKAFLIVRVNDIRGAV 126
>gi|148264430|ref|YP_001231136.1| metal dependent phosphohydrolase [Geobacter uraniireducens Rf4]
gi|146397930|gb|ABQ26563.1| metal dependent phosphohydrolase [Geobacter uraniireducens Rf4]
Length = 898
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
+VD G I D+ G+ + ++ G+NI + A+ L ++
Sbjct: 705 EVDKGYSNFTICTLDVPGLFSMITGVMAANGMNILGAQILT-SRNGKALDVLQVNSP 760
>gi|312868142|ref|ZP_07728346.1| acetolactate synthase, small subunit [Streptococcus parasanguinis
F0405]
gi|311096546|gb|EFQ54786.1| acetolactate synthase, small subunit [Streptococcus parasanguinis
F0405]
Length = 158
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G +++ + + ID + + V + +
Sbjct: 4 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGATENPNVSRITIIIDVTSHDEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ V+
Sbjct: 64 QLNRQVDVIRVRDIT 78
>gi|297616686|ref|YP_003701845.1| hypothetical protein Slip_0496 [Syntrophothermus lipocalidus DSM
12680]
gi|297144523|gb|ADI01280.1| CBS domain containing membrane protein [Syntrophothermus
lipocalidus DSM 12680]
Length = 217
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
D G + + NI+ + G NIA+ + L I S ++V+ +L
Sbjct: 152 DRPGELARIANIISDLGGNIANIVRIDLPGDDKVHLVLRITCSDPSAVVSRLKE 205
>gi|254469501|ref|ZP_05082906.1| formyltetrahydrofolate deformylase [Pseudovibrio sp. JE062]
gi|211961336|gb|EEA96531.1| formyltetrahydrofolate deformylase [Pseudovibrio sp. JE062]
Length = 285
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D GIV V + L G NI A+ R + + + +I + LE L+++ +
Sbjct: 14 DQPGIVSTVTSALASRGANIVEANQFCDRKTNQFFLRVAVRVPENIDKAALE-LAMSPAV 72
Query: 90 RFVK 93
K
Sbjct: 73 DRFK 76
>gi|41323484|gb|AAR99902.1| RelA [Agrobacterium tumefaciens]
Length = 744
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 8/74 (10%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SV 79
+ I + G + V + +NI ++ R S L +D + + +
Sbjct: 670 RVMINALNEPGTLASVAQSIATLDVNIRALNMVR---IGTDFSELALDVEVWDLRQLNQL 726
Query: 80 LEKLSVNVTIRFVK 93
L +L + VK
Sbjct: 727 LSQLKDLDCVSTVK 740
>gi|15596131|ref|NP_249625.1| GTP pyrophosphokinase [Pseudomonas aeruginosa PAO1]
gi|107100390|ref|ZP_01364308.1| hypothetical protein PaerPA_01001415 [Pseudomonas aeruginosa PACS2]
gi|116048857|ref|YP_792342.1| GTP pyrophosphokinase [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893097|ref|YP_002441966.1| GTP pyrophosphokinase [Pseudomonas aeruginosa LESB58]
gi|254245218|ref|ZP_04938540.1| GTP pyrophosphokinase [Pseudomonas aeruginosa 2192]
gi|296390712|ref|ZP_06880187.1| GTP pyrophosphokinase [Pseudomonas aeruginosa PAb1]
gi|313105818|ref|ZP_07792081.1| GTP pyrophosphokinase [Pseudomonas aeruginosa 39016]
gi|9946839|gb|AAG04323.1|AE004528_1 GTP pyrophosphokinase [Pseudomonas aeruginosa PAO1]
gi|115584078|gb|ABJ10093.1| GTP pyrophosphokinase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126198596|gb|EAZ62659.1| GTP pyrophosphokinase [Pseudomonas aeruginosa 2192]
gi|218773325|emb|CAW29137.1| GTP pyrophosphokinase [Pseudomonas aeruginosa LESB58]
gi|310878583|gb|EFQ37177.1| GTP pyrophosphokinase [Pseudomonas aeruginosa 39016]
Length = 747
Score = 35.0 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEK 82
I I D G++ V +L IN+ + ++ A L I+ L+++ L +
Sbjct: 672 IAIRAYDRSGLLRDVSQVLLNERINVLAVNTRSNKEDNTATMQLTIEIPGLDALGRLLAR 731
Query: 83 LSVNVTIRFVK 93
+S I +
Sbjct: 732 VSQLPNIIEAR 742
>gi|308069495|ref|YP_003871100.1| Prephenate dehydrogenase (PDH) [Paenibacillus polymyxa E681]
gi|305858774|gb|ADM70562.1| Prephenate dehydrogenase (PDH) [Paenibacillus polymyxa E681]
Length = 362
Score = 35.0 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHL 56
+ I D GI+ + LG + IN+++ +
Sbjct: 295 LYIDVPDTPGIIGRIAMELGNHSINLSNMQI 325
>gi|262402341|ref|ZP_06078902.1| transcriptional repressor protein TyrR [Vibrio sp. RC586]
gi|262351123|gb|EEZ00256.1| transcriptional repressor protein TyrR [Vibrio sp. RC586]
Length = 513
Score = 35.0 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + ++ ID + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEI--DVIGIIYLNCPDIDFETFSELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|262165561|ref|ZP_06033298.1| transcriptional repressor protein TyrR [Vibrio mimicus VM223]
gi|262025277|gb|EEY43945.1| transcriptional repressor protein TyrR [Vibrio mimicus VM223]
Length = 513
Score = 35.0 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + ++ ID + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEI--DVIGIIYLNCPDIDFETFSELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|257386929|ref|YP_003176702.1| amino acid-binding ACT domain protein [Halomicrobium mukohataei DSM
12286]
gi|257169236|gb|ACV46995.1| amino acid-binding ACT domain protein [Halomicrobium mukohataei DSM
12286]
Length = 175
Score = 35.0 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 27/68 (39%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ + NA+ GIV V + + ++ I I + T+ ++ D + ++ +
Sbjct: 105 TVAVSNAEESGIVAAVTDAIADHDITIRQVISEDPEFTDDPRLYVITDEAFPGELITDIK 164
Query: 85 VNVTIRFV 92
+ +
Sbjct: 165 ALPFVHRI 172
>gi|152985899|ref|YP_001349924.1| GTP pyrophosphokinase [Pseudomonas aeruginosa PA7]
gi|150961057|gb|ABR83082.1| GTP pyrophosphokinase [Pseudomonas aeruginosa PA7]
Length = 747
Score = 35.0 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEK 82
I I D G++ V +L IN+ + ++ A L I+ L+++ L +
Sbjct: 672 IAIRAYDRSGLLRDVSQVLLNERINVLAVNTRSNKEDNTATMQLTIEIPGLDALGRLLAR 731
Query: 83 LSVNVTIRFVK 93
+S I +
Sbjct: 732 VSQLPNIIEAR 742
>gi|307265426|ref|ZP_07546982.1| acetolactate synthase, small subunit [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306919540|gb|EFN49758.1| acetolactate synthase, small subunit [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 181
Score = 35.0 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + G++ V + G NI +G ++ + + L + D + V+
Sbjct: 16 HIISVLVNNYPGVLSRVVGLFSRRGYNIESLAVGTTEKEDISRITLTVEGDDYTVTQVIR 75
Query: 82 KLSVNVTIRFVKQF 95
+L+ + + V+
Sbjct: 76 QLNKLIDVLKVQNI 89
>gi|172035544|ref|YP_001802045.1| acetolactate synthase 3 regulatory subunit [Cyanothece sp. ATCC
51142]
gi|171696998|gb|ACB49979.1| acetolactate synthase small subunit [Cyanothece sp. ATCC 51142]
Length = 181
Score = 35.0 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + D S + + +
Sbjct: 11 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQPGISRITMVVPGDDSTIEQLTK 70
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V
Sbjct: 71 QLYKLINVLKVNDIT 85
>gi|159904621|ref|YP_001548283.1| hypothetical protein MmarC6_0230 [Methanococcus maripaludis C6]
gi|159886114|gb|ABX01051.1| ACT domain-containing protein [Methanococcus maripaludis C6]
Length = 90
Score = 35.0 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SVL 80
I +V D GIV V IL E+G NIA + I + I + L
Sbjct: 6 ITVVGVDKPGIVAAVTKILAEHGANIADIRQTIMEDLFTMIMLVDISKLNSDLSELNVAL 65
Query: 81 EKLSVNVTIR 90
EKL + ++
Sbjct: 66 EKLGSEIGVK 75
>gi|119963797|ref|YP_947436.1| prephenate dehydrogenase [Arthrobacter aurescens TC1]
gi|119950656|gb|ABM09567.1| prephenate dehydrogenase [Arthrobacter aurescens TC1]
Length = 368
Score = 35.0 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 25/58 (43%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I+ D G + + +GE G+N+ L S + L + S + ++E L
Sbjct: 302 LTILVDDKPGQIAHLLTEIGEIGVNLEDLRLDHSSGQNVGMVELSVLPSKHDLLVEAL 359
>gi|78043672|ref|YP_359332.1| prephenate dehydrogenase [Carboxydothermus hydrogenoformans Z-2901]
gi|77995787|gb|ABB14686.1| prephenate dehydrogenase [Carboxydothermus hydrogenoformans Z-2901]
Length = 360
Score = 35.0 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 7/38 (18%), Positives = 17/38 (44%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ D G++ V +L + INI + +++ +
Sbjct: 292 LTANIPDRPGMLAKVTGLLARFNINIKDIEILKAREGD 329
>gi|227832015|ref|YP_002833722.1| aspartate kinase [Corynebacterium aurimucosum ATCC 700975]
gi|262184129|ref|ZP_06043550.1| aspartate kinase [Corynebacterium aurimucosum ATCC 700975]
gi|227453031|gb|ACP31784.1| aspartate kinase [Corynebacterium aurimucosum ATCC 700975]
Length = 421
Score = 35.0 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 20/64 (31%), Gaps = 6/64 (9%)
Query: 27 CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-----DGSILNSVLE 81
+ D G V + + INI L S E + + DG +L
Sbjct: 269 VLGIPDRPGEAAKVFRAIADAEINI-DMVLQNVSSLESGTTDITFTCPRSDGPKAMEILA 327
Query: 82 KLSV 85
KL
Sbjct: 328 KLKE 331
>gi|212638438|ref|YP_002314958.1| acetolactate synthase 3 regulatory subunit [Anoxybacillus
flavithermus WK1]
gi|212559918|gb|ACJ32973.1| Acetolactate synthase small subunit [Anoxybacillus flavithermus
WK1]
Length = 173
Score = 35.0 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
+I + + G++ + + + NI +G ++S + + D I + +
Sbjct: 5 IITMTVNNRPGVLNRITGLFTKRHYNIESITVGHTESEGISRMTFVVNVEDERIAEQITK 64
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 65 QLNKQIDVLKV 75
>gi|87121150|ref|ZP_01077041.1| fructokinase [Marinomonas sp. MED121]
gi|86163642|gb|EAQ64916.1| fructokinase [Marinomonas sp. MED121]
Length = 326
Score = 35.0 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
+ V D G + + L +YG+NI + ++ T A L DG
Sbjct: 51 NSHFVGQVGEDSFGRF--LADCLADYGVNIENMRFSQAAKTALAFVSLDSDGE 101
>gi|84684930|ref|ZP_01012830.1| acetolactate synthase small subunit [Maritimibacter alkaliphilus
HTCC2654]
gi|84667265|gb|EAQ13735.1| acetolactate synthase small subunit [Rhodobacterales bacterium
HTCC2654]
Length = 187
Score = 35.0 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 5/81 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ ++ + G++ V + G NI + T H + G +V+E
Sbjct: 27 ETHTLAVIVDNEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGHQSRITIVTGGTP-AVIE 85
Query: 82 KLSV----NVTIRFVKQFEFN 98
++ V + V
Sbjct: 86 QIKAQLGRIVPVHRVHDLTVE 106
>gi|254470736|ref|ZP_05084139.1| ACT domain protein [Pseudovibrio sp. JE062]
gi|211959878|gb|EEA95075.1| ACT domain protein [Pseudovibrio sp. JE062]
Length = 177
Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 22/62 (35%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ +V D G+V + ++ ++ N L R I + +D + + L
Sbjct: 7 LTVVADDRPGLVGEISKVVADHKANWIDSSLSRLGGQFAGIVRVHVDKAQAADLSAALIK 66
Query: 86 NV 87
Sbjct: 67 LE 68
>gi|171463934|ref|YP_001798047.1| chorismate mutase [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|171193472|gb|ACB44433.1| chorismate mutase [Polynucleobacter necessarius subsp. necessarius
STIR1]
Length = 359
Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 30/88 (34%), Gaps = 3/88 (3%)
Query: 5 GKPRFIKIQEINFDVDIGRLM-ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
+ RF+ + + + + G V + L ++G+++ F ++
Sbjct: 258 NRTRFVVVGNYACQSTGKDQTSLVLSVGNQPGAVHRLLAPLAKHGVSMNRFESRPARKGT 317
Query: 64 HAISF-LCIDGSILNS-VLEKLSVNVTI 89
F + I G + V + L +
Sbjct: 318 WEYHFYIDIAGHTDDDKVAKALEELKGV 345
>gi|302391840|ref|YP_003827660.1| homoserine dehydrogenase [Acetohalobium arabaticum DSM 5501]
gi|302203917|gb|ADL12595.1| homoserine dehydrogenase [Acetohalobium arabaticum DSM 5501]
Length = 429
Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 7/69 (10%), Positives = 27/69 (39%), Gaps = 6/69 (8%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVN 86
D G++ V +I G+ ++I + + + + + + + + L+++
Sbjct: 358 IDEPGVLASVSSIFGKNNVSIES--VIQKGKIDKTVPLVLVTHQVTEGDIQTALKEIKEL 415
Query: 87 VTIRFVKQF 95
++ +
Sbjct: 416 DEVKELSSL 424
>gi|294648991|ref|ZP_06726439.1| homoserine dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
gi|292825126|gb|EFF83881.1| homoserine dehydrogenase [Acinetobacter haemolyticus ATCC 19194]
Length = 437
Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
I + D G++ V IL GI+I I L I S ++ L
Sbjct: 355 GYYIRLNAEDQTGVLADVTAILSRAGISIDAIMQQSRLKDLIPIVILTDPIVESKMDEAL 414
Query: 81 EKLSVNVTIR 90
++ I
Sbjct: 415 AQIQALPAIH 424
>gi|284167359|ref|YP_003405637.1| threonine dehydratase [Haloterrigena turkmenica DSM 5511]
gi|284017014|gb|ADB62964.1| threonine dehydratase [Haloterrigena turkmenica DSM 5511]
Length = 408
Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 7/76 (9%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST---EHAISFLCIDG---SILNS 78
+ + D G + I+ +G+NI RS A I+ N
Sbjct: 330 RLRVRITDNPGKMADTSEIIASHGVNIHDVSHERSVKELNVGEAYLDFRIETNGADQTNR 389
Query: 79 VLEKLSVNVTIR-FVK 93
V++ L V+
Sbjct: 390 VIDSLREEGYTVARVR 405
>gi|237653243|ref|YP_002889557.1| homoserine dehydrogenase [Thauera sp. MZ1T]
gi|237624490|gb|ACR01180.1| Homoserine dehydrogenase [Thauera sp. MZ1T]
Length = 435
Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 9/88 (10%), Positives = 29/88 (32%), Gaps = 5/88 (5%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
+ + + + D G++ + IL + GI+I ++ E + +
Sbjct: 346 PIEEVVTSYYLRMRVEDKPGVLADITRILADSGISIEALIQKQAAEGEAHTDIIMLTHQT 405
Query: 76 LN----SVLEKLSVNVTIR-FVKQFEFN 98
+ + ++ ++ V +
Sbjct: 406 AEKNANAAIVRIEALPVVQGKVVKLRME 433
>gi|241205494|ref|YP_002976590.1| acetolactate synthase 3 regulatory subunit [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240859384|gb|ACS57051.1| acetolactate synthase, small subunit [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 190
Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ + ++ + G++ V + G NI + + +S + +
Sbjct: 19 AAVESHTLSVLVDNEPGVLARVIGLFSGRGYNIESLTVS-ETEHQAHLSRITVVTRGTPQ 77
Query: 79 VLEKLSV-NVTIRFV-KQFEFNV 99
VLE++ I V + + V
Sbjct: 78 VLEQIKAQLERIVPVHRVVDLTV 100
>gi|330508443|ref|YP_004384871.1| prephenate dehydratase [Methanosaeta concilii GP-6]
gi|328929251|gb|AEB69053.1| prephenate dehydratase [Methanosaeta concilii GP-6]
Length = 272
Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 26/73 (35%), Gaps = 5/73 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST-EHAISFLCI----DGSILNSV 79
++ + D G + + + IN+ S+ ++ + D S++
Sbjct: 192 LVIHLAKDRPGALYSILQEFAQRSINLTRIESRPSRRGLGDYYFYIDLEGHQDNSVVLDA 251
Query: 80 LEKLSVNVTIRFV 92
LEK+ + V
Sbjct: 252 LEKIREKAGMVKV 264
>gi|329769813|ref|ZP_08261214.1| L-serine dehydratase [Gemella sanguinis M325]
gi|328838175|gb|EGF87793.1| L-serine dehydratase [Gemella sanguinis M325]
Length = 222
Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 11/95 (11%), Positives = 28/95 (29%), Gaps = 7/95 (7%)
Query: 3 SDGKPRFIKIQEINFDVDIGRLMICIVN----ADILGIVVFVGNILGEYGINIAHFHLGR 58
GK ++ + ++ I + + + I GE +++ +
Sbjct: 126 GGGKMVIFELLGFDVNISGDFPSYFIFYNFNEKNKEDLSKNIDEIFGEKKVSV---NYSS 182
Query: 59 SQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVK 93
S ++ + + L K I +K
Sbjct: 183 SILEGANLAVVEALDELDKETLNKFDKLEYINEIK 217
>gi|302559458|ref|ZP_07311800.1| aspartate kinase, monofunctional class [Streptomyces griseoflavus
Tu4000]
gi|302477076|gb|EFL40169.1| aspartate kinase, monofunctional class [Streptomyces griseoflavus
Tu4000]
Length = 425
Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 7/69 (10%), Positives = 18/69 (26%), Gaps = 3/69 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKLSVNVTI 89
D G + + INI + + ++ + ++ L N
Sbjct: 277 DKPGEAASIFRTIANAEINI-DMVVQNVSAASTGLTDISFTLPKTEGRKAIDALEKNKGT 335
Query: 90 RFVKQFEFN 98
++
Sbjct: 336 IGFDSLRYD 344
>gi|163793356|ref|ZP_02187331.1| Acetolactate synthase [alpha proteobacterium BAL199]
gi|159181158|gb|EDP65673.1| Acetolactate synthase [alpha proteobacterium BAL199]
Length = 191
Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
D+ I R I ++ A+ G++ V + G NI + A S + + S
Sbjct: 5 DMPIERHTIAVLVANEPGVLARVIGLFSGRGYNIESLTVSEVDEAN-ARSRITVVTSGTP 63
Query: 78 SVLEKLSV 85
V+E++
Sbjct: 64 MVIEQIKA 71
>gi|320537941|ref|ZP_08037848.1| hypothetical protein HMPREF9554_02603 [Treponema phagedenis
F0421]
gi|320145194|gb|EFW36903.1| hypothetical protein HMPREF9554_02603 [Treponema phagedenis
F0421]
Length = 56
Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 44 LGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE-KLSVNVTIRFVKQFE 96
+ E G+N+ F L R + AI L +DG LN L+ + ++ V +
Sbjct: 1 MAEQGLNVYKFDLARDKRGGTAIMSLQVDGINLNHTLQSTIEQIENVQKVILIQ 54
>gi|320354276|ref|YP_004195615.1| prephenate dehydratase [Desulfobulbus propionicus DSM 2032]
gi|320122778|gb|ADW18324.1| prephenate dehydratase [Desulfobulbus propionicus DSM 2032]
Length = 561
Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI-LNSVLEKLSVNV 87
D +GI+V + N GINI ++ +L +G + + ++
Sbjct: 200 DDRVGILVDILNEFSRRGINIVDMRTENDIKSQKLRIYLEAEGHVGSERMASAIAHIE 257
>gi|254440688|ref|ZP_05054181.1| Homoserine dehydrogenase, NAD binding domain family [Octadecabacter
antarcticus 307]
gi|198250766|gb|EDY75081.1| Homoserine dehydrogenase, NAD binding domain family [Octadecabacter
antarcticus 307]
Length = 429
Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ + D G + V +LG+ G++I + + + L + + +
Sbjct: 344 AIPAPYYLRMQLVDKPGALAKVAAVLGDAGVSIDRMK--QYGHADTSAPVLIVTHKVTRT 401
Query: 79 VLEK 82
L++
Sbjct: 402 ALDE 405
>gi|239826686|ref|YP_002949310.1| amino acid-binding ACT domain protein [Geobacillus sp. WCH70]
gi|239806979|gb|ACS24044.1| amino acid-binding ACT domain protein [Geobacillus sp. WCH70]
Length = 263
Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 29 VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
++ + G++ V ++LG INI + R +
Sbjct: 12 IHINRPGLLGDVASLLGMLSINIVTINGVRDSRRGMLL 49
>gi|15902446|ref|NP_357996.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae R6]
gi|182683410|ref|YP_001835157.1| acetolactate synthase small subunit [Streptococcus pneumoniae
CGSP14]
gi|15457965|gb|AAK99206.1| Acetolactate synthase small subunit [Streptococcus pneumoniae R6]
gi|182628744|gb|ACB89692.1| acetolactate synthase small subunit [Streptococcus pneumoniae
CGSP14]
Length = 166
Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G ++ + + ID + + V + +
Sbjct: 12 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGATEDPNVSRITIIIDVASHDEVEQIIK 71
Query: 85 VNV---TIRFVKQFE 96
+ ++
Sbjct: 72 QLNRQIDVIRIRDIT 86
>gi|320594209|gb|EFX06612.1| mitochondrial acetolactate synthase small [Grosmannia clavigera
kw1407]
Length = 325
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSIL 76
R ++ + + G++ V IL G NI + ++ + + + + ++
Sbjct: 89 APAKRHILNCLVQNEPGVLSRVSGILAARGFNIDSLVVCSTEVVDLSRMTIVLTGQDGVV 148
Query: 77 NSVLEKLSVN 86
+L
Sbjct: 149 EQARRQLEDL 158
>gi|312137923|ref|YP_004005259.1| aspartate kinase [Rhodococcus equi 103S]
gi|325673282|ref|ZP_08152974.1| aspartate kinase 2 [Rhodococcus equi ATCC 33707]
gi|311887262|emb|CBH46573.1| aspartate kinase [Rhodococcus equi 103S]
gi|325555872|gb|EGD25542.1| aspartate kinase 2 [Rhodococcus equi ATCC 33707]
Length = 421
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 3/69 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKLSVNVTI 89
D G V + E INI L E + + + +EKL+ +
Sbjct: 274 DTPGHAAKVFRAIAEAEINI-DMVLQNISKVETGKTDITFTLPKADGPRAVEKLTALQSE 332
Query: 90 RFVKQFEFN 98
Q F+
Sbjct: 333 IDFTQILFD 341
>gi|229820639|ref|YP_002882165.1| Prephenate dehydrogenase [Beutenbergia cavernae DSM 12333]
gi|229566552|gb|ACQ80403.1| Prephenate dehydrogenase [Beutenbergia cavernae DSM 12333]
Length = 388
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLG---RSQSTEHAISFLCIDGSILNSVLEK 82
D G + + +GE G+NI F + R + +S L + L L++
Sbjct: 327 DRPGELGRLFGEVGEIGVNIEDFQMEHAPRQRVGMAVLSVLPASVTPLEEALQE 380
>gi|115524943|ref|YP_781854.1| homoserine dehydrogenase [Rhodopseudomonas palustris BisA53]
gi|115518890|gb|ABJ06874.1| homoserine dehydrogenase [Rhodopseudomonas palustris BisA53]
Length = 439
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
+ G I ++ D+ G + L E GI+I + R + +
Sbjct: 342 PMERHEGGYYIRLMARDLPGTAATIATRLAEQGISIESI-VQRHPDGNRDVGAGNKSQPV 400
Query: 76 LNSVLEKLSVNVTIRFV 92
++ + +R
Sbjct: 401 PVILITYATSEDAVRRA 417
>gi|318078004|ref|ZP_07985336.1| prephenate dehydrogenase [Streptomyces sp. SA3_actF]
Length = 385
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 25/75 (33%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
++ + I ++ +D G + + G G+NI + + + + L
Sbjct: 283 RVPGKHGSTPAAYETIAVLISDRPGELARIFADAGRAGVNIEDVRIEHATGQQAGLVQLS 342
Query: 71 IDGSILNSVLEKLSV 85
+ + + L
Sbjct: 343 VAPEAASGLAAALRE 357
>gi|262171659|ref|ZP_06039337.1| transcriptional repressor protein TyrR [Vibrio mimicus MB-451]
gi|261892735|gb|EEY38721.1| transcriptional repressor protein TyrR [Vibrio mimicus MB-451]
Length = 513
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + ++ ID + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEI--DVIGIIYLNCPDIDFETFSELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|258621594|ref|ZP_05716627.1| transcriptional regulator TyrR [Vibrio mimicus VM573]
gi|258586212|gb|EEW10928.1| transcriptional regulator TyrR [Vibrio mimicus VM573]
Length = 513
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + ++ ID + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEI--DVIGIIYLNCPDIDFETFSELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|258627605|ref|ZP_05722382.1| transcriptional regulator TyrR [Vibrio mimicus VM603]
gi|258580187|gb|EEW05159.1| transcriptional regulator TyrR [Vibrio mimicus VM603]
Length = 513
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + ++ ID + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEI--DVIGIIYLNCPDIDFETFSELMAEIRRIPGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|291288157|ref|YP_003504973.1| Radical SAM domain protein [Denitrovibrio acetiphilus DSM 12809]
gi|290885317|gb|ADD69017.1| Radical SAM domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 593
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 30/95 (31%), Gaps = 17/95 (17%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH--- 64
R I+ + + + ++ D G + +I G N+ + +
Sbjct: 314 RIIE----RTEASVEKEVL--RFIDKKGWNGIINDI-GGPTANMYGMECRKKKDQGRCAD 366
Query: 65 -------AISFLCIDGSILNSVLEKLSVNVTIRFV 92
L +D NS+L ++ I+ V
Sbjct: 367 KRCMYPSICPSLSVDHRFTNSLLSRIRKLDGIKRV 401
>gi|260905482|ref|ZP_05913804.1| aspartate kinase [Brevibacterium linens BL2]
Length = 424
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 23/68 (33%), Gaps = 6/68 (8%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SVLEKLSVN 86
D+ G + N + INI + + E + + + + L+ + +
Sbjct: 276 DVPGKAAEIFNTMAATEINI-DMIVQNISTREPGKTDISFTLPMDDGAKALEALDAVKAS 334
Query: 87 VTIRFVKQ 94
+ V+
Sbjct: 335 IGFDQVRY 342
>gi|327310447|ref|YP_004337344.1| threonine dehydratase [Thermoproteus uzoniensis 768-20]
gi|326946926|gb|AEA12032.1| threonine dehydratase [Thermoproteus uzoniensis 768-20]
Length = 403
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCIDGSILNSVLEKLSVNVTIR 90
D G++ ++L ++G+NI + R + L I + L +
Sbjct: 336 DRPGMLAAAASVLAKHGVNIIDVYHERYDPHQRPNYVELVFVTEIPGDL--DLGAVLKDL 393
Query: 91 FVKQFEFN 98
K F+F+
Sbjct: 394 EAKGFKFD 401
>gi|297579496|ref|ZP_06941424.1| formyltetrahydrofolate deformylase [Vibrio cholerae RC385]
gi|297537090|gb|EFH75923.1| formyltetrahydrofolate deformylase [Vibrio cholerae RC385]
Length = 277
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + + +D G++ + NI ++ +NI H + ++ H ++G ++ L
Sbjct: 1 MEKKTLLTHCSDAPGLISKITNICYKHQLNIIHNNEFVDNASGHFFMRTELEGYFNDATL 60
Query: 81 EKLSVNVTIR 90
L+
Sbjct: 61 --LADLDHAL 68
>gi|255007590|ref|ZP_05279716.1| GTP pyrophosphokinase [Bacteroides fragilis 3_1_12]
gi|313145283|ref|ZP_07807476.1| GTP pyrophosphokinase [Bacteroides fragilis 3_1_12]
gi|313134050|gb|EFR51410.1| GTP pyrophosphokinase [Bacteroides fragilis 3_1_12]
Length = 748
Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEY-GINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKL 83
I + D +G++ + ++ +NI + + L + D + ++ L
Sbjct: 675 IYVKGIDNVGLLNEITQVISRQLNVNIRKLDMETNDGIFEGKVQLYVHDVEDVKAICNNL 734
Query: 84 SVNVTIRFVKQFE 96
I+ V + E
Sbjct: 735 RKIPNIKSVTRVE 747
>gi|283852727|ref|ZP_06369992.1| formyltetrahydrofolate deformylase [Desulfovibrio sp. FW1012B]
gi|283571905|gb|EFC19900.1| formyltetrahydrofolate deformylase [Desulfovibrio sp. FW1012B]
Length = 285
Score = 35.0 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 17/62 (27%), Gaps = 1/62 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+CI D GIV V L +G NI L ++ L
Sbjct: 6 RLCITCPDRPGIVSAVTTFLYTHGANIIDLDQHSTDPEGGTFFLRLEFYTPYMDVSRSAL 65
Query: 84 SV 85
Sbjct: 66 EA 67
>gi|255720248|ref|XP_002556404.1| KLTH0H12342p [Lachancea thermotolerans]
gi|238942370|emb|CAR30542.1| KLTH0H12342p [Lachancea thermotolerans]
Length = 301
Score = 35.0 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 8/71 (11%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLE 81
++ + + G++ + L G NI + ++ + + + + G ++
Sbjct: 72 HVLNCLVQNEPGVLSRISGTLAARGFNIDSLVVCNTEVKDLSRMTIVLQGQDGVIEQARR 131
Query: 82 KLSVNVTIRFV 92
++ V + V
Sbjct: 132 QIEDLVPVYAV 142
>gi|227819894|ref|YP_002823865.1| formyltetrahydrofolate deformylase [Sinorhizobium fredii NGR234]
gi|36958741|gb|AAQ87209.1| Formyltetrahydrofolate deformylase [Sinorhizobium fredii NGR234]
gi|227338893|gb|ACP23112.1| formyltetrahydrofolate deformylase [Sinorhizobium fredii NGR234]
Length = 283
Score = 35.0 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIA--HFHLGRSQS 61
+ + D GIV V L G NIA + R +
Sbjct: 2 PSNFTLTLSCEDRPGIVAAVTTELAACGANIAESNQFWDRQSN 44
>gi|325262063|ref|ZP_08128801.1| homoserine dehydrogenase [Clostridium sp. D5]
gi|324033517|gb|EGB94794.1| homoserine dehydrogenase [Clostridium sp. D5]
Length = 432
Score = 35.0 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 8/69 (11%), Positives = 27/69 (39%), Gaps = 6/69 (8%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVN 86
+ G++ + + G++ ++IA + + T++ + + + L +L
Sbjct: 362 KNQPGVLACIAQVFGDHKVSIA--RVVQKHVTDNQAELVIVTEKVKEYHLQDALRELKEM 419
Query: 87 VTIRFVKQF 95
+I +
Sbjct: 420 ESILEISSV 428
>gi|319782725|ref|YP_004142201.1| formyltetrahydrofolate deformylase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168613|gb|ADV12151.1| formyltetrahydrofolate deformylase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 293
Score = 35.0 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIA 52
++ + D GIV V L G NIA
Sbjct: 16 HILTLSCEDRPGIVAAVTAELAANGANIA 44
>gi|170730609|ref|YP_001776042.1| P-protein (prephenate dehydratase/chorismate mutase) [Xylella
fastidiosa M12]
gi|167965402|gb|ACA12412.1| P-protein (prephenate dehydratase / chorismate mutase) [Xylella
fastidiosa M12]
Length = 374
Score = 35.0 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 21/85 (24%), Gaps = 10/85 (11%)
Query: 19 VDIGR---LMICIVNADILGIVVFVGNILGEYGINIAHFHL--GRSQSTEHAISF---LC 70
I + D G + V +GIN+ E+
Sbjct: 284 FAPSGCDRTSILVFIRDNPGALFEVLGSFARHGINMNRIESRPSHQVRWEYVFFIDLLGH 343
Query: 71 IDGSILNSVLEKLSVNVTIRFVKQF 95
++ + L +L VK
Sbjct: 344 VEDEPMKQALAELEQ--HTVKVKIL 366
>gi|167622330|ref|YP_001672624.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella
halifaxensis HAW-EB4]
gi|167352352|gb|ABZ74965.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella halifaxensis HAW-EB4]
Length = 701
Score = 35.0 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF---LCI-DGSILNSVLE 81
+ + + G + + +I+ G NI + L + + + D L +V+
Sbjct: 629 LRVEIVNHQGALAKITSIIASAGSNIHN--LTTEERDGRVFLINLRISVRDRIHLANVMR 686
Query: 82 KLSVNVTIRF 91
++ V +
Sbjct: 687 RIRVLPEVLR 696
>gi|147918721|ref|YP_687556.1| amino acid-binding protein [uncultured methanogenic archaeon RC-I]
gi|110622952|emb|CAJ38230.1| conserved hypothetical amino acid-binding protein [uncultured
methanogenic archaeon RC-I]
Length = 144
Score = 35.0 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+I + DI G + + N LG G+NI + + + A+ L +D +
Sbjct: 70 ETDVIAVEMKDIPGGLHEIANSLGSGGVNIDYAYAF-VTRSGLALLILRVDDIPAAQRVL 128
Query: 82 KLSVN 86
+L+
Sbjct: 129 RLAKV 133
>gi|13471455|ref|NP_103021.1| acetolactate synthase 3 regulatory subunit [Mesorhizobium loti
MAFF303099]
gi|14022197|dbj|BAB48807.1| acetolactate synthase small subunit [Mesorhizobium loti MAFF303099]
Length = 191
Score = 35.0 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+ ++ + G++ V + G NI + ++ +H +S + I V
Sbjct: 21 RPEIHTLSVLVDNEPGVLARVIGLFSGRGYNIESLTVSETEHEKH-LSRITIVTRGTPHV 79
Query: 80 LEKLS-VNVTIRFV-KQFEFNV 99
+E++ I V + + V
Sbjct: 80 MEQIKNQLERIVPVHRVVDLTV 101
>gi|86147647|ref|ZP_01065956.1| formyltetrahydrofolate deformylase [Vibrio sp. MED222]
gi|85834558|gb|EAQ52707.1| formyltetrahydrofolate deformylase [Vibrio sp. MED222]
Length = 279
Score = 35.0 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 26/62 (41%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ + R + D G++ + NI ++ +NI H + ++ H ++G +
Sbjct: 1 MQMERKTLLTHCTDAPGLISKITNICYKHQLNIIHNNEFVDNTSGHFFMRTELEGYFNDE 60
Query: 79 VL 80
L
Sbjct: 61 TL 62
>gi|300813413|ref|ZP_07093763.1| RelA/SpoT family protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300512476|gb|EFK39626.1| RelA/SpoT family protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 407
Score = 34.6 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
R +++ + + I + D ++ V N + E +N+ + ++ + +
Sbjct: 316 RIVQVSWQKDEANSYEAAIEVRALDKPNVIGDVANRINEAKLNMTSLNARSTRDGDAIVD 375
Query: 68 FLCIDGSIL--NSVLEKLSVNVTIRFV 92
+ +I +++KL + V
Sbjct: 376 VILEITNIDELEGIIDKLKRVKNVFDV 402
>gi|241203884|ref|YP_002974980.1| (p)ppGpp synthetase I, SpoT/RelA [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857774|gb|ACS55441.1| (p)ppGpp synthetase I, SpoT/RelA [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 744
Score = 34.6 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEK 82
I + + G + V + +NI + R + + + + D LN +L +
Sbjct: 670 RIMVNGLNEPGTLAKVAQTVAGIDVNIRLLNTVRVAADFTEMMLEVEVWDLRQLNQLLAQ 729
Query: 83 LSVNVTIRFVKQF 95
+ I V++
Sbjct: 730 MKELDCIATVRRL 742
>gi|295091158|emb|CBK77265.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium cf.
saccharolyticum K10]
Length = 761
Score = 34.6 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEKLS 84
I + +G+ V + + E I+I ++ R+ A + D + + +KL
Sbjct: 690 IFANNRIGMFVDLSKVFTERQIDIKSMNV-RTSKQGKATIMMTFDIHGIEELNKLADKLR 748
Query: 85 VNVTIRFV 92
+ +
Sbjct: 749 QIEGVIDI 756
>gi|284989103|ref|YP_003407657.1| aspartate kinase [Geodermatophilus obscurus DSM 43160]
gi|284062348|gb|ADB73286.1| aspartate kinase [Geodermatophilus obscurus DSM 43160]
Length = 422
Score = 34.6 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 8/79 (10%), Positives = 21/79 (26%), Gaps = 3/79 (3%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SV 79
+ D G + +L E +N+ + + ++ + + +
Sbjct: 264 EGKITVFGVPDRPGEAAQLFRVLAEAEVNV-DMIVQNVSAAASKLADISFTLPKSDGPAA 322
Query: 80 LEKLSVNVTIRFVKQFEFN 98
L L F+
Sbjct: 323 LAALEKVKNTIGYTDVTFD 341
>gi|254443490|ref|ZP_05056966.1| acetolactate synthase, small subunit [Verrucomicrobiae bacterium
DG1235]
gi|198257798|gb|EDY82106.1| acetolactate synthase, small subunit [Verrucomicrobiae bacterium
DG1235]
Length = 156
Score = 34.6 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLG--RSQSTEHAISFLCIDGSILNSVLE 81
I ++ + G++ + + G NI ++ + + D ++L+ + +
Sbjct: 3 HTISVLVENKFGVLARIAGLFSGRGFNIDTLNVAPTHDPELSRVTAVVRGDDAVLDQITK 62
Query: 82 KLSVNVTIRFV 92
+L + + V
Sbjct: 63 QLKKLINVVEV 73
>gi|288556918|ref|YP_003428853.1| hypothetical protein BpOF4_19610 [Bacillus pseudofirmus OF4]
gi|288548078|gb|ADC51961.1| hypothetical protein BpOF4_19610 [Bacillus pseudofirmus OF4]
Length = 255
Score = 34.6 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 8/65 (12%), Positives = 21/65 (32%), Gaps = 6/65 (9%)
Query: 27 CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVN 86
++ + G++ + ++LG INI + I S + + +
Sbjct: 8 YQIHNNRPGLLGDISSLLGMLKINIVTINGVDDMRRGMLI------RSKSDDQVARFRAI 61
Query: 87 VTIRF 91
+
Sbjct: 62 LHTID 66
>gi|260400853|gb|ACX37013.1| GTP pyrophosphokinase [Nonomuraea sp. ATCC 39727]
Length = 765
Score = 34.6 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN---SVLEKLSVNVT 88
D ++ V L + +NI + + AIS + VL+ +
Sbjct: 695 DRPRLLSDVTRTLSDQHVNILSASV-TTSRDRVAISKFTFEMGDPKHLGHVLKAVRSIQG 753
Query: 89 IRFV 92
+ V
Sbjct: 754 VFDV 757
>gi|226951748|ref|ZP_03822212.1| homoserine dehydrogenase [Acinetobacter sp. ATCC 27244]
gi|226837538|gb|EEH69921.1| homoserine dehydrogenase [Acinetobacter sp. ATCC 27244]
Length = 437
Score = 34.6 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
I + D G++ V IL GI+I I L I S ++ L
Sbjct: 355 GYYIRLNAEDQTGVLADVTAILSRAGISIDAIMQQSRLKDLIPIVILTDPIVESKMDEAL 414
Query: 81 EKLSVNVTIR 90
++ I
Sbjct: 415 AQIQALPAIH 424
>gi|161870071|ref|YP_001599241.1| homoserine dehydrogenase [Neisseria meningitidis 053442]
gi|161595624|gb|ABX73284.1| homoserine dehydrogenase [Neisseria meningitidis 053442]
Length = 435
Score = 34.6 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQSTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 405 EKYIKSAIAAIEA 417
>gi|114328098|ref|YP_745255.1| putative aminotransferase aatC [Granulibacter bethesdensis CGDNIH1]
gi|114316272|gb|ABI62332.1| putative aminotransferase aatC [Granulibacter bethesdensis CGDNIH1]
Length = 541
Score = 34.6 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 5/87 (5%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+ Q + + G + ++ D G++ V IL ++GI++ L ++ +
Sbjct: 446 LTQAQAVPINAHHGAYYLRLMVVDRPGVLADVTAILRDHGISLESM-LQNGRNPGETVPI 504
Query: 69 LCIDGSILN----SVLEKLSVNVTIRF 91
+ + L +S ++
Sbjct: 505 VLVTHETTEASMQDALIMISELNAVQE 531
>gi|121592515|ref|YP_984411.1| threonine dehydratase [Acidovorax sp. JS42]
gi|222109322|ref|YP_002551586.1| threonine dehydratase [Acidovorax ebreus TPSY]
gi|120604595|gb|ABM40335.1| L-threonine ammonia-lyase [Acidovorax sp. JS42]
gi|221728766|gb|ACM31586.1| threonine dehydratase [Acidovorax ebreus TPSY]
Length = 399
Score = 34.6 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGR 58
I + D+ G++ + ++ E G NI H R
Sbjct: 325 RIMVSARDVPGVLARITALVAEAGANIEEVHHQR 358
>gi|332140217|ref|YP_004425955.1| GTP pyrophosphokinase [Alteromonas macleodii str. 'Deep ecotype']
gi|327550239|gb|AEA96957.1| GTP pyrophosphokinase [Alteromonas macleodii str. 'Deep ecotype']
Length = 727
Score = 34.6 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLSVNV 87
D G++ + +L + + + ++ + A+ + I D ++ VL +L
Sbjct: 658 HDRNGLLRDITTVLANENVPLLGVNSLSDKNRQTALITISIEVQDLETVSKVLTRLRQLK 717
Query: 88 TIRFVK 93
I K
Sbjct: 718 GITDAK 723
>gi|116670096|ref|YP_831029.1| prephenate dehydrogenase [Arthrobacter sp. FB24]
gi|116610205|gb|ABK02929.1| prephenate dehydrogenase [Arthrobacter sp. FB24]
Length = 369
Score = 34.6 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 26/60 (43%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ ++ D G + + +GE G+N+ L S + L + + + ++E L+
Sbjct: 303 LTVLVDDRPGQIARLLTEIGEIGVNLEDLRLDHSSGQNVGMVELSVLPNKHDLLIEALND 362
>gi|307543923|ref|YP_003896402.1| acetolactate synthase 3 regulatory subunit [Halomonas elongata
DSM 2581]
gi|307215947|emb|CBV41217.1| acetolactate synthase 3 regulatory subunit [Halomonas elongata
DSM 2581]
Length = 163
Score = 34.6 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+I I+ + G + V + + NI ++ ++ + +S L + + V+E++
Sbjct: 3 HIISILMENEPGALSRVVGLFSQRNFNIETLNVAPTE--DETLSRLTVTTVGDDRVIEQI 60
Query: 84 SVN 86
+ +
Sbjct: 61 TKH 63
>gi|304409598|ref|ZP_07391218.1| transcriptional regulator, TyrR [Shewanella baltica OS183]
gi|307303956|ref|ZP_07583709.1| transcriptional regulator, TyrR [Shewanella baltica BA175]
gi|304352116|gb|EFM16514.1| transcriptional regulator, TyrR [Shewanella baltica OS183]
gi|306912854|gb|EFN43277.1| transcriptional regulator, TyrR [Shewanella baltica BA175]
Length = 512
Score = 34.6 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D +G+ + +L YGIN+ + F I L++++ ++ ++
Sbjct: 8 QDRVGLAKDILVVLERYGINLIAIDASNQ--GFLYLQFAEISFETLSALMPQIRKVESVH 65
Query: 91 FVKQFEF 97
V+ F
Sbjct: 66 DVRTVSF 72
>gi|86158434|ref|YP_465219.1| formyltetrahydrofolate deformylase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774945|gb|ABC81782.1| formyltetrahydrofolate deformylase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 299
Score = 34.6 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
++ + D GIV + + L +G NI F S A
Sbjct: 20 ILLVQCPDRPGIVAAISSFLYRHGANILDFDQHTSVDNGGAYF 62
>gi|328953694|ref|YP_004371028.1| amino acid-binding ACT domain protein [Desulfobacca acetoxidans DSM
11109]
gi|328454018|gb|AEB09847.1| amino acid-binding ACT domain protein [Desulfobacca acetoxidans DSM
11109]
Length = 143
Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG 73
D G + +V IL +N+ + + S ++A+ D
Sbjct: 78 DRPGGLAWVLQILSNSNVNVEYMYAFVQHSGKNAVIIFRFDN 119
>gi|315452814|ref|YP_004073084.1| aspartokinase, alpha and beta subunits [Helicobacter felis ATCC
49179]
gi|315131866|emb|CBY82494.1| aspartokinase, alpha and beta subunits [Helicobacter felis ATCC
49179]
Length = 400
Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 4/66 (6%)
Query: 27 CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKL 83
I D GI + +L E +NI + + D + VL+ +
Sbjct: 265 IIDACDYPGIAGEIFGLLAEAKLNI-DMIVQTIGKNGKTNINFTLPEEDIEVCQQVLKNV 323
Query: 84 SVNVTI 89
++
Sbjct: 324 RDIGSV 329
>gi|296313667|ref|ZP_06863608.1| homoserine dehydrogenase [Neisseria polysaccharea ATCC 43768]
gi|296839811|gb|EFH23749.1| homoserine dehydrogenase [Neisseria polysaccharea ATCC 43768]
Length = 435
Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 20/73 (27%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQSTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVT 88
+ ++
Sbjct: 405 EKYIKSAIAAIEA 417
>gi|283795474|ref|ZP_06344627.1| GTP diphosphokinase [Clostridium sp. M62/1]
gi|291077138|gb|EFE14502.1| GTP diphosphokinase [Clostridium sp. M62/1]
Length = 761
Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEKLS 84
I + +G+ V + + E I+I ++ R+ A + D + + +KL
Sbjct: 690 IFANNRIGMFVDLSKVFTERQIDIKSMNV-RTSKQGKATIMMTFDIHGIEELNKLADKLR 748
Query: 85 VNVTIRFV 92
+ +
Sbjct: 749 QIEGVIDI 756
>gi|222099093|ref|YP_002533661.1| Acetolactate synthase, small subunit [Thermotoga neapolitana DSM
4359]
gi|221571483|gb|ACM22295.1| Acetolactate synthase, small subunit [Thermotoga neapolitana DSM
4359]
Length = 171
Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
++ ++ + G++ V N+ G NI+ +G S+ + + + G + +E+
Sbjct: 7 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESEVPGLSRLVIMVKG--DDRTIEQ 64
Query: 83 LS----VNVTIRFVKQF 95
+ V + V
Sbjct: 65 IEKQAYKLVEVVKVTPI 81
>gi|221236686|ref|YP_002519123.1| threonine dehydratase [Caulobacter crescentus NA1000]
gi|220965859|gb|ACL97215.1| threonine dehydratase [Caulobacter crescentus NA1000]
Length = 417
Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGR-----SQSTEHAISFLCI-DGSILNSV 79
+ I+ D G++ V +++G G NI + R + D V
Sbjct: 344 LRIIGDDRPGLLSTVASVIGAMGANIIEVNHNRLALDVPAKGAEFDITIETRDAQHTQEV 403
Query: 80 LEKLSV 85
+E L
Sbjct: 404 MEALRE 409
>gi|126173724|ref|YP_001049873.1| transcriptional regulator, TyrR [Shewanella baltica OS155]
gi|153000013|ref|YP_001365694.1| transcriptional regulator TyrR [Shewanella baltica OS185]
gi|160874634|ref|YP_001553950.1| transcriptional regulator TyrR [Shewanella baltica OS195]
gi|217974024|ref|YP_002358775.1| transcriptional regulator TyrR [Shewanella baltica OS223]
gi|125996929|gb|ABN61004.1| transcriptional regulator, TyrR [Shewanella baltica OS155]
gi|151364631|gb|ABS07631.1| transcriptional regulator, TyrR [Shewanella baltica OS185]
gi|160860156|gb|ABX48690.1| transcriptional regulator, TyrR [Shewanella baltica OS195]
gi|217499159|gb|ACK47352.1| transcriptional regulator, TyrR [Shewanella baltica OS223]
gi|315266875|gb|ADT93728.1| transcriptional regulator, TyrR [Shewanella baltica OS678]
Length = 512
Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D +G+ + +L YGIN+ + F I L++++ ++ ++
Sbjct: 8 QDRVGLAKDILVVLERYGINLIAIDASNQ--GFLYLQFAEISFETLSALMPQIRKVESVH 65
Query: 91 FVKQFEF 97
V+ F
Sbjct: 66 DVRTVSF 72
>gi|310642548|ref|YP_003947306.1| prephenate dehydrogenase [Paenibacillus polymyxa SC2]
gi|309247498|gb|ADO57065.1| Prephenate dehydrogenase [Paenibacillus polymyxa SC2]
Length = 362
Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHL 56
+ I D GI+ + LG + IN+++ +
Sbjct: 295 LYIDVPDTPGIIGRIAMELGNHSINLSNMRI 325
>gi|302558847|ref|ZP_07311189.1| beta-N-Acetylglucosaminidase [Streptomyces griseoflavus Tu4000]
gi|302476465|gb|EFL39558.1| beta-N-Acetylglucosaminidase [Streptomyces griseoflavus Tu4000]
Length = 538
Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 17/89 (19%)
Query: 3 SDGKPRFI--------KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHF 54
SD P + ++++I D+ R + + D G + V + +
Sbjct: 239 SDSHPEIVSEQHLTKAQVKKI-VDLAASRHITVVPEIDSPGHLGAV---IAAH----PDL 290
Query: 55 HLGRSQSTEHAISFLCIDGSILNSVLEKL 83
L R+ + I +++ L
Sbjct: 291 QL-RNAGGGAVRGAIDISDPGSAEIVDDL 318
>gi|1870125|emb|CAB06790.1| unknown [Saccharomyces pastorianus]
Length = 309
Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 8/71 (11%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLE 81
++ + + G++ + L G NI + ++ + + + + G ++
Sbjct: 78 HVLNCLVQNEPGVLSRISGTLAARGFNIDSLVVCNTEVKDLSRMTIVLQGQDGVIEQARR 137
Query: 82 KLSVNVTIRFV 92
++ V + V
Sbjct: 138 QIEDLVPVYAV 148
>gi|66864711|gb|AAY57436.1| RelA [Rhizobium etli]
Length = 744
Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + V + +NI + R + E L + D LN +L
Sbjct: 670 RIMVNGLNEPGTLAKVAQTVASLDVNIRLLNTVRVAA-EFTEMMLEVEVWDLRQLNQLLA 728
Query: 82 KLSVNVTIRFVKQF 95
++ I V++
Sbjct: 729 QMKELDCIATVRRL 742
>gi|114568055|ref|YP_755209.1| signal transduction protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114338990|gb|ABI69838.1| putative signal transduction protein with CBS domains
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 220
Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG 73
D G + V ++ E GINI + + ++ L I+
Sbjct: 150 KDRPGSLAEVTGLIAEKGINILNAVVYFDNKSQRYKMILRIED 192
>gi|152979984|ref|YP_001353002.1| homoserine dehydrogenase [Janthinobacterium sp. Marseille]
gi|151280061|gb|ABR88471.1| homoserine dehydrogenase [Janthinobacterium sp. Marseille]
Length = 436
Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 5/72 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL----CIDGSILNSVLEKLSVNV 87
D LG++ V +IL + I+I E + + + ++K+
Sbjct: 362 DKLGVLANVTSILADSTISIDAMLQKEPALGETQTDIIMLTHQTQEKNVEAAIKKIEALP 421
Query: 88 TIR-FVKQFEFN 98
T+ V +
Sbjct: 422 TVMGQVTKIRLE 433
>gi|126738785|ref|ZP_01754481.1| homoserine dehydrogenase [Roseobacter sp. SK209-2-6]
gi|126719966|gb|EBA16673.1| homoserine dehydrogenase [Roseobacter sp. SK209-2-6]
Length = 428
Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 25/73 (34%), Gaps = 2/73 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNS 78
+ + D G + V + LG+ G++I + + ++L +
Sbjct: 346 PAPYYLRLGLQDKPGALAKVASALGDAGVSIDRMRQYGHSEPTAPVLIVTHKCTSTMLEA 405
Query: 79 VLEKLSVNVTIRF 91
LE L+ +
Sbjct: 406 ALESLASTDVVDS 418
>gi|15641994|ref|NP_231626.1| formyltetrahydrofolate deformylase [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121591503|ref|ZP_01678771.1| formyltetrahydrofolate deformylase [Vibrio cholerae 2740-80]
gi|147673084|ref|YP_001217518.1| formyltetrahydrofolate deformylase [Vibrio cholerae O395]
gi|153801839|ref|ZP_01956425.1| formyltetrahydrofolate deformylase [Vibrio cholerae MZO-3]
gi|153820013|ref|ZP_01972680.1| formyltetrahydrofolate deformylase [Vibrio cholerae NCTC 8457]
gi|153823325|ref|ZP_01975992.1| formyltetrahydrofolate deformylase [Vibrio cholerae B33]
gi|153826826|ref|ZP_01979493.1| formyltetrahydrofolate deformylase [Vibrio cholerae MZO-2]
gi|153829821|ref|ZP_01982488.1| formyltetrahydrofolate deformylase [Vibrio cholerae 623-39]
gi|227082119|ref|YP_002810670.1| formyltetrahydrofolate deformylase [Vibrio cholerae M66-2]
gi|229507919|ref|ZP_04397424.1| formyltetrahydrofolate deformylase [Vibrio cholerae BX 330286]
gi|229511846|ref|ZP_04401325.1| formyltetrahydrofolate deformylase [Vibrio cholerae B33]
gi|229515371|ref|ZP_04404831.1| formyltetrahydrofolate deformylase [Vibrio cholerae TMA 21]
gi|229518982|ref|ZP_04408425.1| formyltetrahydrofolate deformylase [Vibrio cholerae RC9]
gi|229521904|ref|ZP_04411321.1| formyltetrahydrofolate deformylase [Vibrio cholerae TM 11079-80]
gi|229524004|ref|ZP_04413409.1| formyltetrahydrofolate deformylase [Vibrio cholerae bv. albensis
VL426]
gi|229528987|ref|ZP_04418377.1| formyltetrahydrofolate deformylase [Vibrio cholerae 12129(1)]
gi|229607464|ref|YP_002878112.1| formyltetrahydrofolate deformylase [Vibrio cholerae MJ-1236]
gi|254226823|ref|ZP_04920395.1| formyltetrahydrofolate deformylase [Vibrio cholerae V51]
gi|254286921|ref|ZP_04961873.1| formyltetrahydrofolate deformylase [Vibrio cholerae AM-19226]
gi|254849078|ref|ZP_05238428.1| formyltetrahydrofolate deformylase [Vibrio cholerae MO10]
gi|255745259|ref|ZP_05419208.1| formyltetrahydrofolate deformylase [Vibrio cholera CIRS 101]
gi|262167942|ref|ZP_06035642.1| formyltetrahydrofolate deformylase [Vibrio cholerae RC27]
gi|262189641|ref|ZP_06048025.1| formyltetrahydrofolate deformylase [Vibrio cholerae CT 5369-93]
gi|298497976|ref|ZP_07007783.1| formyltetrahydrofolate deformylase [Vibrio cholerae MAK 757]
gi|9656534|gb|AAF95140.1| formyltetrahydrofolate deformylase [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121546644|gb|EAX56831.1| formyltetrahydrofolate deformylase [Vibrio cholerae 2740-80]
gi|124122611|gb|EAY41354.1| formyltetrahydrofolate deformylase [Vibrio cholerae MZO-3]
gi|125620670|gb|EAZ49032.1| formyltetrahydrofolate deformylase [Vibrio cholerae V51]
gi|126509449|gb|EAZ72043.1| formyltetrahydrofolate deformylase [Vibrio cholerae NCTC 8457]
gi|126519159|gb|EAZ76382.1| formyltetrahydrofolate deformylase [Vibrio cholerae B33]
gi|146314967|gb|ABQ19506.1| formyltetrahydrofolate deformylase [Vibrio cholerae O395]
gi|148874680|gb|EDL72815.1| formyltetrahydrofolate deformylase [Vibrio cholerae 623-39]
gi|149739347|gb|EDM53593.1| formyltetrahydrofolate deformylase [Vibrio cholerae MZO-2]
gi|150423071|gb|EDN15020.1| formyltetrahydrofolate deformylase [Vibrio cholerae AM-19226]
gi|227010007|gb|ACP06219.1| formyltetrahydrofolate deformylase [Vibrio cholerae M66-2]
gi|227013889|gb|ACP10099.1| formyltetrahydrofolate deformylase [Vibrio cholerae O395]
gi|229332761|gb|EEN98247.1| formyltetrahydrofolate deformylase [Vibrio cholerae 12129(1)]
gi|229337585|gb|EEO02602.1| formyltetrahydrofolate deformylase [Vibrio cholerae bv. albensis
VL426]
gi|229340829|gb|EEO05834.1| formyltetrahydrofolate deformylase [Vibrio cholerae TM 11079-80]
gi|229343671|gb|EEO08646.1| formyltetrahydrofolate deformylase [Vibrio cholerae RC9]
gi|229348076|gb|EEO13035.1| formyltetrahydrofolate deformylase [Vibrio cholerae TMA 21]
gi|229351811|gb|EEO16752.1| formyltetrahydrofolate deformylase [Vibrio cholerae B33]
gi|229355424|gb|EEO20345.1| formyltetrahydrofolate deformylase [Vibrio cholerae BX 330286]
gi|229370119|gb|ACQ60542.1| formyltetrahydrofolate deformylase [Vibrio cholerae MJ-1236]
gi|254844783|gb|EET23197.1| formyltetrahydrofolate deformylase [Vibrio cholerae MO10]
gi|255737089|gb|EET92485.1| formyltetrahydrofolate deformylase [Vibrio cholera CIRS 101]
gi|262023669|gb|EEY42370.1| formyltetrahydrofolate deformylase [Vibrio cholerae RC27]
gi|262034477|gb|EEY52833.1| formyltetrahydrofolate deformylase [Vibrio cholerae CT 5369-93]
gi|297542309|gb|EFH78359.1| formyltetrahydrofolate deformylase [Vibrio cholerae MAK 757]
gi|327484528|gb|AEA78935.1| Formyltetrahydrofolate deformylase [Vibrio cholerae LMA3894-4]
Length = 277
Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + + D G++ + NI ++ +NI H + ++ H ++G ++ L
Sbjct: 1 MEKKTLLTHCPDAPGLISKITNICYKHQLNIIHNNEFVDNASGHFFMRTELEGYFNDATL 60
Query: 81 EKLSVNVTIR 90
L+
Sbjct: 61 --LADLDHAL 68
>gi|291543480|emb|CBL16589.1| acetolactate synthase, small subunit [Ruminococcus sp. 18P13]
Length = 168
Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTI 89
+ G++ V + G NI +G +++ + + + D L+ +L++L +
Sbjct: 12 NQSGVLTRVSGMFTRRGFNIDSLTVGETENPALSRITIAMRGDAHDLDQILKQLRKLHDV 71
Query: 90 RFVKQF 95
V+
Sbjct: 72 TEVRAL 77
>gi|281357363|ref|ZP_06243852.1| acetolactate synthase, small subunit [Victivallis vadensis ATCC
BAA-548]
gi|281316394|gb|EFB00419.1| acetolactate synthase, small subunit [Victivallis vadensis ATCC
BAA-548]
Length = 164
Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSV 79
+ I ++ + G++ V + G NI+ + ++ + + D +IL +
Sbjct: 5 EKHTISVLVENKFGVLARVAGLFSGRGYNISSLTVHETEDPRFSKMTIVTTGDAAILEQI 64
Query: 80 LEKLSVNVTIRFVKQFE 96
++LS + + V+
Sbjct: 65 DKQLSKLIDVIRVENLT 81
>gi|159026908|emb|CAO89159.1| ilvH [Microcystis aeruginosa PCC 7806]
Length = 174
Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + D + + +
Sbjct: 3 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQMGVSRITMVVPGDEDSIEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 63 QLYKLINVLKVQDIT 77
>gi|85860817|ref|YP_463019.1| acetolactate synthase small subunit [Syntrophus aciditrophicus
SB]
gi|85723908|gb|ABC78851.1| acetolactate synthase small subunit [Syntrophus aciditrophicus
SB]
Length = 166
Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSIL 76
+ I I I+ + G++ V + G NI + + + E + L D
Sbjct: 1 MSIEERTITILVKNEPGVLSRVAGVFSGRGYNIKTLCVAETTNPEISRITLTSNADADFT 60
Query: 77 NSVLEKLSVNVTIRFV 92
+ ++L V + V
Sbjct: 61 EKIKKQLDKLVDVVDV 76
>gi|332186669|ref|ZP_08388412.1| formyltetrahydrofolate deformylase [Sphingomonas sp. S17]
gi|332013321|gb|EGI55383.1| formyltetrahydrofolate deformylase [Sphingomonas sp. S17]
Length = 285
Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 31 ADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
D GIV + L G NI ++ R + + + +E+
Sbjct: 13 KDQPGIVAAITTALASLGANILESNQFWDRQADHFFLRIAVTVPADVTRDAVER 66
>gi|261209835|ref|ZP_05924137.1| formyltetrahydrofolate deformylase [Vibrio sp. RC341]
gi|260841133|gb|EEX67653.1| formyltetrahydrofolate deformylase [Vibrio sp. RC341]
Length = 277
Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + + D G++ + NI ++ +NI H + ++ H ++G ++ L
Sbjct: 1 MEKKTLLTHCPDAPGLISKITNICYKHQLNIIHNNEFVDNASGHFFMRTELEGYFNDATL 60
Query: 81 EKLSVNVTIR 90
L+
Sbjct: 61 --LADLDHAL 68
>gi|257051727|ref|YP_003129560.1| acetolactate synthase, small subunit [Halorhabdus utahensis DSM
12940]
gi|256690490|gb|ACV10827.1| acetolactate synthase, small subunit [Halorhabdus utahensis DSM
12940]
Length = 205
Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Query: 33 ILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLEKLSVNVTIR 90
G++ V + NI +G + + A + I+ + ++L V
Sbjct: 50 EPGVLAEVSGLFSRRQFNIESLTVGPTTDDDIARMTIVIEEAEPGIEQAKKQLEKLVPTI 109
Query: 91 FVKQFE 96
V++ +
Sbjct: 110 AVEELK 115
>gi|218710320|ref|YP_002417941.1| pII uridylyl-transferase [Vibrio splendidus LGP32]
gi|254798834|sp|B7VIS0|GLND_VIBSL RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218323339|emb|CAV19516.1| [Protein-PII] uridylyltransferase [Vibrio splendidus LGP32]
Length = 873
Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Query: 16 NFDVDI----GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI 71
+ R ++ + D G++ VG E IN+ + + L
Sbjct: 787 RVEFLPTKSKKRTLMELRALDTPGLLAQVGATFAELDINLHGAKITTIGERAEDLFILTS 846
Query: 72 D--GSILNSVLEKLSV 85
D G + + L
Sbjct: 847 DAGGRLSEEQEQALRE 862
>gi|16127865|ref|NP_422429.1| threonine dehydratase [Caulobacter crescentus CB15]
gi|13425389|gb|AAK25597.1| threonine dehydratase [Caulobacter crescentus CB15]
Length = 400
Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGR-----SQSTEHAISFLCI-DGSILNSV 79
+ I+ D G++ V +++G G NI + R + D V
Sbjct: 327 LRIIGDDRPGLLSTVASVIGAMGANIIEVNHNRLALDVPAKGAEFDITIETRDAQHTQEV 386
Query: 80 LEKLSV 85
+E L
Sbjct: 387 MEALRE 392
>gi|167036444|ref|YP_001664022.1| acetolactate synthase, small subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|166855278|gb|ABY93686.1| acetolactate synthase, small subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
Length = 175
Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + G++ V + G NI +G ++ + + L + D + V+
Sbjct: 10 HIISVLVNNHPGVLSRVVGLFSRRGYNIESLAVGTTEKEDISRITLTVEGDDYTVTQVIR 69
Query: 82 KLSVNVTIRFVKQF 95
+L+ V + V+
Sbjct: 70 QLNKLVDVLKVQNI 83
>gi|330684308|gb|EGG96043.1| prephenate dehydrogenase [Staphylococcus epidermidis VCU121]
Length = 363
Score = 34.6 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ + D G++ V NIL + I+I++ L + E L I +
Sbjct: 297 LYVDIPDKPGMISKVTNILSLHNISISN--LKILEVREDIYGALQISFKNPEDRERGIQA 354
Query: 86 NVTI 89
Sbjct: 355 LNQF 358
>gi|302550426|ref|ZP_07302768.1| prephenate dehydrogenase [Streptomyces viridochromogenes DSM 40736]
gi|302468044|gb|EFL31137.1| prephenate dehydrogenase [Streptomyces viridochromogenes DSM 40736]
Length = 361
Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 8/82 (9%), Positives = 26/82 (31%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+++ + ++ ++ D G + + G G+NI + + + + L
Sbjct: 279 VRVPGKHGSAPRAYEVVAVLIDDQPGQLARIFADAGMAGVNIEDVRIEHATGQQAGLVQL 338
Query: 70 CIDGSILNSVLEKLSVNVTIRF 91
++ + L
Sbjct: 339 MVEPKAAPVLTAALRERGWAIR 360
>gi|242279906|ref|YP_002992035.1| homoserine dehydrogenase [Desulfovibrio salexigens DSM 2638]
gi|242122800|gb|ACS80496.1| homoserine dehydrogenase [Desulfovibrio salexigens DSM 2638]
Length = 429
Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 17/57 (29%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
D G++ + L E+ I+IA + + + V +
Sbjct: 356 QDKAGVMASLSKCLAEHNISIAQAVQKGNPDEKDIPVVFTTHKASTKDVHAAIEEID 412
>gi|197105106|ref|YP_002130483.1| homoserine dehydrogenase [Phenylobacterium zucineum HLK1]
gi|196478526|gb|ACG78054.1| homoserine dehydrogenase [Phenylobacterium zucineum HLK1]
Length = 429
Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 6/72 (8%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL-EKLSVNVTI 89
D G++ V L E G++I F L + + + ++ SVL + +
Sbjct: 356 KDEPGVIAAVSETLAEAGVSIESF-LQKPVENADGVPIVLTTHAVAESVLAAAIERIAGL 414
Query: 90 RFV----KQFEF 97
V +
Sbjct: 415 SAVLDKPRMLRI 426
>gi|166367553|ref|YP_001659826.1| acetolactate synthase 3 regulatory subunit [Microcystis
aeruginosa NIES-843]
gi|166089926|dbj|BAG04634.1| acetolactate synthase small subunit [Microcystis aeruginosa
NIES-843]
Length = 174
Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + D + + +
Sbjct: 3 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQMGVSRITMVVPGDEDSIEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V+
Sbjct: 63 QLYKLINVLKVQDIT 77
>gi|159044605|ref|YP_001533399.1| aspartokinase [Dinoroseobacter shibae DFL 12]
gi|157912365|gb|ABV93798.1| aspartokinase [Dinoroseobacter shibae DFL 12]
Length = 412
Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 21/76 (27%), Gaps = 4/76 (5%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
M I AD GI + L E G+N+ + + VL
Sbjct: 265 EAKMTLISVADRPGIAAAIFGPLSEAGVNV-DMIVQNISEDGRTDMTF---SCPTDQVLR 320
Query: 82 KLSVNVTIRFVKQFEF 97
+ + + F
Sbjct: 321 AERAIKEAKELGEINF 336
>gi|120599512|ref|YP_964086.1| transcriptional regulator, TyrR [Shewanella sp. W3-18-1]
gi|120559605|gb|ABM25532.1| transcriptional regulator, TyrR [Shewanella sp. W3-18-1]
Length = 512
Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D +G+ + +L YGIN+ + F I L++++ ++ ++
Sbjct: 8 QDRVGLAKDILVVLERYGINLIAIDASNQ--GFLYLQFAEISFETLSALMPQIRKVESVH 65
Query: 91 FVKQFEF 97
V+ F
Sbjct: 66 DVRTVSF 72
>gi|117921220|ref|YP_870412.1| transcriptional regulator, TyrR [Shewanella sp. ANA-3]
gi|117613552|gb|ABK49006.1| transcriptional regulator, TyrR [Shewanella sp. ANA-3]
Length = 512
Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D +G+ + +L YGIN+ + F + L++++ ++ ++
Sbjct: 8 QDRVGLAKDILVVLERYGINLIAIDASNQ--GFLYLQFAEVSFDTLSALMPQIRKVESVH 65
Query: 91 FVKQFEF 97
V+ F
Sbjct: 66 DVRTVSF 72
>gi|312891464|ref|ZP_07750981.1| formyltetrahydrofolate deformylase [Mucilaginibacter paludis DSM
18603]
gi|311296158|gb|EFQ73310.1| formyltetrahydrofolate deformylase [Mucilaginibacter paludis DSM
18603]
Length = 276
Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 27/77 (35%), Gaps = 6/77 (7%)
Query: 25 MICIVN-ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---- 79
MI ++ D +G+V + +L + +NI + L ++ + N
Sbjct: 1 MIIVIQCKDQVGLVAAISGVLAKQQLNIISMREHVDKQENRFYMRLQVEKTDANEAALEK 60
Query: 80 -LEKLSVNVTIRFVKQF 95
L+ + + +
Sbjct: 61 ELQSVLNTDAVITINPL 77
>gi|262373945|ref|ZP_06067222.1| homoserine dehydrogenase [Acinetobacter junii SH205]
gi|262310956|gb|EEY92043.1| homoserine dehydrogenase [Acinetobacter junii SH205]
Length = 437
Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
I + D G++ V +IL GI+I I L I S ++ L
Sbjct: 355 GYYIRLNAEDQTGVLADVTSILSRSGISIDAIMQQSRLKDLIPIVILTDPIVESKMDEAL 414
Query: 81 EKLSVNVTIR 90
++ IR
Sbjct: 415 AQIQALPAIR 424
>gi|296138957|ref|YP_003646200.1| homoserine dehydrogenase [Tsukamurella paurometabola DSM 20162]
gi|296027091|gb|ADG77861.1| Homoserine dehydrogenase [Tsukamurella paurometabola DSM 20162]
Length = 438
Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 32/105 (30%), Gaps = 14/105 (13%)
Query: 1 VFSDGKPRFIKIQEI--NFDVDIGRLMICIVN-----ADILGIVVFVGNILGEYGINIAH 53
VFS P + + N + ++ +D G++ V N ++I+
Sbjct: 330 VFSGRGP----LDSVYANLPIAPIGDVLTRYYVAMEVSDRPGVLSAVANEFSARNVSIST 385
Query: 54 FHLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNVTIRFVKQF 95
+ A + + ++ +E L + V
Sbjct: 386 VRQQADLPSSGARLVILTHKAPDAALSATVEALKNLDVVTAVSSV 430
>gi|283798389|ref|ZP_06347542.1| prephenate dehydrogenase [Clostridium sp. M62/1]
gi|291073973|gb|EFE11337.1| prephenate dehydrogenase [Clostridium sp. M62/1]
gi|295092839|emb|CBK78946.1| Prephenate dehydrogenase [Clostridium cf. saccharolyticum K10]
Length = 365
Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEH-AISFLCIDGSILNSVLEKLSV 85
D G + + IL GI+I + + ++ A+S D + + ++L
Sbjct: 303 DEPGAISIISAILAGKGISIKNIGINHNREGGEGALSITFYDEAARQAAWDRLKK 357
>gi|297585528|ref|YP_003701308.1| homoserine dehydrogenase [Bacillus selenitireducens MLS10]
gi|297143985|gb|ADI00743.1| Homoserine dehydrogenase [Bacillus selenitireducens MLS10]
Length = 433
Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 5/70 (7%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL----NSVLEKL 83
I D+ G + I GE I++ A + + + VL+KL
Sbjct: 354 IHAKDLPGTFANLTAIFGECDISLEKILQVPLNEGRLA-EIIVVTHGVSRKNYKEVLQKL 412
Query: 84 SVNVTIRFVK 93
+ + VK
Sbjct: 413 NETDAVVEVK 422
>gi|157363019|ref|YP_001469786.1| CBS domain-containing protein [Thermotoga lettingae TMO]
gi|157313623|gb|ABV32722.1| CBS domain containing protein [Thermotoga lettingae TMO]
Length = 200
Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 6/62 (9%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
+ + D G + + ++L + +N+ + + + +D + +
Sbjct: 126 GTRVLMKLEDKPGQLKEIFDVLAQNKMNV--LSVNTIKEDGFRRVSIKVDTCEPEELAKT 183
Query: 83 LS 84
L
Sbjct: 184 LK 185
>gi|14602188|ref|NP_147191.1| hypothetical protein APE_0381.1 [Aeropyrum pernix K1]
gi|116062344|dbj|BAA79336.2| hypothetical protein [Aeropyrum pernix K1]
Length = 142
Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 18/66 (27%), Gaps = 4/66 (6%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID----GSILNSVLEKLSVN 86
D G + V +L + I+I E + D + +L
Sbjct: 65 RDRPGALAAVTEVLARHKIDIVASKCASIVRGEEGGCTIIADFSRADIDPEDLKRELERL 124
Query: 87 VTIRFV 92
+ V
Sbjct: 125 DVVFHV 130
>gi|86146892|ref|ZP_01065211.1| PII uridylyl-transferase [Vibrio sp. MED222]
gi|85835344|gb|EAQ53483.1| PII uridylyl-transferase [Vibrio sp. MED222]
Length = 873
Score = 34.6 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Query: 16 NFDVDI----GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI 71
+ R ++ + D G++ VG E IN+ + + L
Sbjct: 787 RVEFLPTKSKKRTLMELRALDTPGLLAQVGATFAELDINLHGAKITTIGERAEDLFILTS 846
Query: 72 D--GSILNSVLEKLSV 85
D G + + L
Sbjct: 847 DAGGRLSEEQEQALRE 862
>gi|313575255|emb|CBI71195.1| hypothetical protein [uncultured bacterium]
Length = 184
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+I R + ++ + GI+ V + G NI + ++ +S + +
Sbjct: 20 EIERHTLSVLVDNEPGILARVVGLFSARGYNIESLTVSETEHGRR-LSRITVVVIATPKT 78
Query: 80 LEKLS 84
L ++
Sbjct: 79 LTQIK 83
>gi|260434119|ref|ZP_05788090.1| homoserine dehydrogenase [Silicibacter lacuscaerulensis ITI-1157]
gi|260417947|gb|EEX11206.1| homoserine dehydrogenase [Silicibacter lacuscaerulensis ITI-1157]
Length = 428
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNS 78
+ + D G + V ILG G++I + + + L+
Sbjct: 346 PAPYYLRLALLDKPGALAKVAAILGNAGVSIDRMRQYAHAEDTAPVLIVTHKTTRATLDI 405
Query: 79 VLEKLSVNVTI 89
LE L +
Sbjct: 406 ALEDLRKTDVV 416
>gi|229817470|ref|ZP_04447752.1| hypothetical protein BIFANG_02733 [Bifidobacterium angulatum DSM
20098]
gi|229785259|gb|EEP21373.1| hypothetical protein BIFANG_02733 [Bifidobacterium angulatum DSM
20098]
Length = 774
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D ++ V +L ++G+NI G + SF D LN++L + +
Sbjct: 694 DRRNLLSDVTRVLSDHGVNIISGSISTGSDRVATSQFSFEMADPQHLNTLLAAVRKIEGV 753
Query: 90 RFV 92
V
Sbjct: 754 FDV 756
>gi|126729044|ref|ZP_01744858.1| Homoserine dehydrogenase [Sagittula stellata E-37]
gi|126710034|gb|EBA09086.1| Homoserine dehydrogenase [Sagittula stellata E-37]
Length = 428
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 21/69 (30%), Gaps = 2/69 (2%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILN 77
+ AD G + V LGE G++I + + + L+
Sbjct: 345 TPAPYYLRTQLADKPGALAKVAAALGEAGVSIHRMRQYDHIEDRAPVLIVTHKTTRAALD 404
Query: 78 SVLEKLSVN 86
LE +
Sbjct: 405 QALEAMQKL 413
>gi|116252986|ref|YP_768824.1| acetolactate synthase 3 regulatory subunit [Rhizobium leguminosarum
bv. viciae 3841]
gi|115257634|emb|CAK08731.1| putative acetolactate synthase isozyme III [Rhizobium leguminosarum
bv. viciae 3841]
Length = 190
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ + ++ + G++ V + G NI + + +S + +
Sbjct: 19 AAVESHTLSVLVDNEPGVLARVIGLFSGRGYNIESLTVS-ETEHQAHLSRITVVTRGTPQ 77
Query: 79 VLEKLSV-NVTIRFV-KQFEFNV 99
VLE++ I V + + V
Sbjct: 78 VLEQIKAQLERIVPVHRVVDLTV 100
>gi|18420244|ref|NP_568041.1| protein kinase family protein [Arabidopsis thaliana]
Length = 575
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I D ++ + +L E G+NI H S + +++ +DG E+L
Sbjct: 177 HEITFSTEDKPKLLFQLTALLAELGLNIQEAHAF-STTDGYSLDVFVVDGWPYEET-ERL 234
Query: 84 S 84
Sbjct: 235 R 235
>gi|4467134|emb|CAB37503.1| protein kinase like protein [Arabidopsis thaliana]
gi|7270830|emb|CAB80511.1| protein kinase like protein [Arabidopsis thaliana]
Length = 545
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I D ++ + +L E G+NI H S + +++ +DG E+L
Sbjct: 207 HEITFSTEDKPKLLFQLTALLAELGLNIQEAHAF-STTDGYSLDVFVVDGWPYEET-ERL 264
Query: 84 S 84
Sbjct: 265 R 265
>gi|325958046|ref|YP_004289512.1| homoserine dehydrogenase [Methanobacterium sp. AL-21]
gi|325329478|gb|ADZ08540.1| homoserine dehydrogenase [Methanobacterium sp. AL-21]
Length = 426
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
KI++I+ D++ + I D G++ + IL +Y I+I + I +
Sbjct: 338 KIKDIS-DLESKYYLRLIT-KDEPGVLHKISGILSKYNISIGSMTQKQHDKPGIPIFMV- 394
Query: 71 IDGSILNSVLEKLSVNVTIRFV 92
++ + + ++ V
Sbjct: 395 THSALERDMRSAVEEIDQLKCV 416
>gi|260433407|ref|ZP_05787378.1| acetolactate synthase, small subunit [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417235|gb|EEX10494.1| acetolactate synthase, small subunit [Silicibacter lacuscaerulensis
ITI-1157]
Length = 186
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R I ++ + G++ V + G NI + T H +S + I + V+E
Sbjct: 27 ERHTIAVLVENEPGVLARVIGLFSGRGYNIESLTVAEVDHTGH-LSRITIVTTGTPQVIE 85
Query: 82 KLSV-NVTIRFVKQFE 96
++ I V
Sbjct: 86 QIKAQLGRIVSVHDVH 101
>gi|269128136|ref|YP_003301506.1| Homoserine dehydrogenase [Thermomonospora curvata DSM 43183]
gi|268313094|gb|ACY99468.1| Homoserine dehydrogenase [Thermomonospora curvata DSM 43183]
Length = 437
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 29/94 (30%), Gaps = 10/94 (10%)
Query: 10 IKIQEINFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
+++ V I D G++ + + + ++I + + E
Sbjct: 337 VEVTYAELPVLPMGETITRYYIQLDVADRSGVLAQIAELFARHDVSI--QAVRQEGYGED 394
Query: 65 AISFLCIDGSILNSV---LEKLSVNVTIRFVKQF 95
A + + ++ +E L +R V
Sbjct: 395 AQLVIVTHRAPDAALAATVEGLRRLDIVREVSSV 428
>gi|227497338|ref|ZP_03927570.1| Formyltetrahydrofolate deformylase [Actinomyces urogenitalis DSM
15434]
gi|226833209|gb|EEH65592.1| Formyltetrahydrofolate deformylase [Actinomyces urogenitalis DSM
15434]
Length = 303
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK-LSVNVTIR 90
D GIV V L G NI + + + + + LE ++
Sbjct: 35 DRPGIVHAVTGALARRGGNITESQQFGDAESGLFFMRVAVLTRVPRTELEADIAELAATY 94
Query: 91 FVK 93
V+
Sbjct: 95 EVR 97
>gi|255505727|ref|ZP_05347810.3| homoserine dehydrogenase [Bryantella formatexigens DSM 14469]
gi|255266109|gb|EET59314.1| homoserine dehydrogenase [Bryantella formatexigens DSM 14469]
Length = 436
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----------SVL 80
D G++ V ++ G ++I F R + + I ++ +
Sbjct: 366 EDRPGVLAGVTSVFGNNNVSIEQFIQKRKE--GTLAEIVVITEEVVERNFNDSLKILRTM 423
Query: 81 EKLSVNVTIRFV 92
+ + V
Sbjct: 424 SMIKEISAVIRV 435
>gi|113970940|ref|YP_734733.1| transcriptional regulator, TyrR [Shewanella sp. MR-4]
gi|114048164|ref|YP_738714.1| transcriptional regulator, TyrR [Shewanella sp. MR-7]
gi|113885624|gb|ABI39676.1| transcriptional regulator, TyrR [Shewanella sp. MR-4]
gi|113889606|gb|ABI43657.1| transcriptional regulator, TyrR [Shewanella sp. MR-7]
Length = 512
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D +G+ + +L YGIN+ + F I L++++ ++ ++
Sbjct: 8 QDRVGLAKDILVVLERYGINLIAIDASNQ--GFLYLQFAEISFETLSALMPQIRKVESVH 65
Query: 91 FVKQFEF 97
V+ F
Sbjct: 66 DVRTVSF 72
>gi|146292490|ref|YP_001182914.1| transcriptional regulator, TyrR [Shewanella putrefaciens CN-32]
gi|145564180|gb|ABP75115.1| transcriptional regulator, TyrR [Shewanella putrefaciens CN-32]
gi|319425794|gb|ADV53868.1| aromatic amino acid biosynthesis/transport transciptional
repressor, TyrR [Shewanella putrefaciens 200]
Length = 512
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D +G+ + +L YGIN+ + F I L++++ ++ ++
Sbjct: 8 QDRVGLAKDILVVLERYGINLIAIDASNQ--GFLYLQFAEISFETLSALMPQIRKVESVH 65
Query: 91 FVKQFEF 97
V+ F
Sbjct: 66 DVRTVSF 72
>gi|327542520|gb|EGF28994.1| malate oxidoreductase [Rhodopirellula baltica WH47]
Length = 476
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLEK 82
I + +D G + + +GE I + + + + F + ++E
Sbjct: 11 TIRLRYSDSPGAMGKITTAIGEADGAIGAVDIVNIRGGKISRDFTVNARDVDHGKRIVEH 70
Query: 83 LSVNVTIRFV 92
L + V
Sbjct: 71 LRTVEEVEVV 80
>gi|309776671|ref|ZP_07671645.1| CBS domain protein [Erysipelotrichaceae bacterium 3_1_53]
gi|308915419|gb|EFP61185.1| CBS domain protein [Erysipelotrichaceae bacterium 3_1_53]
Length = 215
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+CI D LG + + I NI H + SQ A + ID +++
Sbjct: 140 SGSRVCIEVKDELGTIGKISEIFVRNNCNITHLGVY-SQHNGFADMIIRIDTFQTDALAA 198
Query: 82 KLSVN 86
L +
Sbjct: 199 DLEEH 203
>gi|312139501|ref|YP_004006837.1| gtp diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-diphosphatase [Rhodococcus equi 103S]
gi|325672609|ref|ZP_08152305.1| GTP diphosphokinase [Rhodococcus equi ATCC 33707]
gi|311888840|emb|CBH48152.1| GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-diphosphatase [Rhodococcus equi 103S]
gi|325556486|gb|EGD26152.1| GTP diphosphokinase [Rhodococcus equi ATCC 33707]
Length = 778
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 26/86 (30%), Gaps = 9/86 (10%)
Query: 15 INFDVDIGRLMICIVNA-----DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
I+ + + +V D ++ V L + +NI + S A+S
Sbjct: 687 IDVEWAPSPTSLFLVAIQIEALDRHRLLSDVTKALADEKVNILSASVTTSGDR-VAVSKF 745
Query: 70 CIDGSILN---SVLEKLSVNVTIRFV 92
+ VL + + V
Sbjct: 746 TFEMGDPKHLGHVLNVVRNVEGVYDV 771
>gi|261401366|ref|ZP_05987491.1| homoserine dehydrogenase [Neisseria lactamica ATCC 23970]
gi|269208661|gb|EEZ75116.1| homoserine dehydrogenase [Neisseria lactamica ATCC 23970]
Length = 435
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 7/77 (9%), Positives = 22/77 (28%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAKENVSIEALIQKGVIDQTTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVTIRFV 92
+ ++ + V
Sbjct: 405 EKRIKSAIAGIEALVCV 421
>gi|147668657|ref|YP_001213475.1| (p)ppGpp synthetase I, SpoT/RelA [Dehalococcoides sp. BAV1]
gi|146269605|gb|ABQ16597.1| (p)ppGpp synthetase I, SpoT/RelA [Dehalococcoides sp. BAV1]
Length = 728
Score = 34.6 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 4/91 (4%)
Query: 8 RFIKIQ-EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
R + + + + ++ I I D +G+V V ++ E I+I + + +
Sbjct: 631 RLVSVDWGMPKE-ELYPASIRIQAWDRVGLVRDVSTVVAEEKISILSMTVTENDDKTTTL 689
Query: 67 SFLCIDGSILN--SVLEKLSVNVTIRFVKQF 95
+ S+ ++ KL I + +
Sbjct: 690 AMTTQIKSLSQLTRLMAKLEGIRGIISINRV 720
>gi|329577579|gb|EGG59013.1| conserved domain protein [Enterococcus faecalis TX1467]
Length = 86
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
I++ N + ++ ++N + + + L + NI + R +
Sbjct: 4 IELDGFNVQLHGPLPILLVINQEEQAMQA-FKDTLQKN--NIQVNAVSRYVEGNQILFIF 60
Query: 70 CIDGSILNSVLEKLSVNVTIRFVKQF 95
+D S ++SV E+L +
Sbjct: 61 DLDLSPISSVKEQLFSLDDTSKIILL 86
>gi|325068875|ref|ZP_08127548.1| (p)ppGpp synthetase I, SpoT/RelA [Actinomyces oris K20]
Length = 775
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 20/66 (30%), Gaps = 6/66 (9%)
Query: 32 DILGIVVFVGNILGEYGINI--AHFHLGRSQS--TEHAISFLCIDGSILNSVLEKLSVNV 87
D G++ + L + +N+ A R + + + + L L
Sbjct: 702 DRGGLLADITRALADSHVNLVSASIATSRDRVVTGRFVVELAEVGHL--DHTLAALRRID 759
Query: 88 TIRFVK 93
+ +
Sbjct: 760 GVFEAR 765
>gi|268317030|ref|YP_003290749.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Rhodothermus marinus DSM 4252]
gi|262334564|gb|ACY48361.1| D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
[Rhodothermus marinus DSM 4252]
Length = 450
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 32/98 (32%), Gaps = 16/98 (16%)
Query: 1 VFSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRS- 59
VFS G+ I D + ++ +V++D G + + + E G ++
Sbjct: 346 VFSPGQV-------IGVDAEPPYWVLSVVHSDARGTKKAISDAIYEAGA--SNLQSSHRD 396
Query: 60 -QSTEHAISFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
A ID + L + + ++
Sbjct: 397 FSRYGFAYEVSAIDRPLSQEQLLHI-----VETARRIS 429
>gi|34557322|ref|NP_907137.1| acetolactate synthase [Wolinella succinogenes DSM 1740]
gi|34483038|emb|CAE10037.1| ACETOLACTATE SYNTHASE [Wolinella succinogenes]
Length = 135
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 9/74 (12%), Positives = 20/74 (27%), Gaps = 4/74 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ I + G++ + + E +NI F + A L L
Sbjct: 5 LSIFMENKPGMLERLTRLFSESKVNIIAFSIASGGEFGVAKFLLD----QPKIAYAALKK 60
Query: 86 NVTIRFVKQFEFNV 99
++ +
Sbjct: 61 EGIAVSLRPVVIPI 74
>gi|327400960|ref|YP_004341799.1| phosphoserine phosphatase SerB [Archaeoglobus veneficus SNP6]
gi|327316468|gb|AEA47084.1| phosphoserine phosphatase SerB [Archaeoglobus veneficus SNP6]
Length = 409
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 9/81 (11%)
Query: 14 EINFDVDI---------GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
+N V ++ ++ D +GIV + IL E GINI +L
Sbjct: 93 GVNVSVSPFERKSSDEKNLYVLTVLGEDRVGIVYSITRILYEMGINIERTNLTARDRLIS 152
Query: 65 AISFLCIDGSILNSVLEKLSV 85
+ + S + V +L
Sbjct: 153 IEFLIDMGKSDVEEVKRRLKE 173
>gi|323699531|ref|ZP_08111443.1| acetolactate synthase, small subunit [Desulfovibrio sp. ND132]
gi|323459463|gb|EGB15328.1| acetolactate synthase, small subunit [Desulfovibrio desulfuricans
ND132]
Length = 159
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK----LSVN 86
+ G++ + G+Y NI G +++ + + LC+DG + ++K L
Sbjct: 10 RNEPGVLAMMARECGKYDANILSLAAGETENPQVSRIVLCVDG--DDEAIDKVGRYLESL 67
Query: 87 VTIRF 91
+
Sbjct: 68 DAVIQ 72
>gi|260776057|ref|ZP_05884952.1| transcriptional repressor protein TyrR [Vibrio coralliilyticus
ATCC BAA-450]
gi|260607280|gb|EEX33545.1| transcriptional repressor protein TyrR [Vibrio coralliilyticus
ATCC BAA-450]
Length = 514
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + + + D + ++ ++ +R
Sbjct: 8 EDRLGLTRELLDILASKNIDLRGIEIDITGIIYLNCPDIDFDTF--SELMAEIRRISGVR 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|225387176|ref|ZP_03756940.1| hypothetical protein CLOSTASPAR_00928 [Clostridium asparagiforme
DSM 15981]
gi|225046724|gb|EEG56970.1| hypothetical protein CLOSTASPAR_00928 [Clostridium asparagiforme
DSM 15981]
Length = 147
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LE 81
+ + D G++ + +++ Y NI H + ++ +V +E
Sbjct: 71 TLVVQMDDEQGLLSDLLHVVAVYKANILTIHQSIPVNGVATLTLSVEVRENTGNVSSMVE 130
Query: 82 KLSVNVTIRFVKQF 95
+L I +VK
Sbjct: 131 ELEELDGIHYVKIL 144
>gi|149182466|ref|ZP_01860940.1| hypothetical protein BSG1_21270 [Bacillus sp. SG-1]
gi|148849797|gb|EDL63973.1| hypothetical protein BSG1_21270 [Bacillus sp. SG-1]
Length = 263
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 29 VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
+ + G++ + ++LG INI + + D I LE + +
Sbjct: 12 IQKNRPGLLGDISSLLGMLSINIVTINGVDEGRRGM-LLLANSDEQITR--LESILQTMD 68
Query: 89 IRFVKQFE 96
V +
Sbjct: 69 TINVTKLR 76
>gi|73747961|ref|YP_307200.1| GTP pyrophosphokinase [Dehalococcoides sp. CBDB1]
gi|289431960|ref|YP_003461833.1| (p)ppGpp synthetase I, SpoT/RelA [Dehalococcoides sp. GT]
gi|73659677|emb|CAI82284.1| GTP pyrophosphokinase [Dehalococcoides sp. CBDB1]
gi|288945680|gb|ADC73377.1| (p)ppGpp synthetase I, SpoT/RelA [Dehalococcoides sp. GT]
Length = 728
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 4/91 (4%)
Query: 8 RFIKIQ-EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
R + + + + ++ I I D +G+V V ++ E I+I + + +
Sbjct: 631 RLVSVDWGMPKE-ELYPASIRIQAWDRVGLVRDVSTVVAEEKISILSMTVTENDDKTTTL 689
Query: 67 SFLCIDGSILN--SVLEKLSVNVTIRFVKQF 95
+ S+ ++ KL I + +
Sbjct: 690 AMTTQIKSLSQLTRLMAKLEGIRGIISINRV 720
>gi|71280085|ref|YP_268291.1| protein-P-II uridylyltransferase [Colwellia psychrerythraea 34H]
gi|81170614|sp|Q485H4|GLND_COLP3 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|71145825|gb|AAZ26298.1| protein-P-II uridylyltransferase [Colwellia psychrerythraea 34H]
Length = 878
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Query: 11 KIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
++ I R MI I+ D G++ + + E +NI + E A
Sbjct: 796 RVNFIKIHAK-NRTMIEIIALDRPGLLSNISQVFLEARVNIHSAKITTF--GEKADDVFT 852
Query: 71 IDGSILNSV 79
I +++
Sbjct: 853 ISTEEDDAL 861
>gi|306819920|ref|ZP_07453572.1| acetolactate synthase small subunit [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304552033|gb|EFM39972.1| acetolactate synthase small subunit [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 170
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEK 82
+ IV + G++ + ++ G G NI + + + + L + + I +L+
Sbjct: 9 LSIVVQNNYGVLARISSLFGRRGYNIDTLTVSNTDDPDISRITLTVQGFENEINQIILQT 68
Query: 83 LSVNVTIRFVKQFE 96
S + V E
Sbjct: 69 -SKLEEVIKVDVLE 81
>gi|226939091|ref|YP_002794162.1| acetolactate synthase 3 regulatory subunit [Laribacter
hongkongensis HLHK9]
gi|226714015|gb|ACO73153.1| IlvH [Laribacter hongkongensis HLHK9]
Length = 163
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
++ I+ + G + V + G NI + ++ + +S + I V+E++
Sbjct: 3 HILSILIENEAGALSRVVGLFSARGYNIDSLTVSTTE--DATLSRMTIVTHGSEEVIEQI 60
Query: 84 SVN--VTIRFVKQFEFN 98
+ + I VK + N
Sbjct: 61 TKHLNKLIEVVKVIDLN 77
>gi|229544006|ref|ZP_04433065.1| Prephenate dehydrogenase [Bacillus coagulans 36D1]
gi|229325145|gb|EEN90821.1| Prephenate dehydrogenase [Bacillus coagulans 36D1]
Length = 366
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL 56
+ + D+ G+V + N L E GI+I + +
Sbjct: 290 AIPSFYDLFVDIPDVPGVVSQITNKLAEKGISITNIRI 327
>gi|221133720|ref|ZP_03560025.1| acetolactate synthase III, small subunit [Glaciecola sp.
HTCC2999]
Length = 165
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 6/74 (8%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEK 82
+I ++ + G + + + + G N+ + + + + D ++ ++++
Sbjct: 4 IISVLMENAPGALSRIVGVFSQRGYNVDSLCVAETDDPSLSRLTIATQGDNKVIEQIIKQ 63
Query: 83 LSVNVTIRFVKQFE 96
++ + + V +
Sbjct: 64 MNKLIDVLKVTELT 77
>gi|27262244|gb|AAN87403.1| Acetolactate synthase small subunit [Heliobacillus mobilis]
Length = 190
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
+ ++ + G++V + ++ NI G ++ + + ++G V+
Sbjct: 28 HTLAVLVENRPGVLVHISGLIARRAFNIESITAGYTEEADITRITIVVEGDNRSLEQVVN 87
Query: 82 KLSVNVTIRFVKQFE 96
+LS V + + +
Sbjct: 88 QLSKLVDVIKIVELT 102
>gi|32470838|ref|NP_863831.1| NAD-dependent malic enzyme [Rhodopirellula baltica SH 1]
gi|32442983|emb|CAD71504.1| NAD-dependent malic enzyme [Rhodopirellula baltica SH 1]
Length = 476
Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLEK 82
I + +D G + + +GE I + + + + F + ++E
Sbjct: 11 TIRLRYSDSPGAMGKITTAIGEADGAIGAVDIVNIRGGKISRDFTVNARDVDHGKRIVEH 70
Query: 83 LSVNVTIRFV 92
L + V
Sbjct: 71 LRTVEEVEVV 80
>gi|308173653|ref|YP_003920358.1| hypothetical protein BAMF_1762 [Bacillus amyloliquefaciens DSM 7]
gi|307606517|emb|CBI42888.1| RBAM16740 [Bacillus amyloliquefaciens DSM 7]
gi|328553415|gb|AEB23907.1| hypothetical protein BAMTA208_08690 [Bacillus amyloliquefaciens
TA208]
gi|328911793|gb|AEB63389.1| Uncharacterized protein ymfK [Bacillus amyloliquefaciens LL3]
Length = 263
Score = 34.6 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 29 VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
+ + G++ + ++LG INI + + ID LE + +
Sbjct: 12 IQVNRPGLLGDISSLLGMLSINIVTINGVDLSRRGMLLRCRHIDQIKR---LESILKTME 68
Query: 89 IRFVKQFE 96
V +
Sbjct: 69 TIKVTKLR 76
>gi|227511437|ref|ZP_03941486.1| acetoin utilization protein, CBS domain protein [Lactobacillus
buchneri ATCC 11577]
gi|227085388|gb|EEI20700.1| acetoin utilization protein, CBS domain protein [Lactobacillus
buchneri ATCC 11577]
Length = 216
Score = 34.6 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 27 CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
++ D G++ +G I+ + +NI + + + +D SV KL
Sbjct: 145 VFIHQDRTGVIYEIGKIMADNNLNIQTLMVTHQ--GTVKVVEIHVDRKDGLSVASKLRE 201
>gi|225572942|ref|ZP_03781697.1| hypothetical protein RUMHYD_01133 [Blautia hydrogenotrophica DSM
10507]
gi|225039700|gb|EEG49946.1| hypothetical protein RUMHYD_01133 [Blautia hydrogenotrophica DSM
10507]
Length = 150
Score = 34.6 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF---LCIDGS 74
+ L I D G++ V ++ +Y NI H S ++ + +
Sbjct: 67 ETRGKTLTFIISMDDEPGLLSSVLQMIAQYHGNILTIHQSIPISGVATLTLSVAILPNEG 126
Query: 75 ILNSVLEKLSVNVTIRFVKQF 95
+++E + I ++K
Sbjct: 127 DAQAMVEAIERCEGIHYLKIL 147
>gi|217974062|ref|YP_002358813.1| PII uridylyl-transferase [Shewanella baltica OS223]
gi|217499197|gb|ACK47390.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS223]
Length = 861
Score = 34.6 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 6/73 (8%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSV 79
G + + D + V +L IN+ A+ + L DG+
Sbjct: 673 GGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKDNYALDTFVILEQDGAP---- 728
Query: 80 LEKLSVNVTIRFV 92
+ +LS +IR
Sbjct: 729 VSQLSRIQSIRKA 741
>gi|124027907|ref|YP_001013227.1| divalent cation transporter [Hyperthermus butylicus DSM 5456]
gi|123978601|gb|ABM80882.1| predicted Divalent cation transporter [Hyperthermus butylicus DSM
5456]
Length = 527
Score = 34.6 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NSVLEK 82
+ I D G++ + +L E G NI T H + + G +V +
Sbjct: 8 LYIEARDRPGLLAEIMGVLRELGANIITNFGYTVDDTAHLLFIIDYGGEPDELAEAVASR 67
Query: 83 LSVN 86
+
Sbjct: 68 IREV 71
>gi|220903896|ref|YP_002479208.1| amino acid-binding ACT domain protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868195|gb|ACL48530.1| amino acid-binding ACT domain protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 187
Score = 34.6 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 6/58 (10%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
+I D G++ + + + +NI + + + ++V
Sbjct: 94 EPFVITADGPDKPGLIAAMSRVFARHDVNIESLK-AILGEGGANHALFVFEVMVPDAV 150
>gi|218282087|ref|ZP_03488386.1| hypothetical protein EUBIFOR_00961 [Eubacterium biforme DSM 3989]
gi|218216880|gb|EEC90418.1| hypothetical protein EUBIFOR_00961 [Eubacterium biforme DSM 3989]
Length = 216
Score = 34.6 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
I + D +G + + I E +NI H + + A + D + + +
Sbjct: 142 GSRITVSVKDEIGAIGKLSEIFVENKVNINHIGVYSFED-GIANLVIRCDTTDPDDLQAD 200
Query: 83 LS 84
L
Sbjct: 201 LE 202
>gi|150021184|ref|YP_001306538.1| signal-transduction protein [Thermosipho melanesiensis BI429]
gi|149793705|gb|ABR31153.1| putative signal-transduction protein with CBS domains [Thermosipho
melanesiensis BI429]
Length = 200
Score = 34.6 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 23/75 (30%), Gaps = 6/75 (8%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
I + D G + + ++L +NI + + + D E
Sbjct: 126 GTRIILELEDKPGELKKMIDVLANNKMNILSILTLKENNKRQVSIKIQCDDP------ET 179
Query: 83 LSVNVTIRFVKQFEF 97
++ + I +K
Sbjct: 180 VANLLEIYNIKYLSI 194
>gi|323126676|gb|ADX23973.1| hypothetical protein SDE12394_02155 [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
Length = 220
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 6/60 (10%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
F+++ + + + ++ + +G++ + + L + +NI + + + I
Sbjct: 130 FLEVSGYGVE----GIRVVLLADNAVGVLAKIADCLSQENLNIRCTVVANRSNGKTVIEM 185
>gi|313668343|ref|YP_004048627.1| homoserine dehydrogenase [Neisseria lactamica ST-640]
gi|313005805|emb|CBN87259.1| putative homoserine dehydrogenase [Neisseria lactamica 020-06]
Length = 435
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 7/77 (9%), Positives = 22/77 (28%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 345 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 404
Query: 76 LNSVLEKLSVNVTIRFV 92
+ ++ + V
Sbjct: 405 EKRIKSAIAGIEALVCV 421
>gi|309378496|emb|CBX22921.1| putative homoserine dehydrogenase [Neisseria lactamica Y92-1009]
Length = 433
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 7/77 (9%), Positives = 22/77 (28%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 343 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 402
Query: 76 LNSVLEKLSVNVTIRFV 92
+ ++ + V
Sbjct: 403 EKRIKSAIAGIEALVCV 419
>gi|257063730|ref|YP_003143402.1| monofunctional chorismate mutase, clade 2 [Slackia
heliotrinireducens DSM 20476]
gi|256791383|gb|ACV22053.1| monofunctional chorismate mutase, clade 2 [Slackia
heliotrinireducens DSM 20476]
Length = 403
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 8/76 (10%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAISFLCIDGSILNSV-LE 81
M+ + G + V + GIN+A R + +L ++ + + V ++
Sbjct: 319 MLITPHE--PGSLFRVISRFAALGINMAKLE-SRPIPGREFEFMFYLDVESTPKDEVFMK 375
Query: 82 KLSVNVTIRFVKQFEF 97
+ I Q F
Sbjct: 376 AAAQIPYISE--QLHF 389
>gi|254445833|ref|ZP_05059309.1| asparate kinase, monofunctional class [Verrucomicrobiae bacterium
DG1235]
gi|198260141|gb|EDY84449.1| asparate kinase, monofunctional class [Verrucomicrobiae bacterium
DG1235]
Length = 408
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 8/77 (10%), Positives = 22/77 (28%), Gaps = 2/77 (2%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + D + ++ D G + LG+ + I + A
Sbjct: 251 VVVRGVALDRN-QAKIMVSNIPDKPGSAAQIFEALGKANV-IVDMIVQNIGRNGVANLTF 308
Query: 70 CIDGSILNSVLEKLSVN 86
+ L+ +
Sbjct: 309 TVPRDDSERSLDAVEKV 325
>gi|152999975|ref|YP_001365656.1| PII uridylyl-transferase [Shewanella baltica OS185]
gi|151364593|gb|ABS07593.1| metal dependent phosphohydrolase [Shewanella baltica OS185]
Length = 861
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 6/73 (8%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSV 79
G + + D + V +L IN+ A+ + L DG+
Sbjct: 673 GGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKDNYALDTFVILEQDGAP---- 728
Query: 80 LEKLSVNVTIRFV 92
+ +LS +IR
Sbjct: 729 VSQLSRIQSIRKA 741
>gi|160874596|ref|YP_001553912.1| PII uridylyl-transferase [Shewanella baltica OS195]
gi|304409560|ref|ZP_07391180.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS183]
gi|307303918|ref|ZP_07583671.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica BA175]
gi|160860118|gb|ABX48652.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS195]
gi|304352078|gb|EFM16476.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS183]
gi|306912816|gb|EFN43239.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica BA175]
gi|315266837|gb|ADT93690.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella baltica OS678]
Length = 861
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 6/73 (8%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSV 79
G + + D + V +L IN+ A+ + L DG+
Sbjct: 673 GGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKDNYALDTFVILEQDGAP---- 728
Query: 80 LEKLSVNVTIRFV 92
+ +LS +IR
Sbjct: 729 VSQLSRIQSIRKA 741
>gi|123968864|ref|YP_001009722.1| acetolactate synthase 3 regulatory subunit [Prochlorococcus
marinus str. AS9601]
gi|126696684|ref|YP_001091570.1| acetolactate synthase 3 regulatory subunit [Prochlorococcus
marinus str. MIT 9301]
gi|91070073|gb|ABE10998.1| acetolactate synthase small subunit [uncultured Prochlorococcus
marinus clone ASNC612]
gi|123198974|gb|ABM70615.1| Acetolactate synthase small subunit [Prochlorococcus marinus str.
AS9601]
gi|126543727|gb|ABO17969.1| Acetolactate synthase small subunit [Prochlorococcus marinus str.
MIT 9301]
Length = 174
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G ++S + + D L + +
Sbjct: 3 HTLSVLVEDESGALSRISGLFARRGFNIDSLAVGPAESKGISRLTMVVEGDDETLQQMTK 62
Query: 82 KLSVNVTIRFV 92
+L+ + V
Sbjct: 63 QLNKLFNVLGV 73
>gi|313673776|ref|YP_004051887.1| cbs domain containing membrane protein [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940532|gb|ADR19724.1| CBS domain containing membrane protein [Calditerrivibrio
nitroreducens DSM 19672]
Length = 222
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 9/86 (10%)
Query: 9 FIKIQEINFDVDIGRLMI-----CIVNADILGIVVFVGNILGEYGINI---AHFHLGRSQ 60
I + V+ + I IV D G + + I+ ++ +NI A F L
Sbjct: 122 ITAIDVFDVFVEAMGMRIPGARISIVLDDRPGAIAEMAKIIKQHDLNIVSLATFFLKDQS 181
Query: 61 STEHAISFLCIDGSILNSVLEKLSVN 86
+ I D I +SV E+L
Sbjct: 182 KRDVVIRISGEDDKIKSSV-EELKSL 206
>gi|261253428|ref|ZP_05946001.1| formyltetrahydrofolate deformylase [Vibrio orientalis CIP 102891]
gi|260936819|gb|EEX92808.1| formyltetrahydrofolate deformylase [Vibrio orientalis CIP 102891]
Length = 277
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 25/60 (41%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + + D G++ + NI ++ +NI H + ++ H ++G + L
Sbjct: 1 MEKKTLLTHCTDAPGLISKITNICYKHQLNIIHNNEFVDNTSGHFFMRTELEGYFNDETL 60
>gi|92115125|ref|YP_575053.1| homoserine dehydrogenase [Chromohalobacter salexigens DSM 3043]
gi|91798215|gb|ABE60354.1| homoserine dehydrogenase [Chromohalobacter salexigens DSM 3043]
Length = 440
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 24/72 (33%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
+ + + ++ D G++ V IL E GI+I + E L +
Sbjct: 348 PMEDIVTAYYLRLLAVDRPGVLARVATILSEQGISIEAIIQKEAIEGELVPIILMTHRTR 407
Query: 76 LNSVLEKLSVNV 87
+ E +
Sbjct: 408 EQHMNEAIRQLE 419
>gi|85713993|ref|ZP_01044982.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
gi|85699119|gb|EAQ36987.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
Length = 925
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 5/62 (8%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I D MI + D G++ + + + +NIA H+ E A
Sbjct: 837 VTINNQWSD---RHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATF--GERARDVF 891
Query: 70 CI 71
+
Sbjct: 892 YV 893
>gi|300728167|ref|ZP_07061538.1| acetolactate synthase, small subunit [Prevotella bryantii B14]
gi|299774593|gb|EFI71214.1| acetolactate synthase, small subunit [Prevotella bryantii B14]
Length = 188
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 7/73 (9%), Positives = 25/73 (34%), Gaps = 2/73 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ + + +I GI+ + + +NI ++ S + D + + +
Sbjct: 11 YTLLVYSENIAGILNQITAVFTRRQVNIESLNVSASSIKNIHKYTITAWSDEEQIKKITK 70
Query: 82 KLSVNVTIRFVKQ 94
+ + + +
Sbjct: 71 AIEKKIDVVKAQY 83
>gi|283851356|ref|ZP_06368638.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. FW1012B]
gi|283573306|gb|EFC21284.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. FW1012B]
Length = 738
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST-EHAISFLCI-DGSILNSVLEKL 83
+ I+ + G++ + ++L E G+NI + + + + + D L ++K+
Sbjct: 649 LSILAKNQKGVLGKISHVLVEEGVNIDSGTIHSNIDGTSQLLFRVEVRDSGHLYRTIDKI 708
Query: 84 SVNVTIRFVK 93
S + VK
Sbjct: 709 SRLEQVLAVK 718
>gi|283782058|ref|YP_003372813.1| Homoserine dehydrogenase [Pirellula staleyi DSM 6068]
gi|283440511|gb|ADB18953.1| Homoserine dehydrogenase [Pirellula staleyi DSM 6068]
Length = 438
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 25/67 (37%), Gaps = 3/67 (4%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS---FLCIDGSILNSVLEKLSVNV 87
D G++ + +LG++GI+IA ++ + + + + +
Sbjct: 358 EDRPGVLAEIAGVLGKHGISIASVIQHEAKGSGVNRVVPLVIMTYQAREGDARKAVEAIS 417
Query: 88 TIRFVKQ 94
+ VK
Sbjct: 418 QLTSVKA 424
>gi|296088936|emb|CBI14838.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
I D ++ + +IL E G+NI H S ++ +DG
Sbjct: 180 HEITFSTVDKPKLLSQLTSILAEVGLNIQEAHAF-STVDGFSLDVFVVDGWP 230
>gi|163781736|ref|ZP_02176736.1| aspartokinase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882956|gb|EDP76460.1| aspartokinase [Hydrogenivirga sp. 128-5-R1-1]
Length = 412
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 26/86 (30%), Gaps = 5/86 (5%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ I D + + D GI + LGE I + +
Sbjct: 249 VAVRGITVDTK-EARITVVRVPDQPGIAAKLFKALGEAHI-VVDMIVQNVSHEGFTDMSF 306
Query: 70 CI---DGSILNSVLEKLSVNVTIRFV 92
+ D ++ K++ + V
Sbjct: 307 TVSKNDAPKAEEIVRKVATEIGASEV 332
>gi|126173686|ref|YP_001049835.1| PII uridylyl-transferase [Shewanella baltica OS155]
gi|125996891|gb|ABN60966.1| metal dependent phosphohydrolase [Shewanella baltica OS155]
Length = 861
Score = 34.6 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 6/73 (8%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSV 79
G + + D + V +L IN+ A+ + L DG+
Sbjct: 673 GGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKDNYALDTFVILEQDGAP---- 728
Query: 80 LEKLSVNVTIRFV 92
+ +LS +IR
Sbjct: 729 VSQLSRIQSIRKA 741
>gi|323704749|ref|ZP_08116326.1| homoserine dehydrogenase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323535675|gb|EGB25449.1| homoserine dehydrogenase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 419
Score = 34.6 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV-- 79
+ I I+ D G++ V +LG+ GI++ + + E+A L ++ ++
Sbjct: 337 SKYYIRIIALDKPGVMSKVTGVLGQEGISLVS-VVQKEVLGEYAEIVLITHNALTKNLFT 395
Query: 80 -LEKLSVNVTIRFV 92
L+++ + V
Sbjct: 396 ALDEIEKLKEVDRV 409
>gi|323464512|gb|ADX76665.1| prephenate dehydrogenase [Staphylococcus pseudintermedius ED99]
Length = 363
Score = 34.6 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 8/45 (17%), Positives = 18/45 (40%), Gaps = 5/45 (11%)
Query: 17 FDVDIGRLM-----ICIVNADILGIVVFVGNILGEYGINIAHFHL 56
+ M + + D G++ V IL ++ I+I + +
Sbjct: 283 LPIRGKGAMQSTYDLYVDIPDKPGMISKVTEILSQHQISIRNLRI 327
>gi|317153509|ref|YP_004121557.1| amino acid-binding ACT domain-containing protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316943760|gb|ADU62811.1| amino acid-binding ACT domain protein [Desulfovibrio aespoeensis
Aspo-2]
Length = 143
Score = 34.6 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
++ + D G + + ++L E GIN+ + + +QS + A+ D
Sbjct: 62 NGFTV---GRTSVVAVEITDKPGGLHAILSMLQEEGINVEYMYAFVTQSGDRAVLIFRFD 118
Query: 73 G 73
Sbjct: 119 R 119
>gi|326203609|ref|ZP_08193473.1| amino acid-binding ACT domain protein [Clostridium papyrosolvens
DSM 2782]
gi|325986429|gb|EGD47261.1| amino acid-binding ACT domain protein [Clostridium papyrosolvens
DSM 2782]
Length = 143
Score = 34.6 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
D G + +IL + GI+I + + ++ A L ++ + +E L
Sbjct: 77 EDKPGGLAKSLDILRDNGISIEYMYAFVGKTGNEAFVILRVEN--PETAIETL 127
>gi|255324166|ref|ZP_05365288.1| asparate kinase, monofunctional class [Corynebacterium
tuberculostearicum SK141]
gi|311741081|ref|ZP_07714906.1| aspartate kinase [Corynebacterium pseudogenitalium ATCC 33035]
gi|255298682|gb|EET77977.1| asparate kinase, monofunctional class [Corynebacterium
tuberculostearicum SK141]
gi|311303883|gb|EFQ79961.1| aspartate kinase [Corynebacterium pseudogenitalium ATCC 33035]
Length = 421
Score = 34.6 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 21/67 (31%), Gaps = 6/67 (8%)
Query: 27 CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-----DGSILNSVLE 81
+ D G V ++ + INI L S E + + DG +L
Sbjct: 269 VLGIPDRPGEAAKVFRVIADAEINI-DMVLQNVSSLEDGTTDITFTCPRADGPRAMELLT 327
Query: 82 KLSVNVT 88
KL
Sbjct: 328 KLKSEGG 334
>gi|167623153|ref|YP_001673447.1| (p)ppGpp synthetase I SpoT/RelA [Shewanella halifaxensis HAW-EB4]
gi|167353175|gb|ABZ75788.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella halifaxensis HAW-EB4]
Length = 735
Score = 34.6 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN---SVLE 81
+ I+ D G++ + ++L ++ T+ AI L ++ L+ VL
Sbjct: 662 RLSILANDQSGLLRDLTSVLAAEKTHVMAMSSTSDVKTQTAIIELELELYNLDGLSKVLS 721
Query: 82 KLSVNVTIRFVKQF 95
K++ + ++
Sbjct: 722 KINQVEGVMQARRL 735
>gi|148977486|ref|ZP_01814075.1| acetolactate synthase III small subunit [Vibrionales bacterium
SWAT-3]
gi|145963281|gb|EDK28547.1| acetolactate synthase III small subunit [Vibrionales bacterium
SWAT-3]
Length = 164
Score = 34.6 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+I ++ + G + V + + G NI ++ + + +S L + + LE++
Sbjct: 3 HIISLLMENQPGALSRVVGLFSQRGYNIESLNVSPTD--DPTLSRLNVTTNSSEMQLEQI 60
Query: 84 S----VNVTIRFVKQFE 96
+ + V++
Sbjct: 61 QKQLHKLIDVLKVQEVS 77
>gi|117928738|ref|YP_873289.1| amino acid-binding ACT domain-containing protein [Acidothermus
cellulolyticus 11B]
gi|117649201|gb|ABK53303.1| amino acid-binding ACT domain protein [Acidothermus
cellulolyticus 11B]
Length = 211
Score = 34.6 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKLSVNVTI 89
D GI+ V +L + G +I + + + A+ + + ++++L+ +
Sbjct: 11 DRPGILARVTAVLADAGADIKSIAVLERVA-DRAVDDIYVVWPHTQTGDLVDRLTEIRGV 69
Query: 90 R 90
R
Sbjct: 70 R 70
>gi|310780258|ref|YP_003968590.1| acetolactate synthase, small subunit [Ilyobacter polytropus DSM
2926]
gi|309749581|gb|ADO84242.1| acetolactate synthase, small subunit [Ilyobacter polytropus DSM
2926]
Length = 161
Score = 34.6 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKL 83
I I+ + G++ + + + GINI G S + +C D ++ ++ +
Sbjct: 6 ILIIMNNKPGVLSKISGLFQKRGINIETITAGESYPADLVRMTVCGNWDEYTVHQIMAQA 65
Query: 84 SVNVTIRFVKQFEFN 98
+RFVK EF+
Sbjct: 66 EKLFDVRFVK--EFD 78
>gi|197122272|ref|YP_002134223.1| formyltetrahydrofolate deformylase [Anaeromyxobacter sp. K]
gi|220917055|ref|YP_002492359.1| formyltetrahydrofolate deformylase [Anaeromyxobacter dehalogenans
2CP-1]
gi|196172121|gb|ACG73094.1| formyltetrahydrofolate deformylase [Anaeromyxobacter sp. K]
gi|219954909|gb|ACL65293.1| formyltetrahydrofolate deformylase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 286
Score = 34.6 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
++ + D GIV + + L +G NI F S A
Sbjct: 7 ILLVQCPDRPGIVAAISSFLYRHGANILDFDQHTSVDNGGAYF 49
>gi|73748895|ref|YP_308134.1| homoserine dehydrogenase [Dehalococcoides sp. CBDB1]
gi|289432891|ref|YP_003462764.1| homoserine dehydrogenase [Dehalococcoides sp. GT]
gi|73660611|emb|CAI83218.1| homoserine dehydrogenase [Dehalococcoides sp. CBDB1]
gi|288946611|gb|ADC74308.1| Homoserine dehydrogenase [Dehalococcoides sp. GT]
Length = 433
Score = 34.6 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + +LG++ I+I+ + A + + V + L +
Sbjct: 361 DSPGVLALIAKVLGDHSISISSVIQKETDEKNLTAEIVIMTHPAKEAFVQQALVKLGGLD 420
Query: 91 FVKQFE 96
VK+
Sbjct: 421 KVKEIN 426
>gi|331701177|ref|YP_004398136.1| phosphoglycerate dehydrogenase [Lactobacillus buchneri NRRL
B-30929]
gi|329128520|gb|AEB73073.1| Phosphoglycerate dehydrogenase [Lactobacillus buchneri NRRL
B-30929]
Length = 392
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 9/90 (10%), Positives = 24/90 (26%), Gaps = 4/90 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI--- 66
+ ++ + + V V I+ Y + + + I
Sbjct: 296 VNFPRVDLPF-MSNQRLTFFFHARDTFWVDVAGIMSRYDLPVQEMMGNTMDGYGYTIVNT 354
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFVKQFE 96
I ++L +L+ + V+
Sbjct: 355 DLAEITQQQTQTLLNELNQIDGMIRVRLLN 384
>gi|291562682|emb|CBL41498.1| homoserine dehydrogenase [butyrate-producing bacterium SS3/4]
Length = 430
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 21/70 (30%), Gaps = 10/70 (14%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK--------- 82
D G + + +LG ++IA + + A + D + +
Sbjct: 359 DKPGALANIAGVLGNNDVSIA-QVVQKRARDGVAELVVITDSVLERHFNDALMIVKGMSV 417
Query: 83 LSVNVTIRFV 92
L I V
Sbjct: 418 LREVSGIIRV 427
>gi|197106238|ref|YP_002131615.1| glycine cleavage system transcriptional repressor [Phenylobacterium
zucineum HLK1]
gi|196479658|gb|ACG79186.1| glycine cleavage system transcriptional repressor [Phenylobacterium
zucineum HLK1]
Length = 176
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 21/84 (25%), Gaps = 7/84 (8%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID------ 72
L +V D GIV V L +NI F S ++
Sbjct: 86 AAGEALQFSLVGQDRPGIVRQVTGALSGLSVNIETFETRTSAEPHSGAPLFHLEARLRLP 145
Query: 73 -GSILNSVLEKLSVNVTIRFVKQF 95
G + V L V
Sbjct: 146 AGLPADKVQAALEAISGEIMVDTV 169
>gi|163789411|ref|ZP_02183850.1| hypothetical protein CAT7_01547 [Carnobacterium sp. AT7]
gi|159875265|gb|EDP69330.1| hypothetical protein CAT7_01547 [Carnobacterium sp. AT7]
Length = 226
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 8/81 (9%)
Query: 9 FIKIQEINFDVDIGRLMICIVN-ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
FI I N I I D GI+ + NIL E I+I + R +
Sbjct: 131 FIDIMGYNN----KGSRIVIDIPEDQPGILEDITNILAEAQISIHQIAVYRKDN--FTQV 184
Query: 68 FLCIDGSILNSVLEKLSVNVT 88
+ +D S ++++
Sbjct: 185 IIQMDSP-DTSAIKEILTTSG 204
>gi|157150415|ref|YP_001449843.1| acetolactate synthase 3 regulatory subunit [Streptococcus
gordonii str. Challis substr. CH1]
gi|157075209|gb|ABV09892.1| acetolactate synthase, small subunit [Streptococcus gordonii str.
Challis substr. CH1]
Length = 158
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G +++ E + + ID + L V + +
Sbjct: 4 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGTTENPEVSRITIIIDVTSLAEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ V+
Sbjct: 64 QLNRQIDVIRVRDIT 78
>gi|119961938|ref|YP_948033.1| GTP pyrophosphokinase [Arthrobacter aurescens TC1]
gi|119948797|gb|ABM07708.1| putative GTP pyrophosphokinase [Arthrobacter aurescens TC1]
Length = 802
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 30/92 (32%), Gaps = 12/92 (13%)
Query: 8 RFIKIQEINFDVDIGRLMICIV-----NADILGIVVFVGNILGEYGINIAHFHLGRSQ-S 61
R ++ + + + +V D ++ V IL E +NI + S
Sbjct: 706 RIVE-----VEWAPTQSSVFLVEIQVEALDRKSLLSDVTRILSENHVNILAASVHTSSDR 760
Query: 62 TEHAISFLCI-DGSILNSVLEKLSVNVTIRFV 92
+ + D L+ VL + + V
Sbjct: 761 VAISKFAFEMGDPKYLHHVLNAVRRIDGVFDV 792
>gi|312622274|ref|YP_004023887.1| amino acid-binding ACT domain-containing protein
[Caldicellulosiruptor kronotskyensis 2002]
gi|312793680|ref|YP_004026603.1| amino acid-binding ACT domain-containing protein
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180820|gb|ADQ40990.1| amino acid-binding ACT domain protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312202741|gb|ADQ46068.1| amino acid-binding ACT domain protein [Caldicellulosiruptor
kronotskyensis 2002]
Length = 143
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 5/73 (6%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+I I D G + V IL + I I + + + ++ A+ L ++
Sbjct: 62 NGFTVSAT---DVIAIAVEDKPGGLAKVLEILYKKDIGIEYMYAFVGKLSDQALVILKVE 118
Query: 73 GSILNSVLEKLSV 85
+ + +E L
Sbjct: 119 KA--DEAIEVLKE 129
>gi|297618802|ref|YP_003706907.1| acetolactate synthase, small subunit [Methanococcus voltae A3]
gi|297377779|gb|ADI35934.1| acetolactate synthase, small subunit [Methanococcus voltae A3]
Length = 169
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ ++ + + NI+ +G +++ + A + + D + L VL+
Sbjct: 5 HIITVLVLHKPSVLQRISGLFARRWFNISSITVGITENPDIARMTIVVKGDDTHLEQVLK 64
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + VK +
Sbjct: 65 QLNKLVEVVKVKDLK 79
>gi|294141949|ref|YP_003557927.1| GTP pyrophosphokinase [Shewanella violacea DSS12]
gi|293328418|dbj|BAJ03149.1| GTP pyrophosphokinase [Shewanella violacea DSS12]
Length = 734
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN---SVLE 81
+ I+ D G++ + ++L ++ T+ A L ++ ++ VL
Sbjct: 661 RLRIIANDRSGLLRDLTSVLAAEKTHVMAMSSSSDVKTQTAAIELELELYNIDGLSKVLA 720
Query: 82 KLSVNVTIRFVKQF 95
K++ + ++
Sbjct: 721 KINQVEGVSEARRL 734
>gi|288941756|ref|YP_003443996.1| UTP-GlnB uridylyltransferase, GlnD [Allochromatium vinosum DSM 180]
gi|288897128|gb|ADC62964.1| UTP-GlnB uridylyltransferase, GlnD [Allochromatium vinosum DSM 180]
Length = 885
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 6/70 (8%)
Query: 17 FDVDI----GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLC 70
D+ G I I + D + L + G+NI + + L
Sbjct: 689 VDIRPITARGGSEIFIYSRDRDNLFARTTAALDQMGLNIMDARVMTTSDGMVVNSYQVLD 748
Query: 71 IDGSILNSVL 80
DG+ ++ L
Sbjct: 749 RDGAPIDDPL 758
>gi|3367596|emb|CAA20048.1| putative protein [Arabidopsis thaliana]
gi|7270530|emb|CAB81487.1| putative protein [Arabidopsis thaliana]
Length = 553
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
I D ++ + ++LGE G+NI H S + ++ +DG
Sbjct: 179 HEITFSTIDRPKLLSQLTSMLGELGLNIQEAHAF-STADGFSLDVFVVDGWSQED 232
>gi|46580023|ref|YP_010831.1| ACT domain-containing protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|46449439|gb|AAS96090.1| ACT domain protein [Desulfovibrio vulgaris str. Hildenborough]
gi|311233978|gb|ADP86832.1| amino acid-binding ACT domain protein [Desulfovibrio vulgaris
RCH1]
Length = 143
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ G + V L E GINI L + + D SVL+
Sbjct: 11 ENKAGRLAEVTGTLAEAGINIRALSLADTSDFGILRLIVN-DHEKAKSVLK 60
>gi|311068212|ref|YP_003973135.1| hypothetical protein BATR1942_06250 [Bacillus atrophaeus 1942]
gi|310868729|gb|ADP32204.1| hypothetical protein BATR1942_06250 [Bacillus atrophaeus 1942]
Length = 263
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 29 VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
+ + G++ + ++LG INI + + ID LE + +
Sbjct: 12 IQVNRPGLLGDISSLLGMLSINIVTINGVDLSRRGMLLRCRHIDQIKR---LESILKTME 68
Query: 89 IRFVKQFE 96
V +
Sbjct: 69 TIKVTKLR 76
>gi|262282154|ref|ZP_06059923.1| acetolactate synthase 3 regulatory subunit [Streptococcus sp.
2_1_36FAA]
gi|262262608|gb|EEY81305.1| acetolactate synthase 3 regulatory subunit [Streptococcus sp.
2_1_36FAA]
Length = 158
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G +++ E + + ID + L V + +
Sbjct: 4 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGTTENPEVSRITIIIDVTSLAEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ V+
Sbjct: 64 QLNRQIDVIRVRDIT 78
>gi|296141649|ref|YP_003648892.1| aspartate kinase [Tsukamurella paurometabola DSM 20162]
gi|296029783|gb|ADG80553.1| aspartate kinase [Tsukamurella paurometabola DSM 20162]
Length = 421
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 19/67 (28%), Gaps = 6/67 (8%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID-----GSILNSVLEKLSV 85
D G V + + INI L + + + G + LE L
Sbjct: 273 EDKPGYAARVFRAIADAEINI-DMVLQNVSKVDTGRTDITFTLPRELGPLGVEKLEALRK 331
Query: 86 NVTIRFV 92
+ V
Sbjct: 332 EIGFDSV 338
>gi|254582835|ref|XP_002499149.1| ZYRO0E04994p [Zygosaccharomyces rouxii]
gi|186703735|emb|CAQ43425.1| Acetolactate synthase small subunit [Zygosaccharomyces rouxii]
gi|238942723|emb|CAR30894.1| ZYRO0E04994p [Zygosaccharomyces rouxii]
Length = 310
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 8/71 (11%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLE 81
++ + + G++ + L G NI + ++ + + + + G ++
Sbjct: 79 HVLNCLVQNEPGVLSRISGTLAARGFNIDSLVVCNTEVKDLSRMTIVLQGQDGVIEQARR 138
Query: 82 KLSVNVTIRFV 92
++ V + V
Sbjct: 139 QIEDLVPVYAV 149
>gi|24378742|ref|NP_720697.1| acetolactate synthase 3 regulatory subunit [Streptococcus mutans
UA159]
gi|24376609|gb|AAN58003.1|AE014872_11 acetolactate synthase, small subunit [Streptococcus mutans UA159]
Length = 160
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LE 81
M+ + G++ +L +NI +G ++ + + ID L V ++
Sbjct: 4 MLTAKLQNSTGVLNRFTGVLSRRQVNIESISVGHTEIPNISRITIIIDVDSLEEVEQIMK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V+
Sbjct: 64 QLNRLIDVVRVRDIT 78
>gi|147669656|ref|YP_001214474.1| homoserine dehydrogenase [Dehalococcoides sp. BAV1]
gi|146270604|gb|ABQ17596.1| homoserine dehydrogenase [Dehalococcoides sp. BAV1]
Length = 433
Score = 34.6 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + +LG++ I+I+ + A + + V + L +
Sbjct: 361 DSPGVLALIAKVLGDHSISISSVIQKETDEKNLTAEIVIMTHPAKEAFVQQALVKLGGLD 420
Query: 91 FVKQFE 96
VK+
Sbjct: 421 KVKEIN 426
>gi|327310454|ref|YP_004337351.1| amino acid-binding ACT domain-containing protein [Thermoproteus
uzoniensis 768-20]
gi|326946933|gb|AEA12039.1| amino acid-binding ACT domain protein [Thermoproteus uzoniensis
768-20]
Length = 215
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
+ +N D GI+ + N+ + NI + + S I F+ ++ LE+
Sbjct: 13 GEFLVELNFDQPGILAALSNVFADSNANILNIAM---DSGRTKIHFIVDVTTVDEQDLEE 69
Query: 83 L-SVNVTIRFVKQFE 96
L FVK+
Sbjct: 70 LPKRLGMFAFVKKVH 84
>gi|284047540|ref|YP_003397879.1| acetolactate synthase, small subunit [Acidaminococcus fermentans
DSM 20731]
gi|283951761|gb|ADB46564.1| acetolactate synthase, small subunit [Acidaminococcus fermentans
DSM 20731]
Length = 167
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEK 82
+ I+ + G++ V ++ INI + G ++ + + + D L+ +++
Sbjct: 6 LAILADNKPGVLTHVAGLISRRAINIEFINAGYTEERDVTRINIVVSVEDRYELDQAIKQ 65
Query: 83 LSVNVTIRFV 92
L+ + + V
Sbjct: 66 LAKLIDVIKV 75
>gi|281357580|ref|ZP_06244067.1| Homoserine dehydrogenase [Victivallis vadensis ATCC BAA-548]
gi|281315837|gb|EFA99863.1| Homoserine dehydrogenase [Victivallis vadensis ATCC BAA-548]
Length = 430
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGSILNSVLEKLSVN 86
D G++ + IL + GI+I+ R ++ + + + L+
Sbjct: 356 KDCPGVIASITQILADKGISISSLIQHERREADGTVPLVILTHVATERDIRSALAEL 412
>gi|262276586|ref|ZP_06054395.1| hypothetical protein VHA_003571 [Grimontia hollisae CIP 101886]
gi|262220394|gb|EEY71710.1| hypothetical protein VHA_003571 [Grimontia hollisae CIP 101886]
Length = 170
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 26/78 (33%), Gaps = 7/78 (8%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST--EHAISFLCIDGSI 75
++D + + D GIV V + ++GINI + + I D I
Sbjct: 81 EMDTTTHTLSVTGNDRPGIVQEVTREIAKFGININNLETNTQSAANFGGVIFNAEFDLDI 140
Query: 76 L-----NSVLEKLSVNVT 88
+ + + L
Sbjct: 141 ANTLSLDDLGDALEQLSD 158
>gi|255263503|ref|ZP_05342845.1| protein-P-II uridylyltransferase [Thalassiobium sp. R2A62]
gi|255105838|gb|EET48512.1| protein-P-II uridylyltransferase [Thalassiobium sp. R2A62]
Length = 921
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 20/81 (24%), Gaps = 7/81 (8%)
Query: 13 QEINFDVDIGR----LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE--HAI 66
EI ++ C D GI + L G N+ S+ A
Sbjct: 717 DEIKIELTPDEDRDATRACFALVDHPGIFGRITGALALVGANVVDARTYTSKDGYVTAAF 776
Query: 67 SFLCIDG-SILNSVLEKLSVN 86
D L +L
Sbjct: 777 WIQDSDDTPYDEDRLPRLRKM 797
>gi|75674332|ref|YP_316753.1| PII uridylyl-transferase [Nitrobacter winogradskyi Nb-255]
gi|91206747|sp|Q3SWE0|GLND_NITWN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|74419202|gb|ABA03401.1| Protein-P-II uridylyltransferase [Nitrobacter winogradskyi Nb-255]
Length = 925
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 5/62 (8%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I D MI + D G++ + + + +NIA H+ E A
Sbjct: 837 VTINNQWSD---RHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATF--GERARDVF 891
Query: 70 CI 71
+
Sbjct: 892 YV 893
>gi|332034731|gb|EGI71276.1| glycine cleavage system transcriptional antiactivator GcvR
[Pseudoalteromonas haloplanktis ANT/505]
Length = 177
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 18/79 (22%), Gaps = 5/79 (6%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV-L 80
+ D G + V + I+I I+ +I V +
Sbjct: 94 AGYTLEYTGIDTPGTLSKVTRFFADNNISICSLKSDTFDEKVDMKMRCEIEFNIPVDVDI 153
Query: 81 EKLS----VNVTIRFVKQF 95
++ V
Sbjct: 154 DQFKISFESLSHTLNVDYI 172
>gi|305674421|ref|YP_003866093.1| hypothetical protein BSUW23_08690 [Bacillus subtilis subsp.
spizizenii str. W23]
gi|305412665|gb|ADM37784.1| conserved hypothetical protein with ACT domain [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 263
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 29 VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
+ + G++ + ++LG INI + + ID LE + +
Sbjct: 12 IQVNRPGLLGDISSLLGMLSINIVTINGVDLSRRGMLLRCRHIDQIKR---LESILKTME 68
Query: 89 IRFVKQFE 96
V +
Sbjct: 69 TIKVTKLR 76
>gi|322436358|ref|YP_004218570.1| acetolactate synthase, small subunit [Acidobacterium sp.
MP5ACTX9]
gi|321164085|gb|ADW69790.1| acetolactate synthase, small subunit [Acidobacterium sp.
MP5ACTX9]
Length = 213
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ D G++ V ++ INI +G S+ + + + ++
Sbjct: 3 HTFVALVQDKPGVLTRVASLFRRLNINIVSLTVGESERPDTSRMTIVC--EAPEHAAHRI 60
Query: 84 SV 85
Sbjct: 61 KA 62
>gi|294862481|sp|O31769|YMFK_BACSU RecName: Full=Uncharacterized protein ymfK
Length = 269
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 29 VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
+ + G++ + ++LG INI + + ID LE + +
Sbjct: 18 IQVNRPGLLGDISSLLGMLSINIVTINGVDLSRRGMLLRCRHIDQIKR---LESILKTME 74
Query: 89 IRFVKQFE 96
V +
Sbjct: 75 TIKVTKLR 82
>gi|270293396|ref|ZP_06199605.1| acetolactate synthase, small subunit [Streptococcus sp. M143]
gi|270278245|gb|EFA24093.1| acetolactate synthase, small subunit [Streptococcus sp. M143]
Length = 158
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G +++ + + + ID + + V + +
Sbjct: 4 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGATENPDVSRITIIIDVASHDEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ ++
Sbjct: 64 QLNRQIDVIRIRDIT 78
>gi|225076041|ref|ZP_03719240.1| hypothetical protein NEIFLAOT_01073 [Neisseria flavescens
NRL30031/H210]
gi|224952601|gb|EEG33810.1| hypothetical protein NEIFLAOT_01073 [Neisseria flavescens
NRL30031/H210]
Length = 435
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 7/73 (9%), Positives = 23/73 (31%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I + A + ++
Sbjct: 345 PMDEITSSYYLRVQATDEPGTLGQIAALLAKENVSIEALIQKGVINQSTAEIVILTHTTV 404
Query: 76 LNSVLEKLSVNVT 88
++V ++
Sbjct: 405 EHNVKRAIAAIEA 417
>gi|218885551|ref|YP_002434872.1| amino acid-binding ACT domain protein [Desulfovibrio vulgaris
str. 'Miyazaki F']
gi|218756505|gb|ACL07404.1| amino acid-binding ACT domain protein [Desulfovibrio vulgaris
str. 'Miyazaki F']
Length = 143
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
+ G + V + L E GINI L + + D + L++
Sbjct: 11 ENKAGRLAEVTHTLAEAGINIRALSLADTSDFGILRLIVH-DHEKAKAALKE 61
>gi|153217085|ref|ZP_01950849.1| formyltetrahydrofolate deformylase [Vibrio cholerae 1587]
gi|124113887|gb|EAY32707.1| formyltetrahydrofolate deformylase [Vibrio cholerae 1587]
Length = 277
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + + D G++ + NI ++ +NI H + ++ H ++G ++ L
Sbjct: 1 MEKKTLLTHCPDAPGLISKITNICYKHQLNIIHNNEFVDNTSGHFFMRTELEGYFNDATL 60
Query: 81 EKLSVNVTIR 90
L+
Sbjct: 61 --LADLDHAL 68
>gi|57234035|ref|YP_181919.1| homoserine dehydrogenase [Dehalococcoides ethenogenes 195]
gi|57224483|gb|AAW39540.1| homoserine dehydrogenase [Dehalococcoides ethenogenes 195]
Length = 433
Score = 34.6 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + +LG++ I+I+ + A + + V + L +
Sbjct: 361 DSPGVLALIARVLGDHNISISSVIQKETDEENLTAEIVIMTHPAKEAFVQQALVELGGLD 420
Query: 91 FVKQFE 96
VK
Sbjct: 421 KVKDIN 426
>gi|154686107|ref|YP_001421268.1| hypothetical protein RBAM_016740 [Bacillus amyloliquefaciens
FZB42]
gi|154351958|gb|ABS74037.1| hypothetical protein RBAM_016740 [Bacillus amyloliquefaciens
FZB42]
Length = 263
Score = 34.6 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 29 VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
+ + G++ + ++LG INI + + ID LE + +
Sbjct: 12 IQVNRPGLLGDISSLLGMLSINIVTINGVDLSRRGMLLRCRHIDQIKR---LESILKTME 68
Query: 89 IRFVKQFE 96
V +
Sbjct: 69 TIKVTKLR 76
>gi|150008681|ref|YP_001303424.1| acetohydroxyacid synthase small subunit [Parabacteroides
distasonis ATCC 8503]
gi|255014484|ref|ZP_05286610.1| acetohydroxyacid synthase small subunit [Bacteroides sp. 2_1_7]
gi|256841287|ref|ZP_05546794.1| acetolactate synthase, small subunit [Parabacteroides sp. D13]
gi|262383562|ref|ZP_06076698.1| acetolactate synthase, small subunit [Bacteroides sp. 2_1_33B]
gi|149937105|gb|ABR43802.1| acetohydroxyacid synthase small subunit [Parabacteroides
distasonis ATCC 8503]
gi|256737130|gb|EEU50457.1| acetolactate synthase, small subunit [Parabacteroides sp. D13]
gi|262294460|gb|EEY82392.1| acetolactate synthase, small subunit [Bacteroides sp. 2_1_33B]
Length = 184
Score = 34.6 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ I + +I+G++ + I +NI + S + D +++ V++
Sbjct: 7 YTVIIFSENIVGLLNQITIIFTRRQLNIETLSVSPSAIKGIHKFTITTFADEDMIDKVVK 66
Query: 82 KLSVNVTIRFV 92
++ V I
Sbjct: 67 QIDKRVDILKA 77
>gi|315606024|ref|ZP_07881055.1| formyltetrahydrofolate deformylase [Actinomyces sp. oral taxon 180
str. F0310]
gi|315312306|gb|EFU60392.1| formyltetrahydrofolate deformylase [Actinomyces sp. oral taxon 180
str. F0310]
Length = 311
Score = 34.6 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 19/66 (28%), Gaps = 5/66 (7%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG-----SILNSVLEKLSVN 86
D GIV V ++GE G N+ T + +D I +
Sbjct: 42 DRPGIVHAVTGVIGESGGNVVQSQQFGDSDTGTFFMRVEVDSPKGRAPIDEGLAAVAEEF 101
Query: 87 VTIRFV 92
V
Sbjct: 102 DATYRV 107
>gi|312879416|ref|ZP_07739216.1| acetolactate synthase, small subunit [Aminomonas paucivorans DSM
12260]
gi|310782707|gb|EFQ23105.1| acetolactate synthase, small subunit [Aminomonas paucivorans DSM
12260]
Length = 179
Score = 34.6 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLEK 82
+ ++ D G+++ + ++ G NI +GR+ +T + + D ++ + ++
Sbjct: 4 TLSVLTEDHPGVLMRIAGLIYRRGYNIESLSVGRTDTTGFSRFTVVVEADERGMSLLAKQ 63
Query: 83 LSVNVTIRFVKQFE 96
L V + V++
Sbjct: 64 LERLVEVVTVEELS 77
>gi|262404346|ref|ZP_06080901.1| formyltetrahydrofolate deformylase [Vibrio sp. RC586]
gi|262349378|gb|EEY98516.1| formyltetrahydrofolate deformylase [Vibrio sp. RC586]
Length = 277
Score = 34.6 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + + D G++ + NI ++ +NI H + ++ H ++G ++ L
Sbjct: 1 MEKKTLLTHCPDAPGLISKITNICYKHQLNIIHNNEFVDNTSGHFFMRTELEGYFNDATL 60
Query: 81 EKLSVNVTIR 90
L+
Sbjct: 61 --LADLDHAL 68
>gi|258621245|ref|ZP_05716279.1| Formyltetrahydrofolate deformylase [Vibrio mimicus VM573]
gi|258586633|gb|EEW11348.1| Formyltetrahydrofolate deformylase [Vibrio mimicus VM573]
Length = 277
Score = 34.6 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + + D G++ + NI ++ +NI H + ++ H ++G ++ L
Sbjct: 1 MEKKTLLTHCPDAPGLISKITNICYKHQLNIIHNNEFVDNTSGHFFMRTELEGYFNDATL 60
Query: 81 EKLSVNVTIR 90
L+
Sbjct: 61 --LADLDHAL 68
>gi|193214224|ref|YP_001995423.1| (p)ppGpp synthetase I, SpoT/RelA [Chloroherpeton thalassium ATCC
35110]
gi|193087701|gb|ACF12976.1| (p)ppGpp synthetase I, SpoT/RelA [Chloroherpeton thalassium ATCC
35110]
Length = 744
Score = 34.6 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKLS 84
+ I+ D++G+ + ++ + INI L S S L + D + LN + EK+
Sbjct: 671 LKILGEDVIGMTNKITEVILKSDINIRSISLDASDSLFEGNVLLYVKDVATLNRLAEKIK 730
Query: 85 VNVTIRFV 92
I V
Sbjct: 731 RIKGILSV 738
>gi|189219756|ref|YP_001940397.1| Acetolactate synthase, small subunit [Methylacidiphilum
infernorum V4]
gi|189186614|gb|ACD83799.1| Acetolactate synthase, small subunit [Methylacidiphilum
infernorum V4]
Length = 157
Score = 34.6 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ I+ A+ G++ + + G NI ++G + + + + D +L+ V +
Sbjct: 3 HTLSILVANRFGVLTRIAELFSGRGFNIDTLNVGPTHDESISRMTIVVKGDDQVLDQVTK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 63 QLNKLIDVLAV 73
>gi|108807638|ref|YP_651554.1| acetolactate synthase 1 regulatory subunit [Yersinia pestis
Antiqua]
gi|108811918|ref|YP_647685.1| acetolactate synthase 1 regulatory subunit [Yersinia pestis
Nepal516]
gi|149365793|ref|ZP_01887828.1| putative acetolactate synthase small subunit [Yersinia pestis
CA88-4125]
gi|165927173|ref|ZP_02223005.1| acetolactate synthase Isozyme i small subunit
(ahas-i)(acetohydroxy-acid synthase i small subunit)
(als-i) [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165938595|ref|ZP_02227151.1| acetolactate synthase Isozyme i small subunit
(ahas-i)(acetohydroxy-acid synthase i small subunit)
(als-i) [Yersinia pestis biovar Orientalis str. IP275]
gi|166010654|ref|ZP_02231552.1| acetolactate synthase Isozyme i small subunit
(ahas-i)(acetohydroxy-acid synthase i small subunit)
(als-i) [Yersinia pestis biovar Antiqua str. E1979001]
gi|167400782|ref|ZP_02306288.1| acetolactate synthase Isozyme i small subunit
(ahas-i)(acetohydroxy-acid synthase i small subunit)
(als-i) [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167422107|ref|ZP_02313860.1| acetolactate synthase Isozyme i small subunit
(ahas-i)(acetohydroxy-acid synthase i small subunit)
(als-i) [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425043|ref|ZP_02316796.1| acetolactate synthase Isozyme i small subunit
(ahas-i)(acetohydroxy-acid synthase i small subunit)
(als-i) [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|218929386|ref|YP_002347261.1| acetolactate synthase 1 regulatory subunit [Yersinia pestis CO92]
gi|229837811|ref|ZP_04457970.1| acetolactate synthase I, small subunit [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229898372|ref|ZP_04513519.1| acetolactate synthase I, small subunit [Yersinia pestis biovar
Orientalis str. India 195]
gi|229902219|ref|ZP_04517340.1| acetolactate synthase I, small subunit [Yersinia pestis Nepal516]
gi|294503687|ref|YP_003567749.1| acetolactate synthase small subunit [Yersinia pestis Z176003]
gi|108775566|gb|ABG18085.1| acetolactate synthase, small subunit [Yersinia pestis Nepal516]
gi|108779551|gb|ABG13609.1| acetolactate synthase, small subunit [Yersinia pestis Antiqua]
gi|115347997|emb|CAL20922.1| putative acetolactate synthase small subunit [Yersinia pestis
CO92]
gi|149292206|gb|EDM42280.1| putative acetolactate synthase small subunit [Yersinia pestis
CA88-4125]
gi|165913469|gb|EDR32090.1| acetolactate synthase Isozyme i small subunit
(ahas-i)(acetohydroxy-acid synthase i small subunit)
(als-i) [Yersinia pestis biovar Orientalis str. IP275]
gi|165920841|gb|EDR38089.1| acetolactate synthase Isozyme i small subunit
(ahas-i)(acetohydroxy-acid synthase i small subunit)
(als-i) [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165990356|gb|EDR42657.1| acetolactate synthase Isozyme i small subunit
(ahas-i)(acetohydroxy-acid synthase i small subunit)
(als-i) [Yersinia pestis biovar Antiqua str. E1979001]
gi|166958919|gb|EDR55940.1| acetolactate synthase Isozyme i small subunit
(ahas-i)(acetohydroxy-acid synthase i small subunit)
(als-i) [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049635|gb|EDR61043.1| acetolactate synthase Isozyme i small subunit
(ahas-i)(acetohydroxy-acid synthase i small subunit)
(als-i) [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167056230|gb|EDR66008.1| acetolactate synthase Isozyme i small subunit
(ahas-i)(acetohydroxy-acid synthase i small subunit)
(als-i) [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229681115|gb|EEO77210.1| acetolactate synthase I, small subunit [Yersinia pestis Nepal516]
gi|229688662|gb|EEO80731.1| acetolactate synthase I, small subunit [Yersinia pestis biovar
Orientalis str. India 195]
gi|229694177|gb|EEO84224.1| acetolactate synthase I, small subunit [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|262362194|gb|ACY58915.1| acetolactate synthase small subunit [Yersinia pestis D106004]
gi|262365528|gb|ACY62085.1| acetolactate synthase small subunit [Yersinia pestis D182038]
gi|294354146|gb|ADE64487.1| acetolactate synthase small subunit [Yersinia pestis Z176003]
gi|320014949|gb|ADV98520.1| acetolactate synthase I, small subunit [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 100
Score = 34.6 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSV 79
R+ + + + G++ + + N+ S E + +L + D L +
Sbjct: 7 PTRVTLLLTVRNHPGVMSHICGLFARRAFNVEGILCMPLPSGEESRIWLQVLDDQRLLQM 66
Query: 80 LEKLSVNVTIRFVK 93
+ +L V + V+
Sbjct: 67 ISQLEKLVDVLQVR 80
>gi|326390128|ref|ZP_08211689.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus JW
200]
gi|325993776|gb|EGD52207.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus JW
200]
Length = 719
Score = 34.2 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID---GSILNSVLEKLS 84
I+ D G++ V ++L + I + + R+ AI L ++ L V+ KL
Sbjct: 648 IMANDRFGLLTEVTSVLADVKIAVKAVN-ARTTRDNIAIINLTLEITSKEQLEKVMNKLK 706
Query: 85 VNVTIRFV 92
+ V
Sbjct: 707 ALEGVMDV 714
>gi|323697709|ref|ZP_08109621.1| amino acid-binding ACT domain protein [Desulfovibrio sp. ND132]
gi|323457641|gb|EGB13506.1| amino acid-binding ACT domain protein [Desulfovibrio desulfuricans
ND132]
Length = 143
Score = 34.2 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
D G + + ++L E GIN+ + + QS + A+ D + +E L
Sbjct: 77 NDQPGGLHTILSMLQEAGINVEYMYAFVQQSGDSAVLIFRFDR--TDQGIELLKK 129
>gi|291287780|ref|YP_003504596.1| amino acid-binding ACT domain protein [Denitrovibrio acetiphilus
DSM 12809]
gi|290884940|gb|ADD68640.1| amino acid-binding ACT domain protein [Denitrovibrio acetiphilus
DSM 12809]
Length = 144
Score = 34.2 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ-STEHAISFLCIDGSILNSVLEKLS 84
+ +V +D G + + L + IN+ + + + E AI D + EKL+
Sbjct: 72 LAVVVSDHPGGLAQILGCLDKNSINVEYMYAFVDHLAKERAIMIFRFDD--TDMAAEKLA 129
Query: 85 VNVTIRFVKQFEF 97
FVKQ +
Sbjct: 130 E-DGFSFVKQVDI 141
>gi|158333956|ref|YP_001515128.1| aspartate kinase [Acaryochloris marina MBIC11017]
gi|158304197|gb|ABW25814.1| asparate kinase, monofunctional class [Acaryochloris marina
MBIC11017]
Length = 590
Score = 34.2 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 33/89 (37%), Gaps = 10/89 (11%)
Query: 12 IQEINFDVDIGRLMICIVNA-DILGIVVFVGNILGEYGINIAHFHLGRSQS-------TE 63
++ + D+ + + I N D G+ + +L + I++ + +
Sbjct: 433 VRGVALDL--EQAQLAIRNVPDRPGMAAHIFQVLAKRNISVDMIIQSQRSRQVEGQITRD 490
Query: 64 HAISFLCIDGSILNSVLEKLSVNVTIRFV 92
A + D + +L+ LS N+ V
Sbjct: 491 IAFTVAEGDLEVAKGLLQDLSRNLGCGEV 519
>gi|116670844|ref|YP_831777.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrobacter sp. FB24]
gi|116610953|gb|ABK03677.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrobacter sp. FB24]
Length = 797
Score = 34.2 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 12/92 (13%)
Query: 8 RFIKIQEINFDVDIGRLMICIV-----NADILGIVVFVGNILGEYGINI--AHFHLGRSQ 60
R ++ + + + +V D ++ V IL E +NI A H +
Sbjct: 701 RIVE-----VEWAPTQSSVFLVEIQVEALDRKSLLSDVTRILSENHVNILAASVHTSTDR 755
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+F D L+ VL + + V
Sbjct: 756 VAISKFAFEMGDPKYLSHVLSAVRRIDGVFDV 787
>gi|309378125|emb|CBX23234.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 381
Score = 34.2 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 7/77 (9%), Positives = 22/77 (28%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I A + ++
Sbjct: 291 PMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQTTAEIVILTHSTV 350
Query: 76 LNSVLEKLSVNVTIRFV 92
+ ++ + V
Sbjct: 351 EKRIKSAIAGIEALVCV 367
>gi|256788629|ref|ZP_05527060.1| prephenate dehydrogenase [Streptomyces lividans TK24]
gi|289772524|ref|ZP_06531902.1| prephenate dehydrogenase [Streptomyces lividans TK24]
gi|289702723|gb|EFD70152.1| prephenate dehydrogenase [Streptomyces lividans TK24]
Length = 361
Score = 34.2 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 7/82 (8%), Positives = 25/82 (30%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+++ + + ++ D G + + G G+N+ + + + + L
Sbjct: 279 VRVPGKHGSAPRSYETVAVLIDDQPGQLARIFADAGRAGVNVEDVRIEHATGQQAGLVQL 338
Query: 70 CIDGSILNSVLEKLSVNVTIRF 91
++ + L
Sbjct: 339 MVEPKAAAVLTAALKERGWAIR 360
>gi|218710196|ref|YP_002417817.1| formyltetrahydrofolate deformylase [Vibrio splendidus LGP32]
gi|218323215|emb|CAV19392.1| Formyltetrahydrofolate deformylase [Vibrio splendidus LGP32]
Length = 277
Score = 34.2 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 25/60 (41%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ R + D G++ + NI ++ +NI H + ++ H ++G + L
Sbjct: 1 MERKTLLTHCTDAPGLISKITNICYKHQLNIIHNNEFVDNTSGHFFMRTELEGYFNDETL 60
>gi|212224476|ref|YP_002307712.1| hypothetical protein TON_1325 [Thermococcus onnurineus NA1]
gi|212009433|gb|ACJ16815.1| Hypothetical regulator of amino acid metabolism [Thermococcus
onnurineus NA1]
Length = 135
Score = 34.2 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID----GSILNSVLEKLSVN 86
D G++ + + G++G NI + E A ID L + +L
Sbjct: 64 DDKPGVLAKISGLFGKHGANILFSESEELEGIELAGIVAVIDVSGMSGTLEELRGELEAL 123
Query: 87 VTIRFV--KQFE 96
++ V + E
Sbjct: 124 KEVKEVVLRPLE 135
>gi|22126015|ref|NP_669438.1| acetolactate synthase 1 regulatory subunit [Yersinia pestis KIM
10]
gi|21958963|gb|AAM85689.1|AE013815_8 acetolactate synthase I, valine sensitive, small subunit
[Yersinia pestis KIM 10]
Length = 105
Score = 34.2 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSV 79
R+ + + + G++ + + N+ S E + +L + D L +
Sbjct: 12 PTRVTLLLTVRNHPGVMSHICGLFARRAFNVEGILCMPLPSGEESRIWLQVLDDQRLLQM 71
Query: 80 LEKLSVNVTIRFVK 93
+ +L V + V+
Sbjct: 72 ISQLEKLVDVLQVR 85
>gi|54026489|ref|YP_120731.1| hypothetical protein nfa45160 [Nocardia farcinica IFM 10152]
gi|54017997|dbj|BAD59367.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 246
Score = 34.2 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
I + D G + + L ++ +NI H+ R +S
Sbjct: 74 APALWRIRVRLDDRPGRLEALTARLADHAVNILAVHVHRLESG 116
>gi|47094426|ref|ZP_00232112.1| GTP pyrophosphokinase [Listeria monocytogenes str. 4b H7858]
gi|47017201|gb|EAL08048.1| GTP pyrophosphokinase [Listeria monocytogenes str. 4b H7858]
Length = 724
Score = 34.2 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ N D++I + G++ + ++ NI + + +
Sbjct: 645 NDYNVDIEIYGY-------NRNGLLNDILQVINSLTSNINGVNAKVDNNKMATLVVTLQI 697
Query: 73 GSIL--NSVLEKLSVNVTIRFVKQF 95
+I V++K+ + V++
Sbjct: 698 HNINHLQRVVDKIKQIPDVYTVRRL 722
>gi|307266555|ref|ZP_07548087.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306918409|gb|EFN48651.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 719
Score = 34.2 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID---GSILNSVLEKLS 84
I+ D G++ V ++L + I + + R+ AI L ++ L V+ KL
Sbjct: 648 IMANDRFGLLTEVTSVLADVKIAVKAVN-ARTTRDNIAIINLTLEITSKEQLEKVMNKLK 706
Query: 85 VNVTIRFV 92
+ V
Sbjct: 707 ALEGVMDV 714
>gi|303285674|ref|XP_003062127.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456538|gb|EEH53839.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 272
Score = 34.2 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 10/75 (13%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS--TEHAISFLCIDGSILNSV--- 79
I + D G++ + L + GINI + ++ + + + I
Sbjct: 181 RIVLHGTDYPGLLHEMAGSLAQEGINIEAINTDTQKAPFGDDDLFTVDAVVEIPADADIA 240
Query: 80 -----LEKLSVNVTI 89
L++L + +
Sbjct: 241 RFKKSLDRLKQKLGV 255
>gi|237653736|ref|YP_002890050.1| acetolactate synthase 1 regulatory subunit [Thauera sp. MZ1T]
gi|237624983|gb|ACR01673.1| amino acid-binding ACT domain protein [Thauera sp. MZ1T]
Length = 104
Score = 34.2 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 7/64 (10%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS-FLCIDGSILNSVLEKLSVNVTI 89
+ G++ + N+ N+ + + L + L ++ +L +
Sbjct: 24 NNHPGVMSHICNLFARRAFNVEGILCMPVSDGKRSRIWLLVFEDQRLEQMVRQLEKLEDV 83
Query: 90 RFVK 93
V+
Sbjct: 84 LNVR 87
>gi|34499157|ref|NP_903372.1| GTP diphosphokinase [Chromobacterium violaceum ATCC 12472]
gi|34105008|gb|AAQ61364.1| GTP diphosphokinase [Chromobacterium violaceum ATCC 12472]
Length = 734
Score = 34.2 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 32/82 (39%), Gaps = 8/82 (9%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGIN-IAHFHLGRSQSTEHAISFLCIDG 73
D++ +++ D G++ + ++L +N I L R + ++
Sbjct: 660 FPIDIE-------VMSQDRPGLLRDISDVLSREKLNLIGVNTLSRDLKSRLRLTVEVRQV 712
Query: 74 SILNSVLEKLSVNVTIRFVKQF 95
++ VL +L ++ ++
Sbjct: 713 QDISRVLSRLMELSGVQEARRV 734
>gi|323344220|ref|ZP_08084446.1| acetohydroxyacid synthase small subunit [Prevotella oralis ATCC
33269]
gi|323094949|gb|EFZ37524.1| acetohydroxyacid synthase small subunit [Prevotella oralis ATCC
33269]
Length = 183
Score = 34.2 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 6/69 (8%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + + ++ GI+ + + +NI ++ S + + + +++
Sbjct: 6 YTLLVYSENVAGILNQITAVFTRRQMNIESLNVSASSIKGIHKYTITVWCA-PEEIIKIT 64
Query: 84 SVNVTIRFV 92
V
Sbjct: 65 KQIEKKIDV 73
>gi|298376017|ref|ZP_06985973.1| acetolactate synthase, small subunit [Bacteroides sp. 3_1_19]
gi|298267054|gb|EFI08711.1| acetolactate synthase, small subunit [Bacteroides sp. 3_1_19]
Length = 184
Score = 34.2 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ I + +I+G++ + I +NI + S + D +++ V++
Sbjct: 7 YTVIIFSENIVGLLNQITIIFTRRQLNIETLSVSPSAIKGIHKFTITTFADEDMIDKVVK 66
Query: 82 KLSVNVTIRFV 92
++ V I
Sbjct: 67 QIDKRVDILKA 77
>gi|292655659|ref|YP_003535556.1| acetolactate synthase small subunit [Haloferax volcanii DS2]
gi|291372387|gb|ADE04614.1| acetolactate synthase, small subunit [Haloferax volcanii DS2]
Length = 218
Score = 34.2 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLEKLSVNVT 88
D G++ V + NI +G + +H+ + ++ + + ++L+
Sbjct: 50 EDEPGVLSRVAGLAARRQFNIESLTVGPTTVEDHSRITMVVEEPEPGIDQIEKQLAKLKP 109
Query: 89 IRFV 92
+ V
Sbjct: 110 VISV 113
>gi|291295220|ref|YP_003506618.1| CBS domain-containing protein [Meiothermus ruber DSM 1279]
gi|290470179|gb|ADD27598.1| CBS domain containing protein [Meiothermus ruber DSM 1279]
Length = 211
Score = 34.2 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
D G + + L + INI S I+ + +D + L
Sbjct: 142 DDRPGELARLSGELAQQHINIHSLLTYPSGE-GTVITVVRVDTLDARKIARSLRQ 195
>gi|260587875|ref|ZP_05853788.1| prephenate dehydrogenase [Blautia hansenii DSM 20583]
gi|331083876|ref|ZP_08332985.1| hypothetical protein HMPREF0992_01909 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260542140|gb|EEX22709.1| prephenate dehydrogenase [Blautia hansenii DSM 20583]
gi|330403301|gb|EGG82861.1| hypothetical protein HMPREF0992_01909 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 365
Score = 34.2 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
+ D G + + IL I+I + L + + + D L LE+L+
Sbjct: 297 LYCDIIDETGSIATIATILSMNNISIKNIGILHNREFEDGVLKIEFYDEDALKQALEQLT 356
Query: 85 V 85
Sbjct: 357 K 357
>gi|209550114|ref|YP_002282031.1| acetolactate synthase 3 regulatory subunit [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|209535870|gb|ACI55805.1| acetolactate synthase, small subunit [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 190
Score = 34.2 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
I + I+ + G++ V + G NI + + +S + I
Sbjct: 19 AAIESHTLSILVDNEPGVLARVIGLFSGRGYNIESLTVS-ETEHQAHLSRITIVTRGTPH 77
Query: 79 VLEKLSV-NVTIRFV-KQFEFNV 99
VLE++ I V + + V
Sbjct: 78 VLEQIKAQLERIVPVHRVVDLTV 100
>gi|301311496|ref|ZP_07217423.1| acetolactate synthase, small subunit [Bacteroides sp. 20_3]
gi|300830582|gb|EFK61225.1| acetolactate synthase, small subunit [Bacteroides sp. 20_3]
Length = 184
Score = 34.2 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ I + +I+G++ + I +NI + S + D +++ V++
Sbjct: 7 YTVIIFSENIVGLLNQITIIFTRRQLNIETLSVSPSAIKGIHKFTITTFADEDMIDKVVK 66
Query: 82 KLSVNVTIRFV 92
++ V I
Sbjct: 67 QIDKRVDILKA 77
>gi|296330903|ref|ZP_06873378.1| hypothetical protein BSU6633_07381 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|321315455|ref|YP_004207742.1| hypothetical protein BSn5_20555 [Bacillus subtilis BSn5]
gi|291484244|dbj|BAI85319.1| hypothetical protein BSNT_02736 [Bacillus subtilis subsp. natto
BEST195]
gi|296151908|gb|EFG92782.1| hypothetical protein BSU6633_07381 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|320021729|gb|ADV96715.1| hypothetical protein BSn5_20555 [Bacillus subtilis BSn5]
Length = 263
Score = 34.2 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 29 VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
+ + G++ + ++LG INI + + ID LE + +
Sbjct: 12 IQVNRPGLLGDISSLLGMLSINIVTINGVDLSRRGMLLRCRHIDQIKR---LESILKTME 68
Query: 89 IRFVKQFE 96
V +
Sbjct: 69 TIKVTKLR 76
>gi|293364257|ref|ZP_06610983.1| acetolactate synthase small subunit [Streptococcus oralis ATCC
35037]
gi|307702512|ref|ZP_07639466.1| acetolactate synthase, small subunit [Streptococcus oralis ATCC
35037]
gi|315612514|ref|ZP_07887427.1| acetolactate synthase small subunit [Streptococcus sanguinis ATCC
49296]
gi|331267040|ref|YP_004326670.1| acetolactate synthase, small subunit [Streptococcus oralis Uo5]
gi|291317103|gb|EFE57530.1| acetolactate synthase small subunit [Streptococcus oralis ATCC
35037]
gi|307623924|gb|EFO02907.1| acetolactate synthase, small subunit [Streptococcus oralis ATCC
35037]
gi|315315495|gb|EFU63534.1| acetolactate synthase small subunit [Streptococcus sanguinis ATCC
49296]
gi|326683712|emb|CBZ01330.1| acetolactate synthase, small subunit [Streptococcus oralis Uo5]
Length = 158
Score = 34.2 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G +++ + + ID + + V + +
Sbjct: 4 MLTARLQNRSGVLNRFTGVLSRRQVNIESISVGATENPNVSRITIIIDVASHDEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ ++
Sbjct: 64 QLNRQIDVIRIRDIT 78
>gi|290581250|ref|YP_003485642.1| acetolactate synthase small subunit [Streptococcus mutans NN2025]
gi|254998149|dbj|BAH88750.1| acetolactate synthase small subunit [Streptococcus mutans NN2025]
Length = 157
Score = 34.2 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LE 81
M+ + G++ +L +NI +G ++ + + ID L V ++
Sbjct: 1 MLTAKLQNSTGVLNRFTGVLSRRQVNIESISVGHTEIPNISRITIIIDVDSLEEVEQIMK 60
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V+
Sbjct: 61 QLNRLIDVVRVRDIT 75
>gi|227495703|ref|ZP_03926014.1| acetolactate synthase [Actinomyces urogenitalis DSM 15434]
gi|226834723|gb|EEH67106.1| acetolactate synthase [Actinomyces urogenitalis DSM 15434]
Length = 170
Score = 34.2 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSV 79
+ + ++ + G++ V + G NI +G ++ + + + D + V
Sbjct: 3 EKHTLSVLVENKPGVLTRVSALFTRRGFNIHSLAVGPTEHEDVSRITVIADAEGLAMEQV 62
Query: 80 LEKLSVNVTIRFV 92
++L+ V + +
Sbjct: 63 TKQLNKLVNVLKI 75
>gi|242310647|ref|ZP_04809802.1| aspartate kinase [Helicobacter pullorum MIT 98-5489]
gi|239523045|gb|EEQ62911.1| aspartate kinase [Helicobacter pullorum MIT 98-5489]
Length = 401
Score = 34.2 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 23/78 (29%), Gaps = 11/78 (14%)
Query: 27 CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK---- 82
D GI + L E IN+ + +D +I LE
Sbjct: 265 ICNVEDRPGIAAEIFGALSEANINV-DMIVQTIGRDGKT----DLDFTIPEVELESTKRV 319
Query: 83 LSVNVTIRFVKQFEFNVD 100
L V+ E++ D
Sbjct: 320 LKAFEG--SVESIEYDSD 335
>gi|254423239|ref|ZP_05036957.1| Homoserine dehydrogenase, NAD binding domain family [Synechococcus
sp. PCC 7335]
gi|196190728|gb|EDX85692.1| Homoserine dehydrogenase, NAD binding domain family [Synechococcus
sp. PCC 7335]
Length = 439
Score = 34.2 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 8/87 (9%), Positives = 27/87 (31%), Gaps = 11/87 (12%)
Query: 15 INFDVDIGR---LMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ D+ + + D G++ +G G Y +++ + + +
Sbjct: 348 YSLDIVPSTEVVTRLYVRLLVKDTPGVIGKLGTCFGRYDVSLESIV--QIGIQNRLVELV 405
Query: 70 CIDGSILN----SVLEKLSVNVTIRFV 92
+ + LE++ + +
Sbjct: 406 VVTHEVSEGAFQQALEEIRQFPEVTDI 432
>gi|134098602|ref|YP_001104263.1| GTP pyrophosphokinase [Saccharopolyspora erythraea NRRL 2338]
gi|291008201|ref|ZP_06566174.1| GTP pyrophosphokinase [Saccharopolyspora erythraea NRRL 2338]
gi|133911225|emb|CAM01338.1| GTP pyrophosphokinase [Saccharopolyspora erythraea NRRL 2338]
Length = 771
Score = 34.2 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 4/64 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN---SVLEKLSVNVT 88
D ++ V +L + +NI + + A+S + VL+ +
Sbjct: 702 DRHRLLSDVTKVLADERVNILSASV-TTSKDRVAVSRFSFEMGDPKHLGHVLKAVRNIEG 760
Query: 89 IRFV 92
+ V
Sbjct: 761 VYDV 764
>gi|327298779|ref|XP_003234083.1| hypothetical protein TERG_05950 [Trichophyton rubrum CBS 118892]
gi|326464261|gb|EGD89714.1| hypothetical protein TERG_05950 [Trichophyton rubrum CBS 118892]
Length = 349
Score = 34.2 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 12/37 (32%)
Query: 27 CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
D +G ILGE IN+ R S
Sbjct: 143 VFTIDDQADEAGRIGGILGENRINMGGLKTQRKNSIG 179
>gi|306828875|ref|ZP_07462067.1| acetolactate synthase small subunit [Streptococcus mitis ATCC
6249]
gi|304429053|gb|EFM32141.1| acetolactate synthase small subunit [Streptococcus mitis ATCC
6249]
Length = 158
Score = 34.2 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G ++ + + ID + + V + +
Sbjct: 4 MLTARLQNRSGVLNRFTGVLSRRQVNIESISVGATEDPNVSRITIIIDVASHDEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ ++
Sbjct: 64 QLNRQIDVIRIRDIT 78
>gi|258626523|ref|ZP_05721363.1| Formyltetrahydrofolate deformylase [Vibrio mimicus VM603]
gi|262166099|ref|ZP_06033836.1| formyltetrahydrofolate deformylase [Vibrio mimicus VM223]
gi|262171020|ref|ZP_06038698.1| formyltetrahydrofolate deformylase [Vibrio mimicus MB-451]
gi|258581234|gb|EEW06143.1| Formyltetrahydrofolate deformylase [Vibrio mimicus VM603]
gi|261892096|gb|EEY38082.1| formyltetrahydrofolate deformylase [Vibrio mimicus MB-451]
gi|262025815|gb|EEY44483.1| formyltetrahydrofolate deformylase [Vibrio mimicus VM223]
Length = 277
Score = 34.2 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + + D G++ + NI ++ +NI H + ++ H ++G ++ L
Sbjct: 1 MEKKTLLTHCPDAPGLISKITNICYKHQLNIIHNNEFVDNTSGHFFMRTELEGYFNDATL 60
Query: 81 EKLSVNVTIR 90
L+
Sbjct: 61 --LADLDHAL 68
>gi|217077705|ref|YP_002335423.1| CBS domain pair protein [Thermosipho africanus TCF52B]
gi|217037560|gb|ACJ76082.1| CBS domain pair protein [Thermosipho africanus TCF52B]
Length = 200
Score = 34.2 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 21/68 (30%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
I + D G + V ++L +NI + + + + + L
Sbjct: 125 QGTRIILELEDKPGELKRVIDVLANNKMNILSILTLKDDNKRQVSIKIQCEDPESVANLL 184
Query: 82 KLSVNVTI 89
++ I
Sbjct: 185 EIYNIKYI 192
>gi|126179021|ref|YP_001046986.1| acetolactate synthase, small subunit [Methanoculleus marisnigri
JR1]
gi|125861815|gb|ABN57004.1| acetolactate synthase, small subunit [Methanoculleus marisnigri
JR1]
Length = 167
Score = 34.2 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVL 80
+ ++ + G++ V + G NI +G + + + + D I+ ++
Sbjct: 3 PHTLSVLVENRAGVLSRVAAMFSRRGFNIESLAVGTCEEPNMSRITIVVNGDDGIVEQMM 62
Query: 81 EKLSVNVTIRFVKQFE 96
++ + + + V
Sbjct: 63 KQTNKLIDVIKVSDLT 78
>gi|46907751|ref|YP_014140.1| GTP pyrophosphokinase [Listeria monocytogenes str. 4b F2365]
gi|226224124|ref|YP_002758231.1| (p)ppGpp synthetase [Listeria monocytogenes Clip81459]
gi|254824418|ref|ZP_05229419.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J1-194]
gi|254852146|ref|ZP_05241494.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-503]
gi|254931458|ref|ZP_05264817.1| GTP pyrophosphokinase [Listeria monocytogenes HPB2262]
gi|300764810|ref|ZP_07074800.1| GTP pyrophosphokinase [Listeria monocytogenes FSL N1-017]
gi|46881020|gb|AAT04317.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
F2365]
gi|225876586|emb|CAS05295.1| Putative (p)ppGpp synthetase [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258605450|gb|EEW18058.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-503]
gi|293583010|gb|EFF95042.1| GTP pyrophosphokinase [Listeria monocytogenes HPB2262]
gi|293593653|gb|EFG01414.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J1-194]
gi|300514486|gb|EFK41543.1| GTP pyrophosphokinase [Listeria monocytogenes FSL N1-017]
gi|328465560|gb|EGF36789.1| (p)ppGpp synthetase [Listeria monocytogenes 1816]
Length = 738
Score = 34.2 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ N D++I + G++ + ++ NI + + +
Sbjct: 659 NDYNVDIEIYGY-------NRNGLLNDILQVINSLTSNINGVNAKVDNNKMATLVVTLQI 711
Query: 73 GSIL--NSVLEKLSVNVTIRFVKQF 95
+I V++K+ + V++
Sbjct: 712 HNINHLQRVVDKIKQIPDVYTVRRL 736
>gi|31340546|ref|NP_733544.1| prephenate dehydrogenase [Streptomyces coelicolor A3(2)]
gi|24413756|emb|CAD55177.1| putative cyclohexadienyl dehydrogenase [Streptomyces coelicolor
A3(2)]
Length = 361
Score = 34.2 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 7/82 (8%), Positives = 25/82 (30%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+++ + + ++ D G + + G G+N+ + + + + L
Sbjct: 279 VRVPGKHGSAPRSYETVAVLIDDQPGQLARIFADAGRAGVNVEDVRIEHATGQQAGLVQL 338
Query: 70 CIDGSILNSVLEKLSVNVTIRF 91
++ + L
Sbjct: 339 MVEPKAAAVLTAALKERGWAIR 360
>gi|67903758|ref|XP_682135.1| hypothetical protein AN8866.2 [Aspergillus nidulans FGSC A4]
gi|40740964|gb|EAA60154.1| hypothetical protein AN8866.2 [Aspergillus nidulans FGSC A4]
Length = 548
Score = 34.2 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 5/30 (16%), Positives = 16/30 (53%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGI 49
+ + ++ ++ G++ V ILG++ +
Sbjct: 465 EPDHARVIYIHHNVPGVLRKVNEILGDHNV 494
>gi|325955369|ref|YP_004239029.1| (p)ppGpp synthetase I, SpoT/RelA [Weeksella virosa DSM 16922]
gi|323437987|gb|ADX68451.1| (p)ppGpp synthetase I, SpoT/RelA [Weeksella virosa DSM 16922]
Length = 748
Score = 34.2 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 34/90 (37%), Gaps = 8/90 (8%)
Query: 8 RFIK---IQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYG-INIAHFHLGRSQSTE 63
R IK I D ++ + D G++ + ++ + IN+ + +
Sbjct: 656 RIIKATWIDSTKKDFKA---ILNLEGLDRSGMISDITLVISKNNSINMTNINFSEQAGVF 712
Query: 64 HAISFLCI-DGSILNSVLEKLSVNVTIRFV 92
I L + + L V+++L ++ V
Sbjct: 713 QGIISLLVKNKEQLEHVIDELKKVEGVKHV 742
>gi|289434803|ref|YP_003464675.1| GTP pyrophosphokinase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171047|emb|CBH27589.1| GTP pyrophosphokinase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 738
Score = 34.2 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ N D++I + G++ + ++ NI + + +
Sbjct: 659 NDYNVDIEIYGY-------NRNGLLNDILQVINSLTSNINGVNAKVDNNKMATLVVTLQI 711
Query: 73 GSIL--NSVLEKLSVNVTIRFVKQF 95
+I V++K+ + V++
Sbjct: 712 HNINHLQRVVDKIKQIPDVYTVRRL 736
>gi|217964330|ref|YP_002350008.1| GTP pyrophosphokinase (ATP:GTP 3-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Listeria
monocytogenes HCC23]
gi|290893882|ref|ZP_06556860.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J2-071]
gi|217333600|gb|ACK39394.1| GTP pyrophosphokinase (ATP:GTP 3-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Listeria
monocytogenes HCC23]
gi|290556599|gb|EFD90135.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J2-071]
gi|307571104|emb|CAR84283.1| GTP pyrophosphokinase [Listeria monocytogenes L99]
Length = 738
Score = 34.2 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ N D++I + G++ + ++ NI + + +
Sbjct: 659 NDYNVDIEIYGY-------NRNGLLNDILQVINSLTSNINGVNAKVDNNKMATLVVTLQI 711
Query: 73 GSIL--NSVLEKLSVNVTIRFVKQF 95
+I V++K+ + V++
Sbjct: 712 HNINHLQRVVDKIKQIPDVYTVRRL 736
>gi|169627447|ref|YP_001701096.1| aspartate kinase [Mycobacterium abscessus ATCC 19977]
gi|169239414|emb|CAM60442.1| Aspartate kinase [Mycobacterium abscessus]
Length = 421
Score = 34.2 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 22/78 (28%), Gaps = 6/78 (7%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-----DGS 74
+ + D+ G V + + INI L E + + +G
Sbjct: 262 RGEAKVTVVGIPDVPGYAAKVFRAVADAEINI-DMVLQNVSKVEDGKTDITFTCPKENGP 320
Query: 75 ILNSVLEKLSVNVTIRFV 92
L+ L + V
Sbjct: 321 TAVEKLDSLKNEIGFSQV 338
>gi|209548596|ref|YP_002280513.1| (p)ppGpp synthetase I, SpoT/RelA [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534352|gb|ACI54287.1| (p)ppGpp synthetase I, SpoT/RelA [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 744
Score = 34.2 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I + + G + V + +NI + R + + L + D LN +L
Sbjct: 670 RIMVNGLNEPGTLAKVAQTVAGLDVNIRLLNTVRVAA-DFTEMMLEVEVWDLRQLNQLLA 728
Query: 82 KLSVNVTIRFVKQF 95
++ I V++
Sbjct: 729 QMKELDCIATVRRL 742
>gi|187479146|ref|YP_787171.1| acetolactate synthase 3 regulatory subunit [Bordetella avium
197N]
gi|115423733|emb|CAJ50283.1| acetolactate synthase isozyme III small subunit [Bordetella avium
197N]
Length = 163
Score = 34.2 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+I ++ + G + V + G NI + ++ + +S L + + V+E++
Sbjct: 3 HVISVLMENEPGALSRVVGLFSARGYNIETLTVAPTE--DATLSRLTVVTVGSDEVIEQI 60
Query: 84 SVN 86
+ +
Sbjct: 61 TKH 63
>gi|21228477|ref|NP_634399.1| hypothetical protein MM_2375 [Methanosarcina mazei Go1]
gi|20906959|gb|AAM32071.1| conserved protein [Methanosarcina mazei Go1]
Length = 167
Score = 34.2 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 27/58 (46%)
Query: 35 GIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
GI+ V ++ ++ ++I T++ + + D + +++++ +++ V
Sbjct: 107 GILAEVAGLISKHNVSIRQAVSDDPYLTDNPMLTIITDNKVPGDLVDEILKLPSVKGV 164
>gi|119384902|ref|YP_915958.1| acetolactate synthase 3 regulatory subunit [Paracoccus
denitrificans PD1222]
gi|119374669|gb|ABL70262.1| acetolactate synthase, small subunit [Paracoccus denitrificans
PD1222]
Length = 186
Score = 34.2 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ ++ + G++ V + G NI + H S + I +V+E
Sbjct: 27 ESHTLAVLVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHLGH-RSRITIVTRGTPAVIE 85
Query: 82 KLSV 85
++
Sbjct: 86 QIKA 89
>gi|319408278|emb|CBI81931.1| GTP pyrophosphokinase [Bartonella schoenbuchensis R1]
Length = 742
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGR--SQSTEHAISFLCIDGSILNSVLEK 82
I I + G + V ++ NI + L R S TE + D LN +L +
Sbjct: 668 RINIWAVNSPGSLAKVTQVIFANDANIQNLSLIRMVSDFTEIVLDLEVWDLKHLNRILSQ 727
Query: 83 LSVNVTIRFVKQFE 96
L ++ V +
Sbjct: 728 LKETGSVSAVSRVH 741
>gi|311693682|gb|ADP96555.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [marine
bacterium HP15]
Length = 757
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 29/82 (35%), Gaps = 10/82 (12%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
D++I D G++ + +L ++ + ++ A + ++ S
Sbjct: 679 YPVDIEIEAY-------DRSGLLRDITQVLSASKSDVLSLNTLSNKDENTATMTVTVEIS 731
Query: 75 ILNSV---LEKLSVNVTIRFVK 93
L + L ++ I V+
Sbjct: 732 SLEQLARLLAQIRNLPNIIDVR 753
>gi|284162562|ref|YP_003401185.1| phosphoserine phosphatase SerB [Archaeoglobus profundus DSM 5631]
gi|284012559|gb|ADB58512.1| phosphoserine phosphatase SerB [Archaeoglobus profundus DSM 5631]
Length = 390
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+I ++ D +GIV + IL ++G+NI L + I + ++ + L
Sbjct: 91 YVITVLGNDRVGIVRDISKILLDHGVNIESTSLIARDKLISIEFVVDIGEADPEALKKSL 150
Query: 84 SVNVTIRFVKQFEFNV 99
V+ ++
Sbjct: 151 KK-----AVESINLDI 161
>gi|295691459|ref|YP_003595152.1| threonine dehydratase [Caulobacter segnis ATCC 21756]
gi|295433362|gb|ADG12534.1| threonine dehydratase [Caulobacter segnis ATCC 21756]
Length = 400
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGR-----SQSTEHAISFLCI-DGSILNSV 79
+ I+ D G++ V +++G G NI + R + D V
Sbjct: 327 LRIIGDDRPGLLSTVASVIGAMGANIIEVNHNRLALDVPAKGAEFDITIETRDAQHTQEV 386
Query: 80 LEKLSV 85
++ L
Sbjct: 387 MDALRE 392
>gi|209809627|ref|YP_002265166.1| transcriptional regulator, sigma-54 interaction protein
[Aliivibrio salmonicida LFI1238]
gi|208011190|emb|CAQ81618.1| transcriptional regulator, sigma-54 interaction protein
[Aliivibrio salmonicida LFI1238]
Length = 515
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + +S ++F +D + ++ K+ +
Sbjct: 8 KDRLGLTRELLDILASQSIDLRDIEI--DKSGLIYLNFPEVDFEEFSLLMAKIRRIDGVI 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|239917327|ref|YP_002956885.1| homoserine dehydrogenase [Micrococcus luteus NCTC 2665]
gi|281414193|ref|ZP_06245935.1| homoserine dehydrogenase [Micrococcus luteus NCTC 2665]
gi|239838534|gb|ACS30331.1| homoserine dehydrogenase [Micrococcus luteus NCTC 2665]
Length = 440
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-----NSV 79
M+ + AD G++ V + E+G++I S+ + + L + ++
Sbjct: 359 MVVLRAADQPGVLRRVAGVFEEHGVSIETLRQVPSEREDAPGASLRLITHRARQRDLDAT 418
Query: 80 LEKLSVNVTIRFV 92
+E L+ + V
Sbjct: 419 VEALAALDVVHEV 431
>gi|163855915|ref|YP_001630213.1| acetolactate synthase 3 regulatory subunit [Bordetella petrii DSM
12804]
gi|163259643|emb|CAP41944.1| acetolactate synthase small subunit [Bordetella petrii]
Length = 163
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+I ++ + G + V + G NI + ++ + +S L + + V+E++
Sbjct: 3 HVISVLMENEPGALSRVVGLFSARGYNIETLTVAPTE--DATLSRLTVVTVGSDEVIEQI 60
Query: 84 SVN 86
+ +
Sbjct: 61 TKH 63
>gi|160893036|ref|ZP_02073824.1| hypothetical protein CLOL250_00574 [Clostridium sp. L2-50]
gi|156865119|gb|EDO58550.1| hypothetical protein CLOL250_00574 [Clostridium sp. L2-50]
Length = 364
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ + D G + V +L + GIN+ +F + ++ E + L
Sbjct: 296 LFVDIPDEPGALAKVTVLLADAGINLKNFGISHNREDEEGVLRL 339
>gi|163802516|ref|ZP_02196408.1| formyltetrahydrofolate deformylase [Vibrio sp. AND4]
gi|159173599|gb|EDP58418.1| formyltetrahydrofolate deformylase [Vibrio sp. AND4]
Length = 277
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 26/60 (43%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + + +D G++ + NI ++ +NI H + ++ H ++G + L
Sbjct: 1 MEKKTLLTHCSDAPGLISKITNICYKHQLNIVHNNEFVDNTSGHFFMRTELEGYFNDQTL 60
>gi|14325225|dbj|BAB60670.1| Rel [Listeria monocytogenes]
Length = 738
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ N D++I + G++ + ++ NI + + +
Sbjct: 659 NDYNVDIEIYGY-------NRNGLLNDILQVINSLTSNINGVNAKVDNNKMATLVVTLQI 711
Query: 73 GSIL--NSVLEKLSVNVTIRFVKQF 95
+I V++K+ + V++
Sbjct: 712 HNINHLQRVVDKIKQIPDVYTVRRL 736
>gi|116754247|ref|YP_843365.1| prephenate dehydratase [Methanosaeta thermophila PT]
gi|116665698|gb|ABK14725.1| prephenate dehydratase [Methanosaeta thermophila PT]
Length = 272
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 23/71 (32%), Gaps = 9/71 (12%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHL--GRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
D G + + IN+ R + ++ F+ ++G + + + +
Sbjct: 194 KDRPGALFAILREFAVRNINLTRIESRPSRKELGDY-YFFIDLEGHVEDDAVRE--ALDG 250
Query: 89 IRF----VKQF 95
I V+
Sbjct: 251 IEKAANMVRVL 261
>gi|67921725|ref|ZP_00515242.1| Acetolactate synthase, small subunit [Crocosphaera watsonii WH
8501]
gi|67856317|gb|EAM51559.1| Acetolactate synthase, small subunit [Crocosphaera watsonii WH
8501]
Length = 173
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + D + + + +
Sbjct: 3 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQPGISRITMVVPGDDNSIEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V
Sbjct: 63 QLYKLINVLKVNDIT 77
>gi|16803563|ref|NP_465048.1| hypothetical protein lmo1523 [Listeria monocytogenes EGD-e]
gi|47097020|ref|ZP_00234593.1| GTP pyrophosphokinase [Listeria monocytogenes str. 1/2a F6854]
gi|224499816|ref|ZP_03668165.1| hypothetical protein LmonF1_09074 [Listeria monocytogenes Finland
1988]
gi|224501537|ref|ZP_03669844.1| hypothetical protein LmonFR_03302 [Listeria monocytogenes FSL
R2-561]
gi|254828243|ref|ZP_05232930.1| relA [Listeria monocytogenes FSL N3-165]
gi|254829718|ref|ZP_05234373.1| hypothetical protein Lmon1_00115 [Listeria monocytogenes 10403S]
gi|254898311|ref|ZP_05258235.1| hypothetical protein LmonJ_00810 [Listeria monocytogenes J0161]
gi|254912197|ref|ZP_05262209.1| GTP pyrophosphokinase [Listeria monocytogenes J2818]
gi|254936525|ref|ZP_05268222.1| relA [Listeria monocytogenes F6900]
gi|284801913|ref|YP_003413778.1| hypothetical protein LM5578_1668 [Listeria monocytogenes 08-5578]
gi|284995055|ref|YP_003416823.1| hypothetical protein LM5923_1620 [Listeria monocytogenes 08-5923]
gi|16410952|emb|CAC99601.1| relA [Listeria monocytogenes EGD-e]
gi|47014602|gb|EAL05562.1| GTP pyrophosphokinase [Listeria monocytogenes str. 1/2a F6854]
gi|258600631|gb|EEW13956.1| relA [Listeria monocytogenes FSL N3-165]
gi|258609119|gb|EEW21727.1| relA [Listeria monocytogenes F6900]
gi|284057475|gb|ADB68416.1| hypothetical protein LM5578_1668 [Listeria monocytogenes 08-5578]
gi|284060522|gb|ADB71461.1| hypothetical protein LM5923_1620 [Listeria monocytogenes 08-5923]
gi|293590170|gb|EFF98504.1| GTP pyrophosphokinase [Listeria monocytogenes J2818]
Length = 738
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ N D++I + G++ + ++ NI + + +
Sbjct: 659 NDYNVDIEIYGY-------NRNGLLNDILQVINSLTSNINGVNAKVDNNKMATLVVTLQI 711
Query: 73 GSIL--NSVLEKLSVNVTIRFVKQF 95
+I V++K+ + V++
Sbjct: 712 HNINHLQRVVDKIKQIPDVYTVRRL 736
>gi|269960589|ref|ZP_06174961.1| [Protein-PII] uridylyltransferase [Vibrio harveyi 1DA3]
gi|269834666|gb|EEZ88753.1| [Protein-PII] uridylyltransferase [Vibrio harveyi 1DA3]
Length = 874
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 6/76 (7%)
Query: 16 NFDVDI----GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL-- 69
D R ++ V D G++ VG + GIN+ + + L
Sbjct: 787 KVDFLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTS 846
Query: 70 CIDGSILNSVLEKLSV 85
G + ++L
Sbjct: 847 EAGGRLSEEQQDELRE 862
>gi|239996012|ref|ZP_04716536.1| GTP pyrophosphokinase [Alteromonas macleodii ATCC 27126]
Length = 727
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKLSVNV 87
D G++ + +L + + + ++ + A+ + I D ++ VL +L
Sbjct: 658 HDRTGLLRDITTVLANENVPLLGVNSLSDKNRQTALITISIEVHDLDTVSKVLTRLRQLK 717
Query: 88 TIRFVK 93
+ K
Sbjct: 718 GVTDAK 723
>gi|226939518|ref|YP_002794591.1| homoserine dehydrogenase [Laribacter hongkongensis HLHK9]
gi|226714444|gb|ACO73582.1| MetL [Laribacter hongkongensis HLHK9]
Length = 436
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 18/62 (29%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D G++ + IL + I+I S H L + +
Sbjct: 362 DRPGVLADITRILADEQISIEALIQKGSDQGSHTEIVLLTHRVQEKHANSAIRRIEALDS 421
Query: 92 VK 93
VK
Sbjct: 422 VK 423
>gi|281420789|ref|ZP_06251788.1| acetolactate synthase, small subunit [Prevotella copri DSM 18205]
gi|281405081|gb|EFB35761.1| acetolactate synthase, small subunit [Prevotella copri DSM 18205]
Length = 181
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 7/70 (10%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ + + +I GI+ + + +NI ++ S + + D + + +
Sbjct: 10 YTLLVYSENIAGILNQITAVFTRRQVNIESLNVSASSIKNIHKYTITVWSDEEQIEKINK 69
Query: 82 KLSVNVTIRF 91
+ + +
Sbjct: 70 AIEKKIDVVK 79
>gi|146305653|ref|YP_001186118.1| phosphoserine phosphatase [Pseudomonas mendocina ymp]
gi|145573854|gb|ABP83386.1| phosphoserine phosphatase [Pseudomonas mendocina ymp]
Length = 429
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKL 83
+I I D G+ + +L + G+NI T + I D +VL+ L
Sbjct: 31 LINITGEDRPGLTAAITGVLAQGGVNILDIGQAVIHDTLSFGILIEIPDNGRSQAVLKDL 90
>gi|116251272|ref|YP_767110.1| stringent response protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115255920|emb|CAK07001.1| putative stringent response protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 744
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEK 82
I + + G + V + +NI + R + + + + D LN +L +
Sbjct: 670 RIMVNGLNEPGTLAKVAQTVAGLDVNIRLLNTVRVAADFTEMMLEVEVWDLRQLNQLLAQ 729
Query: 83 LSVNVTIRFVKQF 95
+ I V++
Sbjct: 730 MKELDCIATVRRL 742
>gi|83589378|ref|YP_429387.1| ACT domain-containing protein [Moorella thermoacetica ATCC 39073]
gi|83572292|gb|ABC18844.1| ACT domain protein [Moorella thermoacetica ATCC 39073]
Length = 143
Score = 34.2 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 9/71 (12%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ + D G + + +IL E GINI + + + A+ + E+L
Sbjct: 72 LGVEMPDRPGGLSNILSILEENGINIEYLYAFIGRGDNGALVIFRV---------EELDA 122
Query: 86 NVTIRFVKQFE 96
+ + +
Sbjct: 123 AIDVLQARGIT 133
>gi|313202628|ref|YP_004041285.1| acetolactate synthase, small subunit [Paludibacter
propionicigenes WB4]
gi|312441944|gb|ADQ78300.1| acetolactate synthase, small subunit [Paludibacter
propionicigenes WB4]
Length = 182
Score = 34.2 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I I + + +G++ + I INI + S + + I++ V++
Sbjct: 6 YTITIFSENTVGLLGQITIIFTRRSINIETLSVSPSAIKGIHKFTITLFATEDIVSKVVK 65
Query: 82 KLSVNVTIRFV 92
++ + I
Sbjct: 66 QIDKRIDILKA 76
>gi|304316999|ref|YP_003852144.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778501|gb|ADL69060.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 718
Score = 34.2 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID---GSILNSVLEKLS 84
I+ D G++ V +IL + I++ + R+ AI L ++ L ++ KL
Sbjct: 647 IMANDRYGLLTDVTSILADIKISVRAVN-ARTTKDNVAIINLTLEITSRDQLEKIMNKLK 705
Query: 85 VNVTIRFV 92
+ V
Sbjct: 706 ALDGVTDV 713
>gi|237746845|ref|ZP_04577325.1| GTP pyrophosphokinase [Oxalobacter formigenes HOxBLS]
gi|229378196|gb|EEO28287.1| GTP pyrophosphokinase [Oxalobacter formigenes HOxBLS]
Length = 754
Score = 34.2 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 8/80 (10%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL-GRSQSTEHAISFLCIDG 73
D+D ++ D G++ + ++ IN+ H + + +
Sbjct: 680 YPVDID-------VLAGDRQGLLRDISDVFMREKINVIGVHTQSNKGQARMSFTVEIVST 732
Query: 74 SILNSVLEKLSVNVTIRFVK 93
LN ++ + + VK
Sbjct: 733 ESLNKAMQMIREVGGVTQVK 752
>gi|254466834|ref|ZP_05080245.1| homoserine dehydrogenase [Rhodobacterales bacterium Y4I]
gi|206687742|gb|EDZ48224.1| homoserine dehydrogenase [Rhodobacterales bacterium Y4I]
Length = 428
Score = 34.2 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLEKLSVNVTI 89
D G + V ILGE G++I + + +IL++ L+ LS +
Sbjct: 357 DKPGALAKVAAILGEAGVSIDRMRQYGHSEPVAPVLIVTHKCTRAILDAALDGLSATDVV 416
>gi|254431569|ref|ZP_05045272.1| acetolactate synthase, small subunit [Cyanobium sp. PCC 7001]
gi|197626022|gb|EDY38581.1| acetolactate synthase, small subunit [Cyanobium sp. PCC 7001]
Length = 176
Score = 34.2 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ ++ D G + + + G NI +G ++ + + ++G + L ++
Sbjct: 3 HTLSVLVEDESGALSRISGLFARRGFNIESLAVGPAEREGMSRLTMVVEG--DDRTLAQM 60
Query: 84 -SVNVTIRFV 92
+ V
Sbjct: 61 TKQLDKLINV 70
>gi|270307456|ref|YP_003329514.1| relA/spoT protein, GTP pyrophosphokinase [Dehalococcoides sp. VS]
gi|270153348|gb|ACZ61186.1| relA/spoT protein, GTP pyrophosphokinase [Dehalococcoides sp. VS]
Length = 728
Score = 34.2 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKLSV 85
I D +G+V V ++ E I+I + + +S S+ ++ KL
Sbjct: 651 IQAWDRVGLVRDVSTVVAEEKISILSMTVTENDDKTTTLSMTAQIKSLSQLTRLMAKLEG 710
Query: 86 NVTIRFVKQF 95
I + +
Sbjct: 711 IRGIISINRV 720
>gi|328474369|gb|EGF45174.1| PII uridylyl-transferase [Vibrio parahaemolyticus 10329]
Length = 874
Score = 34.2 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 21/76 (27%), Gaps = 6/76 (7%)
Query: 16 NFDVDI---GRLMIC-IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL-- 69
D + + V D G++ VG + IN+ + + L
Sbjct: 787 KVDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTS 846
Query: 70 CIDGSILNSVLEKLSV 85
G + +L
Sbjct: 847 EAGGRLSEEQQNELRD 862
>gi|289706373|ref|ZP_06502731.1| homoserine dehydrogenase [Micrococcus luteus SK58]
gi|289556868|gb|EFD50201.1| homoserine dehydrogenase [Micrococcus luteus SK58]
Length = 440
Score = 34.2 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-----NSV 79
M+ + AD G++ V + E+G++I S+ + + L + ++
Sbjct: 359 MVVLRAADQPGVLRRVAGVFEEHGVSIETLRQVPSEREDAPGASLRLITHRARQRDLDAT 418
Query: 80 LEKLSVNVTIRFV 92
+E L+ + V
Sbjct: 419 VEALAALDVVHEV 431
>gi|253576428|ref|ZP_04853758.1| prephenate dehydrogenase [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251844321|gb|EES72339.1| prephenate dehydrogenase [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 364
Score = 34.2 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 14/86 (16%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL--GRSQSTEHAI 66
+ +I DV D GI+ + LG IN+++ + R
Sbjct: 291 ITSLFDIYIDVP-----------DTPGIIGQIATELGLRHINLSNMQIIESREDVPGVLR 339
Query: 67 SFLCIDGSILNSVLEKLSVNVTIRFV 92
+G + L + +V
Sbjct: 340 LSFRQEGEM-ERAKAHLQSLGYVVYV 364
>gi|147677956|ref|YP_001212171.1| prephenate dehydrogenase [Pelotomaculum thermopropionicum SI]
gi|146274053|dbj|BAF59802.1| prephenate dehydrogenase [Pelotomaculum thermopropionicum SI]
Length = 367
Score = 34.2 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 14/38 (36%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTE 63
I D G + + L GINI + R + E
Sbjct: 299 IVAAIPDQPGALARLTAHLAGAGINITDIEILRVREGE 336
>gi|227550126|ref|ZP_03980175.1| ACT domain-containing protein [Enterococcus faecium TX1330]
gi|257886009|ref|ZP_05665662.1| ACT domain-containing protein [Enterococcus faecium 1,231,501]
gi|257889075|ref|ZP_05668728.1| ACT domain-containing protein [Enterococcus faecium 1,141,733]
gi|257900160|ref|ZP_05679813.1| ACT domain-containing protein [Enterococcus faecium Com15]
gi|293570191|ref|ZP_06681262.1| ACT-domain containing protein [Enterococcus faecium E980]
gi|227180740|gb|EEI61712.1| ACT domain-containing protein [Enterococcus faecium TX1330]
gi|257821865|gb|EEV48995.1| ACT domain-containing protein [Enterococcus faecium 1,231,501]
gi|257825147|gb|EEV52061.1| ACT domain-containing protein [Enterococcus faecium 1,141,733]
gi|257838072|gb|EEV63146.1| ACT domain-containing protein [Enterococcus faecium Com15]
gi|291609724|gb|EFF38983.1| ACT-domain containing protein [Enterococcus faecium E980]
Length = 88
Score = 34.2 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE-KL 83
++ +V D +GI+ V L E INI + + L + ++ L
Sbjct: 4 ILTVVGKDKVGIIAGVSQKLAELNINILDVSQTIMEDYFTMMMMLQMQPEADLEAIKQAL 63
Query: 84 SVNVTIRFVK 93
S VK
Sbjct: 64 SQVENTLGVK 73
>gi|218246000|ref|YP_002371371.1| aspartate kinase [Cyanothece sp. PCC 8801]
gi|218166478|gb|ACK65215.1| aspartate kinase [Cyanothece sp. PCC 8801]
Length = 599
Score = 34.2 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 8/81 (9%)
Query: 12 IQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS-------TEH 64
++ + D ++ + V D G+ + +L ++ I+I + +
Sbjct: 436 VRGVALDEKQAQIALIHVQ-DRPGMAASIFGVLADHNISIDTIIQSQRCRIVEGIPTRDI 494
Query: 65 AISFLCIDGSILNSVLEKLSV 85
A + ID + L+ L+
Sbjct: 495 AFTVAQIDVESAQNALKTLAS 515
>gi|156839477|ref|XP_001643429.1| hypothetical protein Kpol_487p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156114039|gb|EDO15571.1| hypothetical protein Kpol_487p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 301
Score = 34.2 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 8/71 (11%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLE 81
++ + + G++ + L G NI + ++ + + + + G ++
Sbjct: 71 HVLNCLVQNEPGVLSRISGTLAARGFNIDSLVVCNTEVKDLSRMTIVLQGQDGVIEQARR 130
Query: 82 KLSVNVTIRFV 92
++ V + V
Sbjct: 131 QIEDLVPVYAV 141
>gi|126735918|ref|ZP_01751662.1| acetolactate synthase, small subunit [Roseobacter sp. CCS2]
gi|126714475|gb|EBA11342.1| acetolactate synthase, small subunit [Roseobacter sp. CCS2]
Length = 188
Score = 34.2 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 23/75 (30%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + ++ + G++ V + G NI + H + +++
Sbjct: 27 ERHTLAVLVENEPGVLSRVIGLFAGRGYNIDSLTVAEVDHLGHRSRITIVTSGTPQIIVQ 86
Query: 82 KLSVNVTIRFVKQFE 96
+ I V +
Sbjct: 87 IKAQLGRIVDVHKVN 101
>gi|117923492|ref|YP_864109.1| chorismate mutase / prephenate dehydratase [Magnetococcus sp. MC-1]
gi|117607248|gb|ABK42703.1| chorismate mutase [Magnetococcus sp. MC-1]
Length = 368
Score = 34.2 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 28/79 (35%), Gaps = 6/79 (7%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLG-RSQSTEHAISFLCIDGSILNS-- 78
+ I + D G + + + E GIN++ + + F+ ++G +
Sbjct: 283 DKTSIMVSFLDDPGFLHRILGVFAERGINLSRIESRPTQERAWDYLFFIDMEGHRQDEGV 342
Query: 79 --VLEKLSVNVTIRFVKQF 95
LE L + VK
Sbjct: 343 SAALEALGALSGV-SVKIL 360
>gi|297195221|ref|ZP_06912619.1| prephenate dehydrogenase [Streptomyces pristinaespiralis ATCC
25486]
gi|297152704|gb|EFH31945.1| prephenate dehydrogenase [Streptomyces pristinaespiralis ATCC
25486]
Length = 249
Score = 34.2 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 28/76 (36%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+++ + ++ ++ +D G + + G G+NI + + + + L
Sbjct: 167 VRVPGKHGTAPAAYEVVAVLISDQPGELARIFADTGRAGVNIEDVRIEHATGQQAGLVQL 226
Query: 70 CIDGSILNSVLEKLSV 85
++ + + L
Sbjct: 227 MVEPTAAPLLSAALRE 242
>gi|300914191|ref|ZP_07131507.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X561]
gi|307724574|ref|YP_003904325.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter sp. X513]
gi|300889126|gb|EFK84272.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X561]
gi|307581635|gb|ADN55034.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X513]
Length = 719
Score = 34.2 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID---GSILNSVLEKLS 84
I+ D G++ V ++L + I + + R+ AI L ++ L V+ KL
Sbjct: 648 IMANDRFGLLTEVTSVLADVKIAVKAVN-ARTTKDNIAIINLTLEIISKEQLEKVMNKLK 706
Query: 85 VNVTIRFV 92
+ V
Sbjct: 707 ALEGVMDV 714
>gi|170288591|ref|YP_001738829.1| prephenate dehydratase [Thermotoga sp. RQ2]
gi|170176094|gb|ACB09146.1| Prephenate dehydratase [Thermotoga sp. RQ2]
Length = 552
Score = 34.2 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 23/76 (30%), Gaps = 3/76 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL--GRSQSTEHAISFLCIDGSIL 76
++ + D G + V +I GIN+ R+ ++ ++ +
Sbjct: 464 MEGKYTSLFFGVQDRPGSLKAVLDIFASRGINLRKLESRPARTFLGDYVFFV-EVEAPLK 522
Query: 77 NSVLEKLSVNVTIRFV 92
+ L +
Sbjct: 523 EEDIRDLEKVTAFYKI 538
>gi|157413695|ref|YP_001484561.1| acetolactate synthase 3 regulatory subunit [Prochlorococcus
marinus str. MIT 9215]
gi|157388270|gb|ABV50975.1| Acetolactate synthase small subunit [Prochlorococcus marinus str.
MIT 9215]
Length = 174
Score = 34.2 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G ++S + + D L + +
Sbjct: 3 HTLSVLVEDESGALSRISGLFARRGFNIDSLAVGPAESKGISRLTMVVEGDDETLQQMTK 62
Query: 82 KLSVNVTIRFV 92
+L+ + V
Sbjct: 63 QLNKLFNVLGV 73
>gi|28899094|ref|NP_798699.1| PII uridylyl-transferase [Vibrio parahaemolyticus RIMD 2210633]
gi|260361365|ref|ZP_05774430.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus K5030]
gi|260876824|ref|ZP_05889179.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AN-5034]
gi|260895882|ref|ZP_05904378.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus Peru-466]
gi|260900384|ref|ZP_05908779.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AQ4037]
gi|32363168|sp|Q87MD6|GLND_VIBPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|28807318|dbj|BAC60583.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus RIMD
2210633]
gi|308089359|gb|EFO39054.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus Peru-466]
gi|308091507|gb|EFO41202.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AN-5034]
gi|308108580|gb|EFO46120.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AQ4037]
gi|308113668|gb|EFO51208.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus K5030]
Length = 874
Score = 34.2 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 21/76 (27%), Gaps = 6/76 (7%)
Query: 16 NFDVDI---GRLMIC-IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL-- 69
D + + V D G++ VG + IN+ + + L
Sbjct: 787 KVDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTS 846
Query: 70 CIDGSILNSVLEKLSV 85
G + +L
Sbjct: 847 EAGGRLSEEQQNELRD 862
>gi|325110040|ref|YP_004271108.1| acetolactate synthase, small subunit [Planctomyces brasiliensis
DSM 5305]
gi|324970308|gb|ADY61086.1| acetolactate synthase, small subunit [Planctomyces brasiliensis
DSM 5305]
Length = 178
Score = 34.2 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ + + G++ + +L NI +G + E + + D +L+ V +
Sbjct: 3 HVLSALVMNQPGVLAHISGMLASRAFNIESLAVGETDIPEFSRMTFVVAGDDRVLDQVRK 62
Query: 82 KLSVNVTIRFV 92
+L VT+ V
Sbjct: 63 QLEKIVTVVQV 73
>gi|256828567|ref|YP_003157295.1| CBS domain containing protein [Desulfomicrobium baculatum DSM 4028]
gi|256577743|gb|ACU88879.1| CBS domain containing protein [Desulfomicrobium baculatum DSM 4028]
Length = 217
Score = 34.2 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
+++G I I D G++ + + + G+NI + +
Sbjct: 134 EMGLELGGNRIVIEAEDRKGLMAEISRLFFDLGVNI--LSTSTFFRGNQRLLVFRVRTDD 191
Query: 76 LNSV 79
+
Sbjct: 192 SEGL 195
>gi|206586438|gb|ACI15750.1| ZntA [Comamonas testosteroni S44]
Length = 977
Score = 34.2 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 8/95 (8%)
Query: 8 RFIKIQEI-NFDVDIGRLMI-CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R I I D ++ + + + + L + G+ + G + A
Sbjct: 213 RLGAINGIERLDFNLMGRRLDVLHHLPDP---APILKALNDVGMKASIERSGDTAPQGQA 269
Query: 66 ISFLC-IDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
I + +D +L K + VK FN+
Sbjct: 270 IYLIEKMDCPTEEGLLRK--ALEGMPGVKALNFNL 302
>gi|134299119|ref|YP_001112615.1| signal-transduction protein [Desulfotomaculum reducens MI-1]
gi|134051819|gb|ABO49790.1| putative signal-transduction protein with CBS domains
[Desulfotomaculum reducens MI-1]
Length = 210
Score = 34.2 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D +G + + +I+ + I+I+ + R + + ++ ++++L
Sbjct: 141 TRLVLQVYDRVGAIADLTDIIRDMNISISGIVIHRRDN-NLVHMVVRVNTIEPEPLVKEL 199
Query: 84 SV 85
Sbjct: 200 EA 201
>gi|308050288|ref|YP_003913854.1| TyrR family transcriptional regulator [Ferrimonas balearica DSM
9799]
gi|307632478|gb|ADN76780.1| transcriptional regulator, TyrR [Ferrimonas balearica DSM 9799]
Length = 514
Score = 34.2 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 22/70 (31%), Gaps = 8/70 (11%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNV 87
D +G+ + +L + INI + FL I + + +
Sbjct: 8 EDRIGLAREILEVLEKQNININAI-----DAGSAGYVFLQIPAPSFEELQILMPMIRKIP 62
Query: 88 TIRFVKQFEF 97
+ VK F
Sbjct: 63 GVTDVKTVPF 72
>gi|284048851|ref|YP_003399190.1| (p)ppGpp synthetase I, SpoT/RelA [Acidaminococcus fermentans DSM
20731]
gi|283953072|gb|ADB47875.1| (p)ppGpp synthetase I, SpoT/RelA [Acidaminococcus fermentans DSM
20731]
Length = 740
Score = 34.2 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEK 82
+ + D G++ + + E +NI + + + A + +D S L+ ++ +
Sbjct: 665 LRLTAVDQPGVMANIMTVASETKVNINSIN-AHTNPNKTAFIDMGLDISSLDQLNYIIGR 723
Query: 83 LSVNVTIRFV 92
L + V
Sbjct: 724 LRRIKGVYKV 733
>gi|189425559|ref|YP_001952736.1| acetolactate synthase 3 regulatory subunit [Geobacter lovleyi SZ]
gi|189421818|gb|ACD96216.1| acetolactate synthase, small subunit [Geobacter lovleyi SZ]
Length = 163
Score = 34.2 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I +V + G++ V + G NI + + + + D ++L + +
Sbjct: 3 HTISVVVENEFGVLARVSGLFSGRGFNIDSLTVAPTSDESLSRITIVTRGDDAVLEQITK 62
Query: 82 KLSVNVTIRFV 92
+L+ V + V
Sbjct: 63 QLNKLVDVIKV 73
>gi|158335218|ref|YP_001516390.1| homoserine dehydrogenase [Acaryochloris marina MBIC11017]
gi|158305459|gb|ABW27076.1| homoserine dehydrogenase [Acaryochloris marina MBIC11017]
Length = 440
Score = 34.2 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 7/66 (10%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVN 86
D G++ +G + G +G+++ + ++ + + + L+++
Sbjct: 370 KDHPGVIGKLGTVFGNHGVSLES--VVQTGIKAELAEIVVVTHDVQEGNFHQALDEIRQM 427
Query: 87 VTIRFV 92
I +
Sbjct: 428 EAISSI 433
>gi|11498625|ref|NP_069853.1| hypothetical protein AF1020 [Archaeoglobus fulgidus DSM 4304]
gi|2649579|gb|AAB90227.1| predicted coding region AF_1020 [Archaeoglobus fulgidus DSM 4304]
Length = 165
Score = 34.2 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 25/58 (43%)
Query: 35 GIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
GIV V + L GI+I + + + + + + I +V+E++ + V
Sbjct: 105 GIVAGVASALANAGISIRYILAEDPELSVESKLTVVTETKIPGAVVEEILRVEGVEKV 162
>gi|16800626|ref|NP_470894.1| hypothetical protein lin1558 [Listeria innocua Clip11262]
gi|16414045|emb|CAC96789.1| relA [Listeria innocua Clip11262]
gi|313618809|gb|EFR90701.1| GTP diphosphokinase [Listeria innocua FSL S4-378]
Length = 738
Score = 34.2 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ N D++I + G++ + ++ NI + + +
Sbjct: 659 NDYNVDIEIYGY-------NRNGLLNDILQVINSLTSNINGVNAKVDNNKMATLVVTLQI 711
Query: 73 GSIL--NSVLEKLSVNVTIRFVKQF 95
+I V++K+ + V++
Sbjct: 712 HNINHLQRVVDKIKQIPDVYTVRRL 736
>gi|319892384|ref|YP_004149259.1| Prephenate dehydrogenase [Staphylococcus pseudintermedius HKU10-03]
gi|317162080|gb|ADV05623.1| Prephenate dehydrogenase [Staphylococcus pseudintermedius HKU10-03]
Length = 378
Score = 34.2 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHL 56
+ + D G++ V IL ++ I+I + +
Sbjct: 312 LYVDIPDKPGMISKVTEILSQHQISIRNLRI 342
>gi|218262196|ref|ZP_03476744.1| hypothetical protein PRABACTJOHN_02418 [Parabacteroides johnsonii
DSM 18315]
gi|218223527|gb|EEC96177.1| hypothetical protein PRABACTJOHN_02418 [Parabacteroides johnsonii
DSM 18315]
Length = 187
Score = 34.2 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ I + + +G++ + I +NI + S + D +++ V++
Sbjct: 7 YTVIIFSENTVGLLNQITIIFTRRQLNIETLSVSPSAIQGIHKFTITTFADEDMIDKVVK 66
Query: 82 KLSVNVTIRFV 92
++ V I
Sbjct: 67 QIDKRVDILKA 77
>gi|218782928|ref|YP_002434246.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfatibacillum alkenivorans
AK-01]
gi|218764312|gb|ACL06778.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfatibacillum alkenivorans
AK-01]
Length = 713
Score = 34.2 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
+ + D +G++ + + + NI + LG Q + L+ V+
Sbjct: 639 RLYVRANDRVGLLADITAAVSQCDANITSINTRLGEDQQANVYLVVQVAGKDRLDVVIAS 698
Query: 83 LSVNVTIRFVK 93
+ ++ VK
Sbjct: 699 IRKVNSVTLVK 709
>gi|163782986|ref|ZP_02177981.1| (p)ppGpp 3-pyrophosphohydrolase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881666|gb|EDP75175.1| (p)ppGpp 3-pyrophosphohydrolase [Hydrogenivirga sp. 128-5-R1-1]
Length = 702
Score = 34.2 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 7/81 (8%)
Query: 15 INFDVDIGR---LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI 71
+ I I D +GI+ + + E G NI R+ A I
Sbjct: 615 FRVKLKPEGKFKTKIRIKARDRIGILSEIAKNIAESGSNIWE-STTRTTGDGTAFMDFTI 673
Query: 72 DGSILN---SVLEKLSVNVTI 89
D + V++ + +
Sbjct: 674 DVTNKKHLRDVMKSIKSVEGV 694
>gi|18976663|ref|NP_578020.1| prephenate dehydratase [Pyrococcus furiosus DSM 3638]
gi|18892238|gb|AAL80415.1| prephenate dehydratase [Pyrococcus furiosus DSM 3638]
Length = 266
Score = 34.2 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 9/96 (9%)
Query: 4 DGKPRFIKIQEINFDVDIGRLM-----ICIVNADILGIVVFVGNILGEYGINIAHFHLGR 58
+ K RFI I + + +G I + ++ G + + + G+N+ R
Sbjct: 164 NNKTRFILIGREDMENPLGDKTPQKGAIFLELENVPGALYRALGVFAKRGVNLTRIE-SR 222
Query: 59 SQSTEHAISFLCIDGSIL---NSVLEKLSVNVTIRF 91
+ ID + +LE+L
Sbjct: 223 PSLKDLGYYIFYIDYEYTQEEDEILEELKQVSKFLK 258
>gi|23014395|ref|ZP_00054214.1| COG0317: Guanosine polyphosphate pyrophosphohydrolases/synthetases
[Magnetospirillum magnetotacticum MS-1]
Length = 723
Score = 34.2 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEKLSVNVTI 89
+ G + ++ + NI + + + + + + D L +V+ L I
Sbjct: 656 NEPGAFGAISTVIAKNMGNITNLKITNRTTDFFEMLIDIEVRDVKHLTNVIAALRATPVI 715
Query: 90 RFV 92
V
Sbjct: 716 NSV 718
>gi|313623673|gb|EFR93827.1| GTP diphosphokinase [Listeria innocua FSL J1-023]
Length = 738
Score = 34.2 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ N D++I + G++ + ++ NI + + +
Sbjct: 659 NDYNVDIEIYGY-------NRNGLLNDILQVINSLTSNINGVNAKVDNNKMATLVVTLQI 711
Query: 73 GSIL--NSVLEKLSVNVTIRFVKQF 95
+I V++K+ + V++
Sbjct: 712 HNINHLQRVVDKIKQIPDVYTVRRL 736
>gi|237748620|ref|ZP_04579100.1| homoserine dehydrogenase [Oxalobacter formigenes OXCC13]
gi|229379982|gb|EEO30073.1| homoserine dehydrogenase [Oxalobacter formigenes OXCC13]
Length = 436
Score = 34.2 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 5/73 (6%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI----DGSILNSVLEKLSVN 86
D G++ + IL + I+I F Q E + + + +++ +EK+
Sbjct: 361 KDQPGVLAEITRILADLNISIDAFLQKEPQEGETLVDIIILTHLTQEKNMDAAIEKVENL 420
Query: 87 VTIR-FVKQFEFN 98
T+ V +
Sbjct: 421 STVMGKVTKIRLE 433
>gi|116872952|ref|YP_849733.1| GTP pyrophosphokinase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741830|emb|CAK20954.1| GTP pyrophosphokinase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 738
Score = 34.2 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ N D++I + G++ + ++ NI + + +
Sbjct: 659 NDYNVDIEIYGY-------NRNGLLNDILQVINSLTSNINGVNAKVDNNKMATLVVTLQI 711
Query: 73 GSIL--NSVLEKLSVNVTIRFVKQF 95
+I V++K+ + V++
Sbjct: 712 HNINHLQRVVDKIKQIPDVYTVRRL 736
>gi|167648890|ref|YP_001686553.1| threonine dehydratase [Caulobacter sp. K31]
gi|167351320|gb|ABZ74055.1| threonine dehydratase [Caulobacter sp. K31]
Length = 403
Score = 34.2 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGR-----SQSTEHAISFLCI-DGSILNSV 79
+ IV D G++ V N++G G NI + R + D V
Sbjct: 330 LRIVGDDRPGLLSTVANVIGTAGANIIEVNHNRLALDVPAKGAEFDITIETRDAQHTQEV 389
Query: 80 LEKLSV 85
++ L
Sbjct: 390 MDALRE 395
>gi|73662425|ref|YP_301206.1| hypothetical protein SSP1116 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|90185100|sp|Q49Y81|Y1116_STAS1 RecName: Full=UPF0735 ACT domain-containing protein SSP1116
gi|72494940|dbj|BAE18261.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 151
Score = 34.2 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 5/81 (6%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF----LCIDGSILNS 78
+ + DI+G++ V N L ++I H I+ D I +
Sbjct: 72 EFTLILYVNDIVGMLAEVLNTLSNLDLSILTIHQSIPMEGRATITLSLDATSTDLEI-DD 130
Query: 79 VLEKLSVNVTIRFVKQFEFNV 99
V+E L + + V+ +
Sbjct: 131 VMEALRIVDHVSKVELISMTI 151
>gi|322374948|ref|ZP_08049462.1| acetolactate synthase, small subunit [Streptococcus sp. C300]
gi|321280448|gb|EFX57487.1| acetolactate synthase, small subunit [Streptococcus sp. C300]
Length = 155
Score = 34.2 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G +++ + + ID + + V + +
Sbjct: 1 MLTARLQNRSGVLNRFTGVLSRRQVNIESISVGATENPNVSRITIIIDVASHDEVEQIIK 60
Query: 85 VNV---TIRFVKQFE 96
+ ++
Sbjct: 61 QLNRQIDVIRIRDIT 75
>gi|83951934|ref|ZP_00960666.1| acetolactate synthase small subunit [Roseovarius nubinhibens ISM]
gi|83836940|gb|EAP76237.1| acetolactate synthase small subunit [Roseovarius nubinhibens ISM]
Length = 185
Score = 34.2 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ ++ + G++ V + G NI + T H S + I ++E
Sbjct: 27 ESHTLAVLVDNEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGHT-SRITIVTKGTPQIIE 85
Query: 82 KLSV-NVTIRFVKQFE 96
++ I V
Sbjct: 86 QIKAQLGRIVPVHAVH 101
>gi|312875818|ref|ZP_07735808.1| amino acid-binding ACT domain protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|311797299|gb|EFR13638.1| amino acid-binding ACT domain protein [Caldicellulosiruptor
lactoaceticus 6A]
Length = 143
Score = 34.2 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 5/73 (6%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+I I D G + V IL I I + + + ++ A+ L ++
Sbjct: 62 NGFTVSAT---DVIAIAVEDKPGGLAKVLEILYRKDIGIEYMYAFVGKLSDQALVILKVE 118
Query: 73 GSILNSVLEKLSV 85
+ + +E L
Sbjct: 119 KA--DEAIEVLKE 129
>gi|288556104|ref|YP_003428039.1| prephenate dehydrogenase [Bacillus pseudofirmus OF4]
gi|288547264|gb|ADC51147.1| prephenate dehydrogenase [Bacillus pseudofirmus OF4]
Length = 365
Score = 34.2 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL--GRSQSTEHAISFLCIDGSIL 76
+ + D G++ V IL ++ I+I + + R + +
Sbjct: 290 AIPSFYDLYVDIPDHPGVISDVTGILAQHKISITNIRILETREDIMGVLRLTFRSEDDLE 349
Query: 77 NS 78
+
Sbjct: 350 EA 351
>gi|227832955|ref|YP_002834662.1| acetolactate synthase small subunit [Corynebacterium aurimucosum
ATCC 700975]
gi|262182558|ref|ZP_06041979.1| acetolactate synthase 3 regulatory subunit [Corynebacterium
aurimucosum ATCC 700975]
gi|227453971|gb|ACP32724.1| acetolactate synthase small subunit [Corynebacterium aurimucosum
ATCC 700975]
Length = 171
Score = 34.2 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID--GSILNSVLE 81
++ + DI GI+ V + G N+ R+++ + +D ++ V +
Sbjct: 9 HILSVRVQDIEGIISRVTGMFTRRGYNLISLVSARTETEGINRLTIVVDASEVVIEQVTK 68
Query: 82 KLSVNVTIRFVKQFE 96
+L+ V + V + E
Sbjct: 69 QLNKIVPVLKVVELE 83
>gi|90420858|ref|ZP_01228763.1| GTP pyrophosphokinase, Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Aurantimonas manganoxydans
SI85-9A1]
gi|90334833|gb|EAS48605.1| GTP pyrophosphokinase, Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Aurantimonas manganoxydans
SI85-9A1]
Length = 738
Score = 34.2 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 4/75 (5%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLE 81
I I + G + + + NI + + + + L + D L L
Sbjct: 664 RIMISAINEPGSLAEIAETVAANDANIHNLTMVNTAP-DFTKMVLELEVWDIQHLTQTLR 722
Query: 82 KLSVNVTIRFVKQFE 96
+L + V +
Sbjct: 723 QLRAKPCVSEVVRVN 737
>gi|15606863|ref|NP_214243.1| homoserine dehydrogenase [Aquifex aeolicus VF5]
gi|2984093|gb|AAC07631.1| homoserine dehydrogenase [Aquifex aeolicus VF5]
Length = 435
Score = 34.2 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 20/62 (32%), Gaps = 7/62 (11%)
Query: 32 DILGIVVFVGNILGEYGINIAH-----FHLGRSQSTEHAIS--FLCIDGSILNSVLEKLS 84
D G++ + N+L +Y I+IA + I + + + L
Sbjct: 354 DKPGVLAKIANVLADYNISIASVLQKEMVCKIAGREGETIVPLVILTHKAFEEDIQNALK 413
Query: 85 VN 86
Sbjct: 414 EI 415
>gi|315282436|ref|ZP_07870851.1| GTP diphosphokinase [Listeria marthii FSL S4-120]
gi|313613919|gb|EFR87648.1| GTP diphosphokinase [Listeria marthii FSL S4-120]
Length = 738
Score = 34.2 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ N D++I + G++ + ++ NI + + +
Sbjct: 659 NDYNVDIEIYGY-------NRNGLLNDILQVINSLTSNINGVNAKVDNNKMATLVVTLQI 711
Query: 73 GSIL--NSVLEKLSVNVTIRFVKQF 95
+I V++K+ + V++
Sbjct: 712 HNINHLQRVVDKIKQIPDVYTVRRL 736
>gi|52079809|ref|YP_078600.1| formyltetrahydrofolate deformylase [Bacillus licheniformis ATCC
14580]
gi|52785179|ref|YP_091008.1| formyltetrahydrofolate deformylase [Bacillus licheniformis ATCC
14580]
gi|319646381|ref|ZP_08000611.1| YkkE protein [Bacillus sp. BT1B_CT2]
gi|52003020|gb|AAU22962.1| Formyltetrahydrofolate deformylase [Bacillus licheniformis ATCC
14580]
gi|52347681|gb|AAU40315.1| YkkE [Bacillus licheniformis ATCC 14580]
gi|317392131|gb|EFV72928.1| YkkE protein [Bacillus sp. BT1B_CT2]
Length = 300
Score = 34.2 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGIN-IAHFHLGRSQSTEHAISFLCIDGSIL 76
+++ + + + D GIV V + L E G N I + + +
Sbjct: 14 EINNDKARLLVSCPDQPGIVAAVSSFLFENGANIIESNQYTTDPEGGRFFLRIEFEVQGI 73
Query: 77 NSVLEKLSV 85
+E++
Sbjct: 74 REKIEQMKA 82
>gi|239905843|ref|YP_002952582.1| formyltetrahydrofolate deformylase [Desulfovibrio magneticus
RS-1]
gi|239795707|dbj|BAH74696.1| formyltetrahydrofolate deformylase [Desulfovibrio magneticus
RS-1]
Length = 285
Score = 34.2 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 14/55 (25%), Gaps = 1/55 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
D GIV V L +G NI L ++ L
Sbjct: 13 DRPGIVSAVTTFLYTHGANIIDLDQHSTDPEGGTFFMRLEFYTPYIDVSRAALEA 67
>gi|307155133|ref|YP_003890517.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7822]
gi|306985361|gb|ADN17242.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7822]
Length = 750
Score = 34.2 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEK 82
I I D +G++ + + L + IN+ + + S + A+ L I D L + +K
Sbjct: 673 IVIETIDRVGVLRDILSRLSDENINVRNAEVKTSM-GKPALIALSIDIRDHDQLEYITQK 731
Query: 83 LSVNVTIRFVKQF 95
+ I +++
Sbjct: 732 IKNMSDILEIRRV 744
>gi|57233675|ref|YP_180760.1| GTP pyrophosphokinase [Dehalococcoides ethenogenes 195]
gi|57224123|gb|AAW39180.1| GTP pyrophosphokinase [Dehalococcoides ethenogenes 195]
Length = 728
Score = 34.2 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
Query: 6 KPRFIKIQ-EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
K R + + I + ++ I + D +G+V + ++ E I+I + +
Sbjct: 629 KERLVSVDWGIPKE-ELYPASIRMQAWDRVGLVRDISTMVAEEKISILSMTVTENDDKTT 687
Query: 65 AISFLCIDGSILN--SVLEKLSVNVTIRFV 92
++ S+ ++ KL I +
Sbjct: 688 TLAMTAQIKSLSQLTRLMAKLEGIRGIISI 717
>gi|104774021|ref|YP_619001.1| hypothetical protein Ldb1025 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514039|ref|YP_812945.1| hypothetical protein LBUL_0933 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|103423102|emb|CAI97827.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116093354|gb|ABJ58507.1| ACT domain-containing protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 93
Score = 34.2 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE-KL 83
++ V D GI+ V + L E INI + + + S L +L
Sbjct: 4 ILTTVGQDKTGIIAGVSSFLAEKDINILDLSQTIMNGYFTMMMVVDVSDEADFSALSTEL 63
Query: 84 SVN 86
Sbjct: 64 KEL 66
>gi|325293404|ref|YP_004279268.1| acetolactate synthase small subunit [Agrobacterium sp. H13-3]
gi|325061257|gb|ADY64948.1| acetolactate synthase small subunit [Agrobacterium sp. H13-3]
Length = 190
Score = 34.2 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ + ++ ++ G++ V + G NI + E +S + I
Sbjct: 19 AAVENHTLSVLVSNEPGVLARVIGLFSGRGYNIESLTVS-ETEHEAHLSRITIVTRGTPI 77
Query: 79 VLEKLSV-NVTIRFV-KQFEFNV 99
VLE++ I V + + V
Sbjct: 78 VLEQIKAQLERIVPVHRVLDLTV 100
>gi|291276381|ref|YP_003516153.1| aspartokinase subunit alpha and beta [Helicobacter mustelae 12198]
gi|290963575|emb|CBG39407.1| aspartokinase, alpha and beta subunits [Helicobacter mustelae
12198]
Length = 397
Score = 34.2 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 16/58 (27%), Gaps = 1/58 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D GI + L + IN+ + I S + E L +
Sbjct: 270 DRPGIAAEIFGTLAQANINV-DMIVQTIGRDGKTDLDFTIPESEVKEAREALKRFGGV 326
>gi|288919115|ref|ZP_06413454.1| amino acid-binding ACT domain protein [Frankia sp. EUN1f]
gi|288349459|gb|EFC83697.1| amino acid-binding ACT domain protein [Frankia sp. EUN1f]
Length = 238
Score = 34.2 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 18/61 (29%), Gaps = 2/61 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID--GSILNSVLEKLSVNVTI 89
D G + V LG GI+I + + + G + + V +
Sbjct: 15 DHPGALGAVATALGAAGIDIVSLSVVEHTPAGAVDDMIVLLPPGGLADRVFTAAQSVPGV 74
Query: 90 R 90
Sbjct: 75 T 75
>gi|262374294|ref|ZP_06067570.1| GTP pyrophosphokinase [Acinetobacter junii SH205]
gi|262310852|gb|EEY91940.1| GTP pyrophosphokinase [Acinetobacter junii SH205]
Length = 768
Score = 34.2 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKL 83
I + D G++ + ++ INI + + L + +L +L
Sbjct: 693 IVVEAYDRRGLLKDLTQVIFSDQINIRQVNTISEADGIANMKLLIEVKGLAQLSRLLARL 752
Query: 84 SVNVTIRFVKQF 95
I ++
Sbjct: 753 EQQPGIISARRL 764
>gi|229032316|ref|ZP_04188289.1| Acetoin utilization protein AcuB [Bacillus cereus AH1271]
gi|228729096|gb|EEL80099.1| Acetoin utilization protein AcuB [Bacillus cereus AH1271]
Length = 214
Score = 34.2 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I E INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSELQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|169829352|ref|YP_001699510.1| GTP pyrophosphokinase [Lysinibacillus sphaericus C3-41]
gi|168993840|gb|ACA41380.1| GTP pyrophosphokinase [Lysinibacillus sphaericus C3-41]
Length = 731
Score = 34.2 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+E D++ + D GI+ + I+ E NI GR+ + A L I
Sbjct: 652 KEYPVDIE-------VSAFDRPGILNEIMQIVSETKTNILA-VSGRADRDKMATIHLTIS 703
Query: 73 -GSIL--NSVLEKLSVNVTIRFV-KQFE 96
+I + V+E++ I V +
Sbjct: 704 ISNISHLHKVVERIKQTPDIYSVQRVIN 731
>gi|159044816|ref|YP_001533610.1| homoserine dehydrogenase [Dinoroseobacter shibae DFL 12]
gi|157912576|gb|ABV94009.1| homoserine dehydrogenase [Dinoroseobacter shibae DFL 12]
Length = 428
Score = 34.2 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
D G + V +LG+ G++I +S+ + + + N+V L
Sbjct: 356 EDKPGALAKVATVLGDSGVSIDRMRQYGHESSSAPV-LIVTHKAARNAVDAALEALPKT 413
>gi|256371940|ref|YP_003109764.1| prephenate dehydratase [Acidimicrobium ferrooxidans DSM 10331]
gi|256008524|gb|ACU54091.1| prephenate dehydratase [Acidimicrobium ferrooxidans DSM 10331]
Length = 291
Score = 34.2 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 28/89 (31%), Gaps = 9/89 (10%)
Query: 14 EINFDVDIGRLM---ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
G + + AD++G++ + ++L G+N+ + +
Sbjct: 178 GHELPAPTGDDRSRLVVVPRADVVGVLAEITSVLAAAGVNLTSIVSRPLGLGDEHYFLIG 237
Query: 71 IDGSILN----SVLEKLSVNVTIRFVKQF 95
G + L +L+ V+
Sbjct: 238 TRGHAADPGLEHALGELARLGH--RVRLL 264
>gi|255521241|ref|ZP_05388478.1| (p)ppGpp synthetase [Listeria monocytogenes FSL J1-175]
Length = 696
Score = 34.2 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ N D++I + G++ + ++ NI + + +
Sbjct: 617 NDYNVDIEIYGY-------NRNGLLNDILQVINSLTSNINGVNAKVDNNKMATLVVTLQI 669
Query: 73 GSIL--NSVLEKLSVNVTIRFVKQF 95
+I V++K+ + V++
Sbjct: 670 HNINHLQRVVDKIKQIPDVYTVRRL 694
>gi|220912781|ref|YP_002488090.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrobacter chlorophenolicus A6]
gi|219859659|gb|ACL40001.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrobacter chlorophenolicus A6]
Length = 763
Score = 34.2 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 12/92 (13%)
Query: 8 RFIKIQEINFDVDIGRLMICIV-----NADILGIVVFVGNILGEYGINI--AHFHLGRSQ 60
R + + D + + +V D ++ V IL E +NI A H +
Sbjct: 667 RIV-----DVDWAPTQSSVFLVEIQVEALDRKSLLSDVTRILSENHVNILAASVHTSTDR 721
Query: 61 STEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+F D L+ VL + + V
Sbjct: 722 VAISKFAFEMGDPKYLSHVLSAVRRIDGVFDV 753
>gi|86747159|ref|YP_483655.1| PII uridylyl-transferase [Rhodopseudomonas palustris HaA2]
gi|86570187|gb|ABD04744.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris HaA2]
Length = 932
Score = 34.2 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 24/70 (34%), Gaps = 5/70 (7%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I D +I + D G++ + + + +NIA H+ E A
Sbjct: 840 VSINNNWSD---RYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATF--GERARDVF 894
Query: 70 CIDGSILNSV 79
+ + +
Sbjct: 895 YVTDLLGAQI 904
>gi|269926113|ref|YP_003322736.1| (p)ppGpp synthetase I, SpoT/RelA [Thermobaculum terrenum ATCC
BAA-798]
gi|269789773|gb|ACZ41914.1| (p)ppGpp synthetase I, SpoT/RelA [Thermobaculum terrenum ATCC
BAA-798]
Length = 721
Score = 34.2 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS--FLCIDGSILNSVLEKL 83
+ +V D +G++ V ++ IN+ + I DG+ L+ +L KL
Sbjct: 640 LQVVAIDRVGLLRDVSTVVSNEKINMRDVQTFDHKDHTVTIQFAVEVADGAELSRLLLKL 699
Query: 84 SVNVTIRFVK 93
+ V+
Sbjct: 700 ERLPDVIEVR 709
>gi|226954323|ref|ZP_03824787.1| GTP pyrophosphokinase [Acinetobacter sp. ATCC 27244]
gi|294649350|ref|ZP_06726782.1| GTP diphosphokinase [Acinetobacter haemolyticus ATCC 19194]
gi|226834901|gb|EEH67284.1| GTP pyrophosphokinase [Acinetobacter sp. ATCC 27244]
gi|292824790|gb|EFF83561.1| GTP diphosphokinase [Acinetobacter haemolyticus ATCC 19194]
Length = 768
Score = 34.2 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKL 83
I + D G++ + ++ INI + + L + +L +L
Sbjct: 693 IVVEAYDRRGLLKDLTQVIFSDQINIRQVNTISEADGIANMKLLIEVKGLAQLSRLLARL 752
Query: 84 SVNVTIRFVKQF 95
I ++
Sbjct: 753 EQQPGIISARRL 764
>gi|167043281|gb|ABZ07987.1| putative ACT domain protein [uncultured marine crenarchaeote
HF4000_ANIW141M12]
Length = 155
Score = 34.2 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEK 82
+I I + GI+ V N+ NI +G ++ E + + G ++++
Sbjct: 4 IISIRVENKPGILFKVTNLFRSRNFNIDSLTVGVMENPEFSKMVITTVGDEKQIVQIVKQ 63
Query: 83 LSVNVTIRFVKQF 95
L + VK+
Sbjct: 64 LDKMIDTIEVKRL 76
>gi|166367247|ref|YP_001659520.1| homoserine dehydrogenase [Microcystis aeruginosa NIES-843]
gi|166089620|dbj|BAG04328.1| homoserine dehydrogenase [Microcystis aeruginosa NIES-843]
Length = 432
Score = 34.2 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 25/72 (34%), Gaps = 12/72 (16%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----------SVL 80
D+ G++ +G G++G+++ + + + + + L
Sbjct: 362 RDVPGVIGHLGMAFGDHGVSLES--VVQIGIRGDLAEIVVVTHDVREGNFRNALAAIESL 419
Query: 81 EKLSVNVTIRFV 92
E + +I V
Sbjct: 420 EAIDSIPSILRV 431
>gi|2073033|gb|AAB53868.1| vacuolating cytotoxin [Helicobacter pylori]
Length = 1290
Score = 34.2 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 13/79 (16%)
Query: 2 FSDGKPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGN-----ILGEYGINIAHFHL 56
F GK + I IN + D + G + +G+ GIN+++
Sbjct: 385 FGGGKDTVVNINRINTNADGT--------IRVGGYKASLTTNAAHLHIGKGGINLSNQAS 436
Query: 57 GRSQSTEHAISFLCIDGSI 75
GRS E+ + +DG +
Sbjct: 437 GRSLLVENLTGNITVDGPL 455
>gi|39996835|ref|NP_952786.1| ACT domain-containing protein [Geobacter sulfurreducens PCA]
gi|39983723|gb|AAR35113.1| ACT domain protein [Geobacter sulfurreducens PCA]
gi|298505850|gb|ADI84573.1| ACT domain protein [Geobacter sulfurreducens KN400]
Length = 143
Score = 34.2 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
I I + G + V ILGE G+NI L + + + VL+
Sbjct: 6 ISIFIENKSGRLAEVTRILGEAGVNIRALSLADTSDFGILRLIVN-EREKAKQVLK 60
>gi|49475299|ref|YP_033340.1| GTP pyrophosphokinase [Bartonella henselae str. Houston-1]
gi|49238105|emb|CAF27312.1| GTP pyrophosphokinase [Bartonella henselae str. Houston-1]
Length = 741
Score = 34.2 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 30/86 (34%), Gaps = 11/86 (12%)
Query: 16 NFDVDIGRL---MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ D + I I+ + G + + ++ NI + R+ + + ID
Sbjct: 655 DIDAQMSERFPARINILAVNSPGSLAEITQVISANDANIQNLSFIRTAPD---FTEIMID 711
Query: 73 GSILN-----SVLEKLSVNVTIRFVK 93
+ + + +L ++ V+
Sbjct: 712 LEVWDLKHLNRIFSQLKKAGSVSTVR 737
>gi|322437264|ref|YP_004219476.1| (p)ppGpp synthetase I, SpoT/RelA [Acidobacterium sp. MP5ACTX9]
gi|321164991|gb|ADW70696.1| (p)ppGpp synthetase I, SpoT/RelA [Acidobacterium sp. MP5ACTX9]
Length = 826
Score = 34.2 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKL 83
+ IV D G++ I+ E G NI + + F+ +D L + + L
Sbjct: 752 LTIVCDDRSGMLKEFTAIIAEDGTNIRSVDSKPATDGSFMVDFVIETVDVRHLTKLTQNL 811
Query: 84 SVNVTIRFVKQFE 96
+R V++ +
Sbjct: 812 RKVPGVRDVQRVQ 824
>gi|238897618|ref|YP_002923297.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465375|gb|ACQ67149.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 739
Score = 34.2 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG---SILNSVLE 81
M+ ++ D ++ + IL +N+ + A + I+ L +L
Sbjct: 666 MLKVLAQDRSALLRDITVILANQKVNVLAIKSRSDTKKQQATIEMNIEIYNLQTLARILA 725
Query: 82 KLSVNVTIRFV 92
KL+ +
Sbjct: 726 KLNQLPDVIHA 736
>gi|320530487|ref|ZP_08031545.1| CBS domain pair [Selenomonas artemidis F0399]
gi|320137320|gb|EFW29244.1| CBS domain pair [Selenomonas artemidis F0399]
Length = 214
Score = 34.2 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
G+ + I AD G++ + +L E I+I + I + D +++V E
Sbjct: 140 GKTRLTIHVADRKGVLRDISTVLAEMDISIDSMVTMPQPDGTYEI-IIRADIPNVDTVKE 198
Query: 82 KL 83
+L
Sbjct: 199 RL 200
>gi|228935975|ref|ZP_04098785.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228823743|gb|EEM69565.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 214
Score = 34.2 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I E INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSELQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|215404938|ref|ZP_03417119.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
02_1987]
gi|215412806|ref|ZP_03421518.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
94_M4241A]
gi|215447230|ref|ZP_03433982.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
T85]
gi|289746762|ref|ZP_06506140.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis 02_1987]
gi|289759089|ref|ZP_06518467.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|294993951|ref|ZP_06799642.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
210]
gi|298526433|ref|ZP_07013842.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis 94_M4241A]
gi|289687290|gb|EFD54778.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis 02_1987]
gi|289714653|gb|EFD78665.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298496227|gb|EFI31521.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis 94_M4241A]
gi|326904578|gb|EGE51511.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis W-148]
Length = 310
Score = 34.2 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D GI+ V L G NI + + L + +++L
Sbjct: 32 RLLLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEGGTFLQRAIFHLPGLTAAVDEL 91
Query: 84 S 84
Sbjct: 92 Q 92
>gi|154494445|ref|ZP_02033765.1| hypothetical protein PARMER_03800 [Parabacteroides merdae ATCC
43184]
gi|154085889|gb|EDN84934.1| hypothetical protein PARMER_03800 [Parabacteroides merdae ATCC
43184]
Length = 183
Score = 34.2 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ I + + +G++ + I +NI + S + D +++ V++
Sbjct: 7 YTVIIFSENTVGLLNQITIIFTRRQLNIETLSVSPSAIQGIHKFTITTFADEDMIDKVVK 66
Query: 82 KLSVNVTIRFV 92
++ V I
Sbjct: 67 QIDKRVDILKA 77
>gi|15610101|ref|NP_217480.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
H37Rv]
gi|15842515|ref|NP_337552.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
CDC1551]
gi|31794140|ref|NP_856633.1| formyltetrahydrofolate deformylase [Mycobacterium bovis
AF2122/97]
gi|121638845|ref|YP_979069.1| formyltetrahydrofolate deformylase [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148662811|ref|YP_001284334.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
H37Ra]
gi|148824153|ref|YP_001288907.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
F11]
gi|167970016|ref|ZP_02552293.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis H37Ra]
gi|215428413|ref|ZP_03426332.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
T92]
gi|215431912|ref|ZP_03429831.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
EAS054]
gi|218754723|ref|ZP_03533519.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis GM
1503]
gi|224991337|ref|YP_002646026.1| putative formyltetrahydrofolate deformylase [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253797946|ref|YP_003030947.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis KZN 1435]
gi|254233050|ref|ZP_04926377.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis C]
gi|254365601|ref|ZP_04981646.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis str. Haarlem]
gi|254552040|ref|ZP_05142487.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260187986|ref|ZP_05765460.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
CPHL_A]
gi|260202104|ref|ZP_05769595.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
T46]
gi|260206286|ref|ZP_05773777.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
K85]
gi|289444525|ref|ZP_06434269.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
T46]
gi|289448633|ref|ZP_06438377.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis CPHL_A]
gi|289553247|ref|ZP_06442457.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis KZN 605]
gi|289575669|ref|ZP_06455896.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis K85]
gi|289751639|ref|ZP_06511017.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis T92]
gi|289755079|ref|ZP_06514457.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis EAS054]
gi|289763142|ref|ZP_06522520.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis GM 1503]
gi|297635586|ref|ZP_06953366.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
KZN 4207]
gi|297732584|ref|ZP_06961702.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
KZN R506]
gi|306777254|ref|ZP_07415591.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu001]
gi|306781165|ref|ZP_07419502.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu002]
gi|306789842|ref|ZP_07428164.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu004]
gi|306794655|ref|ZP_07432957.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu005]
gi|306798899|ref|ZP_07437201.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu006]
gi|306804744|ref|ZP_07441412.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu008]
gi|307085682|ref|ZP_07494795.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu012]
gi|313659916|ref|ZP_07816796.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
KZN V2475]
gi|61230088|sp|P0A5T6|PURU_MYCTU RecName: Full=Formyltetrahydrofolate deformylase; AltName:
Full=Formyl-FH(4) hydrolase
gi|61230089|sp|P0A5T7|PURU_MYCBO RecName: Full=Formyltetrahydrofolate deformylase; AltName:
Full=Formyl-FH(4) hydrolase
gi|560524|gb|AAA50945.1| purU [Mycobacterium tuberculosis]
gi|1694867|emb|CAB05413.1| PROBABLE FORMYLTETRAHYDROFOLATE DEFORMYLASE PURU (FORMYL-FH(4)
HYDROLASE) [Mycobacterium tuberculosis H37Rv]
gi|13882824|gb|AAK47366.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
CDC1551]
gi|31619735|emb|CAD96675.1| PROBABLE FORMYLTETRAHYDROFOLATE DEFORMYLASE PURU (FORMYL-FH(4)
HYDROLASE) [Mycobacterium bovis AF2122/97]
gi|121494493|emb|CAL72974.1| Probable formyltetrahydrofolate deformylase purU [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|124602109|gb|EAY61119.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis C]
gi|134151114|gb|EBA43159.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis str. Haarlem]
gi|148506963|gb|ABQ74772.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
H37Ra]
gi|148722680|gb|ABR07305.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis F11]
gi|224774452|dbj|BAH27258.1| putative formyltetrahydrofolate deformylase [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253319449|gb|ACT24052.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis KZN 1435]
gi|289417444|gb|EFD14684.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
T46]
gi|289421591|gb|EFD18792.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis CPHL_A]
gi|289437879|gb|EFD20372.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis KZN 605]
gi|289540100|gb|EFD44678.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis K85]
gi|289692226|gb|EFD59655.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis T92]
gi|289695666|gb|EFD63095.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis EAS054]
gi|289710648|gb|EFD74664.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis GM 1503]
gi|308214399|gb|EFO73798.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu001]
gi|308326057|gb|EFP14908.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu002]
gi|308333726|gb|EFP22577.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu004]
gi|308337069|gb|EFP25920.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu005]
gi|308340882|gb|EFP29733.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu006]
gi|308348697|gb|EFP37548.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu008]
gi|308364798|gb|EFP53649.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu012]
gi|323718436|gb|EGB27609.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis CDC1551A]
gi|328457720|gb|AEB03143.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis KZN 4207]
Length = 310
Score = 34.2 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D GI+ V L G NI + + L + +++L
Sbjct: 32 RLLLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEGGTFLQRAIFHLPGLTAAVDEL 91
Query: 84 S 84
Sbjct: 92 Q 92
>gi|326390352|ref|ZP_08211911.1| acetolactate synthase, small subunit [Thermoanaerobacter
ethanolicus JW 200]
gi|325993629|gb|EGD52062.1| acetolactate synthase, small subunit [Thermoanaerobacter
ethanolicus JW 200]
Length = 167
Score = 34.2 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + G++ V + G NI +G ++ + + L + D + V+
Sbjct: 2 HIISVLVNNHPGVLSRVVGLFSRRGYNIESLAVGTTEREDISRITLTVKGDDYTVIQVIR 61
Query: 82 KLSVNVTIRFVKQF 95
+L+ V + V+
Sbjct: 62 QLNKLVDVLKVQNI 75
>gi|325479481|gb|EGC82577.1| GTP diphosphokinase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 726
Score = 34.2 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 6/66 (9%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID--GSILNSV--LEKLSVNV 87
+ ++ + ++ +NI + Q + ++ + + + L+ L
Sbjct: 660 NAPSVLYDITKMISTVNVNILGINARTDQEQGTIDLIIEVNNMDQLSDVITKLKSLRTVD 719
Query: 88 TIRFVK 93
+ +K
Sbjct: 720 NVYRIK 725
>gi|300113382|ref|YP_003759957.1| Homoserine dehydrogenase [Nitrosococcus watsonii C-113]
gi|299539319|gb|ADJ27636.1| Homoserine dehydrogenase [Nitrosococcus watsonii C-113]
Length = 436
Score = 34.2 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 10/81 (12%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
+++ ++ + + + D G++ V + GE I+I + E+ +
Sbjct: 339 LVELPILSMEEVKTAYYLRMRALDQPGVLAEVTRVFGEQNISIEAIIQKEPVAEENHVPI 398
Query: 69 LCIDGSILNSVL-EKLSVNVT 88
+ + +L + E +
Sbjct: 399 IMLTQPVLERNMNEAIRRIED 419
>gi|225874635|ref|YP_002756094.1| ACT domain protein/phosphoserine phosphatase SerB [Acidobacterium
capsulatum ATCC 51196]
gi|225793330|gb|ACO33420.1| ACT domain protein/phosphoserine phosphatase SerB [Acidobacterium
capsulatum ATCC 51196]
Length = 427
Score = 34.2 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 19/86 (22%)
Query: 14 EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG 73
+++ + L+I D G+ + ++L + +NI L I
Sbjct: 14 DMSAESTPSYLLIHFSGPDRPGLTADLTHVLAAHDVNI-----------------LDIGQ 56
Query: 74 SILNSVLEK--LSVNVTIRFVKQFEF 97
++++ L L + V +
Sbjct: 57 AVVHETLALGILIEIPASKSVTSLKI 82
>gi|195952868|ref|YP_002121158.1| amino acid-binding ACT domain protein [Hydrogenobaculum sp.
Y04AAS1]
gi|195932480|gb|ACG57180.1| amino acid-binding ACT domain protein [Hydrogenobaculum sp.
Y04AAS1]
Length = 165
Score = 34.2 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
++ D GIV + IL + G NI + R + I + L
Sbjct: 4 YILTAFGKDKPGIVASITEILYKMGANIEDSSMSRLSGQFVIMLLFTSKNPIQKEDFD-L 62
Query: 84 SVNV 87
Sbjct: 63 EDIE 66
>gi|157963690|ref|YP_001503724.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella
pealeana ATCC 700345]
gi|157848690|gb|ABV89189.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella pealeana ATCC 700345]
Length = 701
Score = 34.2 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF---LCI-DGSILNSVLE 81
+ + + G + + +I+ G NI + L + + + D L +V+
Sbjct: 629 LRVEIVNHQGALAKITSIVASAGSNIHN--LTTEERDGRVFLINLRISVRDRIHLANVMR 686
Query: 82 KLSVNVTIRF 91
++ V +
Sbjct: 687 RIRVLPEVLR 696
>gi|254509730|ref|ZP_05121797.1| homoserine dehydrogenase [Rhodobacteraceae bacterium KLH11]
gi|221533441|gb|EEE36429.1| homoserine dehydrogenase [Rhodobacteraceae bacterium KLH11]
Length = 461
Score = 34.2 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVLEKLSVNVTI 89
D G + V ILG+ G++I + + + + L+ LE L +
Sbjct: 390 DKPGALAKVAAILGDAGVSIDRMRQYGHTESTAPVLIVTHKTTRTTLDHALEGLRATDVV 449
>gi|197106806|ref|YP_002132183.1| threonine dehydratase [Phenylobacterium zucineum HLK1]
gi|196480226|gb|ACG79754.1| threonine dehydratase [Phenylobacterium zucineum HLK1]
Length = 413
Score = 34.2 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 6/66 (9%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGR-----SQSTEHAISFLCI-DGSILNSV 79
+ I+ D G++ V I+G G NI R + D V
Sbjct: 340 LRIIGDDRPGLLANVSAIIGTMGANIIEVAHNRLALDVPAKGAEFDVMIETRDAQHTQEV 399
Query: 80 LEKLSV 85
++ L
Sbjct: 400 MDALRD 405
>gi|218247252|ref|YP_002372623.1| acetolactate synthase 3 regulatory subunit [Cyanothece sp. PCC
8801]
gi|257061412|ref|YP_003139300.1| acetolactate synthase 3 regulatory subunit [Cyanothece sp. PCC
8802]
gi|218167730|gb|ACK66467.1| acetolactate synthase, small subunit [Cyanothece sp. PCC 8801]
gi|256591578|gb|ACV02465.1| acetolactate synthase, small subunit [Cyanothece sp. PCC 8802]
Length = 172
Score = 34.2 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G +++ + + + D + + +
Sbjct: 3 HTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAETVGVSRITMVVPGDDDTIEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + + V
Sbjct: 63 QLYKLINVLKVNDIT 77
>gi|87200276|ref|YP_497533.1| acetolactate synthase 3 regulatory subunit [Novosphingobium
aromaticivorans DSM 12444]
gi|87135957|gb|ABD26699.1| acetolactate synthase, small subunit [Novosphingobium
aromaticivorans DSM 12444]
Length = 172
Score = 34.2 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 7/64 (10%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R ++ I + GI+ + + G NI + + +++
Sbjct: 10 ERHVLTITVDNEAGILAKIAGLFTARGYNIDSLTVADITDGHDVSRITIVTHGPPP-IID 68
Query: 82 KLSV 85
++
Sbjct: 69 QIRA 72
>gi|50086079|ref|YP_047589.1| GTP pyrophosphokinase [Acinetobacter sp. ADP1]
gi|49532055|emb|CAG69767.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((p)ppGpp synthetase) [Acinetobacter sp.
ADP1]
Length = 768
Score = 34.2 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKL 83
I I D G++ + ++ INI + + L + +L +L
Sbjct: 693 IVIDAYDRRGLLKDLTQVIFSDQINIRQVNTISEADGIANMKLLIEVKGLAQLSRLLARL 752
Query: 84 SVNVTIRFVKQF 95
I ++
Sbjct: 753 EQQPGIISARRL 764
>gi|296329631|ref|ZP_06872116.1| formyltetrahydrofolate deformylase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674028|ref|YP_003865700.1| formyltetrahydrofolate deformylase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296153129|gb|EFG93993.1| formyltetrahydrofolate deformylase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412272|gb|ADM37391.1| formyltetrahydrofolate deformylase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 300
Score = 34.2 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 15/51 (29%), Gaps = 1/51 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGIN-IAHFHLGRSQSTEHAISFLCIDGS 74
+ + D GIV V L E+G N I + D
Sbjct: 21 RLLVSCPDQPGIVSAVSAFLFEHGANIIESNQYTTDPEGGRFFLRIEFDCE 71
>gi|224826242|ref|ZP_03699344.1| Homoserine dehydrogenase [Lutiella nitroferrum 2002]
gi|224601343|gb|EEG07524.1| Homoserine dehydrogenase [Lutiella nitroferrum 2002]
Length = 436
Score = 34.2 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 24/69 (34%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I AD G++ + +L + GI+I + + A + V +
Sbjct: 354 YYLRIAAADRTGVLAEITRLLADNGISIEALIQKGADADGSAEVVILTHRVQEKQVNRAI 413
Query: 84 SVNVTIRFV 92
+ + V
Sbjct: 414 ASIEALDSV 422
>gi|254470204|ref|ZP_05083608.1| acetolactate synthase, small subunit [Pseudovibrio sp. JE062]
gi|211960515|gb|EEA95711.1| acetolactate synthase, small subunit [Pseudovibrio sp. JE062]
Length = 197
Score = 34.2 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + I+ + G++ V + G NI + ++ +H + V+
Sbjct: 21 LETHTLSIIVDNEPGVLARVIGLFSGRGYNIDSLSVSETEHEKHVSRITIVTTGTPQ-VI 79
Query: 81 EKLS 84
E++
Sbjct: 80 EQIR 83
>gi|195121854|ref|XP_002005433.1| GI20468 [Drosophila mojavensis]
gi|193910501|gb|EDW09368.1| GI20468 [Drosophila mojavensis]
Length = 514
Score = 34.2 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 16/107 (14%)
Query: 4 DGKPRFIKIQEINFDV--------DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFH 55
D P+ ++ + I D+ + + D G + I+G I I
Sbjct: 34 DKNPQSVE-RGITLDLGFSALVLDQPDGPQLQLTFVDCPGHASLIRTIIGGAQI-IDLML 91
Query: 56 LGRSQSTEHAISFLC--IDGSILNS----VLEKLSVNVTIRFVKQFE 96
L + G +L V+ K+ + E
Sbjct: 92 LVVDAQKGMQTQTAECLVIGELLEKKLIVVINKIDALPAEHRASKLE 138
>gi|90994421|ref|YP_536911.1| acetohydroxyacid synthase small subunit [Porphyra yezoensis]
gi|122194725|sp|Q1XDQ7|ILVH_PORYE RecName: Full=Acetolactate synthase small subunit; AltName:
Full=Acetohydroxy-acid synthase small subunit;
Short=AHAS; Short=ALS
gi|90818985|dbj|BAE92354.1| acetohydroxyacid synthase small subunit [Porphyra yezoensis]
Length = 174
Score = 34.2 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NIA +G ++ + + + D + + +
Sbjct: 3 HTLSVLVQDEAGVLSRISGLFARRGFNIASLAVGPAEQIGVSRITMVVQGDNRTIEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L V I V+
Sbjct: 63 QLYKLVNILNVQDVT 77
>gi|308232543|ref|ZP_07416403.2| aspartokinase ask [Mycobacterium tuberculosis SUMu001]
gi|308369206|ref|ZP_07416935.2| aspartokinase ask [Mycobacterium tuberculosis SUMu002]
gi|308371430|ref|ZP_07424943.2| aspartokinase ask [Mycobacterium tuberculosis SUMu003]
gi|308372628|ref|ZP_07429309.2| aspartokinase ask [Mycobacterium tuberculosis SUMu004]
gi|308373793|ref|ZP_07433673.2| aspartokinase ask [Mycobacterium tuberculosis SUMu006]
gi|308376199|ref|ZP_07438010.2| aspartokinase ask [Mycobacterium tuberculosis SUMu008]
gi|308379593|ref|ZP_07486844.2| aspartokinase ask [Mycobacterium tuberculosis SUMu010]
gi|308380779|ref|ZP_07491061.2| aspartokinase ask [Mycobacterium tuberculosis SUMu011]
gi|308213595|gb|EFO72994.1| aspartokinase ask [Mycobacterium tuberculosis SUMu001]
gi|308328328|gb|EFP17179.1| aspartokinase ask [Mycobacterium tuberculosis SUMu002]
gi|308328732|gb|EFP17583.1| aspartokinase ask [Mycobacterium tuberculosis SUMu003]
gi|308332574|gb|EFP21425.1| aspartokinase ask [Mycobacterium tuberculosis SUMu004]
gi|308344055|gb|EFP32906.1| aspartokinase ask [Mycobacterium tuberculosis SUMu006]
gi|308351841|gb|EFP40692.1| aspartokinase ask [Mycobacterium tuberculosis SUMu008]
gi|308356456|gb|EFP45307.1| aspartokinase ask [Mycobacterium tuberculosis SUMu010]
gi|308360403|gb|EFP49254.1| aspartokinase ask [Mycobacterium tuberculosis SUMu011]
Length = 455
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVN 86
DI G V + + +NI L E + + + + +EKL
Sbjct: 308 DIPGYAAKVFRAVADADVNI-DMVLQNVSKVEDGKTDITFTCSRDVGPAAVEKLDSL 363
>gi|291515721|emb|CBK64931.1| (p)ppGpp synthetase, RelA/SpoT family [Alistipes shahii WAL 8301]
Length = 739
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 28 IVNADILGIVVFVGNIL-GEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKLSV 85
+ D GI++ + ++ ++ INI ++ L + D L++V++KL
Sbjct: 668 LRGIDRQGILLDLAKVVSADFNINIREVNIHSHDGIFEGNVSLYVKDAESLHAVMDKLRK 727
Query: 86 NVTIRFVK 93
I VK
Sbjct: 728 IKGIESVK 735
>gi|225181038|ref|ZP_03734485.1| ACT domain-containing protein [Dethiobacter alkaliphilus AHT 1]
gi|225168235|gb|EEG77039.1| ACT domain-containing protein [Dethiobacter alkaliphilus AHT 1]
Length = 98
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Query: 20 DIGRLMICIV--NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
G I + D +GI+ V NIL E INI ++ L D
Sbjct: 6 TPGGSRIIVSVLGHDKVGIIAAVANILSESNINILDI--SQTIMQGFFSMILIADMENSK 63
Query: 78 SVLEKLSVN 86
L L
Sbjct: 64 IDLATLKEL 72
>gi|160880671|ref|YP_001559639.1| prephenate dehydrogenase [Clostridium phytofermentans ISDg]
gi|160429337|gb|ABX42900.1| Prephenate dehydrogenase [Clostridium phytofermentans ISDg]
Length = 369
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ I D G + + +LG G++I + + ++ E + + + L K
Sbjct: 300 LYIDITDEPGAIAIIATLLGSNGVSIKNIGIIHNREFEQGVLRIEL---YSEEALLKAKK 356
>gi|49481425|ref|YP_038711.1| acetoin utilization protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52140839|ref|YP_085991.1| acetoin utilization protein [Bacillus cereus E33L]
gi|118479807|ref|YP_896958.1| acetoin utilization protein [Bacillus thuringiensis str. Al Hakam]
gi|196032890|ref|ZP_03100303.1| acetoin utilization protein AcuB [Bacillus cereus W]
gi|196043905|ref|ZP_03111142.1| acetoin utilization protein AcuB [Bacillus cereus 03BB108]
gi|218905894|ref|YP_002453728.1| acetoin utilization protein AcuB [Bacillus cereus AH820]
gi|228917314|ref|ZP_04080869.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228948412|ref|ZP_04110695.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229124233|ref|ZP_04253425.1| Acetoin utilization protein AcuB [Bacillus cereus 95/8201]
gi|229186925|ref|ZP_04314080.1| Acetoin utilization protein AcuB [Bacillus cereus BGSC 6E1]
gi|229198825|ref|ZP_04325519.1| Acetoin utilization protein AcuB [Bacillus cereus m1293]
gi|301056174|ref|YP_003794385.1| acetoin utilization protein [Bacillus anthracis CI]
gi|49332981|gb|AAT63627.1| acetoin utilization protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51974308|gb|AAU15858.1| acetoin utilization protein [Bacillus cereus E33L]
gi|118419032|gb|ABK87451.1| acetoin utilization protein [Bacillus thuringiensis str. Al Hakam]
gi|195994319|gb|EDX58274.1| acetoin utilization protein AcuB [Bacillus cereus W]
gi|196025241|gb|EDX63911.1| acetoin utilization protein AcuB [Bacillus cereus 03BB108]
gi|218539906|gb|ACK92304.1| acetoin utilization protein AcuB [Bacillus cereus AH820]
gi|228584661|gb|EEK42785.1| Acetoin utilization protein AcuB [Bacillus cereus m1293]
gi|228596662|gb|EEK54327.1| Acetoin utilization protein AcuB [Bacillus cereus BGSC 6E1]
gi|228659535|gb|EEL15183.1| Acetoin utilization protein AcuB [Bacillus cereus 95/8201]
gi|228811399|gb|EEM57737.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228842355|gb|EEM87448.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|300378343|gb|ADK07247.1| acetoin utilization protein [Bacillus cereus biovar anthracis str.
CI]
Length = 214
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I E INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSELQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|30264738|ref|NP_847115.1| acetoin utilization protein AcuB [Bacillus anthracis str. Ames]
gi|47530211|ref|YP_021560.1| acetoin utilization protein AcuB [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187556|ref|YP_030809.1| acetoin utilization protein AcuB [Bacillus anthracis str. Sterne]
gi|65322035|ref|ZP_00394994.1| COG0517: FOG: CBS domain [Bacillus anthracis str. A2012]
gi|165869698|ref|ZP_02214356.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0488]
gi|167633831|ref|ZP_02392154.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0442]
gi|167638017|ref|ZP_02396295.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0193]
gi|170685795|ref|ZP_02877018.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0465]
gi|170705592|ref|ZP_02896056.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0389]
gi|177651314|ref|ZP_02934145.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0174]
gi|190568364|ref|ZP_03021272.1| acetoin utilization protein AcuB [Bacillus anthracis
Tsiankovskii-I]
gi|227817457|ref|YP_002817466.1| acetoin utilization protein AcuB [Bacillus anthracis str. CDC 684]
gi|228929717|ref|ZP_04092734.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229600423|ref|YP_002868946.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0248]
gi|254687476|ref|ZP_05151332.1| acetoin utilization protein AcuB [Bacillus anthracis str.
CNEVA-9066]
gi|254725039|ref|ZP_05186822.1| acetoin utilization protein AcuB [Bacillus anthracis str. A1055]
gi|254736777|ref|ZP_05194483.1| acetoin utilization protein AcuB [Bacillus anthracis str. Western
North America USA6153]
gi|254741814|ref|ZP_05199501.1| acetoin utilization protein AcuB [Bacillus anthracis str. Kruger B]
gi|254754588|ref|ZP_05206623.1| acetoin utilization protein AcuB [Bacillus anthracis str. Vollum]
gi|254757420|ref|ZP_05209447.1| acetoin utilization protein AcuB [Bacillus anthracis str. Australia
94]
gi|30259413|gb|AAP28601.1| acetoin utilization protein AcuB [Bacillus anthracis str. Ames]
gi|47505359|gb|AAT34035.1| acetoin utilization protein AcuB [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181483|gb|AAT56859.1| acetoin utilization protein AcuB [Bacillus anthracis str. Sterne]
gi|164714527|gb|EDR20046.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0488]
gi|167513834|gb|EDR89202.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0193]
gi|167530632|gb|EDR93334.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0442]
gi|170129717|gb|EDS98580.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0389]
gi|170670259|gb|EDT20999.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0465]
gi|172083140|gb|EDT68202.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0174]
gi|190560620|gb|EDV14597.1| acetoin utilization protein AcuB [Bacillus anthracis
Tsiankovskii-I]
gi|227005514|gb|ACP15257.1| acetoin utilization protein AcuB [Bacillus anthracis str. CDC 684]
gi|228829896|gb|EEM75516.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229264831|gb|ACQ46468.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0248]
Length = 214
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I E INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSELQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|167630613|ref|YP_001681112.1| act domain protein, putative [Heliobacterium modesticaldum Ice1]
gi|167593353|gb|ABZ85101.1| act domain protein, putative [Heliobacterium modesticaldum Ice1]
Length = 143
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
I + D G + + +IL INI + + +S + A+ ++ + ++ L
Sbjct: 72 IAVEIPDHPGGLAEILDILAGAEINIEYCYALPQKSNDKALVVFRVER-LDEAIRVLLEK 130
Query: 86 NVTIRF 91
V +
Sbjct: 131 GVGVLK 136
>gi|126653971|ref|ZP_01725808.1| GTP pyrophosphokinase [Bacillus sp. B14905]
gi|126589528|gb|EAZ83670.1| GTP pyrophosphokinase [Bacillus sp. B14905]
Length = 731
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+E D++ + D GI+ + I+ E NI GR+ + A L I
Sbjct: 652 KEYPVDIE-------VSAFDRPGILNEIMQIVSETKTNILA-VSGRADRDKMATIHLTIS 703
Query: 73 -GSIL--NSVLEKLSVNVTIRFV-KQFE 96
+I + V+E++ I V +
Sbjct: 704 ISNISHLHKVVERIKQTPDIYSVQRVIN 731
>gi|150400279|ref|YP_001324046.1| acetolactate synthase 3 regulatory subunit [Methanococcus
vannielii SB]
gi|150012982|gb|ABR55434.1| acetolactate synthase, small subunit [Methanococcus vannielii SB]
Length = 169
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 33 ILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTIR 90
G++ + + NI+ +G +++ E A + + D ++L V+++L+ V +
Sbjct: 14 RPGVLQRISGLFTRRWFNISSITVGSTENPEIARMTIVVNGDDNVLEQVIKQLNKLVEVV 73
Query: 91 FVKQFE 96
V
Sbjct: 74 KVTDLN 79
>gi|222055769|ref|YP_002538131.1| Homoserine dehydrogenase [Geobacter sp. FRC-32]
gi|221565058|gb|ACM21030.1| Homoserine dehydrogenase [Geobacter sp. FRC-32]
Length = 436
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 21/66 (31%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ I D G++ + LG+ I+I + + + + +
Sbjct: 352 SKYYIRFNAFDRPGVLAKISGALGDNNISIESMMQTARSTNCTVPIVIMTHEAREMDIRK 411
Query: 82 KLSVNV 87
LSV
Sbjct: 412 ALSVID 417
>gi|331695642|ref|YP_004331881.1| amino acid-binding ACT domain-containing protein [Pseudonocardia
dioxanivorans CB1190]
gi|326950331|gb|AEA24028.1| amino acid-binding ACT domain protein [Pseudonocardia
dioxanivorans CB1190]
Length = 219
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 6/68 (8%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID---GSILNSVLEKLSVNVT 88
D G + V + LGE G +I + A+ L ++ G + ++
Sbjct: 11 DRPGSLGAVASALGEAGADILGVDVVERADG-SAVDDLTVELPSGRPPDVLITAAESVRG 69
Query: 89 IR--FVKQ 94
++ V+
Sbjct: 70 VQVESVRP 77
>gi|325846553|ref|ZP_08169468.1| GTP diphosphokinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481311|gb|EGC84352.1| GTP diphosphokinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 726
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 7/69 (10%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV------LEKLS 84
D GI+ + ++ ++I ++ RS I L + + L+ +
Sbjct: 658 KDGTGIIFEITKLISAENVSIEAMNV-RSNENHEGIIDLTVSVPNTEKLNELIMKLKTIK 716
Query: 85 VNVTIRFVK 93
+ +I VK
Sbjct: 717 MIESIYRVK 725
>gi|313896812|ref|ZP_07830359.1| CBS domain protein [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974259|gb|EFR39727.1| CBS domain protein [Selenomonas sp. oral taxon 137 str. F0430]
Length = 214
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
G+ + I AD G++ + +L E I+I + I + D +++V E
Sbjct: 140 GKTRLTIHVADRKGVLRDISTVLAEMDISIDSMVTMPQPDGTYEI-IIRADIPNVDTVKE 198
Query: 82 KL 83
+L
Sbjct: 199 RL 200
>gi|282163861|ref|YP_003356246.1| hypothetical protein MCP_1191 [Methanocella paludicola SANAE]
gi|282156175|dbj|BAI61263.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 144
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ D+ G + + N+LG+ +NI + + ++ A+ + +D L+ L
Sbjct: 76 VEMKDVPGGLHAIANVLGKNNVNIDYAYAF-VTTSNLALLIIRVDNV--KEALKVLKE 130
>gi|295399365|ref|ZP_06809347.1| Prephenate dehydratase [Geobacillus thermoglucosidasius C56-YS93]
gi|312110075|ref|YP_003988391.1| prephenate dehydratase [Geobacillus sp. Y4.1MC1]
gi|294978831|gb|EFG54427.1| Prephenate dehydratase [Geobacillus thermoglucosidasius C56-YS93]
gi|311215176|gb|ADP73780.1| Prephenate dehydratase [Geobacillus sp. Y4.1MC1]
Length = 282
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 8/67 (11%), Positives = 21/67 (31%), Gaps = 5/67 (7%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQST-EHAISFLCIDGSILN----SVLEKLSV 85
D G + V + +N+ +++ + + ID + + + +L
Sbjct: 207 KDQPGALHQVLSAFAWRKLNLTKIESRPAKTGLGNYFFIIDIDQKMDDVLIPGAIAELEA 266
Query: 86 NVTIRFV 92
V
Sbjct: 267 LDCTVQV 273
>gi|170756642|ref|YP_001781274.1| homoserine dehydrogenase [Clostridium botulinum B1 str. Okra]
gi|169121854|gb|ACA45690.1| homoserine dehydrogenase [Clostridium botulinum B1 str. Okra]
Length = 425
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
+ + + I + G++ + ILGE ++I F + +I + D
Sbjct: 337 PVESIKSQYYLRISVKEEPGVLGKITAILGENNVSILSFIQKPKKEDFVSIVLVTHDTFE 396
Query: 76 L--NSVLEKLSVNVTIRFVKQF 95
N +EK+ + +K
Sbjct: 397 GNINKSIEKIKNLDVVDKIKSV 418
>gi|119872539|ref|YP_930546.1| threonine dehydratase [Pyrobaculum islandicum DSM 4184]
gi|83582728|dbj|BAE54303.1| serine racemase [Pyrobaculum islandicum]
gi|119673947|gb|ABL88203.1| L-threonine ammonia-lyase [Pyrobaculum islandicum DSM 4184]
Length = 402
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA-----ISFLCIDGSIL-NSVLEKLSV 85
D G + +IL + +NI + R + + + + G++ + +L++L
Sbjct: 334 DRPGTLAKASSILASHNVNILEVYHERYDPEQRPNYVRLVFIVEVPGTLDMSKLLDELEK 393
>gi|84394416|ref|ZP_00993133.1| PII uridylyl-transferase [Vibrio splendidus 12B01]
gi|84374949|gb|EAP91879.1| PII uridylyl-transferase [Vibrio splendidus 12B01]
Length = 873
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID--GSILNSVLEKLSV 85
+ D G++ VG E IN+ + + L D G + + L
Sbjct: 803 LRALDTPGLLAQVGATFAELDINLHGAKITTIGERAEDLFILTSDAGGRLSEEQEQALRE 862
>gi|332186891|ref|ZP_08388633.1| acetolactate synthase, small subunit [Sphingomonas sp. S17]
gi|332013224|gb|EGI55287.1| acetolactate synthase, small subunit [Sphingomonas sp. S17]
Length = 171
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + ++ + GI+ + + G NI + + + A+S + I S V+E
Sbjct: 9 ERHTLAVIVDNEPGILARIAGLFTARGYNIESLTVSEITA-DKAVSRITIVTSASPPVME 67
Query: 82 KL 83
++
Sbjct: 68 QI 69
>gi|226363615|ref|YP_002781397.1| aspartate kinase [Rhodococcus opacus B4]
gi|226242104|dbj|BAH52452.1| aspartokinase [Rhodococcus opacus B4]
Length = 421
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 21/69 (30%), Gaps = 3/69 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKLSVNVTI 89
D G V + E INI L E + + + +EKL+
Sbjct: 274 DTPGYAAQVFRAVAEAEINI-DMVLQNISKVETGKTDITFTLPTADGPRAVEKLTKLQGD 332
Query: 90 RFVKQFEFN 98
Q F+
Sbjct: 333 IGFTQVLFD 341
>gi|260588007|ref|ZP_05853920.1| homoserine dehydrogenase [Blautia hansenii DSM 20583]
gi|331082423|ref|ZP_08331549.1| hypothetical protein HMPREF0992_00473 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541534|gb|EEX22103.1| homoserine dehydrogenase [Blautia hansenii DSM 20583]
gi|330400909|gb|EGG80510.1| hypothetical protein HMPREF0992_00473 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 432
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 12/75 (16%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS-------VL 80
I +D G++ + ++LG+Y ++IA + E + + + VL
Sbjct: 355 IHASDTPGVLAAIASVLGKYEVSIAQMI--QKHKHEEWAELVIVTSRVKEGNFHDALLVL 412
Query: 81 EKLS---VNVTIRFV 92
EK+ ++ V
Sbjct: 413 EKMEVVQKISSVIRV 427
>gi|119492892|ref|ZP_01623941.1| aspartate kinase [Lyngbya sp. PCC 8106]
gi|119452920|gb|EAW34093.1| aspartate kinase [Lyngbya sp. PCC 8106]
Length = 613
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 25 MICIVNA-DILGIVVFVGNILGEYGIN----IAHFHLGRSQ---STEHAISFLCIDGSIL 76
+ I + D G+ V +L E+ I+ I + S + A + +D
Sbjct: 454 RLAIRHIPDRPGMAAKVFALLAEHNISVDMIIQSQRCHQVNGMLSRDIAFTVAQVDADQA 513
Query: 77 NSVLEK 82
VLE+
Sbjct: 514 QKVLEQ 519
>gi|111021268|ref|YP_704240.1| aspartate kinase [Rhodococcus jostii RHA1]
gi|110820798|gb|ABG96082.1| aspartate kinase [Rhodococcus jostii RHA1]
Length = 421
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 21/69 (30%), Gaps = 3/69 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKLSVNVTI 89
D G V + E INI L E + + + +EKL+
Sbjct: 274 DTPGYAAQVFRAVAEAEINI-DMVLQNISKVETGKTDITFTLPTADGPRAVEKLTKLQGD 332
Query: 90 RFVKQFEFN 98
Q F+
Sbjct: 333 IGFTQVLFD 341
>gi|325125729|gb|ADY85059.1| Hypothetical conserved protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 93
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE-KL 83
++ V D GI+ V + L E INI + + + S L +L
Sbjct: 4 ILTTVGQDKTGIIAGVSSFLAEKDINILDLSQTIMNGYFTMMMVVDVSDEADFSALSTEL 63
Query: 84 SVN 86
Sbjct: 64 KEL 66
>gi|313895670|ref|ZP_07829226.1| homoserine dehydrogenase [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975796|gb|EFR41255.1| homoserine dehydrogenase [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 434
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 25/68 (36%), Gaps = 5/68 (7%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL----NSVLEKLSVNV 87
D G++ + G +++ R HA + + + ++ ++ L V
Sbjct: 357 DEPGVLGEIAATFGRADVSLKSVIQARRTEDGHA-EIVAVTHVVPHAAASAAVKSLEVLP 415
Query: 88 TIRFVKQF 95
+R V+
Sbjct: 416 VVREVRSL 423
>gi|308371189|ref|ZP_07424125.2| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu003]
gi|308375941|ref|ZP_07445605.2| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu007]
gi|308378149|ref|ZP_07481696.2| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu009]
gi|308379368|ref|ZP_07486033.2| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu010]
gi|308380529|ref|ZP_07490250.2| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu011]
gi|308329578|gb|EFP18429.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu003]
gi|308344717|gb|EFP33568.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu007]
gi|308353393|gb|EFP42244.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu009]
gi|308357269|gb|EFP46120.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu010]
gi|308361282|gb|EFP50133.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis SUMu011]
Length = 305
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D GI+ V L G NI + + L + +++L
Sbjct: 27 RLLLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEGGTFLQRAIFHLPGLTAAVDEL 86
Query: 84 S 84
Sbjct: 87 Q 87
>gi|255320867|ref|ZP_05362041.1| GTP pyrophosphokinase [Acinetobacter radioresistens SK82]
gi|262380240|ref|ZP_06073395.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Acinetobacter radioresistens SH164]
gi|255302036|gb|EET81279.1| GTP pyrophosphokinase [Acinetobacter radioresistens SK82]
gi|262298434|gb|EEY86348.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Acinetobacter radioresistens SH164]
Length = 768
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKL 83
I + D G++ + ++ INI + + L + +L +L
Sbjct: 693 IVVEAYDRRGLLKDLTQVIFADQINIRQVNTISEADGIANMKLLIEVKGLAQLSRLLARL 752
Query: 84 SVNVTIRFVKQF 95
I ++
Sbjct: 753 EQQPGIISARRL 764
>gi|170692313|ref|ZP_02883476.1| Homoserine dehydrogenase [Burkholderia graminis C4D1M]
gi|170142743|gb|EDT10908.1| Homoserine dehydrogenase [Burkholderia graminis C4D1M]
Length = 272
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 29/100 (29%), Gaps = 9/100 (9%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS-----T 62
R + D + + AD+ G++ + IL + GI+I S+
Sbjct: 170 RLSNTPILPIDEVTSGYYLRLRVADVTGVLADITRILADTGISIDALLQKESEQVDANGK 229
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVT----IRFVKQFEFN 98
L ++ V + + V +
Sbjct: 230 GETDIILITHETVEKHVNAAIKTIEALKTVVSQVTKLRME 269
>gi|146337664|ref|YP_001202712.1| PII uridylyl-transferase [Bradyrhizobium sp. ORS278]
gi|166226140|sp|A4YKP3|GLND_BRASO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146190470|emb|CAL74469.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS278]
Length = 931
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I ++ +I + D G++ + + + +NIA H+ E A
Sbjct: 839 VSINNQWSEL---YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATF--GERARDVF 893
Query: 70 CIDGSILNSV 79
+ + +
Sbjct: 894 YVTDLLGAQI 903
>gi|300812420|ref|ZP_07092850.1| ACT domain protein [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|313123679|ref|YP_004033938.1| act domain-containing protein [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|300496587|gb|EFK31679.1| ACT domain protein [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|312280242|gb|ADQ60961.1| ACT domain-containing protein [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 93
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE-KL 83
++ V D GI+ V + L E INI + + + S L +L
Sbjct: 4 ILTTVGQDKTGIIAGVSSFLAEKDINILDLSQTIMNGYFTMMMVVDVSDEADFSALSTEL 63
Query: 84 SVN 86
Sbjct: 64 KEL 66
>gi|298674544|ref|YP_003726294.1| amino acid-binding ACT domain-containing protein [Methanohalobium
evestigatum Z-7303]
gi|298287532|gb|ADI73498.1| amino acid-binding ACT domain protein [Methanohalobium evestigatum
Z-7303]
Length = 147
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG 73
++ I D+ G + + N LG+ GINI + TE A+ + +D
Sbjct: 73 ETNVLGIEMEDVPGSLSNIANSLGKRGINI-DYSYAFVTKTEKALLIVRVDD 123
>gi|228967764|ref|ZP_04128780.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228791918|gb|EEM39504.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 214
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 19/57 (33%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
+ GI+ V I + INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSDLQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEAED 201
>gi|225866648|ref|YP_002752026.1| acetoin utilization protein AcuB [Bacillus cereus 03BB102]
gi|225790486|gb|ACO30703.1| acetoin utilization protein AcuB [Bacillus cereus 03BB102]
Length = 214
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I E INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSELQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|148258814|ref|YP_001243399.1| PII uridylyl-transferase [Bradyrhizobium sp. BTAi1]
gi|166226139|sp|A5ETJ9|GLND_BRASB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146410987|gb|ABQ39493.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. BTAi1]
Length = 931
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ I ++ +I + D G++ + + + +NIA H+ E A
Sbjct: 839 VSINNQWSEL---YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATF--GERARDVF 893
Query: 70 CIDGSILNSV 79
+ + +
Sbjct: 894 YVTDLLGAQI 903
>gi|148554079|ref|YP_001261661.1| formyltetrahydrofolate deformylase [Sphingomonas wittichii RW1]
gi|148499269|gb|ABQ67523.1| formyltetrahydrofolate deformylase [Sphingomonas wittichii RW1]
Length = 284
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 15/49 (30%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
++ + D GIV V L +G NI T +
Sbjct: 3 ETHILTLSCVDHPGIVAAVSTSLARHGANILEAQQFDDLLTGRFFMRVE 51
>gi|86608893|ref|YP_477655.1| homoserine dehydrogenase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557435|gb|ABD02392.1| homoserine dehydrogenase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 436
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 7/64 (10%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLG--RSQSTEHAISFLCIDGSILNSVLEKLSV 85
++ D G++ +G G + +++ + E I + + L ++
Sbjct: 362 VLAQDQPGVMGAIGTCFGRHRVSLESITQKECHQEQAEIVILTHTVREADCRQALAEIQQ 421
Query: 86 NVTI 89
+
Sbjct: 422 LPQV 425
>gi|33591961|ref|NP_879605.1| acetolactate synthase 3 regulatory subunit [Bordetella pertussis
Tohama I]
gi|33602861|ref|NP_890421.1| acetolactate synthase 3 regulatory subunit [Bordetella
bronchiseptica RB50]
gi|33571605|emb|CAE41095.1| acetolactate synthase small subunit [Bordetella pertussis Tohama
I]
gi|33577303|emb|CAE35860.1| acetolactate synthase small subunit [Bordetella bronchiseptica
RB50]
Length = 163
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+I ++ + G + V + G NI + ++ + +S L + + V+E++
Sbjct: 3 HVISVLMENEPGALSRVVGLFSARGYNIETLTVAPTE--DATLSRLTVVTVGSDEVIEQI 60
Query: 84 SVN 86
+ +
Sbjct: 61 TKH 63
>gi|218659457|ref|ZP_03515387.1| acetolactate synthase 3 regulatory subunit [Rhizobium etli IE4771]
Length = 117
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 3/80 (3%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ ++ + G++ V + G NI + + +S + I VLE
Sbjct: 22 ESHTLSVLVDNEPGVLARVIGLFSGRGYNIESLTVS-ETEHQAHLSRITIVTRGTPHVLE 80
Query: 82 KLSV-NVTIRFV-KQFEFNV 99
++ I V + + V
Sbjct: 81 QIKAQLDRIVPVHRVVDLTV 100
>gi|212704563|ref|ZP_03312691.1| hypothetical protein DESPIG_02623 [Desulfovibrio piger ATCC 29098]
gi|212671962|gb|EEB32445.1| hypothetical protein DESPIG_02623 [Desulfovibrio piger ATCC 29098]
Length = 187
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 7/49 (14%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 32 DILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAISFLCIDGSILNSV 79
D G++ + + +G+NI + + HA+ + +
Sbjct: 104 DRPGLIAAMSRVFARHGVNIDSLKAVLGQDHSNHALFVFEVKVPENADL 152
>gi|56963969|ref|YP_175700.1| hypothetical protein ABC2204 [Bacillus clausii KSM-K16]
gi|56910212|dbj|BAD64739.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 255
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 24/69 (34%), Gaps = 7/69 (10%)
Query: 30 NADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTI 89
+ + GI+ + ++LG INI + + + + +++ +
Sbjct: 11 HENRPGILGDISSLLGMLSINIVTINGIDDTRRGMLL------RTSDDDSVKRFKAILHT 64
Query: 90 R-FVKQFEF 97
V +F
Sbjct: 65 IGNVTVTKF 73
>gi|91974598|ref|YP_567257.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB5]
gi|91681054|gb|ABE37356.1| protein-P-II uridylyltransferase [Rhodopseudomonas palustris BisB5]
Length = 933
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 25/74 (33%), Gaps = 6/74 (8%)
Query: 6 KPRFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
+P I D +I + D G++ + + + +NIA H+ E A
Sbjct: 838 EPEI-SINNNWSD---RYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATF--GERA 891
Query: 66 ISFLCIDGSILNSV 79
+ + +
Sbjct: 892 RDVFYVTDLLGAQI 905
>gi|312127448|ref|YP_003992322.1| amino acid-binding ACT domain-containing protein
[Caldicellulosiruptor hydrothermalis 108]
gi|311777467|gb|ADQ06953.1| amino acid-binding ACT domain protein [Caldicellulosiruptor
hydrothermalis 108]
Length = 143
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 5/73 (6%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+I I D G + V IL I I + + + T+ A+ L ++
Sbjct: 62 NGFTVSAT---DVIAIAVEDKPGGLAKVLEILYRRDIGIEYMYAFVGKVTDQALVILKVE 118
Query: 73 GSILNSVLEKLSV 85
+ + +E L
Sbjct: 119 KA--DEAIEVLRE 129
>gi|299535673|ref|ZP_07048994.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZC1]
gi|298728873|gb|EFI69427.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZC1]
Length = 731
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+E D++ + D GI+ + I+ E NI GR+ + A L I
Sbjct: 652 KEYPVDIE-------VSAFDRPGILNEIMQIVSETKTNILA-VSGRADRDKMATIHLTIS 703
Query: 73 -GSIL--NSVLEKLSVNVTIRFV-KQFE 96
+I + V+E++ I V +
Sbjct: 704 ISNISHLHKVVERIKQTPDIYSVQRVIN 731
>gi|284044320|ref|YP_003394660.1| malate dehydrogenase (oxaloacetate- decarboxylating)
[Conexibacter woesei DSM 14684]
gi|283948541|gb|ADB51285.1| Malate dehydrogenase (oxaloacetate- decarboxylating)
[Conexibacter woesei DSM 14684]
Length = 489
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF--LCIDGSILNSVLEK 82
I + AD G++ V +G+ G I L + LC D S + +
Sbjct: 12 TIRVEIADRPGMLGRVATAIGDAGGTIGAVDLVAIEDGLAVRDITALCSDQSEWDGITAA 71
Query: 83 LSVNVTIR 90
++ R
Sbjct: 72 IAAVDGTR 79
>gi|229163661|ref|ZP_04291609.1| Acetoin utilization protein AcuB [Bacillus cereus R309803]
gi|228619798|gb|EEK76676.1| Acetoin utilization protein AcuB [Bacillus cereus R309803]
Length = 214
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I + INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSDLQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|118594683|ref|ZP_01552030.1| homoserine dehydrogenase [Methylophilales bacterium HTCC2181]
gi|118440461|gb|EAV47088.1| homoserine dehydrogenase [Methylophilales bacterium HTCC2181]
Length = 433
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 7/76 (9%), Positives = 22/76 (28%), Gaps = 4/76 (5%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL 76
+ + + + G++ + NI + I+I Q + +
Sbjct: 344 IEEVWSEFYLRLTMENKSGLLAKITNIFANHKISIDALVHKEVQEDNQDPDIFLVSSKVQ 403
Query: 77 N----SVLEKLSVNVT 88
V++++
Sbjct: 404 EHQINKVIKEIEALPE 419
>gi|78042961|ref|YP_360342.1| hypothetical protein CHY_1510 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995076|gb|ABB13975.1| ACT domain protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 91
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ +I ++ D +GI+ V +L E +NI ++ + + +D
Sbjct: 3 EKALITVIGEDRVGIIAKVATLLAEANVNILDI--SQTITGGLFTMIMMVD 51
>gi|117928241|ref|YP_872792.1| ACT domain-containing protein [Acidothermus cellulolyticus 11B]
gi|117648704|gb|ABK52806.1| ACT domain-containing protein [Acidothermus cellulolyticus 11B]
Length = 135
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 20/52 (38%)
Query: 17 FDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
++ + + + D +G + V L + GIN+ + + + +
Sbjct: 68 LELSPRKHAFLVQDDDRVGAMAEVAGKLADAGINVTAAAAVAAGNGRYGMLL 119
>gi|116671169|ref|YP_832102.1| homoserine dehydrogenase [Arthrobacter sp. FB24]
gi|116611278|gb|ABK04002.1| homoserine dehydrogenase [Arthrobacter sp. FB24]
Length = 438
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 7/94 (7%)
Query: 9 FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF 68
K+ + D I + AD G++ + + E+G++I + + +
Sbjct: 339 IGKVPALPIDAVNTSYYIGLDVADQPGVLAKIAQLFAEHGVSIEIMRQTIHRDADSNVES 398
Query: 69 LC---IDGSILNSVL----EKLSVNVTIRFVKQF 95
+ + L + + I V
Sbjct: 399 AELRIVTHRATEAALAATVQAVKGLDVINSVTSV 432
>gi|47565083|ref|ZP_00236126.1| acetoin utilization protein AcuB, probable, putative [Bacillus
cereus G9241]
gi|229158271|ref|ZP_04286338.1| Acetoin utilization protein AcuB [Bacillus cereus ATCC 4342]
gi|47557869|gb|EAL16194.1| acetoin utilization protein AcuB, probable, putative [Bacillus
cereus G9241]
gi|228625229|gb|EEK81989.1| Acetoin utilization protein AcuB [Bacillus cereus ATCC 4342]
Length = 214
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I + INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSDLQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|269960722|ref|ZP_06175094.1| Formyltetrahydrofolate deformylase [Vibrio harveyi 1DA3]
gi|269834799|gb|EEZ88886.1| Formyltetrahydrofolate deformylase [Vibrio harveyi 1DA3]
Length = 277
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 26/60 (43%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + + +D G++ + NI ++ +NI H + ++ H ++G + L
Sbjct: 1 MEKKTLLTHCSDAPGLISKITNICYKHQLNIVHNNEFVDNTSGHFFMRTELEGYFNDQTL 60
>gi|269214768|ref|ZP_06158810.1| acetolactate synthase, small subunit [Neisseria lactamica ATCC
23970]
gi|269209110|gb|EEZ75565.1| acetolactate synthase, small subunit [Neisseria lactamica ATCC
23970]
Length = 171
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 7/71 (9%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ ++ + G + V + NI + ++ + + D ++ + +
Sbjct: 11 HILSVLMENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLSRMTIVTHGDEQVIEQITK 70
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 71 QLNKLIEVIKV 81
>gi|78211626|ref|YP_380405.1| aspartate kinase [Synechococcus sp. CC9605]
gi|78196085|gb|ABB33850.1| aspartate kinase [Synechococcus sp. CC9605]
Length = 601
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 12 IQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF--- 68
+ + +VD ++ D GI + L E GIN+ + + + I+F
Sbjct: 263 VDGME-EVDGQAVLALSQIPDQPGIAARLFETLSEAGINVDLIIQATHEGSSNDITFTVS 321
Query: 69 ---LCIDGSILNSVLEKL 83
L + + VL++L
Sbjct: 322 EADLELARPVCQKVLDQL 339
>gi|327401159|ref|YP_004341998.1| amino acid-binding ACT domain-containing protein [Archaeoglobus
veneficus SNP6]
gi|327316667|gb|AEA47283.1| amino acid-binding ACT domain protein [Archaeoglobus veneficus
SNP6]
Length = 140
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG-SILNSVLEK 82
D G + + LG INI + + + A+ L +D +LEK
Sbjct: 80 EDEPGGLYKIAKALGNANINIEYVYAFTFG-GDKALIILRVDDIDKATEILEK 131
>gi|325686219|gb|EGD28265.1| ACT domain protein [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 93
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE-KL 83
++ V D GI+ V + L E INI + + + S L +L
Sbjct: 4 ILTTVGQDQTGIIAGVSSFLAEKDINILDLSQTIMNGYFTMMMVVDVSDEADFSALSTEL 63
Query: 84 SVN 86
Sbjct: 64 KEL 66
>gi|312866245|ref|ZP_07726464.1| acetolactate synthase, small subunit [Streptococcus downei F0415]
gi|311098218|gb|EFQ56443.1| acetolactate synthase, small subunit [Streptococcus downei F0415]
Length = 160
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLE 81
M+ + G++ +L INI G ++ + ID + L +++
Sbjct: 4 MLTARLRNTAGVLNRFTGVLLRKQINIEEVSAGHTEEEGVTRITVIIDVASLEEADLIIK 63
Query: 82 KLSVNVTIRFVKQFE 96
+L+ + + V+
Sbjct: 64 QLNRLIDVIRVRDIT 78
>gi|237650342|ref|ZP_04524594.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae CCRI 1974]
gi|237822030|ref|ZP_04597875.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae CCRI 1974M2]
Length = 158
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G ++ + + ID + + V + +
Sbjct: 4 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGATEDPNVSRITIIIDVASHDEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ ++
Sbjct: 64 QLNRQIDVIRIRDIT 78
>gi|256827308|ref|YP_003151267.1| acetolactate synthase, small subunit [Cryptobacterium curtum DSM
15641]
gi|256583451|gb|ACU94585.1| acetolactate synthase, small subunit [Cryptobacterium curtum DSM
15641]
Length = 162
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNS 78
+ R ++ I+ + G++ V ++ G NI + ++ + + +C D +
Sbjct: 1 MSRHILSILVENKPGVLSRVTGLISRRGFNIESLAVAPTEDVNMSRLTAVVCADEVLFEQ 60
Query: 79 VLEKLSVNVTIRFVKQF 95
V ++L V++ + +
Sbjct: 61 VTKQLHKLVSVYKINEI 77
>gi|229087225|ref|ZP_04219372.1| Acetoin utilization protein AcuB [Bacillus cereus Rock3-44]
gi|228696106|gb|EEL48944.1| Acetoin utilization protein AcuB [Bacillus cereus Rock3-44]
Length = 214
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I + INI + ++ + I V+E L
Sbjct: 145 KNEPGILGKVVAIFSDSHINIVSVLVYPAKDENDKVLVFRIQTMNPLRVIEALEK 199
>gi|229105293|ref|ZP_04235942.1| Acetoin utilization protein AcuB [Bacillus cereus Rock3-28]
gi|228678219|gb|EEL32447.1| Acetoin utilization protein AcuB [Bacillus cereus Rock3-28]
Length = 214
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I + INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSDLQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|212696428|ref|ZP_03304556.1| hypothetical protein ANHYDRO_00966 [Anaerococcus hydrogenalis DSM
7454]
gi|212676580|gb|EEB36187.1| hypothetical protein ANHYDRO_00966 [Anaerococcus hydrogenalis DSM
7454]
Length = 89
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
++ I+ D GIV V +L ++ INI F+ + + + + +D + N EK+
Sbjct: 4 ILTIIGNDKPGIVYRVSELLYKFNINILDFNQTIMEK--NFVGIMNVDMTNTNESFEKIK 61
Query: 85 V 85
Sbjct: 62 D 62
>gi|123966554|ref|YP_001011635.1| acetolactate synthase 3 regulatory subunit [Prochlorococcus
marinus str. MIT 9515]
gi|123200920|gb|ABM72528.1| Acetolactate synthase small subunit [Prochlorococcus marinus str.
MIT 9515]
Length = 174
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G +++ + + D L + +
Sbjct: 3 HTLSVLVEDESGALSRISGLFARRGFNIDSLAVGPAETKGSSRLTMVVEGDNETLQQMTK 62
Query: 82 KLSVNVTIRFV 92
+L+ + V
Sbjct: 63 QLNKLFNVLGV 73
>gi|206900824|ref|YP_002250910.1| acetolactate synthase, small subunit [Dictyoglomus thermophilum
H-6-12]
gi|206739927|gb|ACI18985.1| acetolactate synthase, small subunit [Dictyoglomus thermophilum
H-6-12]
Length = 160
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 8/71 (11%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ + + G NI + ++ + L + D +L + +
Sbjct: 3 HTLSLIVENKPGVLARIAGLFSRRGYNIESLAVNTTEVPNLSRITLVVKGDEKVLEQITK 62
Query: 82 KLSVNVTIRFV 92
+ + + V
Sbjct: 63 QAYKLIEVIKV 73
>gi|167746707|ref|ZP_02418834.1| hypothetical protein ANACAC_01418 [Anaerostipes caccae DSM 14662]
gi|167653667|gb|EDR97796.1| hypothetical protein ANACAC_01418 [Anaerostipes caccae DSM 14662]
Length = 170
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKL 83
+ IV + G++ + + G NI ++Q +++ + + D +IL + +L
Sbjct: 10 LSIVAENNPGVLSRISGLFSRRGYNIDSITACKTQDEKYSRMTIAVSGDDTILAQIKNQL 69
Query: 84 SVNVTIR 90
+
Sbjct: 70 IKLEDVI 76
>gi|15614952|ref|NP_243255.1| hypothetical protein BH2389 [Bacillus halodurans C-125]
gi|10175009|dbj|BAB06108.1| BH2389 [Bacillus halodurans C-125]
Length = 257
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Query: 27 CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-NSVLEKLSV 85
++ + G++ + +ILG NI + I + D + ++LE +
Sbjct: 10 YQIHKNRPGLLGDISSILGMLSCNIVTINGVDDMRRGMLIRSVDDDQILRFRTILETIED 69
Query: 86 N 86
Sbjct: 70 I 70
>gi|310767784|gb|ADP12734.1| Formyltetrahydrofolate deformylase [Erwinia sp. Ejp617]
Length = 282
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR- 90
D G++ + NI ++ +NI + T H ++G ++ L L+
Sbjct: 17 DAKGLIAKITNICYKHELNIVQNNEFVDHRTGHFFMRTELEGIFNDAAL--LADLDGALP 74
Query: 91 --FVKQFE 96
V++
Sbjct: 75 AGSVRELH 82
>gi|310826383|ref|YP_003958740.1| hypothetical protein ELI_0763 [Eubacterium limosum KIST612]
gi|308738117|gb|ADO35777.1| hypothetical protein ELI_0763 [Eubacterium limosum KIST612]
Length = 143
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
D G + + ILG+ IN+ + + ++ + A L ++ +E LS
Sbjct: 78 DEPGALKNILKILGDSNINLEYTYAFITRKKDLAYMILRVED--NEKAIEALS 128
>gi|70726545|ref|YP_253459.1| prephenate dehydrogenase [Staphylococcus haemolyticus JCSC1435]
gi|123660149|sp|Q4L672|TYRA_STAHJ RecName: Full=Prephenate dehydrogenase; Short=PDH
gi|68447269|dbj|BAE04853.1| prephenate dehydrogenase [Staphylococcus haemolyticus JCSC1435]
Length = 363
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ + D G++ V +IL + I+I++ L + E + L I +
Sbjct: 297 LYVDIPDKSGMISKVTSILSLHNISISN--LKILEIREDILGALQISFKTPEDRERGIKA 354
Query: 86 NVTI 89
Sbjct: 355 LSDF 358
>gi|87122932|ref|ZP_01078796.1| homoserine dehydrogenase [Marinomonas sp. MED121]
gi|86161781|gb|EAQ63082.1| homoserine dehydrogenase [Marinomonas sp. MED121]
Length = 420
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLC--IDGSILNSV 79
+ + D G++ + +L GI+I R + ++ + + S +N+
Sbjct: 338 GYFLNMTIQDRAGVLANITQLLSANGISIESVIQRERDEIGLVSLVVMTHVVKESNMNAA 397
Query: 80 LEKLSVNVTI 89
+ + +
Sbjct: 398 IAAIEALPDV 407
>gi|229018264|ref|ZP_04175136.1| Prephenate dehydrogenase [Bacillus cereus AH1273]
gi|229024451|ref|ZP_04180900.1| Prephenate dehydrogenase [Bacillus cereus AH1272]
gi|228736852|gb|EEL87398.1| Prephenate dehydrogenase [Bacillus cereus AH1272]
gi|228743032|gb|EEL93160.1| Prephenate dehydrogenase [Bacillus cereus AH1273]
Length = 264
Score = 33.9 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 20/56 (35%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
+ + D +G + + +IL E I+I + + ++ + +
Sbjct: 188 AIPAYHDLYVDVLDKVGALAHITSILAEEEISITNLQIIEAREGLLGVLRISFQRE 243
>gi|206602438|gb|EDZ38919.1| Homoserine dehydrogenase [Leptospirillum sp. Group II '5-way CG']
Length = 443
Score = 33.9 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 7/91 (7%)
Query: 4 DGKPR--FIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+ + R + I + + D G + ++ +LGE GI+I +
Sbjct: 343 NDRIRRPVTGLPGIR-----SEYYLRFMAPDSPGTLSYLSGVLGENGISIESVIQKGRKM 397
Query: 62 TEHAISFLCIDGSILNSVLEKLSVNVTIRFV 92
+ + +SV L++ V
Sbjct: 398 GGSVPVVILTHTAPESSVRTALNIIDRSVHV 428
>gi|124514768|gb|EAY56280.1| Homoserine dehydrogenase [Leptospirillum rubarum]
Length = 443
Score = 33.9 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 25/71 (35%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ + D G + ++ +LGE GI+I + + + +SV
Sbjct: 358 SEYYLRFMAPDSPGTLSYLSGVLGENGISIESVIQKGRKMGGSVPVVILTHTAPESSVRT 417
Query: 82 KLSVNVTIRFV 92
L++ V
Sbjct: 418 ALNIIDRSVHV 428
>gi|83646423|ref|YP_434858.1| dehydrogenase [Hahella chejuensis KCTC 2396]
gi|83634466|gb|ABC30433.1| probable dehydrogenase [Hahella chejuensis KCTC 2396]
Length = 380
Score = 33.9 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 7/42 (16%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 10 IKIQEINFDVDIGRLMICIVN--ADILGIVVFVGNILGEYGI 49
+++ + +V +I I N D ++ + N++ E +
Sbjct: 61 VRVTDNPVEVIPQADLIFITNPANDRPRVLAQIANLISEDKV 102
>gi|15889323|ref|NP_355004.1| acetolactate synthase 3 regulatory subunit [Agrobacterium
tumefaciens str. C58]
gi|15157162|gb|AAK87789.1| acetolactate synthase, small subunit [Agrobacterium tumefaciens
str. C58]
Length = 190
Score = 33.9 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ + ++ ++ G++ V + G NI + E +S + I
Sbjct: 19 AAVENHTLSVLVSNEPGVLARVIGLFSGRGYNIESLTVS-ETEHEAHLSRITIVTRGTPI 77
Query: 79 VLEKLSV-NVTIRFV-KQFEFNV 99
VLE++ I V + + V
Sbjct: 78 VLEQIKAQLERIVPVHRVLDLTV 100
>gi|331090438|ref|ZP_08339319.1| hypothetical protein HMPREF1025_02902 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330401185|gb|EGG80778.1| hypothetical protein HMPREF1025_02902 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 425
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN---SVLEKLSVNV 87
+ G++ + + GE+ ++IA + ++ T+ A + + S L +L
Sbjct: 355 ENCPGVLAQIAKVFGEHKVSIAR-VVQKNAKTDRAELVIVTEKVKEKHMGSALCELKEMK 413
Query: 88 TIRFV 92
+I V
Sbjct: 414 SIFEV 418
>gi|196040830|ref|ZP_03108128.1| acetoin utilization protein AcuB [Bacillus cereus NVH0597-99]
gi|196028284|gb|EDX66893.1| acetoin utilization protein AcuB [Bacillus cereus NVH0597-99]
Length = 214
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I + INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSDLQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|95931297|ref|ZP_01314014.1| amino acid-binding ACT [Desulfuromonas acetoxidans DSM 684]
gi|95132657|gb|EAT14339.1| amino acid-binding ACT [Desulfuromonas acetoxidans DSM 684]
Length = 143
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
I I + G + V LG+ G+NI L + + + L++
Sbjct: 6 ISIFIENKSGRLAEVTQALGDSGVNIRALSLADTSDFGILRLIVD-KTDVAKQALKE 61
>gi|33861710|ref|NP_893271.1| acetolactate synthase 3 regulatory subunit [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|33640078|emb|CAE19613.1| Acetolactate synthase small subunit [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 174
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G +++ + + D L + +
Sbjct: 3 HTLSVLVEDESGALSRISGLFARRGFNIDSLAVGPAETKGISRLTMVVEGDNETLQQMTK 62
Query: 82 KLSVNVTIRFV 92
+L+ + V
Sbjct: 63 QLNKLFNVLGV 73
>gi|329944058|ref|ZP_08292324.1| aspartate kinase [Actinomyces sp. oral taxon 170 str. F0386]
gi|328531104|gb|EGF57955.1| aspartate kinase [Actinomyces sp. oral taxon 170 str. F0386]
Length = 509
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 22/74 (29%), Gaps = 9/74 (12%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL-----CIDGSILNSVLEKLSVN 86
D+ G + I+ NI + + ++ + D + LE
Sbjct: 361 DVPGAAARIFAIVAGTDANI-DMIVQDVSAEGTGLTNISFTCPDGDSATAREALEAAREE 419
Query: 87 VTIRFVKQFEFNVD 100
+ + FN D
Sbjct: 420 LGF---RSLHFNPD 430
>gi|259908295|ref|YP_002648651.1| Formyltetrahydrofolate deformylase [Erwinia pyrifoliae Ep1/96]
gi|224963917|emb|CAX55421.1| Formyltetrahydrofolate deformylase [Erwinia pyrifoliae Ep1/96]
gi|283478230|emb|CAY74146.1| formyltetrahydrofolate deformylase [Erwinia pyrifoliae DSM 12163]
Length = 282
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR- 90
D G++ + NI ++ +NI + T H ++G ++ L L+
Sbjct: 17 DAKGLIAKITNICYKHELNIVQNNEFVDHRTGHFFMRTELEGIFNDAAL--LADLDGALP 74
Query: 91 --FVKQFE 96
V++
Sbjct: 75 AGSVRELH 82
>gi|261856487|ref|YP_003263770.1| acetolactate synthase, small subunit [Halothiobacillus
neapolitanus c2]
gi|261836956|gb|ACX96723.1| acetolactate synthase, small subunit [Halothiobacillus
neapolitanus c2]
Length = 166
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I I+ + G + V + G NI + + + L D I+ +++
Sbjct: 3 HIISILIENEAGALSRVAGLFSARGYNIESLCVAPTVDETLSRMTLVTRGDEQIIEQIIK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 63 QLNKLIDVIKV 73
>gi|254456187|ref|ZP_05069616.1| RelA/SpoT family protein [Candidatus Pelagibacter sp. HTCC7211]
gi|207083189|gb|EDZ60615.1| RelA/SpoT family protein [Candidatus Pelagibacter sp. HTCC7211]
Length = 581
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 6/38 (15%), Positives = 17/38 (44%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS 61
+ I D G + + +++G + +NI++ +
Sbjct: 490 TTLWISLPDQPGQLGDISSLIGSHKLNISNVEMVGKNP 527
>gi|156124983|gb|ABU50808.1| GTP pyrophosphokinase [Acinetobacter venetianus]
Length = 729
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKL 83
I + D G++ + ++ INI + + L + +L +L
Sbjct: 654 IVVEAYDRRGLLKDLTQVIFSDQINIRQVNTISEADGIANMKLLIEVKGLAQLSRLLARL 713
Query: 84 SVNVTIRFVKQF 95
I ++
Sbjct: 714 EQQPGIISARRL 725
>gi|153835807|ref|ZP_01988474.1| formyltetrahydrofolate deformylase [Vibrio harveyi HY01]
gi|156973670|ref|YP_001444577.1| formyltetrahydrofolate deformylase [Vibrio harveyi ATCC BAA-1116]
gi|148867444|gb|EDL66836.1| formyltetrahydrofolate deformylase [Vibrio harveyi HY01]
gi|156525264|gb|ABU70350.1| hypothetical protein VIBHAR_01373 [Vibrio harveyi ATCC BAA-1116]
Length = 277
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 26/60 (43%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL 80
+ + + +D G++ + NI ++ +NI H + ++ H ++G + L
Sbjct: 1 MEKKTLLTHCSDAPGLISKITNICYKHQLNIVHNNEFVDNTSGHFFMRTELEGYFNDQTL 60
>gi|153816114|ref|ZP_01968782.1| hypothetical protein RUMTOR_02361 [Ruminococcus torques ATCC 27756]
gi|317502046|ref|ZP_07960228.1| homoserine dehydrogenase [Lachnospiraceae bacterium 8_1_57FAA]
gi|145846599|gb|EDK23517.1| hypothetical protein RUMTOR_02361 [Ruminococcus torques ATCC 27756]
gi|316896520|gb|EFV18609.1| homoserine dehydrogenase [Lachnospiraceae bacterium 8_1_57FAA]
Length = 425
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN---SVLEKLSVNV 87
+ G++ + + GE+ ++IA + ++ T+ A + + S L +L
Sbjct: 355 ENCPGVLAQIAKVFGEHKVSIAR-VVQKNAKTDRAELVIVTEKVKEKHMGSALCELKEMK 413
Query: 88 TIRFV 92
+I V
Sbjct: 414 SIFEV 418
>gi|124027203|ref|YP_001012523.1| aspartokinase domain-containing protein [Hyperthermus butylicus DSM
5456]
gi|123977897|gb|ABM80178.1| conserved archaeal protein, aspartokinase domain [Hyperthermus
butylicus DSM 5456]
Length = 238
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 8/63 (12%)
Query: 17 FDVDIGRLMICIVN----ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+V + ++ IV+ + G ++ +IL GINI I L +D
Sbjct: 151 IEVYPDQAVLVIVSPPAVVETPGFTAYITSILARNGININQI----ESVYTDTILVLSLD 206
Query: 73 GSI 75
++
Sbjct: 207 DAL 209
>gi|223043085|ref|ZP_03613132.1| prephenate dehydrogenase [Staphylococcus capitis SK14]
gi|222443296|gb|EEE49394.1| prephenate dehydrogenase [Staphylococcus capitis SK14]
Length = 363
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ + D G++ V +IL + I+I++ L + E L I + V
Sbjct: 297 LYVDIPDKPGMISKVTHILSLHNISISN--LKILEVREDIYGALQISFKNPEDRERGIKV 354
Query: 86 NVTI 89
Sbjct: 355 LKNF 358
>gi|218507735|ref|ZP_03505613.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase protein
[Rhizobium etli Brasil 5]
Length = 186
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI-DGSILNSVLEK 82
I + + G + V + +NI + R + + + + D LN +L +
Sbjct: 112 RIMVNGLNEPGTLAKVAQTVASLDVNIRLLNTVRVAADFTEMMLEVEVWDLRQLNQLLAQ 171
Query: 83 LSVNVTIRFVKQF 95
+ I V++
Sbjct: 172 MKELDCIATVRRL 184
>gi|111221684|ref|YP_712478.1| putative prephenate dehydrogenase [Frankia alni ACN14a]
gi|111149216|emb|CAJ60901.1| putative prephenate dehydrogenase [Frankia alni ACN14a]
Length = 371
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Query: 31 ADILGIVVFVGNILGEYGINIAH---FHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNV 87
D G + + ++ + +NI F L +D ++ +S++++L+
Sbjct: 307 DDRPGQLAAIVGLISRWDVNIEDVGPFEHSLDAPAGIV--ELAVDPAVADSLVDRLTATG 364
Query: 88 TI 89
Sbjct: 365 WT 366
>gi|89894113|ref|YP_517600.1| hypothetical protein DSY1367 [Desulfitobacterium hafniense Y51]
gi|219668512|ref|YP_002458947.1| acetolactate synthase, small subunit [Desulfitobacterium
hafniense DCB-2]
gi|89333561|dbj|BAE83156.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219538772|gb|ACL20511.1| acetolactate synthase, small subunit [Desulfitobacterium
hafniense DCB-2]
Length = 159
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLE 81
+ ++ + G++ V + NI + +++ + + +DG ++ V +
Sbjct: 3 HTLAVLVENNPGVLTRVAGLFARRAYNINSLSVCQTEHPGISRMTIVVDGDDTVIEQVSK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L V + V
Sbjct: 63 QLHKLVVVHKVTDLT 77
>gi|299529844|ref|ZP_07043276.1| Pb/Zn/Cd transporting ATPase ZntA [Comamonas testosteroni S44]
gi|298722147|gb|EFI63072.1| Pb/Zn/Cd transporting ATPase ZntA [Comamonas testosteroni S44]
Length = 975
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 8/95 (8%)
Query: 8 RFIKIQEI-NFDVDIGRLMI-CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R I I D ++ + + + + L + G+ + G + A
Sbjct: 213 RLGAINGIERLDFNLMGRRLDVLHHLPDP---APILKALNDVGMKASIERSGDTAPQGQA 269
Query: 66 ISFLC-IDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
I + +D +L K + VK FN+
Sbjct: 270 IYLIEKMDCPTEEGLLRK--ALEGMPGVKALNFNL 302
>gi|255262492|ref|ZP_05341834.1| acetolactate synthase, small subunit [Thalassiobium sp. R2A62]
gi|255104827|gb|EET47501.1| acetolactate synthase, small subunit [Thalassiobium sp. R2A62]
Length = 187
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R + ++ + G++ V + G NI + E S + + + V++
Sbjct: 27 ERHTLAVIVENEPGVLARVIGLFSGRGYNIESLTVS-EIDHESRRSRITVVTAGTPQVID 85
Query: 82 KL-SVNVTIRFVKQFE 96
++ + I V +
Sbjct: 86 QIHAQLGRIIPVHEVH 101
>gi|228987915|ref|ZP_04148023.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|300118895|ref|ZP_07056608.1| acetoin utilization protein AcuB [Bacillus cereus SJ1]
gi|228771838|gb|EEM20296.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|298723740|gb|EFI64469.1| acetoin utilization protein AcuB [Bacillus cereus SJ1]
Length = 214
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I + INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSDLQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|229062351|ref|ZP_04199668.1| Acetoin utilization protein AcuB [Bacillus cereus AH603]
gi|228716920|gb|EEL68606.1| Acetoin utilization protein AcuB [Bacillus cereus AH603]
Length = 214
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I + INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSDLQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|255282004|ref|ZP_05346559.1| ACT domain protein [Bryantella formatexigens DSM 14469]
gi|255267323|gb|EET60528.1| ACT domain protein [Bryantella formatexigens DSM 14469]
Length = 134
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I + G + + IL E INI LG + + + S ++ L
Sbjct: 3 NQLAIFAENKKGTMQKITGILAENDINI----LGSVTNDSAEYGIIRMLVSKPEEAMKAL 58
Query: 84 SV 85
Sbjct: 59 CE 60
>gi|239827872|ref|YP_002950496.1| prephenate dehydratase [Geobacillus sp. WCH70]
gi|239808165|gb|ACS25230.1| Prephenate dehydratase [Geobacillus sp. WCH70]
Length = 282
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 8/67 (11%), Positives = 20/67 (29%), Gaps = 5/67 (7%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQST-EHAISFLCIDGSILN----SVLEKLSV 85
D G + V + +N+ +++ + + ID + + +L
Sbjct: 207 KDQPGALHQVLSAFAWRKLNLTKIESRPAKTGLGNYFFIIDIDQKMDEVLIPGAIAELEA 266
Query: 86 NVTIRFV 92
V
Sbjct: 267 LDCTVQV 273
>gi|42783849|ref|NP_981096.1| acetoin utilization protein AcuB [Bacillus cereus ATCC 10987]
gi|229076174|ref|ZP_04209142.1| Acetoin utilization protein AcuB [Bacillus cereus Rock4-18]
gi|229093766|ref|ZP_04224865.1| Acetoin utilization protein AcuB [Bacillus cereus Rock3-42]
gi|229118155|ref|ZP_04247514.1| Acetoin utilization protein AcuB [Bacillus cereus Rock1-3]
gi|229175379|ref|ZP_04302894.1| Acetoin utilization protein AcuB [Bacillus cereus MM3]
gi|42739779|gb|AAS43704.1| acetoin utilization protein AcuB [Bacillus cereus ATCC 10987]
gi|228608211|gb|EEK65518.1| Acetoin utilization protein AcuB [Bacillus cereus MM3]
gi|228665378|gb|EEL20861.1| Acetoin utilization protein AcuB [Bacillus cereus Rock1-3]
gi|228689651|gb|EEL43459.1| Acetoin utilization protein AcuB [Bacillus cereus Rock3-42]
gi|228707037|gb|EEL59242.1| Acetoin utilization protein AcuB [Bacillus cereus Rock4-18]
gi|324328560|gb|ADY23820.1| acetoin utilization protein AcuB [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 214
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I + INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSDLQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|15900363|ref|NP_344967.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae TIGR4]
gi|116515671|ref|YP_815915.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae D39]
gi|148983839|ref|ZP_01817158.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae SP3-BS71]
gi|148988198|ref|ZP_01819661.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae SP6-BS73]
gi|148993987|ref|ZP_01823357.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae SP9-BS68]
gi|148996847|ref|ZP_01824565.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae SP11-BS70]
gi|149003542|ref|ZP_01828416.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae SP14-BS69]
gi|149006418|ref|ZP_01830130.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae SP18-BS74]
gi|149012196|ref|ZP_01833305.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae SP19-BS75]
gi|149023731|ref|ZP_01836211.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae SP23-BS72]
gi|168482684|ref|ZP_02707636.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
CDC1873-00]
gi|168485578|ref|ZP_02710086.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
CDC1087-00]
gi|168488134|ref|ZP_02712333.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
SP195]
gi|168576837|ref|ZP_02722687.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
MLV-016]
gi|169834441|ref|YP_001693948.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae Hungary19A-6]
gi|194396942|ref|YP_002037123.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae G54]
gi|221231308|ref|YP_002510460.1| acetolactate synthase small subunit [Streptococcus pneumoniae
ATCC 700669]
gi|225854017|ref|YP_002735529.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae JJA]
gi|225856173|ref|YP_002737684.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae P1031]
gi|225858295|ref|YP_002739805.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae 70585]
gi|225860467|ref|YP_002741976.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae Taiwan19F-14]
gi|298229387|ref|ZP_06963068.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae str. Canada MDR_19F]
gi|298254595|ref|ZP_06978181.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae str. Canada MDR_19A]
gi|298502240|ref|YP_003724180.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae TCH8431/19A]
gi|303255934|ref|ZP_07341964.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae BS455]
gi|303259518|ref|ZP_07345495.1| acetolactate synthase small subunit [Streptococcus pneumoniae
SP-BS293]
gi|303262382|ref|ZP_07348325.1| acetolactate synthase small subunit [Streptococcus pneumoniae
SP14-BS292]
gi|303264798|ref|ZP_07350715.1| acetolactate synthase small subunit [Streptococcus pneumoniae
BS397]
gi|303267370|ref|ZP_07353228.1| acetolactate synthase small subunit [Streptococcus pneumoniae
BS457]
gi|303269688|ref|ZP_07355444.1| acetolactate synthase small subunit [Streptococcus pneumoniae
BS458]
gi|307067089|ref|YP_003876055.1| acetolactate synthase small subunit [Streptococcus pneumoniae
AP200]
gi|307710411|ref|ZP_07646850.1| acetolactate synthase, small subunit [Streptococcus mitis SK564]
gi|307711323|ref|ZP_07647743.1| acetolactate synthase, small subunit [Streptococcus mitis SK321]
gi|322377156|ref|ZP_08051648.1| acetolactate synthase, small subunit [Streptococcus sp. M334]
gi|14971915|gb|AAK74607.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
TIGR4]
gi|116076247|gb|ABJ53967.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
D39]
gi|147757422|gb|EDK64461.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae SP11-BS70]
gi|147758478|gb|EDK65477.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae SP14-BS69]
gi|147762195|gb|EDK69157.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae SP18-BS74]
gi|147763798|gb|EDK70732.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae SP19-BS75]
gi|147923986|gb|EDK75098.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae SP3-BS71]
gi|147926662|gb|EDK77735.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae SP6-BS73]
gi|147927576|gb|EDK78603.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae SP9-BS68]
gi|147929668|gb|EDK80660.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae SP23-BS72]
gi|168996943|gb|ACA37555.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
Hungary19A-6]
gi|172043862|gb|EDT51908.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
CDC1873-00]
gi|183571227|gb|EDT91755.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
CDC1087-00]
gi|183572922|gb|EDT93450.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
SP195]
gi|183577436|gb|EDT97964.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
MLV-016]
gi|194356609|gb|ACF55057.1| acetolactate synthase small subunit [Streptococcus pneumoniae
G54]
gi|220673768|emb|CAR68267.1| acetolactate synthase small subunit [Streptococcus pneumoniae
ATCC 700669]
gi|225721599|gb|ACO17453.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
70585]
gi|225723559|gb|ACO19412.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
JJA]
gi|225724984|gb|ACO20836.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
P1031]
gi|225728098|gb|ACO23949.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
Taiwan19F-14]
gi|298237835|gb|ADI68966.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae TCH8431/19A]
gi|301793682|emb|CBW36068.1| acetolactate synthase small subunit [Streptococcus pneumoniae
INV104]
gi|301799540|emb|CBW32089.1| acetolactate synthase small subunit [Streptococcus pneumoniae
OXC141]
gi|301801354|emb|CBW34038.1| acetolactate synthase small subunit [Streptococcus pneumoniae
INV200]
gi|302597109|gb|EFL64225.1| acetolactate synthase 3 regulatory subunit [Streptococcus
pneumoniae BS455]
gi|302636481|gb|EFL66973.1| acetolactate synthase small subunit [Streptococcus pneumoniae
SP14-BS292]
gi|302639452|gb|EFL69910.1| acetolactate synthase small subunit [Streptococcus pneumoniae
SP-BS293]
gi|302640785|gb|EFL71176.1| acetolactate synthase small subunit [Streptococcus pneumoniae
BS458]
gi|302643103|gb|EFL73392.1| acetolactate synthase small subunit [Streptococcus pneumoniae
BS457]
gi|302645665|gb|EFL75895.1| acetolactate synthase small subunit [Streptococcus pneumoniae
BS397]
gi|306408626|gb|ADM84053.1| Acetolactate synthase, small (regulatory) subunit [Streptococcus
pneumoniae AP200]
gi|307616839|gb|EFN96019.1| acetolactate synthase, small subunit [Streptococcus mitis SK321]
gi|307618823|gb|EFN97960.1| acetolactate synthase, small subunit [Streptococcus mitis SK564]
gi|321281869|gb|EFX58877.1| acetolactate synthase, small subunit [Streptococcus sp. M334]
gi|327390854|gb|EGE89194.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
GA04375]
gi|332075288|gb|EGI85758.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
GA17570]
gi|332077730|gb|EGI88191.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
GA41301]
Length = 158
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G ++ + + ID + + V + +
Sbjct: 4 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGATEDPNVSRITIIIDVASHDEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ ++
Sbjct: 64 QLNRQIDVIRIRDIT 78
>gi|307693023|ref|ZP_07635260.1| aspartate kinase [Ruminococcaceae bacterium D16]
Length = 408
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 32 DILGIVVFVGNILGEYGIN--IAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
D GI + ++L + IN I +GR +S + + + D +LE+
Sbjct: 271 DEPGIAFKIFSLLAKKNINVDIILQSIGRDESKDISFTVARGDSEEAQKILEE 323
>gi|289168655|ref|YP_003446924.1| acetolactate synthase, small subunit [Streptococcus mitis B6]
gi|288908222|emb|CBJ23064.1| acetolactate synthase, small subunit [Streptococcus mitis B6]
Length = 158
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G ++ + + ID + + V + +
Sbjct: 4 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGATEDPNVSRITIIIDVASHDEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ ++
Sbjct: 64 QLNRQIDVIRIRDIT 78
>gi|257463574|ref|ZP_05627966.1| hypothetical protein FuD12_06965 [Fusobacterium sp. D12]
gi|317061129|ref|ZP_07925614.1| chorismate mutase [Fusobacterium sp. D12]
gi|313686805|gb|EFS23640.1| chorismate mutase [Fusobacterium sp. D12]
Length = 159
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 24/70 (34%), Gaps = 6/70 (8%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-----NSVLEKLSV 85
D G++ + ++ + +NI + + + + G+ L K+
Sbjct: 87 QDRQGLLAKILEVIADDKMNILTI-VQNAAVDGIVQLTISLQGTAETPKNIEMTLSKIQK 145
Query: 86 NVTIRFVKQF 95
+R ++
Sbjct: 146 IDGVRDLRIL 155
>gi|257455327|ref|ZP_05620562.1| acetolactate synthase, small subunit [Enhydrobacter aerosaccus
SK60]
gi|257447289|gb|EEV22297.1| acetolactate synthase, small subunit [Enhydrobacter aerosaccus
SK60]
Length = 163
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
+I ++ + G + V + + G NI ++ + + L D V +
Sbjct: 3 HLISVLMENESGSLSRVVGLFSQRGYNIETLNVAPTDDPTLSRLTLTTDTDQNKIEQVTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + I V
Sbjct: 63 QLHKLIEIVKVTTLT 77
>gi|242620116|ref|YP_003002120.1| acetolactate synthase small subunit [Aureococcus anophagefferens]
gi|239997361|gb|ACS36884.1| acetolactate synthase small subunit [Aureococcus anophagefferens]
Length = 168
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ + G++ + + G NI +G ++ + + + + D + + +
Sbjct: 3 HTLSVLVENESGVLTRIAGLFARRGFNIESLSVGPAEQKDISRITMVVPGDDRTIEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L + +R V+
Sbjct: 63 QLYKLINVRKVQDIT 77
>gi|229013870|ref|ZP_04170998.1| Acetoin utilization protein AcuB [Bacillus mycoides DSM 2048]
gi|228747539|gb|EEL97414.1| Acetoin utilization protein AcuB [Bacillus mycoides DSM 2048]
Length = 214
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I + INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSDLQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|73662696|ref|YP_301477.1| prephenate dehydrogenase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123642546|sp|Q49XG5|TYRA_STAS1 RecName: Full=Prephenate dehydrogenase; Short=PDH
gi|72495211|dbj|BAE18532.1| prephenate dehydrogenase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 363
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHL 56
+ + D G++ V NIL + I+I++ +
Sbjct: 297 LYVDIPDKPGMISKVTNILSLHNISISNLRI 327
>gi|33597954|ref|NP_885597.1| acetolactate synthase 3 regulatory subunit [Bordetella
parapertussis 12822]
gi|33574383|emb|CAE38721.1| acetolactate synthase small subunit [Bordetella parapertussis]
Length = 163
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+I ++ + G + V + G NI + ++ + +S L + + V+E++
Sbjct: 3 HVISVLMENEPGALSRVVGLFSARGYNIETLTVAPTE--DATLSRLTVVTVGSDEVIEQI 60
Query: 84 SVN 86
+ +
Sbjct: 61 TKH 63
>gi|30022736|ref|NP_834367.1| acetoin utilization protein AcuB [Bacillus cereus ATCC 14579]
gi|75760727|ref|ZP_00740750.1| Acetoin utilization acuB protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|206969647|ref|ZP_03230601.1| acetoin utilization protein AcuB [Bacillus cereus AH1134]
gi|218232240|ref|YP_002369463.1| acetoin utilization protein AcuB [Bacillus cereus B4264]
gi|218899819|ref|YP_002448230.1| acetoin utilization protein AcuB [Bacillus cereus G9842]
gi|228903181|ref|ZP_04067315.1| Acetoin utilization protein AcuB [Bacillus thuringiensis IBL 4222]
gi|228910518|ref|ZP_04074332.1| Acetoin utilization protein AcuB [Bacillus thuringiensis IBL 200]
gi|228923421|ref|ZP_04086708.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228941845|ref|ZP_04104392.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228960935|ref|ZP_04122568.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228974770|ref|ZP_04135336.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981365|ref|ZP_04141665.1| Acetoin utilization protein AcuB [Bacillus thuringiensis Bt407]
gi|229048372|ref|ZP_04193940.1| Acetoin utilization protein AcuB [Bacillus cereus AH676]
gi|229072171|ref|ZP_04205379.1| Acetoin utilization protein AcuB [Bacillus cereus F65185]
gi|229081923|ref|ZP_04214415.1| Acetoin utilization protein AcuB [Bacillus cereus Rock4-2]
gi|229112131|ref|ZP_04241674.1| Acetoin utilization protein AcuB [Bacillus cereus Rock1-15]
gi|229129946|ref|ZP_04258912.1| Acetoin utilization protein AcuB [Bacillus cereus BDRD-Cer4]
gi|229147232|ref|ZP_04275589.1| Acetoin utilization protein AcuB [Bacillus cereus BDRD-ST24]
gi|229152865|ref|ZP_04281048.1| Acetoin utilization protein AcuB [Bacillus cereus m1550]
gi|296505133|ref|YP_003666833.1| acetoin utilization protein AcuB [Bacillus thuringiensis BMB171]
gi|29898295|gb|AAP11568.1| Acetoin utilization acuB protein [Bacillus cereus ATCC 14579]
gi|74491782|gb|EAO54975.1| Acetoin utilization acuB protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|206735335|gb|EDZ52503.1| acetoin utilization protein AcuB [Bacillus cereus AH1134]
gi|218160197|gb|ACK60189.1| acetoin utilization protein AcuB [Bacillus cereus B4264]
gi|218542514|gb|ACK94908.1| acetoin utilization protein AcuB [Bacillus cereus G9842]
gi|228630685|gb|EEK87331.1| Acetoin utilization protein AcuB [Bacillus cereus m1550]
gi|228636241|gb|EEK92714.1| Acetoin utilization protein AcuB [Bacillus cereus BDRD-ST24]
gi|228653637|gb|EEL09509.1| Acetoin utilization protein AcuB [Bacillus cereus BDRD-Cer4]
gi|228671454|gb|EEL26755.1| Acetoin utilization protein AcuB [Bacillus cereus Rock1-15]
gi|228701511|gb|EEL54005.1| Acetoin utilization protein AcuB [Bacillus cereus Rock4-2]
gi|228710909|gb|EEL62876.1| Acetoin utilization protein AcuB [Bacillus cereus F65185]
gi|228723097|gb|EEL74474.1| Acetoin utilization protein AcuB [Bacillus cereus AH676]
gi|228778565|gb|EEM26832.1| Acetoin utilization protein AcuB [Bacillus thuringiensis Bt407]
gi|228785173|gb|EEM33186.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228798831|gb|EEM45811.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228818057|gb|EEM64135.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228836242|gb|EEM81596.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228849082|gb|EEM93922.1| Acetoin utilization protein AcuB [Bacillus thuringiensis IBL 200]
gi|228856463|gb|EEN00989.1| Acetoin utilization protein AcuB [Bacillus thuringiensis IBL 4222]
gi|296326185|gb|ADH09113.1| acetoin utilization protein AcuB [Bacillus thuringiensis BMB171]
gi|326942451|gb|AEA18347.1| acetoin utilization protein AcuB [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 214
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I + INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSDLQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|310641621|ref|YP_003946379.1| amino acid-binding act domain protein [Paenibacillus polymyxa
SC2]
gi|309246571|gb|ADO56138.1| Amino acid-binding ACT domain protein [Paenibacillus polymyxa
SC2]
Length = 257
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 5/69 (7%)
Query: 29 VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL-EKLSVNV 87
++ + G++ + ++LG G+NI + + L D +L + L
Sbjct: 14 IHKNRPGLLGDIASMLGILGVNILTINGVEGERRG---MLLETDDDEKIRILGDTLKKAS 70
Query: 88 TIRFVKQFE 96
I V
Sbjct: 71 NIT-VTALR 78
>gi|302520180|ref|ZP_07272522.1| aspartate kinase, monofunctional class [Streptomyces sp. SPB78]
gi|318058440|ref|ZP_07977163.1| aspartate kinase [Streptomyces sp. SA3_actG]
gi|318079576|ref|ZP_07986908.1| aspartate kinase [Streptomyces sp. SA3_actF]
gi|302429075|gb|EFL00891.1| aspartate kinase, monofunctional class [Streptomyces sp. SPB78]
Length = 422
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 5/69 (7%), Positives = 18/69 (26%), Gaps = 3/69 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKLSVNVTI 89
D G + + +NI + + ++ + ++ L
Sbjct: 274 DKPGEAAAIFRAIAGAEVNI-DMVVQNVSAASTGLTDISFTLPKSEGRKAIDALEKLKAT 332
Query: 90 RFVKQFEFN 98
+ ++
Sbjct: 333 VAFESLRYD 341
>gi|242310249|ref|ZP_04809404.1| homoserine dehydrogenase [Helicobacter pullorum MIT 98-5489]
gi|239523546|gb|EEQ63412.1| homoserine dehydrogenase [Helicobacter pullorum MIT 98-5489]
Length = 414
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF----LCIDGSILNSVLEKLSVNV 87
D G++ + ILGE I+I F +S + ++ +C + I + LEK++
Sbjct: 342 DKPGVLAQITTILGEEEISIDTFLQRKSNNKNCSVLLLSTHICTESKI-QTALEKINNLE 400
Query: 88 TIRFVKQFEFNVD 100
I K ++
Sbjct: 401 -ITQEKPIMIRIE 412
>gi|258405262|ref|YP_003198004.1| amino acid-binding ACT domain-containing protein [Desulfohalobium
retbaense DSM 5692]
gi|257797489|gb|ACV68426.1| amino acid-binding ACT domain protein [Desulfohalobium retbaense
DSM 5692]
Length = 143
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVN 86
D G + + ++L IN+ + + QS ++A+ D + ++ L +
Sbjct: 77 DDQPGGLHKILDLLTSNSINVEYMYAFVQQSGKNAVLIFRFDR--TDQAIDVLQEH 130
>gi|124022597|ref|YP_001016904.1| homoserine dehydrogenase [Prochlorococcus marinus str. MIT 9303]
gi|123962883|gb|ABM77639.1| Homoserine dehydrogenase:ACT domain [Prochlorococcus marinus str.
MIT 9303]
Length = 438
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSV 85
D G++ +G+ G+ I+I + I + I + L ++
Sbjct: 365 FNAEDTPGVIGRIGSCFGDRAISIQSIVQFDASDAGAEIVVITHEISQGQMQDALTAITS 424
Query: 86 NVTIR 90
++
Sbjct: 425 MAEVK 429
>gi|150016427|ref|YP_001308681.1| homoserine dehydrogenase [Clostridium beijerinckii NCIMB 8052]
gi|149902892|gb|ABR33725.1| Homoserine dehydrogenase [Clostridium beijerinckii NCIMB 8052]
Length = 431
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 9/70 (12%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--------CIDGSILNSV-LEK 82
D G++ + ILG++ ++I + L IDG++ L+
Sbjct: 358 DESGVLGEITAILGKHNVSIRSVIQKGDEEDGQVTIVLVTHRTSEAQIDGAVEEITSLKS 417
Query: 83 LSVNVTIRFV 92
+ I +
Sbjct: 418 VYKIDNIIRI 427
>gi|302338120|ref|YP_003803326.1| acetolactate synthase, small subunit [Spirochaeta smaragdinae DSM
11293]
gi|301635305|gb|ADK80732.1| acetolactate synthase, small subunit [Spirochaeta smaragdinae DSM
11293]
Length = 169
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ + G++ + +++ G NI G ++ + + + D + + +
Sbjct: 9 HTISVLVNNHPGVLSKLTSLITRRGFNIESIAAGPTKDPDMFRLTIIVKGDDQSVEQIQK 68
Query: 82 KLSVNVTIRFVKQF 95
+L V V
Sbjct: 69 QLYKIVDTVKVSPI 82
>gi|291550625|emb|CBL26887.1| homoserine dehydrogenase [Ruminococcus torques L2-14]
Length = 425
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL--CIDGSILNSVLEKLSVNVTI 89
+ G++ V + G + ++I +Q + + + + + LE+L +I
Sbjct: 356 NEPGVLAAVAEVFGNHKVSITRVVQEHTQPHQAELVIVTESVKEKYMKQALEELLALPSI 415
Query: 90 RFVKQF 95
V
Sbjct: 416 LEVSSI 421
>gi|291458831|ref|ZP_06598221.1| GTP diphosphokinase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291418085|gb|EFE91804.1| GTP diphosphokinase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 753
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEKLSVNV 87
+ +G +V + +L + I+I R E A + D ++ KL
Sbjct: 685 NNRVGQIVDITKLLADANIDIKALS-SRVGKNEKATITVSFDIHNKEELAALIGKLRKIN 743
Query: 88 TIRFV 92
+ +
Sbjct: 744 GVLDI 748
>gi|271963176|ref|YP_003337372.1| homoserine dehydrogenase [Streptosporangium roseum DSM 43021]
gi|270506351|gb|ACZ84629.1| Homoserine dehydrogenase [Streptosporangium roseum DSM 43021]
Length = 430
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV---LEKLSVNVT 88
D G++ V ++ + ++I + + + A L + ++ +E L
Sbjct: 357 DKPGVLARVADMFAKQDVSI--QTVRQEGHGDDAQLVLVTHRASDAALSATIESLREMDI 414
Query: 89 IRFV 92
+R V
Sbjct: 415 VRDV 418
>gi|225018443|ref|ZP_03707635.1| hypothetical protein CLOSTMETH_02390 [Clostridium methylpentosum
DSM 5476]
gi|224948785|gb|EEG29994.1| hypothetical protein CLOSTMETH_02390 [Clostridium methylpentosum
DSM 5476]
Length = 144
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSIL-NSVLE 81
+ + +D G++ V L G N+ + ++ +S + D ++E
Sbjct: 71 TLGLRLSDEPGVLSSVLTELYRNGANLLTVNQNIPNDGIANVTVSVIIGDSVAGVEEMIE 130
Query: 82 KLSVNVTIRFVKQF 95
LS + K
Sbjct: 131 ALSTIHGVIESKTI 144
>gi|50289069|ref|XP_446964.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526273|emb|CAG59897.1| unnamed protein product [Candida glabrata]
Length = 300
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 6/71 (8%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ + + G++ + L G NI + ++ + + + + ++
Sbjct: 71 HVLNCLVQNEPGVLSRISGTLAARGFNIDSLVVCNTEVKDLSRMTIVLKGQDGVIEQARR 130
Query: 82 KLSVNVTIRFV 92
++ + + V
Sbjct: 131 QIEDLIPVYAV 141
>gi|330501606|ref|YP_004378475.1| phosphoserine phosphatase [Pseudomonas mendocina NK-01]
gi|328915892|gb|AEB56723.1| phosphoserine phosphatase [Pseudomonas mendocina NK-01]
Length = 404
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKL 83
+I I D G+ + +L + G+NI T + I D SVL+ L
Sbjct: 6 LINITGEDRPGLTAAITGVLAQGGVNILDIGQAVIHDTLSFGILIEIPDNGRSQSVLKDL 65
>gi|323702158|ref|ZP_08113825.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum nigrificans DSM
574]
gi|323532845|gb|EGB22717.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum nigrificans DSM
574]
Length = 723
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 37/95 (38%), Gaps = 10/95 (10%)
Query: 8 RFIKI---QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH 64
R +++ ++ + + + D G + V N+L + IN A + R++ +
Sbjct: 631 RVVEVAWDKDFQSPFQVK---LEVTGMDRPGFLNDVLNVLMDLKIN-ASWVNARTRKDQI 686
Query: 65 AISFLCIDGSILNS---VLEKLSVNVTIRFVKQFE 96
A L + ++ K++ + V++
Sbjct: 687 ATVGLAMQVRNTEQLEYLINKINKVKDVYGVRRVS 721
>gi|241760510|ref|ZP_04758603.1| homoserine dehydrogenase [Neisseria flavescens SK114]
gi|241319014|gb|EER55516.1| homoserine dehydrogenase [Neisseria flavescens SK114]
Length = 435
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 6/73 (8%), Positives = 23/73 (31%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D + + D G + + +L + ++I + A + ++
Sbjct: 345 PMDEITSSYYLRVQATDEPGTLGQIAALLAKENVSIEALIQKGVINQSTAEIVILTHTTV 404
Query: 76 LNSVLEKLSVNVT 88
+++ ++
Sbjct: 405 EHNIKRAIAAIEA 417
>gi|229824970|ref|ZP_04451039.1| hypothetical protein GCWU000182_00319 [Abiotrophia defectiva ATCC
49176]
gi|229790973|gb|EEP27087.1| hypothetical protein GCWU000182_00319 [Abiotrophia defectiva ATCC
49176]
Length = 363
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEK 82
I + D G + + +IL GI+I + + ++ + + D + +
Sbjct: 294 HEILLYVPDEPGSIAIMASILAAKGISIKNMGIAHTREFLDGVLRIEFYDSHSKEAAIVA 353
Query: 83 LSV 85
+
Sbjct: 354 IKE 356
>gi|149187090|ref|ZP_01865395.1| homoserine dehydrogenase [Erythrobacter sp. SD-21]
gi|148829242|gb|EDL47688.1| homoserine dehydrogenase [Erythrobacter sp. SD-21]
Length = 435
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 8/65 (12%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Query: 32 DILGIVVFVGNILGEYGINIAH-FHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D G++ + + + G++I GR + + V + L +
Sbjct: 362 DRPGVLAEITAAMRDAGVSIESLIQRGRDTEGGDVAVAMVTHEGPEHCVGKALDLLEGSA 421
Query: 91 FVKQF 95
+
Sbjct: 422 SLTAL 426
>gi|148273157|ref|YP_001222718.1| prephenate dehydrogenase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831087|emb|CAN02032.1| putative prephenate dehydrogenase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 358
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 25/60 (41%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ ++ D G + + + +G +NI L SQ + + + + + ++ +L
Sbjct: 292 VTVMIDDRPGQLAALIDDVGAADVNIEDLRLEHSQGAQVGLVEIAVLPEARDRLVARLEE 351
>gi|51210010|ref|YP_063674.1| acetohydroxyacid synthase small subunit [Gracilaria
tenuistipitata var. liui]
gi|50657764|gb|AAT79749.1| acetolactate synthase small subunit [Gracilaria tenuistipitata
var. liui]
Length = 175
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + D + + +
Sbjct: 3 HTLSVLVEDEAGVLSRIAGLFARRGFNIESLAVGPAEKIGISRITMIVNGDNRTIEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L V I V+
Sbjct: 63 QLYKLVNILEVQDIT 77
>gi|77920126|ref|YP_357941.1| glycine cleavage system regulatory protein [Pelobacter carbinolicus
DSM 2380]
gi|77546209|gb|ABA89771.1| glycine cleavage system regulatory protein [Pelobacter carbinolicus
DSM 2380]
Length = 179
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-- 76
+D MI + +D GIV V LG+ INI + S ++ + + I+ +
Sbjct: 89 LDGELCMISVYGSDKPGIVYPVVKELGDRQINITDLNTKLVGSKQNPVYVMMIEAVLPVG 148
Query: 77 ------NSVLEKLSVNVTI-RFVKQFE 96
++VL +L ++ I V+
Sbjct: 149 LEVEQLSTVLNRLKQDLQIDISVRSIT 175
>gi|154482845|ref|ZP_02025293.1| hypothetical protein EUBVEN_00541 [Eubacterium ventriosum ATCC
27560]
gi|149736273|gb|EDM52159.1| hypothetical protein EUBVEN_00541 [Eubacterium ventriosum ATCC
27560]
Length = 145
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 6/75 (8%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVL--- 80
I + + G + N L E+ I++ F + S +D L
Sbjct: 4 HQISVFIENKPGNIANFTNFLAEHKIDMRAFQIADSSDFGIIRII--VDDPFNTLTLLRD 61
Query: 81 -EKLSVNVTIRFVKQ 94
+ + + VK
Sbjct: 62 NDWICNLTHVIGVKL 76
>gi|11467656|ref|NP_050708.1| acetohydroxyacid synthase small subunit [Guillardia theta]
gi|6016366|sp|O78451|ILVH_GUITH RecName: Full=Acetolactate synthase small subunit; AltName:
Full=Acetohydroxy-acid synthase small subunit;
Short=AHAS; Short=ALS
gi|3602981|gb|AAC35642.1| acetohydroxyacid synthetase small subunit [Guillardia theta]
Length = 169
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NI +G ++ + + + D + + +
Sbjct: 3 HTLSVLVEDESGVLTRIAGLFARRGFNIESLAVGPTEKLGISRITMVVPSDERTIEQLTK 62
Query: 82 KLSVNVTIRFV 92
+L V I V
Sbjct: 63 QLYKLVNILKV 73
>gi|226323906|ref|ZP_03799424.1| hypothetical protein COPCOM_01681 [Coprococcus comes ATCC 27758]
gi|225207455|gb|EEG89809.1| hypothetical protein COPCOM_01681 [Coprococcus comes ATCC 27758]
Length = 272
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 10/82 (12%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Query: 18 DVDIGRLMICIVNA--DILGIVVFVGNILGEYGINIAH--FHLGRSQSTEHAISFLCIDG 73
+ + I + G++ + + G++ ++I ++ E I +
Sbjct: 187 EFADVKNRFFIRMQVSNEPGVLAAIAKVFGDHKVSIERVIQEQAKAAKAELVIGTSAVKE 246
Query: 74 SILNSVLEKLSVNVTIRFVKQF 95
L LE+L + +
Sbjct: 247 YHLQDALEELKEMPIVSEISSI 268
>gi|221067094|ref|ZP_03543199.1| heavy metal translocating P-type ATPase [Comamonas testosteroni
KF-1]
gi|220712117|gb|EED67485.1| heavy metal translocating P-type ATPase [Comamonas testosteroni
KF-1]
Length = 975
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 8/95 (8%)
Query: 8 RFIKIQEI-NFDVDIGRLMI-CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
R I I D ++ + + + + L + G+ + G + A
Sbjct: 213 RLGAINGIERLDFNLMGRRLDVLHHLPDP---APILKALNDVGMKASIERSGDTAPQGQA 269
Query: 66 ISFLC-IDGSILNSVLEKLSVNVTIRFVKQFEFNV 99
I + +D +L K + VK FN+
Sbjct: 270 IYLIEKMDCPTEEGLLRK--ALEGMPGVKALNFNL 302
>gi|56964545|ref|YP_176276.1| formyltetrahydrofolate deformylase [Bacillus clausii KSM-K16]
gi|56910788|dbj|BAD65315.1| formyltetrahydrofolate hydrolase [Bacillus clausii KSM-K16]
Length = 287
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 6/62 (9%), Positives = 16/62 (25%), Gaps = 1/62 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI-AHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ + D G+V + + L + NI + + ++
Sbjct: 9 RLLVSCQDRPGVVANISSFLYNHEANIVQSDQYSTDPEGGMFFMRIEFAWQEEKTAFSEI 68
Query: 84 SV 85
Sbjct: 69 KQ 70
>gi|319652410|ref|ZP_08006526.1| YkkE protein [Bacillus sp. 2_A_57_CT2]
gi|317395872|gb|EFV76594.1| YkkE protein [Bacillus sp. 2_A_57_CT2]
Length = 299
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGIN-IAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
+ I D GIV V L ++ N I + + + L S E+L
Sbjct: 21 RLLINCPDQPGIVAAVSKFLFQHDANIIESSQYSTNPEGGTFFIRIEFECPGLQSKEEEL 80
Query: 84 SV 85
Sbjct: 81 KS 82
>gi|326780195|ref|ZP_08239460.1| Prephenate dehydrogenase [Streptomyces cf. griseus XylebKG-1]
gi|326660528|gb|EGE45374.1| Prephenate dehydrogenase [Streptomyces cf. griseus XylebKG-1]
Length = 361
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 26/76 (34%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+++ + + ++ D G + + G G+NI + + + + +
Sbjct: 279 VRVPGKHGAAPAAYETVAVLIGDKPGELAAIFADAGRAGVNIEDVRIEHATGQQAGLVQI 338
Query: 70 CIDGSILNSVLEKLSV 85
++ S + L
Sbjct: 339 MVEPSAAPVLGAALQE 354
>gi|253582374|ref|ZP_04859597.1| chorismate mutase [Fusobacterium varium ATCC 27725]
gi|257468599|ref|ZP_05632693.1| hypothetical protein FulcA4_04609 [Fusobacterium ulcerans ATCC
49185]
gi|317062855|ref|ZP_07927340.1| chorismate mutase [Fusobacterium ulcerans ATCC 49185]
gi|251835913|gb|EES64451.1| chorismate mutase [Fusobacterium varium ATCC 27725]
gi|313688531|gb|EFS25366.1| chorismate mutase [Fusobacterium ulcerans ATCC 49185]
Length = 149
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 6/69 (8%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-----NSVLEKLSVN 86
D GI+ V I+ +NI + A S + + + +LE++S
Sbjct: 79 DKPGILAKVLEIIATEDMNILTI-IQNIAIDGIAKSTISLQTTENMLRKIEGMLERISEV 137
Query: 87 VTIRFVKQF 95
++ ++
Sbjct: 138 DGVKDLRII 146
>gi|212696222|ref|ZP_03304350.1| hypothetical protein ANHYDRO_00758 [Anaerococcus hydrogenalis DSM
7454]
gi|212676851|gb|EEB36458.1| hypothetical protein ANHYDRO_00758 [Anaerococcus hydrogenalis DSM
7454]
Length = 726
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 26/69 (37%), Gaps = 7/69 (10%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV------LEKLS 84
D GI+ + ++ ++I ++ RS + L + + L+ +
Sbjct: 658 KDGTGIIFEITKLISAENVSIEAMNV-RSNENHEGVIDLTVSVPNTEKLNELIMKLKTIK 716
Query: 85 VNVTIRFVK 93
+ +I VK
Sbjct: 717 MIESIYRVK 725
>gi|182439531|ref|YP_001827250.1| prephenate dehydrogenase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178468047|dbj|BAG22567.1| putative prephenate dehydrogenase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 361
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 26/76 (34%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+++ + + ++ D G + + G G+NI + + + + +
Sbjct: 279 VRVPGKHGAAPAAYETVAVLIGDKPGELAAIFADAGRAGVNIEDVRIEHATGQQAGLVQI 338
Query: 70 CIDGSILNSVLEKLSV 85
++ S + L
Sbjct: 339 MVEPSAAPVLGAALQE 354
>gi|157373475|ref|YP_001472075.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Shewanella
sediminis HAW-EB3]
gi|157315849|gb|ABV34947.1| GTP diphosphokinase [Shewanella sediminis HAW-EB3]
Length = 701
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF-LCI---DGSILNSVLE 81
+ + + G + + +I+ G NI + L + L + D L +V+
Sbjct: 629 LRVEIVNHQGALAKITSIVAAEGANIHN--LSTEERDGRVFLINLRVSVRDRIHLANVMR 686
Query: 82 KLSVNVTIRF 91
++ V +
Sbjct: 687 RIRVLPEVLR 696
>gi|126733215|ref|ZP_01748962.1| homoserine dehydrogenase [Roseobacter sp. CCS2]
gi|126716081|gb|EBA12945.1| homoserine dehydrogenase [Roseobacter sp. CCS2]
Length = 428
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEK 82
D G + V + LGE GI+I + + A L + + LE+
Sbjct: 356 IDKPGALAKVAHALGEAGISIDRMR--QYGHEDTAAPVLIVTHKTTRTALEE 405
>gi|20092650|ref|NP_618725.1| acetolactate synthase, small subunit [Methanosarcina acetivorans
C2A]
gi|19917932|gb|AAM07205.1| acetolactate synthase, small subunit [Methanosarcina acetivorans
C2A]
Length = 145
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINI--AHFHLGRSQSTEHAISFLCIDGSI 75
++ I D+ G + + + G IN+ A+ + R Q + ID +I
Sbjct: 71 ETSVLGIEMEDVPGSMSRIAEVFGAANINLDYAYAFVTRDQKALLIVRVNEIDRAI 126
>gi|326331195|ref|ZP_08197490.1| putative glycine cleavage system transcriptional repressor
[Nocardioidaceae bacterium Broad-1]
gi|325951016|gb|EGD43061.1| putative glycine cleavage system transcriptional repressor
[Nocardioidaceae bacterium Broad-1]
Length = 172
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I ++ D GI+ L G+N+ + R A++ LC + ++ L
Sbjct: 4 HAITVLGHDRPGIIADTTARLAGLGLNLEDSTMTRL-RGHFAMTLLCAGEATTEAIRADL 62
Query: 84 SVN--VTIRFVKQ 94
V
Sbjct: 63 EPIASDGTLTVTV 75
>gi|262379928|ref|ZP_06073083.1| homoserine dehydrogenase [Acinetobacter radioresistens SH164]
gi|262298122|gb|EEY86036.1| homoserine dehydrogenase [Acinetobacter radioresistens SH164]
Length = 438
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
I + D G++ + IL GI+I I + I S ++ L
Sbjct: 356 GYYIRVDAEDQTGVLADITTILSRDGISIDAIMQQPRLKDIIPIVIMTDPIVESKMDEAL 415
Query: 81 EKLSVNVTIR 90
K+ +R
Sbjct: 416 AKIQALSAVR 425
>gi|237739493|ref|ZP_04569974.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 2_1_31]
gi|229423101|gb|EEO38148.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 2_1_31]
Length = 725
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 7/91 (7%)
Query: 9 FIKIQEINFDVDIGRLMICIVN--ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
+K E + + + D I++ + N++G + INI + + +
Sbjct: 633 LVKWDENLIETKLNKYNFTFTIVLNDRPNILMEIVNLIGNHKINITSLNSYEVKKDGDKV 692
Query: 67 SFLCIDGSIL-----NSVLEKLSVNVTIRFV 92
+ I I + ++ + + V
Sbjct: 693 MKVKISVEIKGKAEYDYLINNILKLKDVIAV 723
>gi|227874937|ref|ZP_03993088.1| acetolactate synthase [Mobiluncus mulieris ATCC 35243]
gi|269976460|ref|ZP_06183445.1| acetolactate synthase, small subunit [Mobiluncus mulieris 28-1]
gi|306818262|ref|ZP_07451991.1| acetolactate synthase small subunit [Mobiluncus mulieris ATCC
35239]
gi|307701836|ref|ZP_07638850.1| acetolactate synthase, small subunit [Mobiluncus mulieris
FB024-16]
gi|227844457|gb|EEJ54615.1| acetolactate synthase [Mobiluncus mulieris ATCC 35243]
gi|269935261|gb|EEZ91810.1| acetolactate synthase, small subunit [Mobiluncus mulieris 28-1]
gi|304648907|gb|EFM46203.1| acetolactate synthase small subunit [Mobiluncus mulieris ATCC
35239]
gi|307613094|gb|EFN92349.1| acetolactate synthase, small subunit [Mobiluncus mulieris
FB024-16]
Length = 193
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID-GSIL-NSVLEKLSVNVT 88
+ G++ V + NI +++ E + + +D + V ++L
Sbjct: 12 ENKPGVLARVAALFARRAFNITSLSGAPTENPEFSQILIVVDVSEVPLEQVKKQLHKLGN 71
Query: 89 IRFVKQFE 96
+ + + E
Sbjct: 72 VLKIVEVE 79
>gi|159041515|ref|YP_001540767.1| threonine dehydratase [Caldivirga maquilingensis IC-167]
gi|157920350|gb|ABW01777.1| threonine dehydratase [Caldivirga maquilingensis IC-167]
Length = 418
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ---STEHAISFLCIDGSILNSVLE 81
M+ + D G++ V +LG G+NI R + + ++ ++
Sbjct: 341 MLKGLIPDRPGMLAQVTGVLGRLGVNIVEIRHERYNPLIRPNYTEVDVIVETPPEEGAVD 400
Query: 82 KL 83
++
Sbjct: 401 RV 402
>gi|2065480|gb|AAB53489.1| acetohydroxyacid synthase small subunit [Methanococcus aeolicus]
Length = 169
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSV 79
+I ++ + G++ + + NI+ G + ST+ + + + D ++ V
Sbjct: 3 NTHIISVLVLNKPGVLQRISGLFTRRWYNISSITGGSTDSTDISRMTIVVKGDDKVVEQV 62
Query: 80 LEKLSVNVTIRFV 92
+++L+ + + V
Sbjct: 63 VKQLNKLIEVIKV 75
>gi|326800392|ref|YP_004318211.1| (p)ppGpp synthetase I, SpoT/RelA [Sphingobacterium sp. 21]
gi|326551156|gb|ADZ79541.1| (p)ppGpp synthetase I, SpoT/RelA [Sphingobacterium sp. 21]
Length = 737
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 26 ICIVNADILGIVVFVGNILG-EYGINIAHFHLGRSQSTEHAISFLCIDG-SILNSVLEKL 83
+ IV D +G+V + ++ ++ INI + +Q + ++ L+S+++KL
Sbjct: 662 LRIVGIDDVGLVNRITTVISQDFKINIRSITITSNQGIFEGSIMVYVNNTEHLDSLIKKL 721
Query: 84 SVNVTIR 90
I
Sbjct: 722 KQIKGIT 728
>gi|322382322|ref|ZP_08056229.1| hypothetical protein PL1_2602 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321153675|gb|EFX46050.1| hypothetical protein PL1_2602 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 254
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 29 VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
++ + G++ + +++G INI + ++ + D + + + L
Sbjct: 12 IHKNRPGLLGDIASLMGMLDINIVTINGVEDRTRGMLLQ--TNDDEKIELMGKMLKKVDN 69
Query: 89 IR 90
I
Sbjct: 70 IT 71
>gi|229180985|ref|ZP_04308320.1| Acetoin utilization protein AcuB [Bacillus cereus 172560W]
gi|228602542|gb|EEK60028.1| Acetoin utilization protein AcuB [Bacillus cereus 172560W]
Length = 214
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I + INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSDLQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|168700734|ref|ZP_02733011.1| probable acetolactate synthase small subunit [Gemmata
obscuriglobus UQM 2246]
Length = 168
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ + + G++ V +L G NI +G +++ + + D +L+ V +
Sbjct: 3 HVLSALVQNQPGVLATVAGMLHSRGFNIDSLAVGETETHNLSRMTFVVHGDDQVLDQVRK 62
Query: 82 KLSVNVTIRFV 92
+L VT+ V
Sbjct: 63 QLDKIVTVVRV 73
>gi|148255374|ref|YP_001239959.1| threonine dehydratase [Bradyrhizobium sp. BTAi1]
gi|146407547|gb|ABQ36053.1| L-threonine ammonia-lyase [Bradyrhizobium sp. BTAi1]
Length = 412
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 6/66 (9%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRS-----QSTEHAISFLCI-DGSILNSV 79
+ I D G + V ++LG+ G NI R+ + D + LN V
Sbjct: 339 LTIDIVDRPGQLAAVSSLLGDAGANIIEVSHQRTFSVLPAKATLLELVIETRDQAHLNDV 398
Query: 80 LEKLSV 85
+ KL+
Sbjct: 399 MAKLAA 404
>gi|111657901|ref|ZP_01408612.1| hypothetical protein SpneT_02000910 [Streptococcus pneumoniae
TIGR4]
gi|183603755|ref|ZP_02719192.2| acetolactate synthase, small subunit [Streptococcus pneumoniae
CDC3059-06]
gi|307126660|ref|YP_003878691.1| acetolactate synthase small subunit [Streptococcus pneumoniae
670-6B]
gi|307703998|ref|ZP_07640932.1| acetolactate synthase, small subunit [Streptococcus mitis SK597]
gi|183575097|gb|EDT95625.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
CDC3059-06]
gi|306483722|gb|ADM90591.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
670-6B]
gi|307622464|gb|EFO01467.1| acetolactate synthase, small subunit [Streptococcus mitis SK597]
gi|332076890|gb|EGI87352.1| acetolactate synthase, small subunit [Streptococcus pneumoniae
GA17545]
Length = 155
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G ++ + + ID + + V + +
Sbjct: 1 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGATEDPNVSRITIIIDVASHDEVEQIIK 60
Query: 85 VNV---TIRFVKQFE 96
+ ++
Sbjct: 61 QLNRQIDVIRIRDIT 75
>gi|303243711|ref|ZP_07330052.1| ACT domain-containing protein [Methanothermococcus okinawensis
IH1]
gi|302485953|gb|EFL48876.1| ACT domain-containing protein [Methanothermococcus okinawensis
IH1]
Length = 90
Score = 33.9 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 27/77 (35%), Gaps = 2/77 (2%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSV 79
+ R +I + D GIV + N L E +NI I + I + V
Sbjct: 1 MERAVITVTGKDRTGIVAKIANALAESNVNILDIRQSIMDGLFTMIMLVDISESKESFEV 60
Query: 80 LE-KLSVNVTIRFVKQF 95
LE KL VK
Sbjct: 61 LEQKLEKIGNEIGVKVI 77
>gi|255320982|ref|ZP_05362155.1| homoserine dehydrogenase [Acinetobacter radioresistens SK82]
gi|255301946|gb|EET81190.1| homoserine dehydrogenase [Acinetobacter radioresistens SK82]
Length = 434
Score = 33.9 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC--IDGSILNSVL 80
I + D G++ + IL GI+I I + I S ++ L
Sbjct: 352 GYYIRVDAEDQTGVLADITTILSRDGISIDAIMQQPRLKDIIPIVIMTDPIVESKMDEAL 411
Query: 81 EKLSVNVTIR 90
K+ +R
Sbjct: 412 AKIQALSAVR 421
>gi|229099145|ref|ZP_04230079.1| Acetoin utilization protein AcuB [Bacillus cereus Rock3-29]
gi|228684373|gb|EEL38317.1| Acetoin utilization protein AcuB [Bacillus cereus Rock3-29]
Length = 214
Score = 33.9 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I + INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSDLQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|148643165|ref|YP_001273678.1| NCAIR mutase related protein, PurE [Methanobrevibacter smithii ATCC
35061]
gi|261350041|ref|ZP_05975458.1| phosphoribosylaminoimidazole carboxylase [Methanobrevibacter
smithii DSM 2374]
gi|148552182|gb|ABQ87310.1| NCAIR mutase related protein, PurE [Methanobrevibacter smithii ATCC
35061]
gi|288860827|gb|EFC93125.1| phosphoribosylaminoimidazole carboxylase [Methanobrevibacter
smithii DSM 2374]
Length = 253
Score = 33.9 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Query: 14 EINFDVDIGRLMICIVNADILGIVVFVGNIL-GEYGINIAHFHLGRSQSTE 63
D + ++ I N ++ + VG I G INIA +
Sbjct: 97 GFELDYNKRAQILVIRNREVPKTLGKVGIITAGTSDINIAEEARVIVEEGG 147
>gi|255325005|ref|ZP_05366111.1| ACT domain protein [Corynebacterium tuberculostearicum SK141]
gi|311739465|ref|ZP_07713300.1| ACT domain protein [Corynebacterium pseudogenitalium ATCC 33035]
gi|255297570|gb|EET76881.1| ACT domain protein [Corynebacterium tuberculostearicum SK141]
gi|311305281|gb|EFQ81349.1| ACT domain protein [Corynebacterium pseudogenitalium ATCC 33035]
Length = 89
Score = 33.9 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
++ + AD GI+ V L E IN+ + ++ + L ++ ++ +
Sbjct: 4 IMTVTGADSTGIIAAVTTTLAELDINVID--VSQTLMGGYFTMILRVEFDADKVSIQAIK 61
Query: 85 V 85
Sbjct: 62 E 62
>gi|226323248|ref|ZP_03798766.1| hypothetical protein COPCOM_01020 [Coprococcus comes ATCC 27758]
gi|225208438|gb|EEG90792.1| hypothetical protein COPCOM_01020 [Coprococcus comes ATCC 27758]
Length = 166
Score = 33.9 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVTI 89
+ G++ + + G NI G + + D IL+ + +++ +
Sbjct: 12 NNPGLLSRMAGLFSRRGYNIESITAGTTADPRFTRITIVASGDEQILSQIEKQVRKMEDV 71
Query: 90 RFVKQFE 96
+K
Sbjct: 72 IEIKPLN 78
>gi|315446019|ref|YP_004078898.1| formyltetrahydrofolate deformylase [Mycobacterium sp. Spyr1]
gi|315264322|gb|ADU01064.1| formyltetrahydrofolate deformylase [Mycobacterium sp. Spyr1]
Length = 295
Score = 33.9 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHF-HLGRSQSTEHAIS 67
+ + AD G+V V L E G NI Q+ +
Sbjct: 17 RLLLRCADRPGLVAAVSTFLAEAGANIISLDQHSTQQTGGTFMQ 60
>gi|312898928|ref|ZP_07758316.1| homoserine dehydrogenase [Megasphaera micronuciformis F0359]
gi|310620090|gb|EFQ03662.1| homoserine dehydrogenase [Megasphaera micronuciformis F0359]
Length = 428
Score = 33.9 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
I ++ A+ G++ + + ++GI+I + + ++ E A + +D + +V
Sbjct: 347 APYYIRLIAANAPGVLANMSGVFAKHGISIRSL-IQKDETKEAAEIVILVDSTPCKTVRF 405
Query: 82 KLSVNVT 88
L+
Sbjct: 406 ALNEIEQ 412
>gi|281412213|ref|YP_003346292.1| Prephenate dehydratase [Thermotoga naphthophila RKU-10]
gi|281373316|gb|ADA66878.1| Prephenate dehydratase [Thermotoga naphthophila RKU-10]
Length = 552
Score = 33.9 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 23/76 (30%), Gaps = 3/76 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL--GRSQSTEHAISFLCIDGSIL 76
++ + D G + V +I GIN+ R+ ++ ++ +
Sbjct: 464 MEGRYTSLFFGVQDRPGSLKAVLDIFANRGINLRKLESRPARTFLGDYVFFV-EVEAPLK 522
Query: 77 NSVLEKLSVNVTIRFV 92
+ L +
Sbjct: 523 EEDIRDLEKVTAFYKI 538
>gi|228954938|ref|ZP_04116956.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228804759|gb|EEM51360.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 214
Score = 33.9 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 19/55 (34%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ GI+ V I + INI + ++ + I V++ L
Sbjct: 145 KNEPGILGKVVAIFSDLQINIVSVLVYPAKDENDKVLVFRIQTMNPLKVIDALEA 199
>gi|198277065|ref|ZP_03209596.1| hypothetical protein BACPLE_03273 [Bacteroides plebeius DSM 17135]
gi|198269563|gb|EDY93833.1| hypothetical protein BACPLE_03273 [Bacteroides plebeius DSM 17135]
Length = 736
Score = 33.9 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Query: 27 CIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI---DGSILNSVLEKL 83
I + DI GIV + +I+ + NI + L + D + L S+++K+
Sbjct: 668 IIGHDDI-GIVTNITSIINKEN-NILLRSISIDSHDGLFSGMLTVTVDDNAKLESLIKKI 725
Query: 84 SVNVTIRFV 92
++ V
Sbjct: 726 KTVKGVKQV 734
>gi|95931489|ref|ZP_01314187.1| GTP diphosphokinase [Desulfuromonas acetoxidans DSM 684]
gi|95132459|gb|EAT14160.1| GTP diphosphokinase [Desulfuromonas acetoxidans DSM 684]
Length = 392
Score = 33.9 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID-GSIL--NSVLEKLSVNV 87
D G++ + + + + NI + + S ++ ID ++ V+ L
Sbjct: 321 HDQKGVLAEITSCITKCEANITSARV-NASSGSKGLNEFEIDVNNVDHLKEVMAALKALK 379
Query: 88 TI 89
+
Sbjct: 380 GV 381
>gi|325958039|ref|YP_004289505.1| amino acid-binding ACT domain-containing protein
[Methanobacterium sp. AL-21]
gi|325329471|gb|ADZ08533.1| amino acid-binding ACT domain protein [Methanobacterium sp.
AL-21]
Length = 218
Score = 33.9 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE-KLS 84
I I + G++ + ++ + GINI++ HL + E A ++ ++ L +
Sbjct: 6 ITIKAHNKPGVLRDITEMMAKCGINISYTHLF-VEKDESASVYMELEDVKDIETLAHNIL 64
Query: 85 VNVTIRFV 92
+ + V
Sbjct: 65 THGNVDDV 72
>gi|254468064|ref|ZP_05081470.1| acetolactate synthase, small subunit [beta proteobacterium KB13]
gi|207086874|gb|EDZ64157.1| acetolactate synthase, small subunit [beta proteobacterium KB13]
Length = 163
Score = 33.9 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG--SILNSVLE 81
+I ++ + G + V + G NI + ++ + + + G I+ +++
Sbjct: 3 HIISLLMENEAGALSRVAGLFSARGYNIESLTVAPTEDSSLSRMTIVTSGSDEIIEQIIK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 63 QLNKLIDVVKV 73
>gi|149184823|ref|ZP_01863141.1| acetolactate synthase small subunit [Erythrobacter sp. SD-21]
gi|148832143|gb|EDL50576.1| acetolactate synthase small subunit [Erythrobacter sp. SD-21]
Length = 171
Score = 33.9 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
R ++ ++ + GI+ + + G NI + +HAIS + + V++
Sbjct: 9 ERHVLNVIVDNEAGILAKISGLFTARGYNIDSLTVADISE-DHAISRITVVTRGPEPVID 67
Query: 82 KLSV 85
++
Sbjct: 68 QIRA 71
>gi|88602527|ref|YP_502705.1| acetolactate synthase 3 regulatory subunit [Methanospirillum
hungatei JF-1]
gi|88187989|gb|ABD40986.1| acetolactate synthase, small subunit [Methanospirillum hungatei
JF-1]
Length = 167
Score = 33.9 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL--NSVLE 81
+ ++ D G++ V + G NI +G + + + + + G+ + V +
Sbjct: 4 HIFSVLVEDSPGVLSRVTGLFSRRGFNIESLAVGHCEQPDTSRITIVVTGNDVQIEQVKK 63
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 64 QLNKLIEVIKV 74
>gi|330812202|ref|YP_004356664.1| hypothetical protein PSEBR_a5187 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327380310|gb|AEA71660.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 172
Score = 33.5 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
I + D G V + + + E+G N + R I + ++E L
Sbjct: 6 ITVFAPDKPGQVERIADCIAEHGGNWLESRMSRLAGQFAGILRIGAPAEAHEELIEALQG 65
Query: 86 NVTIRFVKQF 95
+ ++
Sbjct: 66 L-STHDIRVL 74
>gi|297617637|ref|YP_003702796.1| homoserine dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
gi|297145474|gb|ADI02231.1| homoserine dehydrogenase [Syntrophothermus lipocalidus DSM 12680]
Length = 430
Score = 33.5 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 7/73 (9%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
I I + M+ D G++ + + G + ++IA + + S E
Sbjct: 336 EIIPID--KVESKFYIRMLV---KDRPGVLAAIAGVFGSHQLSIAT--VLQKTSGEEFAQ 388
Query: 68 FLCIDGSILNSVL 80
+ + + S L
Sbjct: 389 LVLVTHRVPESDL 401
>gi|294789310|ref|ZP_06754548.1| acetolactate synthase, small subunit [Simonsiella muelleri ATCC
29453]
gi|294482735|gb|EFG30424.1| acetolactate synthase, small subunit [Simonsiella muelleri ATCC
29453]
Length = 163
Score = 33.5 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ I+ + G + V + NI + ++ + + D ++ + +
Sbjct: 3 HILSILMENESGAMSRVVGLFSARDYNIDSLSVAPTEDATLSRMTIVTRGDSQVIEQITK 62
Query: 82 KLSVNVTIRFV 92
+L+ V + V
Sbjct: 63 QLNKLVEVIKV 73
>gi|325266261|ref|ZP_08132940.1| homoserine dehydrogenase [Kingella denitrificans ATCC 33394]
gi|324982223|gb|EGC17856.1| homoserine dehydrogenase [Kingella denitrificans ATCC 33394]
Length = 435
Score = 33.5 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 22/61 (36%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIRF 91
D G++ + N+L + G++I A + ++ +V L +
Sbjct: 361 DKAGVLGTIANLLAKEGVSIEALIQKAVLDNNQAEIVILTHSTVERNVKTALRAIEALDS 420
Query: 92 V 92
V
Sbjct: 421 V 421
>gi|297198672|ref|ZP_06916069.1| prephenate dehydrogenase [Streptomyces sviceus ATCC 29083]
gi|297147169|gb|EDY58613.2| prephenate dehydrogenase [Streptomyces sviceus ATCC 29083]
Length = 307
Score = 33.5 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 27/82 (32%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+++ + ++ ++ D G + + G G+NI + + + + L
Sbjct: 225 VRVPGKHGSAPRMYEVVAVLIDDQPGQLARIFADAGRAGVNIEDVRIEHATGQQAGLVQL 284
Query: 70 CIDGSILNSVLEKLSVNVTIRF 91
++ S + L
Sbjct: 285 MVEPSAAPVLAASLRERGWAIR 306
>gi|291519230|emb|CBK74451.1| acetolactate synthase, small subunit [Butyrivibrio fibrisolvens
16/4]
Length = 166
Score = 33.5 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKLSVNVT 88
+ G+ + + G NI F G + + + D +L + +++S
Sbjct: 12 ENTPGLTSRISGLFSRRGYNIDSFSAGVTADPRYTRVTIVTHGDEMVLEQIEKQVSKLTD 71
Query: 89 IRFVKQFE 96
+ +K E
Sbjct: 72 VVDLKVLE 79
>gi|219558993|ref|ZP_03538069.1| formyltetrahydrofolate deformylase [Mycobacterium tuberculosis
T17]
gi|289571159|ref|ZP_06451386.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis T17]
gi|289544913|gb|EFD48561.1| formyltetrahydrofolate deformylase purU [Mycobacterium
tuberculosis T17]
Length = 310
Score = 33.5 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINI 51
+ + D GI+ V L G NI
Sbjct: 32 RLLLRCHDRPGIIAAVSTFLARAGANI 58
>gi|157374426|ref|YP_001473026.1| GTP diphosphokinase [Shewanella sediminis HAW-EB3]
gi|157316800|gb|ABV35898.1| GTP diphosphokinase [Shewanella sediminis HAW-EB3]
Length = 735
Score = 33.5 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS---VLEKLS 84
I+ +D G++ + ++L ++ T+ A L ++ L+ V+ KL+
Sbjct: 665 IIASDRSGLLRDLTSVLAAEKTHVMAMSSSSDVKTQTAAIELELELYNLDDLSRVIAKLT 724
Query: 85 VNVTIRFVKQF 95
+ ++
Sbjct: 725 QIDGVSEARRL 735
>gi|29831102|ref|NP_825736.1| aspartate kinase [Streptomyces avermitilis MA-4680]
gi|29608216|dbj|BAC72271.1| putative aspartate kinase [Streptomyces avermitilis MA-4680]
Length = 430
Score = 33.5 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 5/69 (7%), Positives = 20/69 (28%), Gaps = 3/69 (4%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN--SVLEKLSVNVTI 89
D G + + + +NI + + ++ + ++ L ++
Sbjct: 282 DKPGEAASIFRAIADAEVNI-DMVVQNVSAASTGLTDISFTLPKTEGRKAIDALEKAKSV 340
Query: 90 RFVKQFEFN 98
++
Sbjct: 341 IGFDSLRYD 349
>gi|330944251|ref|XP_003306339.1| hypothetical protein PTT_19469 [Pyrenophora teres f. teres 0-1]
gi|311316189|gb|EFQ85572.1| hypothetical protein PTT_19469 [Pyrenophora teres f. teres 0-1]
Length = 520
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 26/79 (32%), Gaps = 5/79 (6%)
Query: 10 IKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFL 69
+ ++ + D + + ++ ++ G++ V IL + NI + A
Sbjct: 399 VNLRSLTLD-QPDCMRVIYIHKNVPGVLRQVNGILLHH--NIEKQMS--DSKNDIAYLMA 453
Query: 70 CIDGSILNSVLEKLSVNVT 88
I + + +
Sbjct: 454 DISEVKEGEIRDLFTSLEE 472
>gi|241760191|ref|ZP_04758288.1| acetolactate synthase, small subunit [Neisseria flavescens SK114]
gi|241319388|gb|EER55846.1| acetolactate synthase, small subunit [Neisseria flavescens SK114]
Length = 163
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 8/71 (11%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ I+ + G + V + NI + ++ + + D ++ + +
Sbjct: 3 HILSILMENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLSRMTIVTHGDEHVIEQITK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 63 QLNKLIEVIKV 73
>gi|189423551|ref|YP_001950728.1| threonine dehydratase [Geobacter lovleyi SZ]
gi|189419810|gb|ACD94208.1| threonine dehydratase [Geobacter lovleyi SZ]
Length = 406
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 11/37 (29%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQST 62
+ I D G + + L E NI R
Sbjct: 332 LRIEMQDTPGALAHLATDLAEAKANIHDITHDRRTKG 368
>gi|317471529|ref|ZP_07930880.1| acetolactate synthase [Anaerostipes sp. 3_2_56FAA]
gi|316901024|gb|EFV22987.1| acetolactate synthase [Anaerostipes sp. 3_2_56FAA]
Length = 166
Score = 33.5 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEKL 83
+ IV + G++ + + G NI ++Q +++ + + D +IL + +L
Sbjct: 6 LSIVAENNPGVLSRISGLFSRRGYNIDSITACKTQDEKYSRMTIAVSGDDTILAQIKNQL 65
Query: 84 SVNVTIR 90
+
Sbjct: 66 IKLEDVI 72
>gi|222445398|ref|ZP_03607913.1| hypothetical protein METSMIALI_01032 [Methanobrevibacter smithii
DSM 2375]
gi|222434963|gb|EEE42128.1| hypothetical protein METSMIALI_01032 [Methanobrevibacter smithii
DSM 2375]
Length = 253
Score = 33.5 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Query: 14 EINFDVDIGRLMICIVNADILGIVVFVGNIL-GEYGINIAHFHLGRSQSTE 63
D + ++ I N ++ + VG I G INIA +
Sbjct: 97 GFELDYNKRAQILVIRNREVPKTLGKVGIITAGTSDINIAEEARVIVEEGG 147
>gi|196229670|ref|ZP_03128534.1| Homoserine dehydrogenase [Chthoniobacter flavus Ellin428]
gi|196225996|gb|EDY20502.1| Homoserine dehydrogenase [Chthoniobacter flavus Ellin428]
Length = 431
Score = 33.5 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 22/72 (30%), Gaps = 4/72 (5%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL---NSVLEKLSVNV 87
D G+V V +LG I I+ E I + + L+++
Sbjct: 357 EDRPGVVAQVAGVLGALNIGISSLFQPEGTEGEAVPLVFVIHKATSAQIQNALDQIGALP 416
Query: 88 TIRFV-KQFEFN 98
++ +
Sbjct: 417 CVKKAPRMIRVE 428
>gi|186475696|ref|YP_001857166.1| homoserine dehydrogenase [Burkholderia phymatum STM815]
gi|184192155|gb|ACC70120.1| Homoserine dehydrogenase [Burkholderia phymatum STM815]
Length = 443
Score = 33.5 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 31/100 (31%), Gaps = 9/100 (9%)
Query: 8 RFIKIQEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQ-----ST 62
R + D + + AD+ G++ + IL + GI+I S+
Sbjct: 341 RLSNTPILPIDEVTSGYYLRLRVADVTGVLADITRILADTGISIDALLQKESEHVDASKK 400
Query: 63 EHAISFLCIDGSILNSVLEKLSVNVT----IRFVKQFEFN 98
L ++ +V ++ + V +
Sbjct: 401 GETDIILITHETVEKNVNAAIANIEALKTVVSKVTKLRME 440
>gi|167038687|ref|YP_001661672.1| acetolactate synthase, small subunit [Thermoanaerobacter sp.
X514]
gi|256751443|ref|ZP_05492321.1| acetolactate synthase, small subunit [Thermoanaerobacter
ethanolicus CCSD1]
gi|300913753|ref|ZP_07131070.1| acetolactate synthase, small subunit [Thermoanaerobacter sp.
X561]
gi|307723230|ref|YP_003902981.1| acetolactate synthase small subunit [Thermoanaerobacter sp. X513]
gi|166852927|gb|ABY91336.1| acetolactate synthase, small subunit [Thermoanaerobacter sp.
X514]
gi|256749662|gb|EEU62688.1| acetolactate synthase, small subunit [Thermoanaerobacter
ethanolicus CCSD1]
gi|300890438|gb|EFK85583.1| acetolactate synthase, small subunit [Thermoanaerobacter sp.
X561]
gi|307580291|gb|ADN53690.1| acetolactate synthase, small subunit [Thermoanaerobacter sp.
X513]
Length = 167
Score = 33.5 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I ++ + G++ V + G NI +G ++ + + L + D + ++
Sbjct: 2 HIISVLVNNHPGVLSRVVGLFSRRGYNIESLAVGTTEREDVSRITLTVGGDDYTVTQMIR 61
Query: 82 KLSVNVTIRFVKQF 95
+L+ + + V+
Sbjct: 62 QLNKLIDVLKVQNI 75
>gi|78779636|ref|YP_397748.1| acetolactate synthase 3 regulatory subunit [Prochlorococcus
marinus str. MIT 9312]
gi|78713135|gb|ABB50312.1| acetolactate synthase, small subunit [Prochlorococcus marinus
str. MIT 9312]
Length = 174
Score = 33.5 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA--ISFLCIDGSILNSVLE 81
+ ++ D G + + + G NI +G ++S + + D + L + +
Sbjct: 3 HTLSVLVEDESGALSRISGLFARRGFNIDSLAVGPAESKGISRLTMVVEGDDATLQQMTK 62
Query: 82 KLSVNVTIRFV 92
+L+ + V
Sbjct: 63 QLNKLFNVLGV 73
>gi|326391824|ref|ZP_08213340.1| homoserine dehydrogenase [Thermoanaerobacter ethanolicus JW 200]
gi|325992130|gb|EGD50606.1| homoserine dehydrogenase [Thermoanaerobacter ethanolicus JW 200]
Length = 418
Score = 33.5 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ I ++ D G++ + ILG+ GI++ + + + A L + V E
Sbjct: 337 SKYYIRLIAFDKPGVMSKITGILGDKGISLLS-VVQKGVLGDTAEIVLITHIANTGKVFE 395
Query: 82 KLSVNVTIRFVKQFE 96
L +R V+ E
Sbjct: 396 ALEEIQNLREVESIE 410
>gi|323144354|ref|ZP_08078964.1| acetolactate synthase, small subunit [Succinatimonas hippei YIT
12066]
gi|322415879|gb|EFY06603.1| acetolactate synthase, small subunit [Succinatimonas hippei YIT
12066]
Length = 165
Score = 33.5 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+I I+ + G + V + + G NI + ++ + + D + +
Sbjct: 3 HVISILIENEAGALSRVVGLFSQRGYNIDSLTVAPTEDPTLSRCTILTLGDEEEAEQITK 62
Query: 82 KLSVNVTIRFV 92
+L V + V
Sbjct: 63 QLHKLVDVLRV 73
>gi|307265058|ref|ZP_07546618.1| Homoserine dehydrogenase [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919856|gb|EFN50070.1| Homoserine dehydrogenase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 418
Score = 33.5 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ I ++ D G++ + ILG+ GI++ + + + A L + V E
Sbjct: 337 SKYYIRLIAFDKPGVMSKITGILGDKGISLLS-VVQKGVLGDTAEIVLITHIANTGKVFE 395
Query: 82 KLSVNVTIRFVKQFE 96
L +R V+ E
Sbjct: 396 ALEEIQNLREVESIE 410
>gi|294636105|ref|ZP_06714532.1| transcriptional regulatory protein TyrR [Edwardsiella tarda ATCC
23685]
gi|291090585|gb|EFE23146.1| transcriptional regulatory protein TyrR [Edwardsiella tarda ATCC
23685]
Length = 530
Score = 33.5 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D +G+ + ++L I++ + ++F +D I ++ ++ +
Sbjct: 8 EDRIGLTRELLDLLAARSIDLRGIEI--DTIGRIYLNFTELDFEIFRQLMAEIRRINGVT 65
Query: 91 FVKQFEF 97
V+ F
Sbjct: 66 DVRTVPF 72
>gi|256822070|ref|YP_003146033.1| (p)ppGpp synthetase I SpoT/RelA [Kangiella koreensis DSM 16069]
gi|256795609|gb|ACV26265.1| (p)ppGpp synthetase I, SpoT/RelA [Kangiella koreensis DSM 16069]
Length = 736
Score = 33.5 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 24/83 (28%), Gaps = 12/83 (14%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
D + I D ++ + IL + L S+ E + ++
Sbjct: 658 NAYAVD-------LVITAMDRKSLLKDITTILANENAGVTD--LSTSKRGEQVQINIEVE 708
Query: 73 GSILNS---VLEKLSVNVTIRFV 92
S L V+ L I V
Sbjct: 709 LSQLEDLQRVITLLKQLPNIFKV 731
>gi|148979136|ref|ZP_01815344.1| transcriptional regulator TyrR [Vibrionales bacterium SWAT-3]
gi|145962002|gb|EDK27291.1| transcriptional regulator TyrR [Vibrionales bacterium SWAT-3]
Length = 514
Score = 33.5 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + ++ ID + ++ ++ ++
Sbjct: 8 EDRLGLTRELLDILASKSIDLRGIEI--DVKGIIYLNCPDIDFDAFSELMAEIRRISGVK 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|110669015|ref|YP_658826.1| formyltetrahydrofolate deformylase [Haloquadratum walsbyi DSM
16790]
gi|109626762|emb|CAJ53229.1| formyltetrahydrofolate deformylase [Haloquadratum walsbyi DSM
16790]
Length = 327
Score = 33.5 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS 78
+ I +V D GIV + +L E GINI + ID +
Sbjct: 1 MTGELTEITVVGDDKTGIVANITTLLFERGINIVDIDQAIREGMFRMTLRADIDEMVCTE 60
Query: 79 --VLEKLSVNVTIRFVK-QFEFNVD 100
+ E L+ V Q F D
Sbjct: 61 STLRETLTELGDDLEVDIQIRFPTD 85
>gi|11465696|ref|NP_053840.1| acetohydroxyacid synthase small subunit [Porphyra purpurea]
gi|1708470|sp|P51230|ILVH_PORPU RecName: Full=Acetolactate synthase small subunit; AltName:
Full=Acetohydroxy-acid synthase small subunit;
Short=AHAS; Short=ALS
gi|1276696|gb|AAC08116.1| acetohydroxyacid synthase small subunit [Porphyra purpurea]
Length = 174
Score = 33.5 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
+ ++ D G++ + + G NIA +G ++ + + + D + + +
Sbjct: 3 HTLSVLVQDEAGVLSRISGLFARRGFNIASLAVGPAEQIGVSRITMVVQGDNRTIEQLTK 62
Query: 82 KLSVNVTIRFVKQFE 96
+L V I V+
Sbjct: 63 QLYKLVNILNVQDVT 77
>gi|315426594|dbj|BAJ48223.1| conserved hypothetical protein [Candidatus Caldiarchaeum
subterraneum]
Length = 268
Score = 33.5 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISF---LCID----GSILNSVLEKLS 84
D G + V + YG+NI + + +S T+ + + + D + + ++
Sbjct: 32 DRPGSLAEVLAVFATYGVNIVNIYTTQSIYTDTSSTVEANIAADLTGKNVSSEQLAKSIN 91
Query: 85 VNVTIRFVKQFE 96
+ +++ V
Sbjct: 92 LLNSVKRVTVVS 103
>gi|257452387|ref|ZP_05617686.1| hypothetical protein F3_04915 [Fusobacterium sp. 3_1_5R]
gi|257465820|ref|ZP_05630131.1| hypothetical protein FgonA2_00040 [Fusobacterium gonidiaformans
ATCC 25563]
gi|315916977|ref|ZP_07913217.1| chorismate mutase [Fusobacterium gonidiaformans ATCC 25563]
gi|317058930|ref|ZP_07923415.1| chorismate mutase [Fusobacterium sp. 3_1_5R]
gi|313684606|gb|EFS21441.1| chorismate mutase [Fusobacterium sp. 3_1_5R]
gi|313690852|gb|EFS27687.1| chorismate mutase [Fusobacterium gonidiaformans ATCC 25563]
Length = 159
Score = 33.5 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSIL-----NSVLEKLSV 85
D G++ + ++ + +NI + + + + G+ + L K+ V
Sbjct: 87 KDRQGLLAQILEVIADDKMNILTI-VQNAAVDGIVQLTISLQGTAETPKNIETTLAKIQV 145
Query: 86 NVTIRFVKQF 95
+R ++
Sbjct: 146 IDGVRDLRIL 155
>gi|328957952|ref|YP_004375338.1| component of the acetoin degradation regulation pathway
[Carnobacterium sp. 17-4]
gi|328674276|gb|AEB30322.1| component of the acetoin degradation regulation pathway
[Carnobacterium sp. 17-4]
Length = 219
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 7/84 (8%)
Query: 9 FIKIQEINFDVDIGRLMICIVN-ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAIS 67
FI I N I I D GI+ + NIL E I+I + R
Sbjct: 131 FIDIMGYNN----KGSRIVIDIPEDHPGILEDITNILSEAQISIDQIAVYRKDH--FTQV 184
Query: 68 FLCIDGSILNSVLEKLSVNVTIRF 91
+ +D S ++ E L+ +
Sbjct: 185 IIQMDSSDTKAIKEILTTSGYTIS 208
>gi|325294307|ref|YP_004280821.1| homoserine dehydrogenase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064755|gb|ADY72762.1| homoserine dehydrogenase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 427
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 26/70 (37%), Gaps = 5/70 (7%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS----VLE 81
+ D G++ + IL +YGI+I L +S + + + S +E
Sbjct: 349 LRFTAVDKPGVLAKISKILADYGISI-KMALQKSININGGVPVVMTTHPACKSNVQKAIE 407
Query: 82 KLSVNVTIRF 91
++ I
Sbjct: 408 EIDKLDVILK 417
>gi|221309171|ref|ZP_03591018.1| formyltetrahydrofolate deformylase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313497|ref|ZP_03595302.1| formyltetrahydrofolate deformylase [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318419|ref|ZP_03599713.1| formyltetrahydrofolate deformylase [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322693|ref|ZP_03603987.1| formyltetrahydrofolate deformylase [Bacillus subtilis subsp.
subtilis str. SMY]
gi|255767307|ref|NP_389194.2| formyltetrahydrofolate deformylase [Bacillus subtilis subsp.
subtilis str. 168]
gi|321315062|ref|YP_004207349.1| formyltetrahydrofolate deformylase [Bacillus subtilis BSn5]
gi|239938685|sp|O34990|PURU_BACSU RecName: Full=Formyltetrahydrofolate deformylase; AltName:
Full=Formyl-FH(4) hydrolase
gi|225184934|emb|CAB13168.2| formyltetrahydrofolate hydrolase [Bacillus subtilis subsp.
subtilis str. 168]
gi|320021336|gb|ADV96322.1| formyltetrahydrofolate deformylase [Bacillus subtilis BSn5]
Length = 300
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 15/49 (30%), Gaps = 1/49 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGIN-IAHFHLGRSQSTEHAISFLCID 72
+ + D GIV V L E+G N I + D
Sbjct: 21 RLLVSCPDQPGIVSAVSAFLFEHGANIIESNQYTTDPEGGRFFLRIEFD 69
>gi|187477599|ref|YP_785623.1| GTP pyrophosphokinase [Bordetella avium 197N]
gi|115422185|emb|CAJ48709.1| putative GTP pyrophosphokinase [Bordetella avium 197N]
Length = 743
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 25/79 (31%), Gaps = 8/79 (10%)
Query: 15 INFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
D+ + D G++ + + +N+ + QS H + + + G+
Sbjct: 669 YPVDIS-------VRAHDRPGLLRDLSEVFARLRLNVVGVNTQSKQSLAHMVFTVEVRGA 721
Query: 75 IL-NSVLEKLSVNVTIRFV 92
L+ L +
Sbjct: 722 SSLQKALDALREVAGVSAA 740
>gi|61657504|emb|CAI44415.1| chorismate mutase/prephenate dehydratase [Thermotoga sp. RQ2]
Length = 353
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 23/76 (30%), Gaps = 3/76 (3%)
Query: 19 VDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHL--GRSQSTEHAISFLCIDGSIL 76
++ + D G + V +I GIN+ R+ ++ ++ +
Sbjct: 265 MEGKYTSLFFGVQDRPGSLKAVLDIFASRGINLRKLESRPARTFLGDYVFFV-EVEAPLK 323
Query: 77 NSVLEKLSVNVTIRFV 92
+ L +
Sbjct: 324 EEDIRDLEKVTAFYKI 339
>gi|2632031|emb|CAA05590.1| YkkE [Bacillus subtilis]
Length = 300
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 15/49 (30%), Gaps = 1/49 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGIN-IAHFHLGRSQSTEHAISFLCID 72
+ + D GIV V L E+G N I + D
Sbjct: 21 RLLVSCPDQPGIVSAVSAFLFEHGANIIESNQYTTDPEGGRFFLRIEFD 69
>gi|309378522|emb|CBX22875.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 163
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 7/71 (9%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ ++ + G + V + NI + ++ + + D ++ + +
Sbjct: 3 HILSVLMENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLSRMTIVTHGDEQVIEQITK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 63 QLNKLIEVIKV 73
>gi|305663831|ref|YP_003860119.1| ACT domain-containing protein [Ignisphaera aggregans DSM 17230]
gi|304378400|gb|ADM28239.1| ACT domain-containing protein [Ignisphaera aggregans DSM 17230]
Length = 94
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
I ++ AD GIV + ++ ++ +NI ++ + +D S + L KL
Sbjct: 10 IVVIGADRPGIVAGITGVIAKHNVNIVDI--SQTVVRGIFSMIMIVDLSTGDIDLPKLRE 67
>gi|313668045|ref|YP_004048329.1| acetolactate synthase isozyme III small subunit [Neisseria
lactamica ST-640]
gi|313005507|emb|CBN86943.1| acetolactate synthase isozyme III small subunit [Neisseria
lactamica 020-06]
Length = 163
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 7/71 (9%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ ++ + G + V + NI + ++ + + D ++ + +
Sbjct: 3 HILSVLMENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLSRMTIVTHGDEQVIEQITK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 63 QLNKLIEVIKV 73
>gi|296108698|ref|YP_003615647.1| amino acid-binding ACT domain protein [Methanocaldococcus
infernus ME]
gi|295433512|gb|ADG12683.1| amino acid-binding ACT domain protein [Methanocaldococcus
infernus ME]
Length = 162
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 7/76 (9%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEH---AISFLCIDGSILNSVLEKLSVNV 87
D G ++ V + +Y NI R + + D L +LE++
Sbjct: 10 NDKPGELLKVLTPISKYKANIITIIHSREEIVGGRVPIRLVIDTDKEKLKKILEEIEKVA 69
Query: 88 TIRFV----KQFEFNV 99
++ V + +V
Sbjct: 70 IVKKVDGEERAIYLDV 85
>gi|288942327|ref|YP_003444567.1| amino acid-binding ACT domain-containing protein [Allochromatium
vinosum DSM 180]
gi|288897699|gb|ADC63535.1| amino acid-binding ACT domain protein [Allochromatium vinosum DSM
180]
Length = 145
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 16/43 (37%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS 74
D G + IL + +NI + + + + AI +
Sbjct: 78 DRPGGLAEALRILEDADLNIEYMYAFSLRRGDKAILIFRFEDP 120
>gi|21226779|ref|NP_632701.1| acetolactate synthase small subunit [Methanosarcina mazei Go1]
gi|20905073|gb|AAM30373.1| Acetolactate synthase small subunit [Methanosarcina mazei Go1]
Length = 149
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
++ I D+ G + + + GE IN+ + + + A+ + ++ ++
Sbjct: 75 ETSVLGIEMEDVPGSMSRIAEVFGEANINLDYAYAF-VTRDQKALLIVRVND--TQKAIK 131
Query: 82 KLSV 85
L
Sbjct: 132 TLEE 135
>gi|326515010|dbj|BAJ99866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 458
Score = 33.5 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Query: 14 EINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDG 73
+ + + + +I ++ D G++ V +L NIA + + + +
Sbjct: 119 GVEAEAEAAQTVIELIGRDRPGLLSEVFAVLTNLKCNIAASEV--WTHDGRMAALMYVTD 176
Query: 74 SILNSVLEKLSVNVTIRF 91
+ +E+ T++
Sbjct: 177 AETGGSIEEPERLDTVKR 194
>gi|294669510|ref|ZP_06734577.1| hypothetical protein NEIELOOT_01408 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308423|gb|EFE49666.1| hypothetical protein NEIELOOT_01408 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 163
Score = 33.5 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 8/71 (11%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
++ ++ + G + V + G NI + ++ + + D ++ + +
Sbjct: 3 HILSVLMENESGAMSRVVGLFSARGYNIDSLSVSATEDKTLSRMTIVTHGDDVVIEQITK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 63 QLNKLIEVVKV 73
>gi|302417080|ref|XP_003006371.1| Formyl transferase [Verticillium albo-atrum VaMs.102]
gi|261353973|gb|EEY16401.1| Formyl transferase [Verticillium albo-atrum VaMs.102]
Length = 283
Score = 33.5 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 18/58 (31%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
++ + D GIV V I E +NI +E + + S
Sbjct: 3 NDHILTLSCPDKPGIVHAVTGIFAEQNLNILDLQQFSDPVSEKFFMRVHFGPTPSEST 60
>gi|225848480|ref|YP_002728643.1| GTP pyrophosphokinase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644209|gb|ACN99259.1| GTP pyrophosphokinase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 711
Score = 33.5 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 28 IVNADILGIVVFVGNILGEYGINIAHFHLGR-SQSTEHAISFLCI-DGSILNSVLEKLSV 85
++ D G++ + N++ G NI + + L + D + LN++L +
Sbjct: 642 VIAEDKPGVLANISNVIASTGSNIKNVKVSELKDKKALIKFSLEVKDKNHLNTILNSIKN 701
Query: 86 NVTIRFVKQF 95
+ V++
Sbjct: 702 FSDVVKVERI 711
>gi|217967326|ref|YP_002352832.1| putative signal transduction protein with CBS domains [Dictyoglomus
turgidum DSM 6724]
gi|217336425|gb|ACK42218.1| putative signal transduction protein with CBS domains [Dictyoglomus
turgidum DSM 6724]
Length = 214
Score = 33.5 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 6/53 (11%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 23 RLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS-TEHAISFLCIDGS 74
L + + G + + +++ + INI ++ ++ L ++
Sbjct: 140 GLRYTLRIKNTPGEIAHIVSLIAKENINIMSMATFPAEDTEDYGYLVLRLETE 192
>gi|313633154|gb|EFS00039.1| GTP diphosphokinase [Listeria seeligeri FSL N1-067]
Length = 287
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 13 QEINFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCID 72
+ N D++I + G++ + ++ NI + + +
Sbjct: 208 NDYNVDIEIYGY-------NRNGLLNDILQVINSLTSNINGVNAKVDNNKMATLVVTLQI 260
Query: 73 GSIL--NSVLEKLSVNVTIRFVKQF 95
+I V++K+ + V++
Sbjct: 261 HNINHLQRVVDKIKQIPDVYTVRRL 285
>gi|170727691|ref|YP_001761717.1| (p)ppGpp synthetase I SpoT/RelA [Shewanella woodyi ATCC 51908]
gi|169813038|gb|ACA87622.1| (p)ppGpp synthetase I, SpoT/RelA [Shewanella woodyi ATCC 51908]
Length = 735
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 13 QEINFDVDIGRL-------MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHA 65
E DV G + ++ D G++ + ++L ++ T+ A
Sbjct: 643 PERTVDVVWGEHYSGGYKIRLRVIANDRSGLLRDLTSVLAAEKSHVMAMSSSSDVKTQTA 702
Query: 66 ISFLCIDGSILN---SVLEKLSVNVTIRFVKQF 95
L ++ L+ V+ K++ + ++
Sbjct: 703 AIELELELYNLDGLSRVISKITQVEGVSEARRL 735
>gi|329939355|ref|ZP_08288691.1| aspartate kinase [Streptomyces griseoaurantiacus M045]
gi|329301584|gb|EGG45478.1| aspartate kinase [Streptomyces griseoaurantiacus M045]
Length = 434
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 8/68 (11%), Positives = 19/68 (27%), Gaps = 6/68 (8%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN-----SVLEKLSVN 86
D G + + + INI + + ++ + LEK
Sbjct: 286 DKPGEAASIFRAIADAEINI-DMVVQNVSAASTGLTDISFTLPKAEGRKAIDALEKARQV 344
Query: 87 VTIRFVKQ 94
+ ++
Sbjct: 345 IGFDSLRY 352
>gi|294783445|ref|ZP_06748769.1| GTP diphosphokinase [Fusobacterium sp. 1_1_41FAA]
gi|294480323|gb|EFG28100.1| GTP diphosphokinase [Fusobacterium sp. 1_1_41FAA]
Length = 725
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 7/91 (7%)
Query: 9 FIKIQEINFDVDIGRLMICIVN--ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI 66
+K E + + + D I++ + N++G + INI + + +
Sbjct: 633 LVKWDENLIETKLNKYNFTFTIVLNDRPNILMEIVNLIGNHKINITSLNSYEVKKDGDKV 692
Query: 67 SFLCIDGSIL-----NSVLEKLSVNVTIRFV 92
+ I I + ++ + + V
Sbjct: 693 MKVKISIEIKGKTEYDYLINNILKLKDVIAV 723
>gi|209519539|ref|ZP_03268332.1| Homoserine dehydrogenase [Burkholderia sp. H160]
gi|209500018|gb|EEA00081.1| Homoserine dehydrogenase [Burkholderia sp. H160]
Length = 443
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 27/92 (29%), Gaps = 9/92 (9%)
Query: 16 NFDVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQS-----TEHAISFLC 70
D + + AD+ G++ + IL + GI+I S+ L
Sbjct: 349 PIDEVTSGYYLRLRVADVTGVLADITRILADSGISIDALLQKESERVDANGKGETDIILI 408
Query: 71 IDGSILNSVLEKLSVNVT----IRFVKQFEFN 98
++ V + + V +
Sbjct: 409 THVTVEKQVNAAIKSIEALQTVVSQVTKLRME 440
>gi|77919170|ref|YP_356985.1| ACT domain-containing protein [Pelobacter carbinolicus DSM 2380]
gi|77545253|gb|ABA88815.1| ACT domain protein [Pelobacter carbinolicus DSM 2380]
Length = 143
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 18/45 (40%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLC 70
I I +I G + V +LG+ G+NI L + +
Sbjct: 6 ISIFIENIPGRLAEVTTVLGKSGVNIRALSLADTTDFGVLRLIVD 50
>gi|77461403|ref|YP_350910.1| ACT domain-containing protein [Pseudomonas fluorescens Pf0-1]
gi|77385406|gb|ABA76919.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 172
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 21/61 (34%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSV 85
+ + D G V + + E+G N + R I + + + +++ L
Sbjct: 6 LTVFAPDKPGQVERIAQCIAEHGGNWLESRMSRMAGQFAGILRVGVPAEAYDELVDALQA 65
Query: 86 N 86
Sbjct: 66 L 66
>gi|323138452|ref|ZP_08073521.1| acetolactate synthase, small subunit [Methylocystis sp. ATCC
49242]
gi|322396248|gb|EFX98780.1| acetolactate synthase, small subunit [Methylocystis sp. ATCC
49242]
Length = 183
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
Query: 18 DVDIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN 77
+ I + ++ + G++ V + G NI + EH S + I S
Sbjct: 17 NAKIESHTLSVLVDNEPGVLARVVGLFSGRGYNIESLTVAEVAHAEH-HSRITIVTSGAP 75
Query: 78 SVLEKL-SVNVTIRFVKQFE 96
++++ + VKQ
Sbjct: 76 ETIDQIHHQLERLVPVKQVT 95
>gi|320102135|ref|YP_004177726.1| aspartate kinase [Isosphaera pallida ATCC 43644]
gi|319749417|gb|ADV61177.1| aspartate kinase [Isosphaera pallida ATCC 43644]
Length = 611
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 26/77 (33%), Gaps = 2/77 (2%)
Query: 17 FDVDIGRLMICIVNA-DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSI 75
D+D + + + + D G + + + GI + + + A +
Sbjct: 459 VDLDDTQARLTLESIPDRPGYAASIFRAVADAGI-MVDMIVQNAGVAGSASLSFTVPRQD 517
Query: 76 LNSVLEKLSVNVTIRFV 92
LE + + ++ V
Sbjct: 518 GPRTLEVIRTHPEVQTV 534
>gi|315608850|ref|ZP_07883824.1| GTP diphosphokinase [Prevotella buccae ATCC 33574]
gi|315249457|gb|EFU29472.1| GTP diphosphokinase [Prevotella buccae ATCC 33574]
Length = 737
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 16/79 (20%)
Query: 26 ICIVNADILGIVVFVGNILGEY------GINIAHFHLGRSQSTEHAISFLCI---DGSIL 76
+ IV D +GIV + NI+ + INI + + D S L
Sbjct: 666 LRIVGNDDIGIVSNITNIISKEDKLTMRNINI-------DSHDGLFNGNITVLLDDTSKL 718
Query: 77 NSVLEKLSVNVTIRFVKQF 95
++++KL ++ VK+
Sbjct: 719 EALMKKLRAVKGVKQVKRV 737
>gi|153004657|ref|YP_001378982.1| formyltetrahydrofolate deformylase [Anaeromyxobacter sp. Fw109-5]
gi|152028230|gb|ABS25998.1| formyltetrahydrofolate deformylase [Anaeromyxobacter sp. Fw109-5]
Length = 286
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGR-SQSTEHAISFLCIDGSILNSVLEKL 83
++ + D GIV + + L +G NI F + + L L+ +E L
Sbjct: 7 ILLVQCPDRPGIVAAISSFLFRHGANITDFDQHTADEEGGVYFTRLEFQTDRLDLPIEDL 66
Query: 84 S 84
Sbjct: 67 E 67
>gi|242280235|ref|YP_002992364.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio salexigens DSM
2638]
gi|242123129|gb|ACS80825.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio salexigens DSM
2638]
Length = 723
Score = 33.5 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAI--SFLCIDGSILNSVLEKLSVNVT 88
+ G++ + +L E +NI + + D L+ L KL
Sbjct: 656 RNHKGMLAKICTVLTEMDVNIDSGEFKSDLDGSSVLEFTVEVTDLGHLHRSLNKLKTIEH 715
Query: 89 IRFVKQFE 96
+ +
Sbjct: 716 VLEATRLS 723
>gi|268679287|ref|YP_003303718.1| RelA/SpoT family protein [Sulfurospirillum deleyianum DSM 6946]
gi|268617318|gb|ACZ11683.1| RelA/SpoT family protein [Sulfurospirillum deleyianum DSM 6946]
Length = 718
Score = 33.5 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Query: 20 DIGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
R + + + G + L + IN+ LG+S+ HA + + + +
Sbjct: 635 APERYKLIVSLDNKKGSLASFLAYLAKMQINLVTIELGKSEEEGHA-DYFEMILELPDKN 693
Query: 80 LEKLSV 85
+ +
Sbjct: 694 ISAVRE 699
>gi|209884431|ref|YP_002288288.1| small subunit of acetolactate synthase [Oligotropha
carboxidovorans OM5]
gi|209872627|gb|ACI92423.1| small subunit of acetolactate synthase [Oligotropha
carboxidovorans OM5]
Length = 185
Score = 33.5 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ ++ + G++ V + G NI + ++ +H +S + I + V++
Sbjct: 23 ETHTLSVLVQNEPGVLARVIGLFSGRGYNIESLTVSETERNKH-MSRITIVTTGTPMVIQ 81
Query: 82 KLSV 85
++
Sbjct: 82 QIKN 85
>gi|323705859|ref|ZP_08117431.1| acetolactate synthase, small subunit [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323534855|gb|EGB24634.1| acetolactate synthase, small subunit [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 161
Score = 33.5 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGS--ILNSVLEKLSVNVT 88
+ G++ V + G NI +G ++ + + L +DG ++ ++ +LS
Sbjct: 3 NNHSGVLSRVVGLFSRRGYNIESLAVGTTEQNDQSRITLTVDGDDYVITQIIRQLSKLYD 62
Query: 89 IRFV 92
+ V
Sbjct: 63 VIKV 66
>gi|306825874|ref|ZP_07459213.1| acetolactate synthase small subunit [Streptococcus sp. oral taxon
071 str. 73H25AP]
gi|304432235|gb|EFM35212.1| acetolactate synthase small subunit [Streptococcus sp. oral taxon
071 str. 73H25AP]
Length = 158
Score = 33.5 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLS 84
M+ + G++ +L +NI +G +++ + + ID + + V + +
Sbjct: 4 MLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGATENPNVSRITIIIDVASHDEVEQIIK 63
Query: 85 VNV---TIRFVKQFE 96
+ ++
Sbjct: 64 QLNRQIDVIRIRDIT 78
>gi|297839565|ref|XP_002887664.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
gi|297333505|gb|EFH63923.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 33.5 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 21 IGRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSV 79
I I+ D G++ V IL + IN+ A D + +V
Sbjct: 126 GDHTSIEIIARDRPGLLSEVSAILADLNINVVAAEAWTHNRR-IACVLYVNDNATSRAV 183
>gi|256751631|ref|ZP_05492506.1| Homoserine dehydrogenase [Thermoanaerobacter ethanolicus CCSD1]
gi|256749440|gb|EEU62469.1| Homoserine dehydrogenase [Thermoanaerobacter ethanolicus CCSD1]
Length = 254
Score = 33.5 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 22 GRLMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLE 81
+ I ++ D G++ + ILG+ GI++ + + + A L + V E
Sbjct: 173 SKYYIRLIAFDKPGVMSKITGILGDKGISLLS-VVQKGVLGDTAEIVLITHIANTGKVFE 231
Query: 82 KLSVNVTIRFVKQFE 96
L ++ V+ E
Sbjct: 232 ALEEIQNLKEVECIE 246
>gi|154685725|ref|YP_001420886.1| formyltetrahydrofolate deformylase [Bacillus amyloliquefaciens
FZB42]
gi|154351576|gb|ABS73655.1| YkkE [Bacillus amyloliquefaciens FZB42]
Length = 300
Score = 33.5 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 15/49 (30%), Gaps = 1/49 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGIN-IAHFHLGRSQSTEHAISFLCID 72
+ + D GIV V L E+G N I + D
Sbjct: 21 RLLVSCPDQPGIVSAVSAFLFEHGANIIESNQYTTDPEGGRFFLRIEFD 69
>gi|118575808|ref|YP_875551.1| acetolactate synthase, small (regulatory) subunit [Cenarchaeum
symbiosum A]
gi|118194329|gb|ABK77247.1| acetolactate synthase, small (regulatory) subunit [Cenarchaeum
symbiosum A]
Length = 162
Score = 33.5 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLEK 82
++ I+ + GI+ V ++ NI +G ++ E + + D + ++++
Sbjct: 6 ILSILVENKPGILFQVTHLFRSRNFNIDSISVGVTEDPEFSRMTITTYGDEKRIRQIVKQ 65
Query: 83 LSVNVTIRFVKQF 95
L + V+Q
Sbjct: 66 LDKMIDTVEVRQI 78
>gi|332112755|gb|EGJ12548.1| homoserine dehydrogenase [Rubrivivax benzoatilyticus JA2]
Length = 445
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Query: 32 DILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILN----SVLEKLSVNV 87
D G++ + IL E+ I+I S E + + + + L ++
Sbjct: 371 DQAGVLARITGILAEHDISIDAVLQRESAEGEKQTDLIILTHDTVEGRMRAALAQMQALP 430
Query: 88 TIR 90
T+
Sbjct: 431 TVL 433
>gi|330470475|ref|YP_004408218.1| amino acid-binding act domain-containing protein [Verrucosispora
maris AB-18-032]
gi|328813446|gb|AEB47618.1| amino acid-binding act domain protein [Verrucosispora maris
AB-18-032]
Length = 170
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 26 ICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKL 83
I ++ D GIV V +L G N+ + R A++ +C+ G V + L
Sbjct: 6 ITVIGRDRPGIVADVAEVLARLGANLTDSTMTRL-RGHFAMTLICV-GPSAAEVEDAL 61
>gi|282163302|ref|YP_003355687.1| hypothetical protein MCP_0632 [Methanocella paludicola SANAE]
gi|282155616|dbj|BAI60704.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 369
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 8/68 (11%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQST---EHAISFLCIDGSIL-NSVLEKLSVN 86
D G++ V ++ ++G NI + + ++ ++ + +++ L
Sbjct: 159 KDKPGVLRDVAGMVAKHGGNITYTQQFIVDKGDREGQSNVYMEVENVKDIDDLVKALEKL 218
Query: 87 VTIRFVKQ 94
++ V
Sbjct: 219 SLVQEVTL 226
>gi|237745853|ref|ZP_04576333.1| homoserine dehydrogenase [Oxalobacter formigenes HOxBLS]
gi|229377204|gb|EEO27295.1| homoserine dehydrogenase [Oxalobacter formigenes HOxBLS]
Length = 436
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 5/73 (6%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI----DGSILNSVLEKLSVN 86
D G++ + IL + I+I F E + + + +++ +EK+
Sbjct: 361 KDQPGVLADITRILADLQISIDAFLQKEPLEGETLVDIIILTHMTQEKNMDAAIEKVENL 420
Query: 87 VTIR-FVKQFEFN 98
T+ V +
Sbjct: 421 PTVMGKVTKIRLE 433
>gi|205373462|ref|ZP_03226265.1| hypothetical protein Bcoam_09275 [Bacillus coahuilensis m4-4]
Length = 271
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 29 VNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVT 88
+ + G++ + ++LG INI + + D I LE + +
Sbjct: 12 IQVNRPGLLGDIASLLGMLSINIVTINGVDEGRRGM-LLLAETDAQITR--LESILHTMD 68
Query: 89 IRFVKQFE 96
V +
Sbjct: 69 TINVTKIR 76
>gi|77456734|ref|YP_346239.1| phosphoserine phosphatase [Pseudomonas fluorescens Pf0-1]
gi|77380737|gb|ABA72250.1| putative phosphatase [Pseudomonas fluorescens Pf0-1]
Length = 404
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 25 MICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI-DGSILNSVLEKL 83
+I I D G+ + +L + G+NI + I D SVL+ +
Sbjct: 6 LINITGVDRPGLTAAITGVLAQGGVNILDIGQAVIHDMLSFGILVEIPDSEQGKSVLKDI 65
>gi|256845985|ref|ZP_05551443.1| GTP pyrophosphokinase [Fusobacterium sp. 3_1_36A2]
gi|256719544|gb|EEU33099.1| GTP pyrophosphokinase [Fusobacterium sp. 3_1_36A2]
Length = 724
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 8/67 (11%), Positives = 23/67 (34%), Gaps = 5/67 (7%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS-----VLEKLSV 85
D I++ + +++ + INI + + + + I I ++ +
Sbjct: 656 NDRPNILMEIVSLIANHKINITSLNSYEVKKDGDRVVKVKISIEIKAKTEYDYLINNILK 715
Query: 86 NVTIRFV 92
+ V
Sbjct: 716 LKDVISV 722
>gi|237742590|ref|ZP_04573071.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 4_1_13]
gi|294784891|ref|ZP_06750179.1| GTP diphosphokinase [Fusobacterium sp. 3_1_27]
gi|229430238|gb|EEO40450.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 4_1_13]
gi|294486605|gb|EFG33967.1| GTP diphosphokinase [Fusobacterium sp. 3_1_27]
Length = 724
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 8/67 (11%), Positives = 23/67 (34%), Gaps = 5/67 (7%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNS-----VLEKLSV 85
D I++ + +++ + INI + + + + I I ++ +
Sbjct: 656 NDRPNILMEIVSLIANHKINITSLNSYEVKKDGDRVVKVKISIEIKAKTEYDYLINNILK 715
Query: 86 NVTIRFV 92
+ V
Sbjct: 716 LKDVISV 722
>gi|197337166|ref|YP_002158422.1| transcriptional regulatory protein TyrR [Vibrio fischeri MJ11]
gi|197314418|gb|ACH63867.1| transcriptional regulatory protein TyrR [Vibrio fischeri MJ11]
Length = 515
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + +S ++F ID + ++ K+ +
Sbjct: 8 KDRLGLTRELLDILASQHIDLRDIEI--DKSGLIYLNFPEIDFDEFSQLMAKIRRLDGVM 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|59713934|ref|YP_206709.1| DNA-binding transcriptional regulator, tyrosine-binding [Vibrio
fischeri ES114]
gi|59482182|gb|AAW87821.1| DNA-binding transcriptional regulator, tyrosine-binding [Vibrio
fischeri ES114]
Length = 515
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 31 ADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCIDGSILNSVLEKLSVNVTIR 90
D LG+ + +IL I++ + +S ++F ID + ++ K+ +
Sbjct: 8 KDRLGLTRELLDILASQHIDLRDIEI--DKSGLIYLNFPEIDFDEFSQLMAKIRRLDGVM 65
Query: 91 FVKQFEF 97
V++ +F
Sbjct: 66 DVRKIQF 72
>gi|39997008|ref|NP_952959.1| acetolactate synthase 3 regulatory subunit [Geobacter
sulfurreducens PCA]
gi|39983896|gb|AAR35286.1| acetolactate synthase, small subunit [Geobacter sulfurreducens
PCA]
gi|298506025|gb|ADI84748.1| acetolactate synthase, small subunit [Geobacter sulfurreducens
KN400]
Length = 163
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 24 LMICIVNADILGIVVFVGNILGEYGINIAHFHLGRSQSTEHAISFLCI--DGSILNSVLE 81
I ++ + G++ V + G NI + + + + D IL + +
Sbjct: 3 HTITVLVENEFGVLSRVAGLFSGRGFNIDSLSVAPTNDESISRMTIVTRGDDQILEQITK 62
Query: 82 KLSVNVTIRFV 92
+L+ + + V
Sbjct: 63 QLNKLIDVIKV 73
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.312 0.178 0.493
Lambda K H
0.267 0.0544 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,231,377,911
Number of Sequences: 13984884
Number of extensions: 52607167
Number of successful extensions: 240436
Number of sequences better than 10.0: 6005
Number of HSP's better than 10.0 without gapping: 3421
Number of HSP's successfully gapped in prelim test: 2584
Number of HSP's that attempted gapping in prelim test: 235453
Number of HSP's gapped (non-prelim): 6426
length of query: 100
length of database: 4,792,584,752
effective HSP length: 69
effective length of query: 31
effective length of database: 3,827,627,756
effective search space: 118656460436
effective search space used: 118656460436
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.5 bits)
S2: 76 (33.5 bits)