RPS-BLAST 2.2.22 [Sep-27-2009]
Database: mmdb70
33,805 sequences; 4,956,049 total letters
Searching..................................................done
Query= 537021.9.peg.348_1
(42 letters)
***** No hits found ******
Database: mmdb70
Posted date: Jun 20, 2010 3:12 AM
Number of letters in database: 4,956,049
Number of sequences in database: 33,805
Lambda K H
0.328 0.144 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 301,138
Number of extensions: 7343
Number of successful extensions: 22
Number of sequences better than 10.0: 0
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 0
Length of query: 42
Length of database: 4,956,049
Length adjustment: 14
Effective length of query: 28
Effective length of database: 4,482,779
Effective search space: 125517812
Effective search space used: 125517812
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 50 (23.9 bits)