Query 537021.9.peg.348_1 Match_columns 42 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 13730 Date Tue May 24 18:45:12 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_348.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 g1pyo.1 c.17.1.1 (A:,B:) Caspa 14.3 23 0.0016 15.9 0.6 28 3-30 49-76 (257) 2 d1m72a_ c.17.1.1 (A:) Caspase- 12.7 27 0.002 15.5 0.6 29 2-30 42-70 (256) 3 d1f1ja_ c.17.1.1 (A:) Caspase- 9.6 45 0.0033 14.4 0.9 27 3-29 33-59 (245) 4 g1qtn.1 c.17.1.1 (A:,B:) Caspa 9.4 39 0.0029 14.7 0.5 28 3-30 41-68 (242) 5 d2hmfa2 d.58.18.10 (A:404-470) 7.9 79 0.0058 13.1 2.2 18 4-21 50-67 (67) 6 d2a2pa1 c.47.1.23 (A:25-144) S 6.7 76 0.0056 13.2 1.0 11 25-35 11-21 (120) 7 g1sc3.1 c.17.1.1 (A:,B:) Inter 6.7 69 0.005 13.5 0.8 28 2-29 57-84 (261) 8 d1nw9b_ c.17.1.1 (B:) Caspase- 6.2 70 0.0051 13.4 0.6 27 3-29 44-70 (277) 9 g1nme.1 c.17.1.1 (A:,B:) Apopa 6.1 77 0.0056 13.2 0.8 27 3-29 39-65 (238) 10 d2cr9a1 d.297.1.1 (A:8-133) Po 5.5 1.1E+02 0.0078 12.5 2.0 20 6-26 89-108 (126) No 1 >g1pyo.1 c.17.1.1 (A:,B:) Caspase-2 {Human (Homo sapiens) [TaxId: 9606]} Probab=14.34 E-value=23 Score=15.91 Aligned_cols=28 Identities=14% Similarity=0.243 Sum_probs=23.0 Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 2467999999999997456541445311 Q 537021.9.peg.3 3 SDKDVERIFAVFKKIFFEKSIGKNLNGA 30 (42) Q Consensus 3 sdkdverifavfkkiffeksigknlnga 30 (42) +++|++++-.+|+++-|+-.+..||+.. T Consensus 49 ~~~Da~~l~~~l~~lGF~V~~~~nlt~~ 76 (257) T g1pyo.1 49 GDVDHSTLVTLFKLLGYDVHVLCDQTAQ 76 (257) T ss_dssp HHHHHHHHHHHHHHTTEEEEEEESCCHH T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCHH T ss_conf 5999999999999889989998569999 No 2 >d1m72a_ c.17.1.1 (A:) Caspase-1 {Fall armyworm (Spodoptera frugiperda) [TaxId: 7108]} Probab=12.74 E-value=27 Score=15.49 Aligned_cols=29 Identities=21% Similarity=0.338 Sum_probs=23.2 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 72467999999999997456541445311 Q 537021.9.peg.3 2 NSDKDVERIFAVFKKIFFEKSIGKNLNGA 30 (42) Q Consensus 2 nsdkdverifavfkkiffeksigknlnga 30 (42) ++++|++++-.+|+++=|+-.+..|++.. T Consensus 42 g~~~Da~~l~~~l~~lGF~V~~~~nlt~~ 70 (256) T d1m72a_ 42 GTNVDSDNLSKVLKTLGFKVTVFPNLKSE 70 (256) T ss_dssp THHHHHHHHHHHHHHTTCEEEEEESCCHH T ss_pred CHHHHHHHHHHHHHHCCCEEEEEECCCHH T ss_conf 84999999999999889989998388989 No 3 >d1f1ja_ c.17.1.1 (A:) Caspase-7 {Human (Homo sapiens) [TaxId: 9606]} Probab=9.58 E-value=45 Score=14.38 Aligned_cols=27 Identities=26% Similarity=0.491 Sum_probs=20.9 Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 246799999999999745654144531 Q 537021.9.peg.3 3 SDKDVERIFAVFKKIFFEKSIGKNLNG 29 (42) Q Consensus 3 sdkdverifavfkkiffeksigknlng 29 (42) +++|++++-.+|+++-|+-....|++. T Consensus 33 ~~~Da~~l~~~l~~lGF~V~~~~nl~~ 59 (245) T d1f1ja_ 33 TDKDAEALFKCFRSLGFDVIVYNDCSC 59 (245) T ss_dssp HHHHHHHHHHHHHHHTEEEEEEESCCH T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCH T ss_conf 499999999999987998999308999 No 4 >g1qtn.1 c.17.1.1 (A:,B:) Caspase-8 {Human (Homo sapiens) [TaxId: 9606]} Probab=9.37 E-value=39 Score=14.67 Aligned_cols=28 Identities=14% Similarity=0.234 Sum_probs=21.9 Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 2467999999999997456541445311 Q 537021.9.peg.3 3 SDKDVERIFAVFKKIFFEKSIGKNLNGA 30 (42) Q Consensus 3 sdkdverifavfkkiffeksigknlnga 30 (42) +++|++++-.+|+++=|+--+-.|++.. T Consensus 41 a~~Da~~l~~~l~~lGF~V~~~~nlt~~ 68 (242) T g1qtn.1 41 THLDAGALTTTFEELHFEIKPHDDCTVE 68 (242) T ss_dssp HHHHHHHHHHHHHHTTCEEEEEESCCHH T ss_pred HHHHHHHHHHHHHHCCCEEEECCCCCHH T ss_conf 0999999999999889889988689999 No 5 >d2hmfa2 d.58.18.10 (A:404-470) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]} Probab=7.92 E-value=79 Score=13.14 Aligned_cols=18 Identities=28% Similarity=0.429 Sum_probs=9.0 Q ss_pred HHHHHHHHHHHHHHHHHH Q ss_conf 467999999999997456 Q 537021.9.peg.3 4 DKDVERIFAVFKKIFFEK 21 (42) Q Consensus 4 dkdverifavfkkiffek 21 (42) ++|.++......+-|||+ T Consensus 50 ~~d~~~Av~~Lh~~F~~e 67 (67) T d2hmfa2 50 EKDLLNCVRKLHEKFIEK 67 (67) T ss_dssp GGGHHHHHHHHHHHHTTC T ss_pred HHHHHHHHHHHHHHHHCC T ss_conf 899999999999998569 No 6 >d2a2pa1 c.47.1.23 (A:25-144) Selenoprotein M {Mouse (Mus musculus) [TaxId: 10090]} Probab=6.74 E-value=76 Score=13.22 Aligned_cols=11 Identities=18% Similarity=0.549 Sum_probs=8.4 Q ss_pred CCCCCCEEEEE Q ss_conf 44531100101 Q 537021.9.peg.3 25 KNLNGAILNVC 35 (42) Q Consensus 25 knlngailnvc 35 (42) +.+..|+|.+| T Consensus 11 ~~~~rA~lE~C 21 (120) T d2a2pa1 11 RGLARGRVETC 21 (120) T ss_dssp TTCCEEEEEEE T ss_pred HHCCEEEEEEC T ss_conf 21010588737 No 7 >g1sc3.1 c.17.1.1 (A:,B:) Interleukin-1beta converting enzyme (a cysteine protease) {Human (Homo sapiens) [TaxId: 9606]} Probab=6.68 E-value=69 Score=13.46 Aligned_cols=28 Identities=14% Similarity=0.366 Sum_probs=20.3 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 7246799999999999745654144531 Q 537021.9.peg.3 2 NSDKDVERIFAVFKKIFFEKSIGKNLNG 29 (42) Q Consensus 2 nsdkdverifavfkkiffeksigknlng 29 (42) ++.+|++++-.+|+++-|+--+-+|+.. T Consensus 57 g~~~Da~~l~~~l~~lGF~V~~~~nlt~ 84 (261) T g1sc3.1 57 GAEVDITGMTMLLQNLGYSVDVKKNLTA 84 (261) T ss_dssp THHHHHHHHHHHHHHTTCEEEEEESCCH T ss_pred CHHHHHHHHHHHHHHCCCEEEEEECCCH T ss_conf 8399999999999987988999637987 No 8 >d1nw9b_ c.17.1.1 (B:) Caspase-9 {Human (Homo sapiens) [TaxId: 9606]} Probab=6.22 E-value=70 Score=13.41 Aligned_cols=27 Identities=22% Similarity=0.394 Sum_probs=20.6 Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 246799999999999745654144531 Q 537021.9.peg.3 3 SDKDVERIFAVFKKIFFEKSIGKNLNG 29 (42) Q Consensus 3 sdkdverifavfkkiffeksigknlng 29 (42) +++|++++-.+|+++=|+-.+-.|++. T Consensus 44 a~~Da~~l~~~l~~lGF~V~~~~nlt~ 70 (277) T d1nw9b_ 44 SNIDCEKLRRRFSSLHFMVEVKGDLTA 70 (277) T ss_dssp HHHHHHHHHHHHHHTTEEEEEEESCCH T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCH T ss_conf 199999999999888998999518999 No 9 >g1nme.1 c.17.1.1 (A:,B:) Apopain (caspase-3, cpp32) {Human (Homo sapiens) [TaxId: 9606]} Probab=6.14 E-value=77 Score=13.21 Aligned_cols=27 Identities=19% Similarity=0.354 Sum_probs=20.6 Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 246799999999999745654144531 Q 537021.9.peg.3 3 SDKDVERIFAVFKKIFFEKSIGKNLNG 29 (42) Q Consensus 3 sdkdverifavfkkiffeksigknlng 29 (42) +.+|++++-.+|+++=|+-.+..|+.. T Consensus 39 s~~Da~~l~~~l~~lGF~V~~~~nlt~ 65 (238) T g1nme.1 39 TDVDAANLRETFRNLKYEVRNKNDLTR 65 (238) T ss_dssp HHHHHHHHHHHHHHTTCEEEEEESCCH T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCCH T ss_conf 299999999999888998999727887 No 10 >d2cr9a1 d.297.1.1 (A:8-133) Poly [ADP-ribose] polymerase-1, PARP-1 {Human (Homo sapiens) [TaxId: 9606]} Probab=5.53 E-value=1.1e+02 Score=12.46 Aligned_cols=20 Identities=30% Similarity=0.476 Sum_probs=14.8 Q ss_pred HHHHHHHHHHHHHHHHHHCCC Q ss_conf 799999999999745654144 Q 537021.9.peg.3 6 DVERIFAVFKKIFFEKSIGKN 26 (42) Q Consensus 6 dverifavfkkiffeksigkn 26 (42) +.+....-|.+.|++|+ |.. T Consensus 89 ~~~~Ai~~F~kkF~~KT-gn~ 108 (126) T d2cr9a1 89 SKEDAIEHFMKLYEEKT-GNA 108 (126) T ss_dssp SHHHHHHHHHHHHHHHS-SSC T ss_pred CHHHHHHHHHHHHHHHH-CCC T ss_conf 99999999999999986-797 Done!