Query         537021.9.peg.348_1
Match_columns 42
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 13730
Date          Tue May 24 18:45:12 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_348.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 g1pyo.1 c.17.1.1 (A:,B:) Caspa  14.3      23  0.0016   15.9   0.6   28    3-30     49-76  (257)
  2 d1m72a_ c.17.1.1 (A:) Caspase-  12.7      27   0.002   15.5   0.6   29    2-30     42-70  (256)
  3 d1f1ja_ c.17.1.1 (A:) Caspase-   9.6      45  0.0033   14.4   0.9   27    3-29     33-59  (245)
  4 g1qtn.1 c.17.1.1 (A:,B:) Caspa   9.4      39  0.0029   14.7   0.5   28    3-30     41-68  (242)
  5 d2hmfa2 d.58.18.10 (A:404-470)   7.9      79  0.0058   13.1   2.2   18    4-21     50-67  (67)
  6 d2a2pa1 c.47.1.23 (A:25-144) S   6.7      76  0.0056   13.2   1.0   11   25-35     11-21  (120)
  7 g1sc3.1 c.17.1.1 (A:,B:) Inter   6.7      69   0.005   13.5   0.8   28    2-29     57-84  (261)
  8 d1nw9b_ c.17.1.1 (B:) Caspase-   6.2      70  0.0051   13.4   0.6   27    3-29     44-70  (277)
  9 g1nme.1 c.17.1.1 (A:,B:) Apopa   6.1      77  0.0056   13.2   0.8   27    3-29     39-65  (238)
 10 d2cr9a1 d.297.1.1 (A:8-133) Po   5.5 1.1E+02  0.0078   12.5   2.0   20    6-26     89-108 (126)

No 1  
>g1pyo.1 c.17.1.1 (A:,B:) Caspase-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.34  E-value=23  Score=15.91  Aligned_cols=28  Identities=14%  Similarity=0.243  Sum_probs=23.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             2467999999999997456541445311
Q 537021.9.peg.3    3 SDKDVERIFAVFKKIFFEKSIGKNLNGA   30 (42)
Q Consensus         3 sdkdverifavfkkiffeksigknlnga   30 (42)
                      +++|++++-.+|+++-|+-.+..||+..
T Consensus        49 ~~~Da~~l~~~l~~lGF~V~~~~nlt~~   76 (257)
T g1pyo.1          49 GDVDHSTLVTLFKLLGYDVHVLCDQTAQ   76 (257)
T ss_dssp             HHHHHHHHHHHHHHTTEEEEEEESCCHH
T ss_pred             CHHHHHHHHHHHHHCCCEEEEEECCCHH
T ss_conf             5999999999999889989998569999


No 2  
>d1m72a_ c.17.1.1 (A:) Caspase-1 {Fall armyworm (Spodoptera frugiperda) [TaxId: 7108]}
Probab=12.74  E-value=27  Score=15.49  Aligned_cols=29  Identities=21%  Similarity=0.338  Sum_probs=23.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             72467999999999997456541445311
Q 537021.9.peg.3    2 NSDKDVERIFAVFKKIFFEKSIGKNLNGA   30 (42)
Q Consensus         2 nsdkdverifavfkkiffeksigknlnga   30 (42)
                      ++++|++++-.+|+++=|+-.+..|++..
T Consensus        42 g~~~Da~~l~~~l~~lGF~V~~~~nlt~~   70 (256)
T d1m72a_          42 GTNVDSDNLSKVLKTLGFKVTVFPNLKSE   70 (256)
T ss_dssp             THHHHHHHHHHHHHHTTCEEEEEESCCHH
T ss_pred             CHHHHHHHHHHHHHHCCCEEEEEECCCHH
T ss_conf             84999999999999889989998388989


No 3  
>d1f1ja_ c.17.1.1 (A:) Caspase-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.58  E-value=45  Score=14.38  Aligned_cols=27  Identities=26%  Similarity=0.491  Sum_probs=20.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             246799999999999745654144531
Q 537021.9.peg.3    3 SDKDVERIFAVFKKIFFEKSIGKNLNG   29 (42)
Q Consensus         3 sdkdverifavfkkiffeksigknlng   29 (42)
                      +++|++++-.+|+++-|+-....|++.
T Consensus        33 ~~~Da~~l~~~l~~lGF~V~~~~nl~~   59 (245)
T d1f1ja_          33 TDKDAEALFKCFRSLGFDVIVYNDCSC   59 (245)
T ss_dssp             HHHHHHHHHHHHHHHTEEEEEEESCCH
T ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCCH
T ss_conf             499999999999987998999308999


No 4  
>g1qtn.1 c.17.1.1 (A:,B:) Caspase-8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.37  E-value=39  Score=14.67  Aligned_cols=28  Identities=14%  Similarity=0.234  Sum_probs=21.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             2467999999999997456541445311
Q 537021.9.peg.3    3 SDKDVERIFAVFKKIFFEKSIGKNLNGA   30 (42)
Q Consensus         3 sdkdverifavfkkiffeksigknlnga   30 (42)
                      +++|++++-.+|+++=|+--+-.|++..
T Consensus        41 a~~Da~~l~~~l~~lGF~V~~~~nlt~~   68 (242)
T g1qtn.1          41 THLDAGALTTTFEELHFEIKPHDDCTVE   68 (242)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEESCCHH
T ss_pred             HHHHHHHHHHHHHHCCCEEEECCCCCHH
T ss_conf             0999999999999889889988689999


No 5  
>d2hmfa2 d.58.18.10 (A:404-470) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]}
Probab=7.92  E-value=79  Score=13.14  Aligned_cols=18  Identities=28%  Similarity=0.429  Sum_probs=9.0

Q ss_pred             HHHHHHHHHHHHHHHHHH
Q ss_conf             467999999999997456
Q 537021.9.peg.3    4 DKDVERIFAVFKKIFFEK   21 (42)
Q Consensus         4 dkdverifavfkkiffek   21 (42)
                      ++|.++......+-|||+
T Consensus        50 ~~d~~~Av~~Lh~~F~~e   67 (67)
T d2hmfa2          50 EKDLLNCVRKLHEKFIEK   67 (67)
T ss_dssp             GGGHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHCC
T ss_conf             899999999999998569


No 6  
>d2a2pa1 c.47.1.23 (A:25-144) Selenoprotein M {Mouse (Mus musculus) [TaxId: 10090]}
Probab=6.74  E-value=76  Score=13.22  Aligned_cols=11  Identities=18%  Similarity=0.549  Sum_probs=8.4

Q ss_pred             CCCCCCEEEEE
Q ss_conf             44531100101
Q 537021.9.peg.3   25 KNLNGAILNVC   35 (42)
Q Consensus        25 knlngailnvc   35 (42)
                      +.+..|+|.+|
T Consensus        11 ~~~~rA~lE~C   21 (120)
T d2a2pa1          11 RGLARGRVETC   21 (120)
T ss_dssp             TTCCEEEEEEE
T ss_pred             HHCCEEEEEEC
T ss_conf             21010588737


No 7  
>g1sc3.1 c.17.1.1 (A:,B:) Interleukin-1beta converting enzyme (a cysteine protease) {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.68  E-value=69  Score=13.46  Aligned_cols=28  Identities=14%  Similarity=0.366  Sum_probs=20.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             7246799999999999745654144531
Q 537021.9.peg.3    2 NSDKDVERIFAVFKKIFFEKSIGKNLNG   29 (42)
Q Consensus         2 nsdkdverifavfkkiffeksigknlng   29 (42)
                      ++.+|++++-.+|+++-|+--+-+|+..
T Consensus        57 g~~~Da~~l~~~l~~lGF~V~~~~nlt~   84 (261)
T g1sc3.1          57 GAEVDITGMTMLLQNLGYSVDVKKNLTA   84 (261)
T ss_dssp             THHHHHHHHHHHHHHTTCEEEEEESCCH
T ss_pred             CHHHHHHHHHHHHHHCCCEEEEEECCCH
T ss_conf             8399999999999987988999637987


No 8  
>d1nw9b_ c.17.1.1 (B:) Caspase-9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.22  E-value=70  Score=13.41  Aligned_cols=27  Identities=22%  Similarity=0.394  Sum_probs=20.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             246799999999999745654144531
Q 537021.9.peg.3    3 SDKDVERIFAVFKKIFFEKSIGKNLNG   29 (42)
Q Consensus         3 sdkdverifavfkkiffeksigknlng   29 (42)
                      +++|++++-.+|+++=|+-.+-.|++.
T Consensus        44 a~~Da~~l~~~l~~lGF~V~~~~nlt~   70 (277)
T d1nw9b_          44 SNIDCEKLRRRFSSLHFMVEVKGDLTA   70 (277)
T ss_dssp             HHHHHHHHHHHHHHTTEEEEEEESCCH
T ss_pred             CHHHHHHHHHHHHHCCCEEEEEECCCH
T ss_conf             199999999999888998999518999


No 9  
>g1nme.1 c.17.1.1 (A:,B:) Apopain (caspase-3, cpp32) {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.14  E-value=77  Score=13.21  Aligned_cols=27  Identities=19%  Similarity=0.354  Sum_probs=20.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             246799999999999745654144531
Q 537021.9.peg.3    3 SDKDVERIFAVFKKIFFEKSIGKNLNG   29 (42)
Q Consensus         3 sdkdverifavfkkiffeksigknlng   29 (42)
                      +.+|++++-.+|+++=|+-.+..|+..
T Consensus        39 s~~Da~~l~~~l~~lGF~V~~~~nlt~   65 (238)
T g1nme.1          39 TDVDAANLRETFRNLKYEVRNKNDLTR   65 (238)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEESCCH
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEECCCH
T ss_conf             299999999999888998999727887


No 10 
>d2cr9a1 d.297.1.1 (A:8-133) Poly [ADP-ribose] polymerase-1, PARP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.53  E-value=1.1e+02  Score=12.46  Aligned_cols=20  Identities=30%  Similarity=0.476  Sum_probs=14.8

Q ss_pred             HHHHHHHHHHHHHHHHHHCCC
Q ss_conf             799999999999745654144
Q 537021.9.peg.3    6 DVERIFAVFKKIFFEKSIGKN   26 (42)
Q Consensus         6 dverifavfkkiffeksigkn   26 (42)
                      +.+....-|.+.|++|+ |..
T Consensus        89 ~~~~Ai~~F~kkF~~KT-gn~  108 (126)
T d2cr9a1          89 SKEDAIEHFMKLYEEKT-GNA  108 (126)
T ss_dssp             SHHHHHHHHHHHHHHHS-SSC
T ss_pred             CHHHHHHHHHHHHHHHH-CCC
T ss_conf             99999999999999986-797


Done!