HHsearch results for GI: peg_393 and protein with PDBid: 1ybd_A
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, protein structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=97.98 E-value=0.00022 Score=47.74 Aligned_cols=95 Identities=22% Similarity=0.227 Sum_probs=59.9
Q ss_pred HHHCCCEEEEEECHHHHC-------CHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCCCCHH
Q ss_conf 987598899986756724-------7468999999999985189717998457245788999708981155783466124
Q 537021.9.peg.3 21 QFYENETIVVKYGGHVMN-------CTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFENGLRITDQQ 93 (150)
Q Consensus 21 ~~~r~ktiVIK~GG~~l~-------d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~v~G~RVTd~~ 93 (150)
++.|-|.+|||+||+.+. |.+...+++++|+.|+..|..+++|+||+..-.......... +..
T Consensus 3 ~~~k~krIViKiGGs~l~~~~~~~i~~~~i~~ia~~I~~l~~~g~~vivVssGa~~~~~~~~~~~~~----------~~~ 72 (239)
T 1ybd_A 3 QQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVSAQAGSM----------DRA 72 (239)
T ss_dssp -CCSCSEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHTTS----------CHH
T ss_pred CCCCCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHCCC----------CCH
T ss_conf 6664776999977212117999886999999999999999977997999967875566303330478----------743
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 89999999741668999999982899768778
Q 537021.9.peg.3 94 TAEVVEMVLAGSINKKIVSLINQTGTQAIGIC 125 (150)
Q Consensus 94 tl~iv~~vL~G~vn~~lv~~L~~~g~~avgls 125 (150)
.............+......+...+..+....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (239)
T 1ybd_A 73 TADYMGMMATVMNALALKDAFETLGIKARVQS 104 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 79999999999999999999987687567401