HHsearch alignment of GI: peg_393 and MMDB domain: 1ybd_A_
>1ybd_A (A:) Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, protein structure initiative, PSI; 2.60A {Neisseria meningitidis}
Probab=99.02 E-value=1.6e-09 Score=81.62 Aligned_cols=107 Identities=18% Similarity=0.161 Sum_probs=90.5
Q ss_pred HHHHCCCEEEEEECHHHHCCH-------HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCCCCH
Q ss_conf 998759889998675672474-------6899999999998518971799845724578899970898115578346612
Q 537021.9.peg.3 20 VQFYENETIVVKYGGHVMNCT-------DLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFENGLRITDQ 92 (150)
Q Consensus 20 i~~~r~ktiVIK~GG~~l~d~-------~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~v~G~RVTd~ 92 (150)
.++++.+++|||+||+++.|+ +...+++++|+.++..+.++++|||++.+.....+ ..+.+++
T Consensus 2 m~~~~~~~iViKiGGs~l~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~v~~~~~~~~~~~~----------~~~~~~~ 71 (239)
T 1ybd_A 2 TQQIKYKRVLLKLSGESLXGSDPFGINHDTIVQTVGEIAEVVKXGVQVGIVVGGGNIFRGVSA----------QAGSXDR 71 (239)
T ss_dssp --CCSCSEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHH----------HHTTSCH
T ss_pred CCCCCCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC----------CCCCCCC
T ss_conf 866647779999772134279998869999999999999999779979999434565564221----------2468764
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEE
Q ss_conf 48999999974166899999998289976877865589899997
Q 537021.9.peg.3 93 QTAEVVEMVLAGSINKKIVSLINQTGTQAIGICGKDGNMVFAEK 136 (150)
Q Consensus 93 ~tl~iv~~vL~G~vn~~lv~~L~~~g~~avglsg~dg~li~a~~ 136 (150)
.+++.+........|..++..|++.|+++.++++.+..++....
T Consensus 72 ~~~~~~~~~~~~~~~~ll~~~l~~~g~~a~~~~~~~~~~~~~~~ 115 (239)
T 1ybd_A 72 ATADYXGXXATVXNALALKDAFETLGIKARVQSALSXQQIAETY 115 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESSCBSSSCEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH
T ss_conf 12789999998999999999887548620100222114677677