Query 537021.9.peg.34_1 Match_columns 208 No_of_seqs 193 out of 5626 Neff 6.0 Searched_HMMs 13730 Date Sun May 22 21:15:07 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_34.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1gdha1 c.2.1.4 (A:101-291) D- 100.0 1E-31 7.6E-36 216.0 6.3 83 1-83 109-191 (191) 2 d1ygya1 c.2.1.4 (A:99-282) Pho 100.0 1.3E-31 9.4E-36 215.4 6.3 81 1-81 104-184 (184) 3 d2naca1 c.2.1.4 (A:148-335) Fo 100.0 2.8E-30 2E-34 207.1 6.9 82 1-82 106-188 (188) 4 d1dxya1 c.2.1.4 (A:101-299) D- 100.0 1.4E-29 1E-33 202.7 5.5 83 1-83 103-199 (199) 5 d1mx3a1 c.2.1.4 (A:126-318) Tr 100.0 3.3E-29 2.4E-33 200.3 5.7 82 1-82 110-193 (193) 6 d1sc6a1 c.2.1.4 (A:108-295) Ph 99.9 5.6E-29 4.1E-33 198.9 5.9 82 1-82 102-188 (188) 7 d1qp8a1 c.2.1.4 (A:83-263) Put 99.9 2.5E-28 1.8E-32 194.9 6.0 82 1-82 98-181 (181) 8 d1j4aa1 c.2.1.4 (A:104-300) D- 99.9 4.8E-28 3.5E-32 193.1 5.7 82 1-82 102-197 (197) 9 d1ygya4 d.81.2.2 (A:317-451) D 99.9 4.2E-23 3E-27 162.2 9.4 88 120-207 3-91 (135) 10 d1li4a1 c.2.1.4 (A:190-352) S- 96.6 0.00037 2.7E-08 43.6 2.1 58 2-59 82-140 (163) 11 d1j3ba1 c.91.1.1 (A:212-529) P 93.2 0.11 8E-06 28.2 6.0 99 3-104 188-300 (318) 12 d1ii2a1 c.91.1.1 (A:201-523) P 91.3 0.18 1.3E-05 26.8 5.2 95 3-100 188-297 (323) 13 d2olra1 c.91.1.1 (A:228-540) P 88.1 0.79 5.8E-05 22.8 7.0 98 4-104 188-295 (313) 14 d1v8ba1 c.2.1.4 (A:235-397) S- 80.7 0.72 5.2E-05 23.1 3.4 35 9-43 88-123 (163) 15 d1pjca1 c.2.1.4 (A:136-303) L- 77.7 0.71 5.2E-05 23.1 2.7 26 7-32 108-133 (168) 16 d1l7da1 c.2.1.4 (A:144-326) Ni 75.0 0.88 6.4E-05 22.5 2.6 21 11-31 131-151 (183) 17 d2iafa1 d.81.2.1 (A:4-148) L-s 72.5 2.9 0.00021 19.3 4.9 52 138-189 18-70 (145) 18 d2cqea1 g.66.1.1 (A:458-513) Z 45.7 1.9 0.00013 20.5 -0.2 14 2-15 22-35 (56) 19 d2ax3a1 c.72.1.4 (A:212-489) H 41.7 4 0.00029 18.4 1.0 60 22-82 97-158 (278) 20 d2rlda1 a.29.16.1 (A:1-115) Un 34.1 13 0.00094 15.2 2.9 49 89-137 42-90 (115) 21 d2duya1 a.60.2.7 (A:11-75) Unc 20.8 16 0.0012 14.6 1.2 38 92-129 26-63 (65) 22 d1l7da2 c.23.12.2 (A:1-143,A:3 20.8 23 0.0016 13.7 4.9 37 18-56 87-123 (194) No 1 >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} Probab=99.97 E-value=1e-31 Score=215.99 Aligned_cols=83 Identities=37% Similarity=0.680 Sum_probs=81.4 Q ss_pred CCCCCCHHHHCCCCHHHHHHCCCCEEEEECCCCHHCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHCCCCCHHHCCC Q ss_conf 95779845707558799983899809998485022148897632213564014323753113233201045420021020 Q 537021.9.peg.3 1 LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEVEPALQNPLFGLPNVFCAPYL 80 (208) Q Consensus 1 lH~Plt~~T~~li~~~~l~~mk~g~~lIN~aRG~ivde~aL~~aL~~g~i~~aalDV~~~EP~~~~~l~~~~nvi~TPHi 80 (208) +|+|+|++|++|||++.|++||+|++|||+|||++|||+||+++|++|+|+||++|||+.||++++||+++|||++|||+ T Consensus 109 l~~plt~~T~~li~~~~l~~mk~~a~lIN~sRG~ivde~aL~~aL~~g~i~~a~lDV~~~EP~~~~~l~~~~nvi~TPHi 188 (191) T d1gdha1 109 LNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNTFLFPHI 188 (191) T ss_dssp ECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECSSC T ss_pred ECCCCCCHHHHEECHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCCCCEEECCCC T ss_conf 41799905753526888628487607996578630103899999983994489997899999998157749999989810 Q ss_pred CCC Q ss_conf 101 Q 537021.9.peg.3 81 GAS 83 (208) Q Consensus 81 ga~ 83 (208) |++ T Consensus 189 asa 191 (191) T d1gdha1 189 GSA 191 (191) T ss_dssp TTC T ss_pred CCC T ss_conf 038 No 2 >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} Probab=99.97 E-value=1.3e-31 Score=215.40 Aligned_cols=81 Identities=53% Similarity=0.885 Sum_probs=79.8 Q ss_pred CCCCCCHHHHCCCCHHHHHHCCCCEEEEECCCCHHCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHCCCCCHHHCCC Q ss_conf 95779845707558799983899809998485022148897632213564014323753113233201045420021020 Q 537021.9.peg.3 1 LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEVEPALQNPLFGLPNVFCAPYL 80 (208) Q Consensus 1 lH~Plt~~T~~li~~~~l~~mk~g~~lIN~aRG~ivde~aL~~aL~~g~i~~aalDV~~~EP~~~~~l~~~~nvi~TPHi 80 (208) +|+|||++|+||||++.|++||+|++|||+|||++|||+||+++|++|+|+|||||||+.||++++||+++|||++|||| T Consensus 104 ~~~Plt~~T~~lin~~~l~~mk~~a~lIN~sRG~iVde~aL~~aL~~~~i~~a~lDV~~~EP~~~~~l~~~~nviiTPHI 183 (184) T d1ygya1 104 VHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHL 183 (184) T ss_dssp ECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSC T ss_pred ECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHCCCCEEECCCC T ss_conf 73799800101106999751188756998343132404899998753937699984999999999647649999977997 Q ss_pred C Q ss_conf 1 Q 537021.9.peg.3 81 G 81 (208) Q Consensus 81 g 81 (208) | T Consensus 184 G 184 (184) T d1ygya1 184 G 184 (184) T ss_dssp S T ss_pred C T ss_conf 9 No 3 >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} Probab=99.96 E-value=2.8e-30 Score=207.09 Aligned_cols=82 Identities=34% Similarity=0.508 Sum_probs=79.6 Q ss_pred CCCCCCHHHHCCCCHHHHHHCCCCEEEEECCCCHHCCHHHHHHHHCCCCCCEEEECCCCCCC-CCCCHHHCCCCCHHHCC Q ss_conf 95779845707558799983899809998485022148897632213564014323753113-23320104542002102 Q 537021.9.peg.3 1 LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEVEP-ALQNPLFGLPNVFCAPY 79 (208) Q Consensus 1 lH~Plt~~T~~li~~~~l~~mk~g~~lIN~aRG~ivde~aL~~aL~~g~i~~aalDV~~~EP-~~~~~l~~~~nvi~TPH 79 (208) +|+|||++|++|||++.|++||+|++|||+|||++|||+||+++|++|+++||+||||+.|| +.++||+++||+++||| T Consensus 106 ~~~plt~~T~~li~~~~l~~mk~ga~lIN~aRG~ivd~~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~l~~~~nv~~TPH 185 (188) T d2naca1 106 LNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPH 185 (188) T ss_dssp ECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCS T ss_pred HCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHCCCCEEECCC T ss_conf 10234455333327999985799988996271655129999999857971369994799999999995781998687655 Q ss_pred CCC Q ss_conf 010 Q 537021.9.peg.3 80 LGA 82 (208) Q Consensus 80 iga 82 (208) +|| T Consensus 186 iaG 188 (188) T d2naca1 186 ISG 188 (188) T ss_dssp CTT T ss_pred CCC T ss_conf 281 No 4 >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} Probab=99.95 E-value=1.4e-29 Score=202.68 Aligned_cols=83 Identities=36% Similarity=0.605 Sum_probs=78.5 Q ss_pred CCCCCCHHHHCCCCHHHHHHCCCCEEEEECCCCHHCCHHHHHHHHCCCCCCEEEECCCCCCCC--------------CCC Q ss_conf 957798457075587999838998099984850221488976322135640143237531132--------------332 Q 537021.9.peg.3 1 LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEVEPA--------------LQN 66 (208) Q Consensus 1 lH~Plt~~T~~li~~~~l~~mk~g~~lIN~aRG~ivde~aL~~aL~~g~i~~aalDV~~~EP~--------------~~~ 66 (208) +|+|+|++|++|||++.|++||+|++|||+|||++|||+||+++|++|+|+||+||||+.||+ ..+ T Consensus 103 ~~~plt~~T~~li~~~~l~~mk~~a~lIN~aRG~vvde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~~~~~~~~~~p~~~ 182 (199) T d1dxya1 103 LHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWD 182 (199) T ss_dssp ECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHH T ss_pred EEECCCCCCCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHCCCCCCCCCHHHH T ss_conf 21001223211125887622477428995164766426888989863971047634667789631100102444570247 Q ss_pred HHHCCCCCHHHCCCCCC Q ss_conf 01045420021020101 Q 537021.9.peg.3 67 PLFGLPNVFCAPYLGAS 83 (208) Q Consensus 67 ~l~~~~nvi~TPHiga~ 83 (208) +|+++|||++|||+|++ T Consensus 183 ~L~~~~nviiTPHiagy 199 (199) T d1dxya1 183 ELLGMPNVVLSPHIAYY 199 (199) T ss_dssp HHHTCTTEEECSSCTTC T ss_pred HHHCCCCEEECCCCCCC T ss_conf 77259999988851449 No 5 >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} Probab=99.95 E-value=3.3e-29 Score=200.32 Aligned_cols=82 Identities=39% Similarity=0.670 Sum_probs=78.8 Q ss_pred CCCCCCHHHHCCCCHHHHHHCCCCEEEEECCCCHHCCHHHHHHHHCCCCCCEEEECCCCCCCC--CCCHHHCCCCCHHHC Q ss_conf 957798457075587999838998099984850221488976322135640143237531132--332010454200210 Q 537021.9.peg.3 1 LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEVEPA--LQNPLFGLPNVFCAP 78 (208) Q Consensus 1 lH~Plt~~T~~li~~~~l~~mk~g~~lIN~aRG~ivde~aL~~aL~~g~i~~aalDV~~~EP~--~~~~l~~~~nvi~TP 78 (208) +|+|+|++|++|||++.|++||+|++|||+|||++|||+||+++|++|+++||++|||+.||. .++||+++|||++|| T Consensus 110 ~~~plt~~T~~li~~~~l~~mk~~a~lIN~sRG~ivde~aL~~aL~~~~i~~a~lDV~~~EP~~~~~~~l~~~~nvi~TP 189 (193) T d1mx3a1 110 LHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTP 189 (193) T ss_dssp ECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECS T ss_pred EEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEECHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCCCEEECC T ss_conf 84011333102466899732399976994378229949999999972981289998389889987760677499999737 Q ss_pred CCCC Q ss_conf 2010 Q 537021.9.peg.3 79 YLGA 82 (208) Q Consensus 79 Higa 82 (208) |+|+ T Consensus 190 HiA~ 193 (193) T d1mx3a1 190 HAAW 193 (193) T ss_dssp SCTT T ss_pred CCCC T ss_conf 7484 No 6 >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} Probab=99.95 E-value=5.6e-29 Score=198.91 Aligned_cols=82 Identities=44% Similarity=0.677 Sum_probs=78.6 Q ss_pred CCCCCCHHHHCCCCHHHHHHCCCCEEEEECCCCHHCCHHHHHHHHCCCCCCEEEECCCCCCCC-----CCCHHHCCCCCH Q ss_conf 957798457075587999838998099984850221488976322135640143237531132-----332010454200 Q 537021.9.peg.3 1 LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEVEPA-----LQNPLFGLPNVF 75 (208) Q Consensus 1 lH~Plt~~T~~li~~~~l~~mk~g~~lIN~aRG~ivde~aL~~aL~~g~i~~aalDV~~~EP~-----~~~~l~~~~nvi 75 (208) +|+|||++|++|||++.|++||+|++|||+|||++|||+||+++|++|++++|++|||+.||. ..+||+++|||+ T Consensus 102 i~~plt~~T~~li~~~~l~~mk~~a~lIN~aRG~lvde~aL~~aL~~~~~~~a~lDV~~~EP~~~~~~~~~~l~~~~nv~ 181 (188) T d1sc6a1 102 LHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVL 181 (188) T ss_dssp ECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEE T ss_pred ECCCCCCCHHHHCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCEE T ss_conf 40457700243106999960799978997672786410899999976983289996589888876773210575399999 Q ss_pred HHCCCCC Q ss_conf 2102010 Q 537021.9.peg.3 76 CAPYLGA 82 (208) Q Consensus 76 ~TPHiga 82 (208) +|||+|| T Consensus 182 ~TPHiaG 188 (188) T d1sc6a1 182 LTPHIGG 188 (188) T ss_dssp EECCCSC T ss_pred ECCCCCC T ss_conf 7477481 No 7 >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Probab=99.94 E-value=2.5e-28 Score=194.85 Aligned_cols=82 Identities=21% Similarity=0.390 Sum_probs=78.5 Q ss_pred CCCCCCHHHHCCCCHHHHHHCCCCEEEEECCCCHHCCHHHHHHHHCCCCCCEEEECCCCCCC--CCCCHHHCCCCCHHHC Q ss_conf 95779845707558799983899809998485022148897632213564014323753113--2332010454200210 Q 537021.9.peg.3 1 LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEVEP--ALQNPLFGLPNVFCAP 78 (208) Q Consensus 1 lH~Plt~~T~~li~~~~l~~mk~g~~lIN~aRG~ivde~aL~~aL~~g~i~~aalDV~~~EP--~~~~~l~~~~nvi~TP 78 (208) +|+|+|++|++|||++.|++||+|++|||+|||++|||+||+++|++|++++|++|||+.|| +.++||+++|||++|| T Consensus 98 ~~~pl~~~t~~li~~~~l~~mk~~ailIN~~RG~ivd~~aL~~aL~~~~i~~aalDV~~~e~p~~~~~~l~~~~nvi~TP 177 (181) T d1qp8a1 98 CALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATP 177 (181) T ss_dssp ECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECC T ss_pred CCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCEEECC T ss_conf 01212224421110011320125406874154101120322101245858899996489999999997477199999666 Q ss_pred CCCC Q ss_conf 2010 Q 537021.9.peg.3 79 YLGA 82 (208) Q Consensus 79 Higa 82 (208) |+|| T Consensus 178 HiaG 181 (181) T d1qp8a1 178 WVAG 181 (181) T ss_dssp SCSS T ss_pred CCCC T ss_conf 4070 No 8 >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} Probab=99.94 E-value=4.8e-28 Score=193.08 Aligned_cols=82 Identities=35% Similarity=0.516 Sum_probs=77.2 Q ss_pred CCCCCCHHHHCCCCHHHHHHCCCCEEEEECCCCHHCCHHHHHHHHCCCCCCEEEECCCCCCCC--------------CCC Q ss_conf 957798457075587999838998099984850221488976322135640143237531132--------------332 Q 537021.9.peg.3 1 LHVPLTNKTKNILNKENLSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFDVFEVEPA--------------LQN 66 (208) Q Consensus 1 lH~Plt~~T~~li~~~~l~~mk~g~~lIN~aRG~ivde~aL~~aL~~g~i~~aalDV~~~EP~--------------~~~ 66 (208) +|+|+|++|++|||++.|++||+|++|||+|||++|||+||+++|++|+++||++|||+.||. .++ T Consensus 102 ~~~plt~~T~~li~~~~l~~mk~~a~lIN~sRG~ivde~aL~~aL~~~~i~~a~lDV~~~Ep~~~~~~~~~~~~p~~~~~ 181 (197) T d1j4aa1 102 LHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLA 181 (197) T ss_dssp ECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHH T ss_pred CCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCHH T ss_conf 34874223334345899863077427973474311016999999853611012554353677654321112348760000 Q ss_pred HHHCCCCCHHHCCCCC Q ss_conf 0104542002102010 Q 537021.9.peg.3 67 PLFGLPNVFCAPYLGA 82 (208) Q Consensus 67 ~l~~~~nvi~TPHiga 82 (208) +|+++|||++|||+|+ T Consensus 182 ~L~~~~nviiTPHiA~ 197 (197) T d1j4aa1 182 DLIARPNVLVTPKTAF 197 (197) T ss_dssp HHHHCTTEEECSSCTT T ss_pred HHHCCCCEEECCCCCC T ss_conf 4652999996765170 No 9 >d1ygya4 d.81.2.2 (A:317-451) D-3-phosphoglycerate dehydrogenase SerA {Mycobacterium tuberculosis [TaxId: 1773]} Probab=99.88 E-value=4.2e-23 Score=162.17 Aligned_cols=88 Identities=23% Similarity=0.318 Sum_probs=82.9 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHH-HCCCCCCEEEHHHHHHHCCEEE Q ss_conf 454665369999999999999972588514899981430111434789999999886-4067861677889999559089 Q 537021.9.peg.3 120 EEAPLVKPFMTLADHLGCFIGQLISESIQEIQIIYDGSTAVMNTMVLNSAVLAGIVR-VWRVGANIISAPIIIKENAIIL 198 (208) Q Consensus 120 ~~~~~~~pyl~LaekLG~l~~ql~~~~~~~I~i~~~G~la~~~t~~l~~a~lkGlL~-~~~~~VN~VNA~~iA~erGI~v 198 (208) +..+.++||++|+||||+|++|+.++++++|+|+|+|++++.++++++.++|||+|. ...++||||||+.+|+||||++ T Consensus 3 ~~~~~l~Pyl~LaekLG~~~~ql~~~~~~~i~I~~~G~~a~~~~~~lt~a~l~G~L~~~~~~~VN~VNA~~iAkerGI~v 82 (135) T d1ygya4 3 VVNEEVAPWLDLVRKLGVLAGVLSDELPVSLSVQVRGELAAEEVEVLRLSALRGLFSAVIEDAVTFVNAPALAAERGVTA 82 (135) T ss_dssp TSCTTTTTHHHHHHHHHHHHHHTSSSCCSEEEEEEEEGGGGSCCHHHHHHHHHHHTGGGSCTTCCCCCHHHHHHHHSCEE T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEE T ss_conf 35410200899999999999998089985999999854100245678999999877424666520301999999859989 Q ss_pred EEEEECCCC Q ss_conf 999603568 Q 537021.9.peg.3 199 STIKRDKSG 207 (208) Q Consensus 199 ~e~~~~~sG 207 (208) +++++++++ T Consensus 83 ~~~~~~~~~ 91 (135) T d1ygya4 83 EICKASESP 91 (135) T ss_dssp EEEEESCCS T ss_pred EEEECCCCC T ss_conf 999877788 No 10 >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Probab=96.62 E-value=0.00037 Score=43.61 Aligned_cols=58 Identities=14% Similarity=0.053 Sum_probs=47.8 Q ss_pred CCCCCHHHHCCCCHHHHHHCCCCEEEEEC-CCCHHCCHHHHHHHHCCCCCCEEEECCCC Q ss_conf 57798457075587999838998099984-85022148897632213564014323753 Q 537021.9.peg.3 2 HVPLTNKTKNILNKENLSKTKSGVCIINC-ARGGLVDENALAELLQSGHVAEAGFDVFE 59 (208) Q Consensus 2 H~Plt~~T~~li~~~~l~~mk~g~~lIN~-aRG~ivde~aL~~aL~~g~i~~aalDV~~ 59 (208) |++.+..++++|+.+.|.+||+|++|.|+ .+..-||-++|.+...+.+.....+|.|. T Consensus 82 ivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd~EId~~~L~~~~~~~~~v~~~v~~y~ 140 (163) T d1li4a1 82 IFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNENAVEKVNIKPQVDRYR 140 (163) T ss_dssp EEEECSSCSCSBCHHHHTTCCTTEEEEECSSSTTSBCHHHHHHHCSEEEEEETTEEEEE T ss_pred EEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCEECHHHHHHCCCEEEEECCCEEEEE T ss_conf 88743787630339999855698199971456531168888403300354158704999 No 11 >d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]} Probab=93.23 E-value=0.11 Score=28.20 Aligned_cols=99 Identities=19% Similarity=0.234 Sum_probs=59.3 Q ss_pred CCCCHHHHCCCCHHHHHHCCCCEEEEECC----------CCHHCCHHHHHHHHCCCCCCEEEECCCCCCCCCC----CHH Q ss_conf 77984570755879998389980999848----------5022148897632213564014323753113233----201 Q 537021.9.peg.3 3 VPLTNKTKNILNKENLSKTKSGVCIINCA----------RGGLVDENALAELLQSGHVAEAGFDVFEVEPALQ----NPL 68 (208) Q Consensus 3 ~Plt~~T~~li~~~~l~~mk~g~~lIN~a----------RG~ivde~aL~~aL~~g~i~~aalDV~~~EP~~~----~~l 68 (208) +|+.+..+.-+=.+.+++-+..++||||+ |-.|-...++++|+-+|.+..+ -|...|... ..+ T Consensus 188 l~~~p~~ya~lL~~ki~~~~~~~~LvNTGW~Gg~yg~G~Ri~l~~TR~ii~aIl~G~l~~~---e~~~d~~Fgl~IP~~v 264 (318) T d1j3ba1 188 LPMHPGVYARMLGEKIRKHAPRVYLVNTGWTGGPYGVGYRFPLPVTRALLKAALSGALENV---PYRRDPVFGFEVPLEA 264 (318) T ss_dssp CSSCHHHHHHHHHHHHHHHCCEEEEEECSEESSSTTTSEECCHHHHHHHHHHHHHTGGGGS---CEEECTTTCCEEESCB T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC---CEEECCCCCEECCCCC T ss_conf 5437556899999999866974899704534555556885780436999999973965564---1587587785410468 Q ss_pred HCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC Q ss_conf 045420021020101399999999999999999860 Q 537021.9.peg.3 69 FGLPNVFCAPYLGASTVESQEKVAIQLAHQMSDYLI 104 (208) Q Consensus 69 ~~~~nvi~TPHiga~T~ea~~~~a~~~a~~i~~~l~ 104 (208) -+.|.-++.|...+...++.+..+...++.-++-|+ T Consensus 265 ~gV~~~iL~Pr~~W~d~~~Yd~~a~~L~~~F~eNFk 300 (318) T d1j3ba1 265 PGVPQELLNPRETWADKEAYDQQARKLARLFQENFQ 300 (318) T ss_dssp TTBCGGGGCGGGGSSCHHHHHHHHHHHHHHHHHHHH T ss_pred CCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 999857679857369999999999999999999999 No 12 >d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]} Probab=91.29 E-value=0.18 Score=26.78 Aligned_cols=95 Identities=16% Similarity=0.182 Sum_probs=57.0 Q ss_pred CCCCHHHHCCCCHHHHHHCCCCEEEEECC-----------CCHHCCHHHHHHHHCCCCCCEEEECCCCCCCCCC----CH Q ss_conf 77984570755879998389980999848-----------5022148897632213564014323753113233----20 Q 537021.9.peg.3 3 VPLTNKTKNILNKENLSKTKSGVCIINCA-----------RGGLVDENALAELLQSGHVAEAGFDVFEVEPALQ----NP 67 (208) Q Consensus 3 ~Plt~~T~~li~~~~l~~mk~g~~lIN~a-----------RG~ivde~aL~~aL~~g~i~~aalDV~~~EP~~~----~~ 67 (208) +|+.|..+.-+=.+.+++-+-.++||||+ |=.|=...++++|+-+|.+..+- |...|... .. T Consensus 188 l~~~p~~ya~~L~~~i~~~~~~~~LvNTGw~GG~yg~g~~Ri~l~~TR~iI~ail~G~L~~~e---~~~dp~Fgl~IP~~ 264 (323) T d1ii2a1 188 LVRHATFYGEQLAEKMQKHNSRVWLLNTGYAGGRADRGAKRMPLRVTRAIIDAIHDGTLDRTE---YEEYPGWGLHIPKY 264 (323) T ss_dssp CCSCHHHHHHHHHHHHHHHTCEEEEEECSEESSCGGGTCEECCHHHHHHHHHHHHSSSGGGSC---EEEETTTTEEEESC T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC---EEECCCCCEECCCC T ss_conf 322767899999999984696289982352354467787506838889999999838766647---69878779722173 Q ss_pred HHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH Q ss_conf 104542002102010139999999999999999 Q 537021.9.peg.3 68 LFGLPNVFCAPYLGASTVESQEKVAIQLAHQMS 100 (208) Q Consensus 68 l~~~~nvi~TPHiga~T~ea~~~~a~~~a~~i~ 100 (208) +-+.|.-++-|...+.-.++.++.+...++.-. T Consensus 265 ~~gVp~~iLnPr~tW~d~~~Yd~~a~~La~~F~ 297 (323) T d1ii2a1 265 VAKVPEHLLNPRKAWKDVRQFNETSKELVAMFQ 297 (323) T ss_dssp CTTSCHHHHSHHHHCSCHHHHHHHHHHHHHHHH T ss_pred CCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHH T ss_conf 899984766986626899999999999999999 No 13 >d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]} Probab=88.14 E-value=0.79 Score=22.82 Aligned_cols=98 Identities=15% Similarity=0.143 Sum_probs=43.4 Q ss_pred CCCHHHHCCCCHHHHHHCCCCEEEEECCC------CHHCCHHHHHHHHCCCCCCEEEECCCCCCCCCC----CHHHCCCC Q ss_conf 79845707558799983899809998485------022148897632213564014323753113233----20104542 Q 537021.9.peg.3 4 PLTNKTKNILNKENLSKTKSGVCIINCAR------GGLVDENALAELLQSGHVAEAGFDVFEVEPALQ----NPLFGLPN 73 (208) Q Consensus 4 Plt~~T~~li~~~~l~~mk~g~~lIN~aR------G~ivde~aL~~aL~~g~i~~aalDV~~~EP~~~----~~l~~~~n 73 (208) |+-+..+.-+=.+.+++-+-.++||||+= =.+-...++++++.+|.+..+ -|...|... ..+-+.|. T Consensus 188 ~~~p~~ya~lL~~ki~~~~~~v~LvNTGw~G~G~Ri~l~~TR~ii~ai~~G~l~~~---e~~~dp~Fgl~IP~~~~GV~~ 264 (313) T d2olra1 188 SLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRISIKDTRAIIDAILNGSLDNA---ETFTLPMFNLAIPTELPGVDT 264 (313) T ss_dssp SSCHHHHHHHHHHHHHHHTCEEEEEECSBCTTSSBCCHHHHHHHHHHHHHTHHHHS---CEEEETTTTEEEESCCTTSCG T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCC---CEEECCCCCEEEEEECCCCCH T ss_conf 66678899999999874697289981565578874777899999999985223544---357426446552324489874 Q ss_pred CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC Q ss_conf 0021020101399999999999999999860 Q 537021.9.peg.3 74 VFCAPYLGASTVESQEKVAIQLAHQMSDYLI 104 (208) Q Consensus 74 vi~TPHiga~T~ea~~~~a~~~a~~i~~~l~ 104 (208) -++-|...+...++.++.+...++...+-|+ T Consensus 265 ~iLnPr~tW~d~~~Yd~~a~~La~~F~eNFk 295 (313) T d2olra1 265 KILDPRNTYASPEQWQEKAETLAKLFIDNFD 295 (313) T ss_dssp GGGSGGGGSSSHHHHHHHHHHHHHHHHHHHG T ss_pred HHCCHHHHCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 4469856358999999999999999999998 No 14 >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Probab=80.68 E-value=0.72 Score=23.08 Aligned_cols=35 Identities=20% Similarity=0.216 Sum_probs=27.2 Q ss_pred HHCCCCHHHHHHCCCCEEEEECCCCH-HCCHHHHHH Q ss_conf 70755879998389980999848502-214889763 Q 537021.9.peg.3 9 TKNILNKENLSKTKSGVCIINCARGG-LVDENALAE 43 (208) Q Consensus 9 T~~li~~~~l~~mk~g~~lIN~aRG~-ivde~aL~~ 43 (208) .+++|+.+.|.+||+|+++-|+..-. -||-++|.+ T Consensus 88 n~~vI~~~h~~~MKdgaIl~N~GHfd~EIdv~~L~~ 123 (163) T d1v8ba1 88 NVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFN 123 (163) T ss_dssp SSSSBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHT T ss_pred CCCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHH T ss_conf 976334999997308829980133415542288885 No 15 >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Probab=77.74 E-value=0.71 Score=23.12 Aligned_cols=26 Identities=12% Similarity=0.298 Sum_probs=21.1 Q ss_pred HHHHCCCCHHHHHHCCCCEEEEECCC Q ss_conf 45707558799983899809998485 Q 537021.9.peg.3 7 NKTKNILNKENLSKTKSGVCIINCAR 32 (208) Q Consensus 7 ~~T~~li~~~~l~~mk~g~~lIN~aR 32 (208) +.+-.+|.++.++.||+|+++|..|= T Consensus 108 ~~aP~lIt~~mv~~Mk~GSVIVDvai 133 (168) T d1pjca1 108 RRAPILVPASLVEQMRTGSVIVDVAV 133 (168) T ss_dssp SSCCCCBCHHHHTTSCTTCEEEETTC T ss_pred CCCCEEECHHHHHHCCCCCEEEEEEC T ss_conf 64674425989951589968998443 No 16 >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Probab=75.02 E-value=0.88 Score=22.52 Aligned_cols=21 Identities=33% Similarity=0.520 Sum_probs=11.3 Q ss_pred CCCCHHHHHHCCCCEEEEECC Q ss_conf 755879998389980999848 Q 537021.9.peg.3 11 NILNKENLSKTKSGVCIINCA 31 (208) Q Consensus 11 ~li~~~~l~~mk~g~~lIN~a 31 (208) .+|+++.++.||+|+++|..| T Consensus 131 ~lit~~mv~~Mk~GSVIVDva 151 (183) T d1l7da1 131 VLITEEMVTKMKPGSVIIDLA 151 (183) T ss_dssp CCSCHHHHTTSCTTCEEEETT T ss_pred EEEHHHHHHHCCCCCEEEEEE T ss_conf 210589997358994899986 No 17 >d2iafa1 d.81.2.1 (A:4-148) L-serine dehydratase SdhL, N-terminal domain {Legionella pneumophila [TaxId: 446]} Probab=72.49 E-value=2.9 Score=19.32 Aligned_cols=52 Identities=15% Similarity=0.064 Sum_probs=35.4 Q ss_pred HHHHHHCCCCCEEEEEEECCCCCCCCHHHH-HHHHHHHHHHCCCCCCEEEHHH Q ss_conf 999972588514899981430111434789-9999998864067861677889 Q 537021.9.peg.3 138 FIGQLISESIQEIQIIYDGSTAVMNTMVLN-SAVLAGIVRVWRVGANIISAPI 189 (208) Q Consensus 138 l~~ql~~~~~~~I~i~~~G~la~~~t~~l~-~a~lkGlL~~~~~~VN~VNA~~ 189 (208) +..+..-..+.+|+|+.+|+++..-..--| .|++.||+....+.+..-+++. T Consensus 18 l~~~~~~~~~~~v~v~LyGSLa~TG~GHgTD~Av~~GL~G~~P~~~d~~~~~~ 70 (145) T d2iafa1 18 LEQKNLFDKTQRVKVELYGSLALTGKGHGTDKAILNGLENKAPETVDPASMIP 70 (145) T ss_dssp HHHTTCTTTCCEEEEEEEHHHHHTCTTSSHHHHHHHHTTTCCCC-----CHHH T ss_pred HHHCCCCCCCCEEEEEEEHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH T ss_conf 97673668862899998633342188667359999320599956448544699 No 18 >d2cqea1 g.66.1.1 (A:458-513) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]} Probab=45.75 E-value=1.9 Score=20.51 Aligned_cols=14 Identities=50% Similarity=0.895 Sum_probs=10.9 Q ss_pred CCCCCHHHHCCCCH Q ss_conf 57798457075587 Q 537021.9.peg.3 2 HVPLTNKTKNILNK 15 (208) Q Consensus 2 H~Plt~~T~~li~~ 15 (208) |.|||++|+.++.+ T Consensus 22 H~pLt~~t~~lL~K 35 (56) T d2cqea1 22 HDPLTEETRELLDK 35 (56) T ss_dssp CCCCCHHHHHHHHH T ss_pred CCCCCHHHHHHHHH T ss_conf 78657899999999 No 19 >d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Probab=41.66 E-value=4 Score=18.42 Aligned_cols=60 Identities=17% Similarity=0.071 Sum_probs=26.5 Q ss_pred CCCEEEEECCCCHHCCHHH-HHHHHCCCCCCEEEECCCCCCCCCCCHHHCCC-CCHHHCCCCC Q ss_conf 9980999848502214889-76322135640143237531132332010454-2002102010 Q 537021.9.peg.3 22 KSGVCIINCARGGLVDENA-LAELLQSGHVAEAGFDVFEVEPALQNPLFGLP-NVFCAPYLGA 82 (208) Q Consensus 22 k~g~~lIN~aRG~ivde~a-L~~aL~~g~i~~aalDV~~~EP~~~~~l~~~~-nvi~TPHiga 82 (208) +-++++|...-|.--.... +.+.+..... ...+|--.--....+.+.+.+ ++|+|||.|= T Consensus 97 ~~~a~~iGpGlg~~~~~~~~~~~~~~~~~~-~~vldadal~~~~~~~l~~~~~~~IlTPH~gE 158 (278) T d2ax3a1 97 DVDVVAIGPGLGNNEHVREFVNEFLKTLEK-PAVIDADAINVLDTSVLKERKSPAVLTPHPGE 158 (278) T ss_dssp TCSEEEECTTCCCSHHHHHHHHHHHHHCCS-CEEECHHHHHTCCHHHHHTCSSCEEECCCHHH T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHCCCH-HEECCHHHHHHHHHHHHHHCCCCEEECCCHHH T ss_conf 677788658853306788778988750011-10010466655445555513787785787737 No 20 >d2rlda1 a.29.16.1 (A:1-115) Uncharacterized protein BT0352 {Bacteroides thetaiotaomicron [TaxId: 818]} Probab=34.08 E-value=13 Score=15.22 Aligned_cols=49 Identities=10% Similarity=0.072 Sum_probs=40.8 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 9999999999999860388620010001344454665369999999999 Q 537021.9.peg.3 89 EKVAIQLAHQMSDYLIDGVVSNALNMAIISFEEAPLVKPFMTLADHLGC 137 (208) Q Consensus 89 ~~~a~~~a~~i~~~l~~~~~~~~vN~p~~~~~~~~~~~pyl~LaekLG~ 137 (208) .|.+..+..||...........-++.-.+......+++.|+.|+.++|- T Consensus 42 ~Raa~SI~~NIaEg~~r~s~~d~~~fl~ia~gs~~E~~~~l~la~~~~~ 90 (115) T d2rlda1 42 LRSGTSIGANIREAEQAQSRADFINKLNIALKEANETEYWLELLIRTEY 90 (115) T ss_dssp HHHHHHHHHHHHHHTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 9998689999999880788799999999999899999999999998199 No 21 >d2duya1 a.60.2.7 (A:11-75) Uncharacterized protein TTHA1967 {Thermus thermophilus [TaxId: 274]} Probab=20.81 E-value=16 Score=14.59 Aligned_cols=38 Identities=16% Similarity=0.166 Sum_probs=28.7 Q ss_pred HHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHH Q ss_conf 99999999998603886200100013444546653699 Q 537021.9.peg.3 92 AIQLAHQMSDYLIDGVVSNALNMAIISFEEAPLVKPFM 129 (208) Q Consensus 92 a~~~a~~i~~~l~~~~~~~~vN~p~~~~~~~~~~~pyl 129 (208) +...|.+|+.|-.-..+..-..++.++...+..+++|+ T Consensus 26 g~~~A~~Iv~~R~f~s~edL~~v~gi~~~~~~~i~~~l 63 (65) T d2duya1 26 GPVLARRIVEGRPYARVEDLLKVKGIGPATLERLRPYL 63 (65) T ss_dssp CHHHHHHHHHTCCCSSGGGGGGSTTCCHHHHHHHGGGE T ss_pred CHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHC T ss_conf 99999999984898999999758898999999999772 No 22 >d1l7da2 c.23.12.2 (A:1-143,A:327-377) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Probab=20.77 E-value=23 Score=13.72 Aligned_cols=37 Identities=11% Similarity=0.242 Sum_probs=13.2 Q ss_pred HHHCCCCEEEEECCCCHHCCHHHHHHHHCCCCCCEEEEC Q ss_conf 983899809998485022148897632213564014323 Q 537021.9.peg.3 18 LSKTKSGVCIINCARGGLVDENALAELLQSGHVAEAGFD 56 (208) Q Consensus 18 l~~mk~g~~lIN~aRG~ivde~aL~~aL~~g~i~~aalD 56 (208) +++||+|.++|..-- -.+..+++++|.+.++...++| T Consensus 87 i~~lk~g~~li~~l~--p~~~~~~~~~l~~~~it~~a~e 123 (194) T d1l7da2 87 VALIKEGAVLMCHLG--ALTNRPVVEALTKRKITAYAME 123 (194) T ss_dssp GGGSCTTCEEEEECC--GGGCHHHHHHHHHTTCEEEEGG T ss_pred HHHCCCCEEEEEECC--CCCCHHHHHHHHHCCCEEEEEE T ss_conf 643267639998516--4446167789875673698500 Done!