Query 537021.9.peg.393_1
Match_columns 150
No_of_seqs 118 out of 1509
Neff 5.8
Searched_HMMs 13730
Date Wed May 25 00:41:31 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_393.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2bufa1 c.73.1.2 (A:2-301) N-a 100.0 1.2E-39 9E-44 272.2 15.2 149 1-149 2-163 (300)
2 d2ap9a1 c.73.1.2 (A:6-296) N-a 100.0 3E-33 2.2E-37 231.3 14.1 143 7-149 7-156 (291)
3 d2btya1 c.73.1.2 (A:1-282) N-a 100.0 4.3E-32 3.1E-36 223.9 14.3 141 9-149 5-147 (282)
4 d1e19a_ c.73.1.1 (A:) Carbamat 99.8 1.1E-20 7.7E-25 150.8 7.9 113 25-137 1-136 (313)
5 d1gs5a_ c.73.1.2 (A:) N-acetyl 99.8 1.9E-19 1.4E-23 142.8 12.8 123 26-148 3-126 (258)
6 d1b7ba_ c.73.1.1 (A:) Carbamat 99.7 1.1E-16 7.9E-21 125.1 11.1 91 25-116 1-99 (307)
7 d2akoa1 c.73.1.3 (A:2-251) Glu 98.3 6.3E-06 4.6E-10 56.1 11.5 88 26-124 1-93 (250)
8 d2brxa1 c.73.1.3 (A:1-225) Uri 98.0 2.1E-05 1.5E-09 52.7 9.0 85 27-121 2-91 (225)
9 d1ybda1 c.73.1.3 (A:6-241) Uri 97.8 0.00029 2.1E-08 45.4 12.6 54 24-77 3-63 (236)
10 d1z9da1 c.73.1.3 (A:4-241) Uri 97.8 0.00016 1.2E-08 47.1 10.1 93 25-127 4-103 (238)
11 d2a1fa1 c.73.1.3 (A:2-237) Uri 97.4 0.00023 1.7E-08 46.1 6.4 46 26-71 6-58 (236)
12 d2ij9a1 c.73.1.3 (A:1-219) Uri 97.2 0.00026 1.9E-08 45.7 5.5 45 27-72 2-47 (219)
13 d2hmfa1 c.73.1.3 (A:2-303) Asp 91.8 0.24 1.8E-05 26.7 6.3 49 27-75 1-49 (302)
14 d2j0wa1 c.73.1.3 (A:3-294) Asp 87.7 0.75 5.5E-05 23.5 6.1 49 26-77 1-49 (292)
15 d2cdqa1 c.73.1.3 (A:25-328) As 82.2 1.6 0.00012 21.4 6.7 49 24-74 1-49 (304)
16 d1rxwa2 c.120.1.2 (A:3-219) Fl 68.4 2.7 0.0002 19.9 3.8 30 41-70 54-83 (217)
17 d1xpja_ c.108.1.18 (A:) Hypoth 65.2 4.3 0.00032 18.7 4.8 55 26-80 2-79 (124)
18 d1h4xa_ c.13.2.1 (A:) Anti-sig 60.4 5.3 0.00038 18.1 8.8 85 8-96 23-108 (111)
19 d1nrwa_ c.108.1.10 (A:) Hypoth 60.4 2 0.00015 20.8 1.9 66 26-91 2-71 (285)
20 d2b8ea1 c.108.1.7 (A:416-434,A 59.5 5.5 0.0004 18.0 4.7 58 41-101 21-79 (135)
21 d1qvwa_ c.23.16.2 (A:) Hypothe 58.9 5.6 0.00041 18.0 4.1 55 82-136 154-219 (236)
22 d1g2ia_ c.23.16.2 (A:) Intrace 52.0 7.3 0.00053 17.2 4.5 85 28-135 64-149 (166)
23 d2c4na1 c.108.1.14 (A:1-250) N 51.5 7.4 0.00054 17.2 4.1 55 26-80 4-62 (250)
24 d1b43a2 c.120.1.2 (A:1-219) Fl 51.0 7.5 0.00055 17.1 4.5 28 42-69 56-83 (219)
25 d1zcza2 c.97.1.4 (A:158-452) A 48.8 4 0.00029 18.9 1.9 47 33-80 235-284 (295)
26 d1a77a2 c.120.1.2 (A:2-208) Fl 48.6 8.2 0.0006 16.9 4.6 28 42-69 56-83 (207)
27 d1t64a_ c.42.1.2 (A:) Histone 47.4 8.5 0.00062 16.8 7.4 63 11-73 229-298 (364)
28 d1ovma1 c.31.1.3 (A:181-341) I 47.3 8.6 0.00062 16.8 5.1 44 38-81 10-60 (161)
29 d1vc1a_ c.13.2.1 (A:) Anti-sig 42.1 10 0.00075 16.3 7.1 73 9-82 27-100 (110)
30 d1th8b_ c.13.2.1 (B:) Anti-sig 41.1 11 0.00077 16.2 6.5 74 9-83 25-99 (115)
31 d1ul1x2 c.120.1.2 (X:2-217) Fl 39.7 11 0.00081 16.0 4.3 26 44-69 64-89 (216)
32 d1c3pa_ c.42.1.2 (A:) HDAC hom 39.2 11 0.00083 16.0 5.3 63 12-74 233-302 (372)
33 d1mioa_ c.92.2.3 (A:) Nitrogen 38.3 12 0.00086 15.9 5.7 51 5-64 315-365 (525)
34 d1zpda1 c.31.1.3 (A:188-362) P 36.4 13 0.00092 15.7 5.9 42 39-80 4-52 (175)
35 d1jqoa_ c.1.12.3 (A:) Phosphoe 36.3 13 0.00092 15.7 3.2 58 33-93 574-640 (936)
36 d1l1sa_ c.114.1.1 (A:) Hypothe 36.2 13 0.00092 15.7 6.2 85 10-101 17-102 (111)
37 d1u9ca_ c.23.16.2 (A:) GK2698 31.9 15 0.0011 15.2 3.4 54 83-136 143-202 (221)
38 d1vhva_ c.90.1.1 (A:) Diphthin 31.7 15 0.0011 15.2 5.0 63 15-82 65-127 (251)
39 d1n57a_ c.23.16.2 (A:) HSP31 ( 29.6 16 0.0012 15.0 2.7 106 26-135 142-257 (279)
40 d3c10a1 c.42.1.2 (A:515-900) H 29.0 17 0.0012 14.9 6.4 64 12-75 263-336 (386)
41 d1p90a_ c.55.5.2 (A:) NafY cor 28.8 17 0.0012 14.9 5.9 53 52-105 62-114 (123)
42 d1vgwa_ c.68.1.13 (A:) 4-dipho 28.5 17 0.0012 14.9 3.2 14 11-24 32-45 (226)
43 d1rlma_ c.108.1.10 (A:) Sugar 27.1 15 0.0011 15.3 1.9 65 26-90 3-72 (269)
44 d1wzca1 c.108.1.10 (A:1-243) P 27.0 18 0.0013 14.7 3.6 65 26-91 3-70 (243)
45 d2fi1a1 c.108.1.3 (A:4-190) Pu 27.0 18 0.0013 14.7 6.2 80 46-126 84-177 (187)
46 d1a9xa4 c.30.1.1 (A:556-676) C 26.5 18 0.0013 14.6 5.6 95 24-125 4-110 (121)
47 d1w77a1 c.68.1.13 (A:75-300) 4 25.2 17 0.0012 14.9 1.9 79 11-98 33-119 (226)
48 d3bula2 c.23.6.1 (A:741-896) M 24.6 20 0.0014 14.4 5.2 94 15-115 48-144 (156)
49 d1qyia_ c.108.1.13 (A:) Hypoth 24.4 20 0.0015 14.4 6.0 52 43-94 217-269 (380)
50 d1v7za_ c.125.1.1 (A:) Creatin 23.9 21 0.0015 14.3 3.9 38 32-69 82-123 (257)
51 d1d4oa_ c.31.1.4 (A:) Transhyd 23.6 21 0.0015 14.3 3.6 16 129-145 130-145 (177)
52 d1pnoa_ c.31.1.4 (A:) Transhyd 22.9 21 0.0016 14.2 4.2 36 48-83 14-59 (180)
53 d1bhga3 c.1.8.3 (A:329-632) be 21.4 23 0.0017 14.0 2.6 38 43-80 35-74 (304)
54 d1xkla_ c.69.1.20 (A:) Salicyl 21.3 18 0.0013 14.7 1.4 67 11-77 16-91 (258)
No 1
>d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=100.00 E-value=1.2e-39 Score=272.24 Aligned_cols=149 Identities=40% Similarity=0.739 Sum_probs=140.0
Q ss_pred CCCHHHHHCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCC
Q ss_conf 96002322062289999999987598899986756724746899999999998518971799845724578899970898
Q 537021.9.peg.3 1 MTEKIYQFQAEILEQVLPFVQFYENETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIK 80 (150)
Q Consensus 1 ~~~~~~~~~a~~l~ea~pYi~~~r~ktiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~ 80 (150)
|.+..+.++|.+||||+|||++|||||||||+||+++.|++++.+|++||++|+.+|+++|||||||||++++|+++|++
T Consensus 2 ~~~~~~~~~~~~l~~a~PYi~~~r~ktiVIKlGG~~l~~~~~~~~~~~dIa~L~~~G~~vViVhGgg~~i~~~l~~~gi~ 81 (300)
T d2bufa1 2 LSRDDAAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIE 81 (300)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSSHHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCC
T ss_conf 87678999999999978999997899899998917847865899999999999975992799667378899998744467
Q ss_pred CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEECCC-------------CCCCCCCC
Q ss_conf 11557834661248999999974166899999998289976877865589899997475-------------21117995
Q 537021.9.peg.3 81 SKFENGLRITDQQTAEVVEMVLAGSINKKIVSLINQTGTQAIGICGKDGNMVFAEKARH-------------SLRLSPNT 147 (150)
Q Consensus 81 ~~~v~G~RVTd~~tl~iv~~vL~G~vn~~lv~~L~~~g~~avglsg~dg~li~a~~~~~-------------~lg~vg~~ 147 (150)
++|++|+|+||+++|++++++++|++|++|++.|+++|++|+|+++.|++++.+++... ++|++|++
T Consensus 82 ~~~~~g~RvT~~~~l~~~~~~~~g~vn~~lv~~l~~~g~~a~~l~~~d~~~i~~~~~~~~~~~~~~~~~~~id~g~~G~v 161 (300)
T d2bufa1 82 SHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEV 161 (300)
T ss_dssp CCBSSSSBCBCHHHHHHHHHHHHHTHHHHHHHHHHHTTCCEEEEEETGGGCEEEEECCCCCC--------CCCCBSBEEE
T ss_pred CEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 61037845466113899999998677899999998669854225777665688521565556753244323345765110
Q ss_pred CC
Q ss_conf 10
Q 537021.9.peg.3 148 KK 149 (150)
Q Consensus 148 ~k 149 (150)
++
T Consensus 162 ~~ 163 (300)
T d2bufa1 162 TG 163 (300)
T ss_dssp EE
T ss_pred EE
T ss_conf 30
No 2
>d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00 E-value=3e-33 Score=231.28 Aligned_cols=143 Identities=36% Similarity=0.728 Sum_probs=134.1
Q ss_pred HHCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECC
Q ss_conf 22062289999999987598899986756724746899999999998518971799845724578899970898115578
Q 537021.9.peg.3 7 QFQAEILEQVLPFVQFYENETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFENG 86 (150)
Q Consensus 7 ~~~a~~l~ea~pYi~~~r~ktiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~v~G 86 (150)
..||++||||+|||++|||||||||+||+++.|++++.+|++||++|+.+|+++||||||+||++++|.++|++++|++|
T Consensus 7 ~~~~~~l~~a~pYi~~~r~ktiVIKlGGsvl~~~~~~~~l~~dia~L~~~G~~vVlVhGg~~~i~~~l~~~~~~~~~~~~ 86 (291)
T d2ap9a1 7 HIKAQVLAEALPWLKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGIHPVVVHGGGPQITAMLRRLGIEGDFKGG 86 (291)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEECTHHHHSHHHHHHHHHHHHHHHTTTCEEEEEECCSHHHHHHHHHHTCCCCCSSS
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCCCCCCCCC
T ss_conf 66799999976899996899899998907854977999999999999987997999968841333257873998533443
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEECC-------CCCCCCCCCCC
Q ss_conf 3466124899999997416689999999828997687786558989999747-------52111799510
Q 537021.9.peg.3 87 LRITDQQTAEVVEMVLAGSINKKIVSLINQTGTQAIGICGKDGNMVFAEKAR-------HSLRLSPNTKK 149 (150)
Q Consensus 87 ~RVTd~~tl~iv~~vL~G~vn~~lv~~L~~~g~~avglsg~dg~li~a~~~~-------~~lg~vg~~~k 149 (150)
+|+|++++|+++++++.+..+..+++.+.+.|..+.++++.+++++.|++.. .+++++|++++
T Consensus 87 ~r~t~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~G~v~~ 156 (291)
T d2ap9a1 87 FRVTTPEVLDVARMVLFGQVGRELVNLINAHGPYAVGITGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQ 156 (291)
T ss_dssp SCCBCHHHHHHHHHHHHHTHHHHHHHHHTTSSSCEEEEETTGGGCEEEEECCBCSSSCCBCCBSEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCC
T ss_conf 3567488887777765667889999999866985223023311000023333103665664323031022
No 3
>d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]}
Probab=99.98 E-value=4.3e-32 Score=223.89 Aligned_cols=141 Identities=43% Similarity=0.791 Sum_probs=132.7
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCC
Q ss_conf 06228999999998759889998675672474689999999999851897179984572457889997089811557834
Q 537021.9.peg.3 9 QAEILEQVLPFVQFYENETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFENGLR 88 (150)
Q Consensus 9 ~a~~l~ea~pYi~~~r~ktiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~v~G~R 88 (150)
+...||||+|||++|||||||||+||+++.|++.++++++||++|+..|+++|||||||+|+++.+.++|++++|.+|.|
T Consensus 5 ~~~~~~~~~pyi~~~r~k~iVIKlGgsvi~~~~~~~~l~~dIa~L~~~G~~iVlVhGg~~~~~~~l~~~~i~~~~~~~~~ 84 (282)
T d2btya1 5 TVNVLLEALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHR 84 (282)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSHHHHSHHHHHHHHHHHHHHHHTTCEEEEEECCSHHHHHHHHHHTCCCCBSSSSB
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCEECCCCC
T ss_conf 88999997899998689989999790671785389999999999998899699997897542356998699620026765
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEECC--CCCCCCCCCCC
Q ss_conf 66124899999997416689999999828997687786558989999747--52111799510
Q 537021.9.peg.3 89 ITDQQTAEVVEMVLAGSINKKIVSLINQTGTQAIGICGKDGNMVFAEKAR--HSLRLSPNTKK 149 (150)
Q Consensus 89 VTd~~tl~iv~~vL~G~vn~~lv~~L~~~g~~avglsg~dg~li~a~~~~--~~lg~vg~~~k 149 (150)
+|++++++++++++.|.+|+.+++.|+++|.+++++++.+.+...+.... .+++++|++++
T Consensus 85 ~t~~~~~~~~~~~~~~~~n~~~~~~l~~~g~~a~~l~~~~~~~~~~~~~~~~~d~~~~g~~~~ 147 (282)
T d2btya1 85 VTDEKTMEIVEMVLVGKINKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKK 147 (282)
T ss_dssp CBCHHHHHHHHHHHHHTHHHHHHHHHHTTTCCEEEEETTGGGSEEEEECCTTCCCBSBEEEEE
T ss_pred CCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 565356899999973212699999987438875663044444057314554553454444322
No 4
>d1e19a_ c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.82 E-value=1.1e-20 Score=150.83 Aligned_cols=113 Identities=16% Similarity=0.180 Sum_probs=100.4
Q ss_pred CCEEEEEECHHHHCCH----------HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCCCCHHH
Q ss_conf 9889998675672474----------689999999999851897179984572457889997089811557834661248
Q 537021.9.peg.3 25 NETIVVKYGGHVMNCT----------DLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFENGLRITDQQT 94 (150)
Q Consensus 25 ~ktiVIK~GG~~l~d~----------~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~v~G~RVTd~~t 94 (150)
||+||||+||++|.++ +.++++++||+.|+..|.++||||||||||+++|.+++++++|.++.|+|+.++
T Consensus 1 ~KrIVIKiGgs~l~~~~~~~~~~~~~~~l~~~~~~Ia~L~~~G~~vVlVhGGgpqi~~~l~~~~~~~~~~~~~~~~~~~~ 80 (313)
T d1e19a_ 1 GKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQATYGIPAQPMDVA 80 (313)
T ss_dssp CCEEEEECCGGGTCCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_pred CCEEEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCHHH
T ss_conf 99899996867608998778889999999999999999998898799986898999999996798534478764361788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEEE-------------EEEEECCEEEEEEC
Q ss_conf 99999997416689999999828997687-------------78655898999974
Q 537021.9.peg.3 95 AEVVEMVLAGSINKKIVSLINQTGTQAIG-------------ICGKDGNMVFAEKA 137 (150)
Q Consensus 95 l~iv~~vL~G~vn~~lv~~L~~~g~~avg-------------lsg~dg~li~a~~~ 137 (150)
+..+.+++.+.++..+++.+.+.++++.. +++.|+++..++++
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 136 (313)
T d1e19a_ 81 GAMSQGWIGYMIQQALKNELRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFY 136 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEBCCEEEECTTCGGGTSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH
T ss_conf 89999999999999999999860643776678886204368777651585011010
No 5
>d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]}
Probab=99.81 E-value=1.9e-19 Score=142.75 Aligned_cols=123 Identities=23% Similarity=0.424 Sum_probs=114.2
Q ss_pred CEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCC-EEEEECCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 8899986756724746899999999998518971-799845724578899970898115578346612489999999741
Q 537021.9.peg.3 26 ETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNIT-PVIVHGGGPQIGAVLEKMGIKSKFENGLRITDQQTAEVVEMVLAG 104 (150)
Q Consensus 26 ktiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k-~ViVHGgg~qI~~~l~~~gi~~~~v~G~RVTd~~tl~iv~~vL~G 104 (150)
+.+|||+||+++.|++.++++++||+.|+..|.+ +|||||+|||++++++++|+++++.+|.|+|+++++.++.+++.+
T Consensus 3 ~~IVIKiGgs~lt~~~~~~~~~~~ia~l~~~g~~~vvvvhG~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (258)
T d1gs5a_ 3 NPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAG 82 (258)
T ss_dssp CCEEEEECGGGGGCHHHHHHHHHHHHHHHTTCCSCEEEEECCHHHHHHHHHHHTCCCCEETTEECBCHHHHHHHHHHHHT
T ss_pred CCEEEEECCHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 87899989004059899999999999999879965999889915653101343044301321000037799999999988
Q ss_pred HHHHHHHHHHHHCCCCEEEEEEEECCEEEEEECCCCCCCCCCCC
Q ss_conf 66899999998289976877865589899997475211179951
Q 537021.9.peg.3 105 SINKKIVSLINQTGTQAIGICGKDGNMVFAEKARHSLRLSPNTK 148 (150)
Q Consensus 105 ~vn~~lv~~L~~~g~~avglsg~dg~li~a~~~~~~lg~vg~~~ 148 (150)
..+..++..++..|.++..+++.+.+.....+...++...++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (258)
T d1gs5a_ 83 TANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQ 126 (258)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTGGGCEEEEECCGGGBSBEEEE
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 77788888874057532001211233100102221024332121
No 6
>d1b7ba_ c.73.1.1 (A:) Carbamate kinase {Enterococcus faecium [TaxId: 1352]}
Probab=99.69 E-value=1.1e-16 Score=125.11 Aligned_cols=91 Identities=19% Similarity=0.230 Sum_probs=70.7
Q ss_pred CCEEEEEECHHHHCCH--------HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCCCCHHHHH
Q ss_conf 9889998675672474--------68999999999985189717998457245788999708981155783466124899
Q 537021.9.peg.3 25 NETIVVKYGGHVMNCT--------DLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFENGLRITDQQTAE 96 (150)
Q Consensus 25 ~ktiVIK~GG~~l~d~--------~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~v~G~RVTd~~tl~ 96 (150)
|||||||+||++|.++ +.+.++++||+.|+..|+++||||||||||++.+.++++.+.+..+.|.|+.+++.
T Consensus 1 gk~iVIK~GGsal~~~~~~~~~~~~~l~~~~~~Ia~L~~~G~~vViVHGGgpqi~~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (307)
T d1b7ba_ 1 GKKMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSEKNPAMPLDTCVAM 80 (307)
T ss_dssp CCEEEEEECHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHHHTCSSSSCCCCHHHHHHH
T ss_pred CCEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
T ss_conf 98899997823427999874378999999999999999889879998678999999998538987544666013368878
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999741668999999982
Q 537021.9.peg.3 97 VVEMVLAGSINKKIVSLINQ 116 (150)
Q Consensus 97 iv~~vL~G~vn~~lv~~L~~ 116 (150)
...+. .+.+..........
T Consensus 81 ~~~~~-~~~~~~~~~~~~~~ 99 (307)
T d1b7ba_ 81 TQGSI-GYWLSNALNQELNK 99 (307)
T ss_dssp HHHHH-HHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHH
T ss_conf 99999-88875566777764
No 7
>d2akoa1 c.73.1.3 (A:2-251) Glutamate 5-kinase {Campylobacter jejuni [TaxId: 197]}
Probab=98.31 E-value=6.3e-06 Score=56.10 Aligned_cols=88 Identities=23% Similarity=0.252 Sum_probs=55.2
Q ss_pred CEEEEEECHHHHCCH-----HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHH
Q ss_conf 889998675672474-----689999999999851897179984572457889997089811557834661248999999
Q 537021.9.peg.3 26 ETIVVKYGGHVMNCT-----DLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFENGLRITDQQTAEVVEM 100 (150)
Q Consensus 26 ktiVIK~GG~~l~d~-----~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~v~G~RVTd~~tl~iv~~ 100 (150)
|.+|||+||+++.|+ +...+|+++|+.++. +.++||||||+ +..-...+++..+. .+..+.+..+-+
T Consensus 1 krIViKlGGs~it~k~~~~~~~l~~~~~~I~~l~~-~~~~vIV~gGa--~~~G~~~~~~~~~~-----~~~~~~~~~~g~ 72 (250)
T d2akoa1 1 KRIVVKVGSHVISEENTLSFERLKNLVAFLAKLME-KYEVILVTSAA--ISAGHTKLDIDRKN-----LINKQVLAAIGQ 72 (250)
T ss_dssp CEEEEEECHHHHBCSSSBCHHHHHHHHHHHHHHHH-HSEEEEEECCH--HHHHHHHCCCCSSS-----HHHHHHHHHHHH
T ss_pred CEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHC-CCEEEEEECCC--CCCCCCCCCCCCCH-----HHHHHHHHCCCC
T ss_conf 97999936575618998189999999999999976-99099997571--12653223422201-----233333421440
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 974166899999998289976877
Q 537021.9.peg.3 101 VLAGSINKKIVSLINQTGTQAIGI 124 (150)
Q Consensus 101 vL~G~vn~~lv~~L~~~g~~avgl 124 (150)
. .....+...|+..|..+..+
T Consensus 73 ~---~~~~~~~~~l~~~~~~~~~~ 93 (250)
T d2akoa1 73 P---FLISVYNELLAKFNKLGGQI 93 (250)
T ss_dssp H---HHHHHHHHHHGGGTCCEEEE
T ss_pred H---HHHHHHHHHHHHCCCCCCCC
T ss_conf 4---67788998753301223101
No 8
>d2brxa1 c.73.1.3 (A:1-225) Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: 2261]}
Probab=98.00 E-value=2.1e-05 Score=52.73 Aligned_cols=85 Identities=16% Similarity=0.243 Sum_probs=52.5
Q ss_pred EEEEEECHHHHCCH----HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHH
Q ss_conf 89998675672474----68999999999985189717998457245788999708981155783466124899999997
Q 537021.9.peg.3 27 TIVVKYGGHVMNCT----DLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFENGLRITDQQTAEVVEMVL 102 (150)
Q Consensus 27 tiVIK~GG~~l~d~----~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~v~G~RVTd~~tl~iv~~vL 102 (150)
.+|||+||+++.++ +...+++++|+.++. +.++|||||||.......+... .....++..-.....
T Consensus 2 rIViKiGGs~l~~~~~~~~~i~~l~~~I~~l~~-~~~~viV~ggG~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 71 (225)
T d2brxa1 2 RIVFDIGGSVLVPENPDIDFIKEIAYQLTKVSE-DHEVAVVVGGGKLARKYIEVAE---------KFNSSETFKDFIGIQ 71 (225)
T ss_dssp EEEEEECHHHHCSSSCCHHHHHHHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHH---------TTTCCHHHHHHHHHH
T ss_pred EEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHC-CCCEEEEECCCHHHHHHHHHHH---------HCCHHHHHHHHHHHH
T ss_conf 699996066617999999999999999999975-9968999886188878887543---------100016888873346
Q ss_pred HHHHHHHHHH-HHHHCCCCE
Q ss_conf 4166899999-998289976
Q 537021.9.peg.3 103 AGSINKKIVS-LINQTGTQA 121 (150)
Q Consensus 103 ~G~vn~~lv~-~L~~~g~~a 121 (150)
...+|..+.+ .|...+.+.
T Consensus 72 ~~~~~~~~~~~~l~~~~~~~ 91 (225)
T d2brxa1 72 ITRANAMLLIAALREKAYPV 91 (225)
T ss_dssp HHHHHHHHHHHHHGGGBCSS
T ss_pred HHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999997222254
No 9
>d1ybda1 c.73.1.3 (A:6-241) Uridylate kinase PyrH {Neisseria meningitidis [TaxId: 487]}
Probab=97.84 E-value=0.00029 Score=45.42 Aligned_cols=54 Identities=24% Similarity=0.308 Sum_probs=44.2
Q ss_pred CCCEEEEEECHHHHC-------CHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHC
Q ss_conf 598899986756724-------746899999999998518971799845724578899970
Q 537021.9.peg.3 24 ENETIVVKYGGHVMN-------CTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKM 77 (150)
Q Consensus 24 r~ktiVIK~GG~~l~-------d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~ 77 (150)
+-|.+|||+||+.+. |.+....++++|+.++..|.++++|.||+..........
T Consensus 3 k~krIViKiGgs~l~~~~~~~i~~~~i~~la~~I~~l~~~g~~vviVssG~~~~~~~~~~~ 63 (236)
T d1ybda1 3 KYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVSAQA 63 (236)
T ss_dssp SCSEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
T ss_conf 7778999977212227999986999999999999999977997999941354453221122
No 10
>d1z9da1 c.73.1.3 (A:4-241) Uridylate kinase PyrH {Streptococcus pyogenes [TaxId: 1314]}
Probab=97.76 E-value=0.00016 Score=47.12 Aligned_cols=93 Identities=16% Similarity=0.184 Sum_probs=56.1
Q ss_pred CCEEEEEECHHHHC-------CHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHH
Q ss_conf 98899986756724-------74689999999999851897179984572457889997089811557834661248999
Q 537021.9.peg.3 25 NETIVVKYGGHVMN-------CTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFENGLRITDQQTAEV 97 (150)
Q Consensus 25 ~ktiVIK~GG~~l~-------d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~v~G~RVTd~~tl~i 97 (150)
=|.+|||+||+++. |.+...+++++|+.++..|..+++|+||+........... +. .......
T Consensus 4 ~krIViKiGgs~lt~~~~~~l~~~~l~~ia~~I~~l~~~g~~Vv~v~~g~~~~~~~~~~~~-------~~---~~~~~~~ 73 (238)
T d1z9da1 4 YQRILIKLSGEALAGEKGVGIDIPTVQAIAKEIAEVHVSGVQIALVIGGGNLWRGEPAADA-------GM---DRVQADY 73 (238)
T ss_dssp CSEEEEEECGGGGTCSSSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCHHHHHHH-------TC---CHHHHHH
T ss_pred CCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEECCCC-------CC---CCHHHHH
T ss_conf 8889999770011079999869999999999999999779989998244555543000246-------87---4024899
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 999974166899999998289976877865
Q 537021.9.peg.3 98 VEMVLAGSINKKIVSLINQTGTQAIGICGK 127 (150)
Q Consensus 98 v~~vL~G~vn~~lv~~L~~~g~~avglsg~ 127 (150)
.........+......+...+..+......
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 103 (238)
T d1z9da1 74 TGMLGTVMNALVMADSLQHYGVDTRVQTAI 103 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 999999889999998776479640224556
No 11
>d2a1fa1 c.73.1.3 (A:2-237) Uridylate kinase PyrH {Haemophilus influenzae [TaxId: 727]}
Probab=97.36 E-value=0.00023 Score=46.11 Aligned_cols=46 Identities=20% Similarity=0.349 Sum_probs=39.3
Q ss_pred CEEEEEECHHHHC-------CHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
Q ss_conf 8899986756724-------746899999999998518971799845724578
Q 537021.9.peg.3 26 ETIVVKYGGHVMN-------CTDLSKDFVNDIALLKKSNITPVIVHGGGPQIG 71 (150)
Q Consensus 26 ktiVIK~GG~~l~-------d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~ 71 (150)
|.+|||+||+.+. |.+...+++++|+.++..|.++++|.+|+....
T Consensus 6 kRIViKiGgs~l~~~~~~~i~~~~i~~la~~I~~l~~~g~~vivVssg~~~~~ 58 (236)
T d2a1fa1 6 KRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFR 58 (236)
T ss_dssp SEEEEEECGGGGCCTTSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCC
T ss_pred CEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH
T ss_conf 57999976012137999885999999999999999977985999934553014
No 12
>d2ij9a1 c.73.1.3 (A:1-219) Uridylate kinase PyrH {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.23 E-value=0.00026 Score=45.73 Aligned_cols=45 Identities=24% Similarity=0.494 Sum_probs=36.4
Q ss_pred EEEEEECHHHHC-CHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHH
Q ss_conf 899986756724-7468999999999985189717998457245788
Q 537021.9.peg.3 27 TIVVKYGGHVMN-CTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGA 72 (150)
Q Consensus 27 tiVIK~GG~~l~-d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~ 72 (150)
.+|||+||+++. +.+....++++|+.++.-| +++||||||.....
T Consensus 2 rIViKiGgs~l~~~~~~i~~la~~i~~l~~~~-~~vIVvsgG~~ar~ 47 (219)
T d2ij9a1 2 KVVLSLGGSVLSNESEKIREFAKTIESVAQQN-QVFVVVGGGKLARE 47 (219)
T ss_dssp EEEEEECSSTTTTCHHHHHHHHHHHHHHHHHS-EEEEEECCHHHHHH
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC-CEEEEECCCCCCCC
T ss_conf 79999621142786799999999999998299-18999898712231
No 13
>d2hmfa1 c.73.1.3 (A:2-303) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]}
Probab=91.81 E-value=0.24 Score=26.69 Aligned_cols=49 Identities=20% Similarity=0.281 Sum_probs=34.9
Q ss_pred EEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH
Q ss_conf 8999867567247468999999999985189717998457245788999
Q 537021.9.peg.3 27 TIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLE 75 (150)
Q Consensus 27 tiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~ 75 (150)
|.|.||||+-+.|.+-+.++++-|......+.++|+|.-+=--++..|.
T Consensus 1 ~tV~KFGGTSvadae~i~~V~~II~~~~~~~~~~vVVVSA~ggvTn~L~ 49 (302)
T d2hmfa1 1 TTVMKFGGTSVGSGERIRHVAKIVTKRKKEDDDVVVVVSAMSEVTNALV 49 (302)
T ss_dssp CEEEEECTGGGSSHHHHHHHHHHHHHHHHHCSCEEEEECCCTTHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
T ss_conf 9799968302788999999999998787569988999709999712999
No 14
>d2j0wa1 c.73.1.3 (A:3-294) Aspartokinase {Escherichia coli [TaxId: 562]}
Probab=87.72 E-value=0.75 Score=23.54 Aligned_cols=49 Identities=18% Similarity=0.249 Sum_probs=33.0
Q ss_pred CEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHC
Q ss_conf 8899986756724746899999999998518971799845724578899970
Q 537021.9.peg.3 26 ETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKM 77 (150)
Q Consensus 26 ktiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~ 77 (150)
+.+|.||||+-+.|.+.+.++++-| ..-+.++|+|.-+=--++..|.+.
T Consensus 1 ~~iV~KFGGTSv~~~~~i~~v~~ii---~~~~~~~vVVVSA~~gvTd~L~~~ 49 (292)
T d2j0wa1 1 EIVVSKFGGTSVADFDAMNRSADIV---LSDANVRLVVLSASAGITNLLVAL 49 (292)
T ss_dssp CCEEEEECSGGGSSHHHHHHHHHHH---TSCTTEEEEEECCCTTHHHHHHHH
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHH---HHCCCCEEEEEECCCCCHHHHHHH
T ss_conf 9199926841359899999999999---805997699985999978999999
No 15
>d2cdqa1 c.73.1.3 (A:25-328) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=82.18 E-value=1.6 Score=21.40 Aligned_cols=49 Identities=24% Similarity=0.293 Sum_probs=31.2
Q ss_pred CCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
Q ss_conf 598899986756724746899999999998518971799845724578899
Q 537021.9.peg.3 24 ENETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVL 74 (150)
Q Consensus 24 r~ktiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l 74 (150)
+|=+.|.||||+-+.|++.+.++++=|.. ....++|+|.-+=--++..|
T Consensus 1 ~~~~~V~KFGGTSv~~~~~i~~v~~iI~~--~~~~~~vVVVSA~ggvTd~L 49 (304)
T d2cdqa1 1 KGITCVMKFGGSSVASAERMKEVADLILT--FPEESPVIVLSAMGKTTNNL 49 (304)
T ss_dssp CCCCEEEEECTGGGSSHHHHHHHHHHHHH--CTTCCEEEEECCSTTHHHHH
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHH--CCCCCCEEEEECCCCCHHHH
T ss_conf 98869995273023889999999999971--68998389994999874799
No 16
>d1rxwa2 c.120.1.2 (A:3-219) Flap endonuclease-1 (Fen-1 nuclease) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=68.43 E-value=2.7 Score=19.95 Aligned_cols=30 Identities=20% Similarity=0.339 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEECCCHHH
Q ss_conf 689999999999851897179984572457
Q 537021.9.peg.3 41 DLSKDFVNDIALLKKSNITPVIVHGGGPQI 70 (150)
Q Consensus 41 ~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI 70 (150)
.....|+..+..|...|++||.|+-|.|--
T Consensus 54 ~~l~~~~~ri~~l~~~~I~pifVFDG~~p~ 83 (217)
T d1rxwa2 54 SHLSGILYRVSNMVEVGIRPVFVFDGEPPE 83 (217)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEECCSCCG
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf 779999999999997698399997798974
No 17
>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}
Probab=65.23 E-value=4.3 Score=18.67 Aligned_cols=55 Identities=16% Similarity=0.254 Sum_probs=38.6
Q ss_pred CEEEEEECHHHHCCH-------HHHHHHHHHHHHHHHCCCCEEEEECCC----------------HHHHHHHHHCCCC
Q ss_conf 889998675672474-------689999999999851897179984572----------------4578899970898
Q 537021.9.peg.3 26 ETIVVKYGGHVMNCT-------DLSKDFVNDIALLKKSNITPVIVHGGG----------------PQIGAVLEKMGIK 80 (150)
Q Consensus 26 ktiVIK~GG~~l~d~-------~l~~~~~~dI~ll~~~G~k~ViVHGgg----------------~qI~~~l~~~gi~ 80 (150)
|++++-+.|.+.... ......++-+..|+..|.+++|.-+-| +..-++|++.|++
T Consensus 2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~ 79 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP 79 (124)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC
T ss_pred CEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 999993788728899998273684899999999999879989999568754557757787888999999999982998
No 18
>d1h4xa_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Bacillus sphaericus [TaxId: 1421]}
Probab=60.43 E-value=5.3 Score=18.12 Aligned_cols=85 Identities=9% Similarity=0.086 Sum_probs=62.2
Q ss_pred HCCCHHHH-HHHHHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECC
Q ss_conf 20622899-99999987598899986756724746899999999998518971799845724578899970898115578
Q 537021.9.peg.3 8 FQAEILEQ-VLPFVQFYENETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFENG 86 (150)
Q Consensus 8 ~~a~~l~e-a~pYi~~~r~ktiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~v~G 86 (150)
..|+-|++ ..+.+.+.+-+.+|+-+.+.-..|......+..-...++..|.+++ +.|-.|++.+.++..|+..-+.-
T Consensus 23 ~~a~~~~~~~~~~i~~~~~~~vvlD~s~v~~iDssgl~~L~~~~~~~~~~g~~l~-l~~~~~~v~~~l~~~gl~~~~~~- 100 (111)
T d1h4xa_ 23 HAVEQIRAKISTAIFQGAVTTIIWNFERLSFMDSSGVGLVLGRMRELEAVAGRTI-LLNPSPTMRKVFQFSGLGPWMMD- 100 (111)
T ss_dssp HHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEECTHHHHHHHHHHHHHHTTTCEEE-EESCCHHHHHHHHHTTCGGGEEC-
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEE-EECCCHHHHHHHHHCCCCEEEEE-
T ss_conf 9999999999999855999699999889965492699999999999987799999-96599899999998699827825-
Q ss_pred CCCCCHHHHH
Q ss_conf 3466124899
Q 537021.9.peg.3 87 LRITDQQTAE 96 (150)
Q Consensus 87 ~RVTd~~tl~ 96 (150)
-|.+++++
T Consensus 101 --~t~~eAl~ 108 (111)
T d1h4xa_ 101 --ATEEEAID 108 (111)
T ss_dssp --SCHHHHHH
T ss_pred --CCHHHHHH
T ss_conf --89999998
No 19
>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}
Probab=60.36 E-value=2 Score=20.83 Aligned_cols=66 Identities=24% Similarity=0.395 Sum_probs=32.1
Q ss_pred CEEEEEECHHHHCCH-HHHHHHHHHHHHHHHCCCCEEEEECCC-HHHHHHHHHCCCCCEEE--CCCCCCC
Q ss_conf 889998675672474-689999999999851897179984572-45788999708981155--7834661
Q 537021.9.peg.3 26 ETIVVKYGGHVMNCT-DLSKDFVNDIALLKKSNITPVIVHGGG-PQIGAVLEKMGIKSKFE--NGLRITD 91 (150)
Q Consensus 26 ktiVIK~GG~~l~d~-~l~~~~~~dI~ll~~~G~k~ViVHGgg-~qI~~~l~~~gi~~~~v--~G~RVTd 91 (150)
|.++.=+.|..+.+. .+.+...+.|..|+..|++++++-|-. ..+...+++++...-++ +|-.+.+
T Consensus 2 Kli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~ 71 (285)
T d1nrwa_ 2 KLIAIDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHD 71 (285)
T ss_dssp CEEEEECCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEEC
T ss_pred EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCEEEEE
T ss_conf 0999978866418879419999999999997889999997999899999999809985899547316995
No 20
>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=59.52 E-value=5.5 Score=18.02 Aligned_cols=58 Identities=14% Similarity=0.217 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH-HHCCCCCEEECCCCCCCHHHHHHHHHH
Q ss_conf 6899999999998518971799845724578899-970898115578346612489999999
Q 537021.9.peg.3 41 DLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVL-EKMGIKSKFENGLRITDQQTAEVVEMV 101 (150)
Q Consensus 41 ~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l-~~~gi~~~~v~G~RVTd~~tl~iv~~v 101 (150)
.++++..+-|..|+..|+++.++-|-.++.-+.. +++||+.-| . ++++++-..+++.-
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~v~-~--~~~p~~k~~~v~~~ 79 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI-A--EVLPHQKSEEVKKL 79 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEE-C--SCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHC-C--CCCHHHHHHHHHHH
T ss_conf 99811999999999859979997586335556777654222101-2--11026799999999
No 21
>d1qvwa_ c.23.16.2 (A:) Hypothetical protein Ydr533Cp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=58.89 E-value=5.6 Score=17.95 Aligned_cols=55 Identities=15% Similarity=0.158 Sum_probs=34.9
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHH----HHHHHHHHHHCCCCEE-------EEEEEECCEEEEEE
Q ss_conf 1557834661248999999974166----8999999982899768-------77865589899997
Q 537021.9.peg.3 82 KFENGLRITDQQTAEVVEMVLAGSI----NKKIVSLINQTGTQAI-------GICGKDGNMVFAEK 136 (150)
Q Consensus 82 ~~v~G~RVTd~~tl~iv~~vL~G~v----n~~lv~~L~~~g~~av-------glsg~dg~li~a~~ 136 (150)
..+.|.|+|.-...+-..+-+...+ -..+...|.+.|..=+ ....+|+|+|+++-
T Consensus 154 ~ll~Gk~vT~f~~~ee~~~~~~~~~~~~~~~~le~~l~~~Ga~~~~~~~~~~~~VVvDg~lITGqn 219 (236)
T d1qvwa_ 154 PLIEGKSITGFTDVGETIMGVDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVN 219 (236)
T ss_dssp BTTTTCEECCSCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECS
T ss_pred CCCCCCEECCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCEEEECCEEECCC
T ss_conf 500672541578688863131112567774339999998699886467789888898599886978
No 22
>d1g2ia_ c.23.16.2 (A:) Intracellular protease {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=51.99 E-value=7.3 Score=17.24 Aligned_cols=85 Identities=24% Similarity=0.225 Sum_probs=43.8
Q ss_pred EEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99986756724746899999999998518971799845724578899970898115578346612489999999741668
Q 537021.9.peg.3 28 IVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFENGLRITDQQTAEVVEMVLAGSIN 107 (150)
Q Consensus 28 iVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~v~G~RVTd~~tl~iv~~vL~G~vn 107 (150)
.||--||.........+.+.+-+...+..| ++|.-...|+.+ |.+.| ..+|.|+|+.-...
T Consensus 64 ~viipGg~~~~~~~~~~~~~~~l~~~~~~~-k~i~aiC~G~~~---La~aG----lL~g~~~T~~~~~~----------- 124 (166)
T d1g2ia_ 64 ALVLPGGRAPERVRLNEKAVSIARKMFSEG-KPVASICHGPQI---LISAG----VLRGRKGTSYPGIK----------- 124 (166)
T ss_dssp EEEECCBSHHHHHTTCHHHHHHHHHHHHTT-CCEEEETTTTHH---HHHHT----CCTTCEECCCGGGH-----------
T ss_pred EEEEECCCCHHHHCCCHHHHHHHHHHHHCC-CEEEECCCCCHH---HHHCC----CCCCCCCCCCCCHH-----------
T ss_conf 899803341333124857789999988528-745203664144---55448----34587665570078-----------
Q ss_pred HHHHHHHHHCCCCEEE-EEEEECCEEEEE
Q ss_conf 9999999828997687-786558989999
Q 537021.9.peg.3 108 KKIVSLINQTGTQAIG-ICGKDGNMVFAE 135 (150)
Q Consensus 108 ~~lv~~L~~~g~~avg-lsg~dg~li~a~ 135 (150)
..|...|.+-+. --..|||++++.
T Consensus 125 ----~~l~~~g~~~~~~~vV~Dg~iiTs~ 149 (166)
T d1g2ia_ 125 ----DDMINAGVEWVDAEVVVDGNWVSSR 149 (166)
T ss_dssp ----HHHHHTTCEECCSSCEEETTEEEEC
T ss_pred ----HHHHHCCCEECCCCEEEECCEEECC
T ss_conf ----9999769857579999969999797
No 23
>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}
Probab=51.51 E-value=7.4 Score=17.19 Aligned_cols=55 Identities=7% Similarity=0.135 Sum_probs=28.6
Q ss_pred CEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCC----HHHHHHHHHCCCC
Q ss_conf 889998675672474689999999999851897179984572----4578899970898
Q 537021.9.peg.3 26 ETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGG----PQIGAVLEKMGIK 80 (150)
Q Consensus 26 ktiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg----~qI~~~l~~~gi~ 80 (150)
|.+..=++|.++.+...++...+-|..|+..|++++++-... .++-+.+.++|++
T Consensus 4 k~VifDlDGTL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 4 KNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp CEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCC
T ss_conf 79999799801879985820999999999779958999289999999998887630356
No 24
>d1b43a2 c.120.1.2 (A:1-219) Flap endonuclease-1 (Fen-1 nuclease) {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=51.00 E-value=7.5 Score=17.14 Aligned_cols=28 Identities=25% Similarity=0.341 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCHH
Q ss_conf 8999999999985189717998457245
Q 537021.9.peg.3 42 LSKDFVNDIALLKKSNITPVIVHGGGPQ 69 (150)
Q Consensus 42 l~~~~~~dI~ll~~~G~k~ViVHGgg~q 69 (150)
....++.-+..|...|++||.|+-|.+-
T Consensus 56 ~l~~~~~r~~~Ll~~~I~pVFVFDG~~~ 83 (219)
T d1b43a2 56 HLSGLFYRTINLMEAGIKPVYVFDGEPP 83 (219)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf 7999999999999869849999589998
No 25
>d1zcza2 c.97.1.4 (A:158-452) AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC {Thermotoga maritima [TaxId: 2336]}
Probab=48.77 E-value=4 Score=18.90 Aligned_cols=47 Identities=17% Similarity=0.350 Sum_probs=25.8
Q ss_pred CHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCC---HHHHHHHHHCCCC
Q ss_conf 75672474689999999999851897179984572---4578899970898
Q 537021.9.peg.3 33 GGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGG---PQIGAVLEKMGIK 80 (150)
Q Consensus 33 GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg---~qI~~~l~~~gi~ 80 (150)
-|++|.++..| .|-+.|-.+...|++-|+-.||. ..+-+..+++|+.
T Consensus 235 ~g~v~aSDAFF-PF~D~i~~a~~~Gv~aIiqPGGSirD~evI~aan~~gi~ 284 (295)
T d1zcza2 235 KGAVAASDAFF-PFPDSLEILAQAGVKAVVAPLGSIRDEEVIEKARELGIT 284 (295)
T ss_dssp TTCEEEESSCC-SSHHHHHHHHHTTCCEEEECCCCTTHHHHHHHHHHHTCE
T ss_pred CCCEEECCCCC-CCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCE
T ss_conf 48279724576-885689999985994999899864639999999985978
No 26
>d1a77a2 c.120.1.2 (A:2-208) Flap endonuclease-1 (Fen-1 nuclease) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=48.57 E-value=8.2 Score=16.90 Aligned_cols=28 Identities=25% Similarity=0.382 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCHH
Q ss_conf 8999999999985189717998457245
Q 537021.9.peg.3 42 LSKDFVNDIALLKKSNITPVIVHGGGPQ 69 (150)
Q Consensus 42 l~~~~~~dI~ll~~~G~k~ViVHGgg~q 69 (150)
.+..++..+..|...|++||.|+-|.|-
T Consensus 56 ~l~~~~~~~~~ll~~~I~pifVFDG~~~ 83 (207)
T d1a77a2 56 AYNGVFYKTIHLLENDITPIWVFDGEPP 83 (207)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCCTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf 9999999999999759819999879995
No 27
>d1t64a_ c.42.1.2 (A:) Histone deacetylase 8, HDAC8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.42 E-value=8.5 Score=16.78 Aligned_cols=63 Identities=17% Similarity=0.334 Sum_probs=46.2
Q ss_pred CHHHHHH-HHHHHHCCCEEEEEECHHHHCCHH------HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH
Q ss_conf 2289999-999987598899986756724746------89999999999851897179984572457889
Q 537021.9.peg.3 11 EILEQVL-PFVQFYENETIVVKYGGHVMNCTD------LSKDFVNDIALLKKSNITPVIVHGGGPQIGAV 73 (150)
Q Consensus 11 ~~l~ea~-pYi~~~r~ktiVIK~GG~~l~d~~------l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~ 73 (150)
.+|+++. |.++.|+=+.+|+-.|-++..++. ..+.+.+-...+...+.++++|.|||-.++..
T Consensus 229 ~~~~~~i~~~~~~f~Pd~IvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~~~p~~~~~~GGY~~~~~ 298 (364)
T d1t64a_ 229 QICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANT 298 (364)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCSTTBTTCTTCCCCBCHHHHHHHHHHHHTTCCEEEEECCCCCSHHHH
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH
T ss_conf 9999766788625799889998971477899777872799899999999983599879997988887899
No 28
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]}
Probab=47.28 E-value=8.6 Score=16.77 Aligned_cols=44 Identities=5% Similarity=-0.072 Sum_probs=32.0
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEECCCH-------HHHHHHHHCCCCC
Q ss_conf 4746899999999998518971799845724-------5788999708981
Q 537021.9.peg.3 38 NCTDLSKDFVNDIALLKKSNITPVIVHGGGP-------QIGAVLEKMGIKS 81 (150)
Q Consensus 38 ~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~-------qI~~~l~~~gi~~ 81 (150)
.|++..+.+++.++.+-.--.+|+|+-|+|- ++.+..++.+++.
T Consensus 10 ~~~~~l~a~~~~a~~~l~~AkrP~il~G~gv~~~~a~~~l~~l~e~~~iPv 60 (161)
T d1ovma1 10 ADSACLKAFRDAAENKLAMSKRTALLADFLVLRHGLKHALQKWVKEVPMAH 60 (161)
T ss_dssp CCHHHHHHHHHHHHHHHHTCSCEEEEECHHHHHTTCHHHHHHHHHHSCCEE
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf 998999999999999998289968998959375506999999999649659
No 29
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]}
Probab=42.05 E-value=10 Score=16.26 Aligned_cols=73 Identities=14% Similarity=0.068 Sum_probs=53.4
Q ss_pred CCCHHHHHH-HHHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCE
Q ss_conf 062289999-99998759889998675672474689999999999851897179984572457889997089811
Q 537021.9.peg.3 9 QAEILEQVL-PFVQFYENETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSK 82 (150)
Q Consensus 9 ~a~~l~ea~-pYi~~~r~ktiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~ 82 (150)
.++-|++.. ..+..-..+.+||-+.+.-..|......|.+-...++..|.++ .+.|-.|++-+.++..|+...
T Consensus 27 ~~~~~~~~l~~~~~~~~~~~vvid~~~v~~iDssg~~~l~~~~~~~~~~~~~l-~l~~~~~~v~~~l~~~gl~~~ 100 (110)
T d1vc1a_ 27 NSSELKEQLRNFISTTSKKKIVLDLSSVSYMDSAGLGTLVVILKDAKINGKEF-ILSSLKESISRILKLTHLDKI 100 (110)
T ss_dssp THHHHHHHHHHHHHHCCCSEEEEEEEECCCBCHHHHHHHHHHHHHHHHTTCEE-EEESCCHHHHHHHHHHTGGGT
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEE-EEEECCHHHHHHHHHCCCCCE
T ss_conf 99999999998874589879999989997658799999999999999689979-999499999999998599865
No 30
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]}
Probab=41.13 E-value=11 Score=16.17 Aligned_cols=74 Identities=14% Similarity=0.125 Sum_probs=53.6
Q ss_pred CCCHHHHH-HHHHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEE
Q ss_conf 06228999-9999987598899986756724746899999999998518971799845724578899970898115
Q 537021.9.peg.3 9 QAEILEQV-LPFVQFYENETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKF 83 (150)
Q Consensus 9 ~a~~l~ea-~pYi~~~r~ktiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~ 83 (150)
.++-|++. .+++..-.-+.+|+-+.+--..|......+++-...++..|.+ +.++|-.|++.+.++..|+...|
T Consensus 25 ~~~~~~~~l~~~~~~~~~~~iilDls~v~~iDssg~~~L~~~~~~~~~~g~~-l~l~~~~~~v~~~l~~~gl~~~~ 99 (115)
T d1th8b_ 25 TAEELREQVTDVLENRAIRHIVLNLGQLTFMDSSGLGVILGRYKQIKNVGGQ-MVVCAVSPAVKRLFDMSGLFKII 99 (115)
T ss_dssp HHHHHHHHHHHHHHSSCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCC-EEEESCCHHHHHHHHHHTGGGTS
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHCCCCCEE
T ss_conf 9999999999998518997999998789878879999999999999968998-99997899999999984998646
No 31
>d1ul1x2 c.120.1.2 (X:2-217) Flap endonuclease-1 (Fen-1 nuclease) {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.75 E-value=11 Score=16.03 Aligned_cols=26 Identities=23% Similarity=0.382 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCHH
Q ss_conf 99999999985189717998457245
Q 537021.9.peg.3 44 KDFVNDIALLKKSNITPVIVHGGGPQ 69 (150)
Q Consensus 44 ~~~~~dI~ll~~~G~k~ViVHGgg~q 69 (150)
..++..+..|...|++||.|+.|.+.
T Consensus 64 ~~~~~~~~~l~~~~I~pifVFDG~~~ 89 (216)
T d1ul1x2 64 MGMFYRTIRMMENGIKPVYVFDGKPP 89 (216)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCSCC
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf 99999999999769869999768888
No 32
>d1c3pa_ c.42.1.2 (A:) HDAC homologue {Aquifex aeolicus [TaxId: 63363]}
Probab=39.23 E-value=11 Score=15.98 Aligned_cols=63 Identities=19% Similarity=0.237 Sum_probs=42.8
Q ss_pred HHHHH-HHHHHHHCCCEEEEEECHHHHCCHHH------HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
Q ss_conf 28999-99999875988999867567247468------99999999998518971799845724578899
Q 537021.9.peg.3 12 ILEQV-LPFVQFYENETIVVKYGGHVMNCTDL------SKDFVNDIALLKKSNITPVIVHGGGPQIGAVL 74 (150)
Q Consensus 12 ~l~ea-~pYi~~~r~ktiVIK~GG~~l~d~~l------~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l 74 (150)
+|++. .|.+..|+=..+||-.|-++..++.+ .+.+..-...+..++.++++|.|||-..+...
T Consensus 233 ~~~~~l~p~~~~f~Pd~IvvsaG~D~~~~Dplg~l~lt~~~~~~~~~~~~~~~~~~~~vleGGY~~~~~a 302 (372)
T d1c3pa_ 233 ALEKSLEIVKEVFEPEVYLLQLGTDPLLEDYLSKFNLSNVAFLKAFNIVREVFGEGVYLGGGGYHPYALA 302 (372)
T ss_dssp HHHHHHHHHHHHCCCSEEEEECCSTTBTTCTTCSCCBCHHHHHHHHHHHHHHHCSCEEECCCCCCHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH
T ss_conf 9998679999866976899978816677686568868888999999999985899699975878588999
No 33
>d1mioa_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Clostridium pasteurianum [TaxId: 1501]}
Probab=38.30 E-value=12 Score=15.89 Aligned_cols=51 Identities=18% Similarity=0.260 Sum_probs=37.1
Q ss_pred HHHHCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 232206228999999998759889998675672474689999999999851897179984
Q 537021.9.peg.3 5 IYQFQAEILEQVLPFVQFYENETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVH 64 (150)
Q Consensus 5 ~~~~~a~~l~ea~pYi~~~r~ktiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVH 64 (150)
|.+.++.+.....+|-.++.||.++|-.||.-. -.++ .+|..+|+.+|.+.
T Consensus 315 I~~e~~~~~~~l~~~~~~L~GKrv~i~~g~~~~------~~~~---~~l~elGmevv~~g 365 (525)
T d1mioa_ 315 IAEEIAAIQDDLDYFKEKLQGKTACLYVGGSRS------HTYM---NMLKSFGVDSLVAG 365 (525)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEEESSSHH------HHHH---HHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHH------HHHH---HHHHHCCCEEEEEE
T ss_conf 999999999999999976079865883685378------9999---99998699699854
No 34
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]}
Probab=36.41 E-value=13 Score=15.70 Aligned_cols=42 Identities=7% Similarity=-0.017 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEECCCH-------HHHHHHHHCCCC
Q ss_conf 746899999999998518971799845724-------578899970898
Q 537021.9.peg.3 39 CTDLSKDFVNDIALLKKSNITPVIVHGGGP-------QIGAVLEKMGIK 80 (150)
Q Consensus 39 d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~-------qI~~~l~~~gi~ 80 (150)
|+..++..++.++.+-.--.+|+|+-|+|- ++.+..+++|++
T Consensus 4 d~~~l~~~v~~~~~~l~~AkrPvIi~G~g~~~~~a~~~l~~lae~~~~P 52 (175)
T d1zpda1 4 DEASLNAAVDETLKFIANRDKVAVLVGSKLRAAGAEEAAVKFTDALGGA 52 (175)
T ss_dssp CHHHHHHHHHHHHHHHTTCSCEEEEECTTTTTTTCHHHHHHHHHHHCCC
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCEE
T ss_conf 7699999999999999828997999896833220299999999862345
No 35
>d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]}
Probab=36.34 E-value=13 Score=15.69 Aligned_cols=58 Identities=24% Similarity=0.362 Sum_probs=35.3
Q ss_pred CHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEC--------CCHHHHHHHHHCCCCCEEECC-CCCCCHH
Q ss_conf 756724746899999999998518971799845--------724578899970898115578-3466124
Q 537021.9.peg.3 33 GGHVMNCTDLSKDFVNDIALLKKSNITPVIVHG--------GGPQIGAVLEKMGIKSKFENG-LRITDQQ 93 (150)
Q Consensus 33 GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHG--------gg~qI~~~l~~~gi~~~~v~G-~RVTd~~ 93 (150)
||-...+..+.+.-.+=.......|+++++-|| |||.=... +..++.-++| +|+|-.-
T Consensus 574 gG~laa~W~ly~Aq~~L~~v~~~~gv~l~~FHGRGGsvgRGGGPt~~ai---~sqP~gs~~g~ir~TeQG 640 (936)
T d1jqoa_ 574 AGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTHLAI---LSQPPDTINGSIRVTVQG 640 (936)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGGGTCCCHHHHH---HTSCTTSCTTEEEEEEEH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHH---HHCCCCCCCCCEEEEEEE
T ss_conf 5788888899999999999999839638997067886556789768899---858898857745887521
No 36
>d1l1sa_ c.114.1.1 (A:) Hypothetical protein MTH1491 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=36.15 E-value=13 Score=15.67 Aligned_cols=85 Identities=13% Similarity=0.171 Sum_probs=53.9
Q ss_pred CCHHHHHHHHHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCC-EEECCCC
Q ss_conf 622899999999875988999867567247468999999999985189717998457245788999708981-1557834
Q 537021.9.peg.3 10 AEILEQVLPFVQFYENETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKS-KFENGLR 88 (150)
Q Consensus 10 a~~l~ea~pYi~~~r~ktiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~-~~v~G~R 88 (150)
...|..+.-+++.+.+-.|+|-+-|..+..-..-..+.+.+..|...|.++.+-. ..|+..+++. ....|..
T Consensus 17 ~~~l~~~~n~~~~~~~~~i~vV~~G~~v~~l~~~~~~~~~i~~L~~~gV~~~~C~-------~sl~~~~i~~~~l~~~v~ 89 (111)
T d1l1sa_ 17 LLLISNVRNLMADLESVRIEVVAYSMGVNVLRRDSEYSGDVSELTGQGVRFCACS-------NTLRASGMDGDDLLEGVD 89 (111)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEEECGGGGGGGBTTCTTHHHHHHHHHTTCEEEEEH-------HHHHHTTCCGGGBCTTCE
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHCCCHHHHHHHHHHHCCCEEEECH-------HHHHHCCCCHHHCCCCCE
T ss_conf 9999999999842889749999955389999819846999999998799899646-------899882999668488888
Q ss_pred CCCHHHHHHHHHH
Q ss_conf 6612489999999
Q 537021.9.peg.3 89 ITDQQTAEVVEMV 101 (150)
Q Consensus 89 VTd~~tl~iv~~v 101 (150)
+.+....++++.-
T Consensus 90 ~vpsgv~~l~~lQ 102 (111)
T d1l1sa_ 90 VVSSGVGHIVRRQ 102 (111)
T ss_dssp EESCHHHHHHHHH
T ss_pred EECHHHHHHHHHH
T ss_conf 9434899999999
No 37
>d1u9ca_ c.23.16.2 (A:) GK2698 ortholog {Bacillus stearothermophilus [TaxId: 1422]}
Probab=31.88 E-value=15 Score=15.24 Aligned_cols=54 Identities=19% Similarity=0.248 Sum_probs=36.9
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE------EEEEEECCEEEEEE
Q ss_conf 5578346612489999999741668999999982899768------77865589899997
Q 537021.9.peg.3 83 FENGLRITDQQTAEVVEMVLAGSINKKIVSLINQTGTQAI------GICGKDGNMVFAEK 136 (150)
Q Consensus 83 ~v~G~RVTd~~tl~iv~~vL~G~vn~~lv~~L~~~g~~av------glsg~dg~li~a~~ 136 (150)
.+.|.|+|.-...+--..-+.+.+...+...|...|.+=. ....+|||+|+++-
T Consensus 143 ll~Gk~~T~~p~~~e~~~~~~~~~p~~~~~~l~~~Ga~y~~~~~~~~~Vv~Dg~lITg~~ 202 (221)
T d1u9ca_ 143 IVKGKTVTSFTDEEEREVGLDVHMPFLLESTLRLRGANFVRGGKWTDFSVRDGNLITGQN 202 (221)
T ss_dssp TTTTCEECCSCHHHHHHHTCGGGSSSCHHHHHHHTTCEECCCSTTSCCEEEETTEEEECS
T ss_pred EECCCEEECCCCHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEECCEEECCC
T ss_conf 257746631698898640322101256899999879888406888887898799887878
No 38
>d1vhva_ c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=31.73 E-value=15 Score=15.22 Aligned_cols=63 Identities=14% Similarity=0.194 Sum_probs=43.7
Q ss_pred HHHHHHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCE
Q ss_conf 99999998759889998675672474689999999999851897179984572457889997089811
Q 537021.9.peg.3 15 QVLPFVQFYENETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSK 82 (150)
Q Consensus 15 ea~pYi~~~r~ktiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~ 82 (150)
++..-+...+++.+|.-.+|+.+.- .....-+..+...|+.+-+|+|-.. +.......|++..
T Consensus 65 ~~~~i~~~~~~~~vv~L~~GDP~i~----~~~~~l~~~~~~~gi~vevvPGiSs-~~aaaa~~gl~~~ 127 (251)
T d1vhva_ 65 NSFRLIERAKSKSVVLLVPGDPMVA----TTHSAIKLEAERKGVKTRIIHGASI-STAVCGLTGLHNY 127 (251)
T ss_dssp THHHHHHHHTTSEEEEEESBCTTSS----SHHHHHHHHHHHTTCCEEEECCCCH-HHHHHHHHCCCGG
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCC----CHHHHHHHHHHHCCCCCEEEECCHH-HHHHHHHHCCCCC
T ss_conf 8999998743894899956875556----4378999999975998679955309-9999998389754
No 39
>d1n57a_ c.23.16.2 (A:) HSP31 (HchA; YedU) {Escherichia coli [TaxId: 562]}
Probab=29.58 E-value=16 Score=14.99 Aligned_cols=106 Identities=20% Similarity=0.177 Sum_probs=51.4
Q ss_pred CEEEEEECHHH-HCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHH---
Q ss_conf 88999867567-24746899999999998518971799845724578899970898115578346612489999999---
Q 537021.9.peg.3 26 ETIVVKYGGHV-MNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFENGLRITDQQTAEVVEMV--- 101 (150)
Q Consensus 26 ktiVIK~GG~~-l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~v~G~RVTd~~tl~iv~~v--- 101 (150)
=-.|+--||.. |.|-.--+.+.+=+.-.+..| ++|.--.-||.+= +...+ ....+.|+|+|--...+-..+-
T Consensus 142 Ydav~iPGGhG~~~dL~~~~~l~~ll~~~~~~g-k~vaaICHGPa~L--l~a~~-g~~l~~Gk~vT~f~~~eE~~~~~~~ 217 (279)
T d1n57a_ 142 YAAIFVPGGHGALIGLPESQDVAAALQWAIKND-RFVISLCHGPAAF--LALRH-GDNPLNGYSICAFPDAADKQTPEIG 217 (279)
T ss_dssp EEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTT-CEEEEETTGGGGG--GGGTT-SCCTTTTCEECCCCGGGGGTTTTTT
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC-CCCEECCCCCHHH--HHCCC-CCCCCCCEEEEECCCHHHHCCCHHC
T ss_conf 528995588640334167889999999999739-9503011110011--12036-7754488179636988983000101
Q ss_pred -HHHHHHHHHHHHHHHCCCCEE-----EEEEEECCEEEEE
Q ss_conf -741668999999982899768-----7786558989999
Q 537021.9.peg.3 102 -LAGSINKKIVSLINQTGTQAI-----GICGKDGNMVFAE 135 (150)
Q Consensus 102 -L~G~vn~~lv~~L~~~g~~av-----glsg~dg~li~a~ 135 (150)
+-+.+-..+...|.+.|.+-+ +-..+|+|+|+++
T Consensus 218 ~~p~~~~~~le~~L~~~Ga~~~~~~~~~~Vv~D~~LITGq 257 (279)
T d1n57a_ 218 YMPGHLTWYFGEELKKMGMNIINDDITGRVHKDRKLLTGD 257 (279)
T ss_dssp SSSSCCSSCHHHHHHHTTCEECCSSCSCCEEEETTEEEES
T ss_pred CCCCCCCCCHHHHHHHCCCEEECCCCCCCEEEECCEEECC
T ss_conf 4764443239999997689787789987879729878697
No 40
>d3c10a1 c.42.1.2 (A:515-900) Histone deacetylase 7, HDAC7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.98 E-value=17 Score=14.92 Aligned_cols=64 Identities=17% Similarity=0.231 Sum_probs=41.6
Q ss_pred HHHHH-HHHHHHHCCCEEEEEECHHHHCCH--H-----H-HHHHHHHHHHHHHC-CCCEEEEECCCHHHHHHHH
Q ss_conf 28999-999998759889998675672474--6-----8-99999999998518-9717998457245788999
Q 537021.9.peg.3 12 ILEQV-LPFVQFYENETIVVKYGGHVMNCT--D-----L-SKDFVNDIALLKKS-NITPVIVHGGGPQIGAVLE 75 (150)
Q Consensus 12 ~l~ea-~pYi~~~r~ktiVIK~GG~~l~d~--~-----l-~~~~~~dI~ll~~~-G~k~ViVHGgg~qI~~~l~ 75 (150)
.|+++ .|-++.|+=..+||-.|-++..++ . + .+.+..-...+..+ +.++|+|.+||-.++...+
T Consensus 263 ~~~~~l~~~~~~f~PdlIvvsaG~D~~~~D~~pLg~l~lt~~~~~~~~~~l~~~~~~~vv~vleGGY~~~~l~~ 336 (386)
T d3c10a1 263 AFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICD 336 (386)
T ss_dssp HHHHTHHHHHHHHCCSEEEEEECCTTBTTCCGGGCCCBBCHHHHHHHHHHHTTSGGGCEEEEECSCCCHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
T ss_conf 99999999998669988999688253346753563675589999999999998739987999688888658999
No 41
>d1p90a_ c.55.5.2 (A:) NafY core domain {Azotobacter vinelandii [TaxId: 354]}
Probab=28.84 E-value=17 Score=14.91 Aligned_cols=53 Identities=19% Similarity=0.188 Sum_probs=37.8
Q ss_pred HHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 985189717998457245788999708981155783466124899999997416
Q 537021.9.peg.3 52 LLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFENGLRITDQQTAEVVEMVLAGS 105 (150)
Q Consensus 52 ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~v~G~RVTd~~tl~iv~~vL~G~ 105 (150)
++..-|..+|++-+-|+..-+.|++.||++-.... .-|-++.++..+..|.|.
T Consensus 62 ~~~~~~~~vvi~~~iG~~a~~~L~~~GI~vi~~~~-~~~ie~al~~l~~~l~~~ 114 (123)
T d1p90a_ 62 VEQIQDCQVLYVVSIGGPAAAKVVRAGIHPLKKPK-GCAAQEAIAELQTVMAGS 114 (123)
T ss_dssp HHHTTTCSEEEESBCCHHHHHHHHHTTCEEEECTT-CEEHHHHHHHHHHHHHSC
T ss_pred HHHHCCCCEEEECCCCHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHHHCCC
T ss_conf 75307986999877786389999978958999189-984999999999986779
No 42
>d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae [TaxId: 485]}
Probab=28.45 E-value=17 Score=14.87 Aligned_cols=14 Identities=36% Similarity=0.444 Sum_probs=5.5
Q ss_pred CHHHHHHHHHHHHC
Q ss_conf 22899999999875
Q 537021.9.peg.3 11 EILEQVLPFVQFYE 24 (150)
Q Consensus 11 ~~l~ea~pYi~~~r 24 (150)
+++.-+...+.+..
T Consensus 32 pli~~~i~~~~~~~ 45 (226)
T d1vgwa_ 32 TVLEHVLGIFERHE 45 (226)
T ss_dssp EHHHHHHHHHHTCT
T ss_pred EHHHHHHHHHHHCC
T ss_conf 89999999998678
No 43
>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}
Probab=27.15 E-value=15 Score=15.28 Aligned_cols=65 Identities=23% Similarity=0.296 Sum_probs=36.5
Q ss_pred CEEEEEECHHHHCCHH--HHHHHHHHHHHHHHCCCCEEEEECCCH-HHHHHHHHCCCCCEEE--CCCCCC
Q ss_conf 8899986756724746--899999999998518971799845724-5788999708981155--783466
Q 537021.9.peg.3 26 ETIVVKYGGHVMNCTD--LSKDFVNDIALLKKSNITPVIVHGGGP-QIGAVLEKMGIKSKFE--NGLRIT 90 (150)
Q Consensus 26 ktiVIK~GG~~l~d~~--l~~~~~~dI~ll~~~G~k~ViVHGgg~-qI~~~l~~~gi~~~~v--~G~RVT 90 (150)
|.|+.=+.|..+.+.. ..+...+.+..|+..|++++++-|-.. .+...+++++...-++ +|-.+.
T Consensus 3 Kli~~DlDGTLl~~~~~~~~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~ 72 (269)
T d1rlma_ 3 KVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVY 72 (269)
T ss_dssp CEEEECCCCCCSCTTSCCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEE
T ss_pred EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECEEEEE
T ss_conf 9999947756727998399699999999999789989999599989999999982866626741216999
No 44
>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=27.03 E-value=18 Score=14.71 Aligned_cols=65 Identities=12% Similarity=0.082 Sum_probs=37.8
Q ss_pred CEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCH-HHHHHHHHCCCCCEEE--CCCCCCC
Q ss_conf 8899986756724746899999999998518971799845724-5788999708981155--7834661
Q 537021.9.peg.3 26 ETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGP-QIGAVLEKMGIKSKFE--NGLRITD 91 (150)
Q Consensus 26 ktiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~-qI~~~l~~~gi~~~~v--~G~RVTd 91 (150)
|.++.=+.|..+.+.. .....+.|..|+..|++++++-|=.+ .+...+++.+....++ +|-.+.+
T Consensus 3 Kli~~DlDGTLl~~~~-~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~ 70 (243)
T d1wzca1 3 RLIFLDIDKTLIPGYE-PDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFI 70 (243)
T ss_dssp EEEEECCBTTTBSSSC-SGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEE
T ss_pred EEEEEECCCCCCCCCC-CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEC
T ss_conf 7999927777789998-8899999999998899999991988899999999836442100147848970
No 45
>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=27.00 E-value=18 Score=14.70 Aligned_cols=80 Identities=14% Similarity=0.087 Sum_probs=51.0
Q ss_pred HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEEC-------CCCCCCHHHHHHHHHHH-------HHHHHHHHH
Q ss_conf 9999999851897179984572457889997089811557-------83466124899999997-------416689999
Q 537021.9.peg.3 46 FVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFEN-------GLRITDQQTAEVVEMVL-------AGSINKKIV 111 (150)
Q Consensus 46 ~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~v~-------G~RVTd~~tl~iv~~vL-------~G~vn~~lv 111 (150)
+.+-+..|+..|+++.++-++...+.+.+++.++...|.. +.+-.+++....+..-+ .|.-..++.
T Consensus 84 v~~~l~~l~~~g~~~~i~Sn~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~l~vgDs~~Di~ 163 (187)
T d2fi1a1 84 VSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISSGLVIGDRPIDIE 163 (187)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCTHHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCSSEEEEESSHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHH
T ss_conf 68888877764212233455762101345542022122221222223456888999999999849997699907999999
Q ss_pred HHHHHCCCCEEEEEE
Q ss_conf 999828997687786
Q 537021.9.peg.3 112 SLINQTGTQAIGICG 126 (150)
Q Consensus 112 ~~L~~~g~~avglsg 126 (150)
++ ++.|++.+.+++
T Consensus 164 aA-~~aG~~~i~v~~ 177 (187)
T d2fi1a1 164 AG-QAAGLDTHLFTS 177 (187)
T ss_dssp HH-HHTTCEEEECSC
T ss_pred HH-HHCCCEEEEECC
T ss_conf 99-985997999999
No 46
>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}
Probab=26.46 E-value=18 Score=14.64 Aligned_cols=95 Identities=17% Similarity=0.239 Sum_probs=59.2
Q ss_pred CCCEEEEEECHHHHCCHHHHHH-HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECCC---CCCCHHHHHHHH
Q ss_conf 5988999867567247468999-999999985189717998457245788999708981155783---466124899999
Q 537021.9.peg.3 24 ENETIVVKYGGHVMNCTDLSKD-FVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFENGL---RITDQQTAEVVE 99 (150)
Q Consensus 24 r~ktiVIK~GG~~l~d~~l~~~-~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~v~G~---RVTd~~tl~iv~ 99 (150)
+.|++||--|..-+-...-|+- -.+.+..|+..|+++|+|- ..|. ..+ ..+..-+-+ -+|-+..+++++
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN-~NPe--TVs----td~d~aD~lYfeplt~e~v~~Ii~ 76 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN-CNPE--TVS----TDYDTSDRLYFEPVTLEDVLEIVR 76 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEEC-CCTT--SST----TSTTSSSEEECCCCSHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE-CCHH--HHH----CCHHHCCCEEECCCCHHHHHHHHH
T ss_conf 877999877847116630020889999999996698479971-6766--530----686444864881588999999999
Q ss_pred HH--------HHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 99--------741668999999982899768778
Q 537021.9.peg.3 100 MV--------LAGSINKKIVSLINQTGTQAIGIC 125 (150)
Q Consensus 100 ~v--------L~G~vn~~lv~~L~~~g~~avgls 125 (150)
.. +.||.--.|...|.+.|++-.|-+
T Consensus 77 ~E~p~~ii~~~GGQtalnla~~L~~~gv~iLGt~ 110 (121)
T d1a9xa4 77 IEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTS 110 (121)
T ss_dssp HHCCSEEECSSSTHHHHTTHHHHHHTTCCBCSSC
T ss_pred HHCCCEEEEEHHHHHHHHHHHHHHHCCCCEECCC
T ss_conf 7699879953321317789999999699488979
No 47
>d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}
Probab=25.18 E-value=17 Score=14.94 Aligned_cols=79 Identities=13% Similarity=0.157 Sum_probs=33.9
Q ss_pred CHHHHHHHHHHHHCC-CEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHH---HHHHHHHCCCCCEEE--
Q ss_conf 228999999998759-88999867567247468999999999985189717998457245---788999708981155--
Q 537021.9.peg.3 11 EILEQVLPFVQFYEN-ETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQ---IGAVLEKMGIKSKFE-- 84 (150)
Q Consensus 11 ~~l~ea~pYi~~~r~-ktiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~q---I~~~l~~~gi~~~~v-- 84 (150)
+++..++--+.++.. +.+||-.+-. + ..+++.+ ....+..+.++.||... +-..++.....+.++
T Consensus 33 pli~~~l~~~~~~~~~~~Iivv~~~~---~----~~~~~~~--~~~~~~~~~~~~gg~~r~~sv~~~l~~~~~~~~~Vli 103 (226)
T d1w77a1 33 PIALYSFFTFSRMPEVKEIVVVCDPF---F----RDIFEEY--EESIDVDLRFAIPGKERQDSVYSGLQEIDVNSELVCI 103 (226)
T ss_dssp EHHHHHHHHHHTCTTEEEEEEECCGG---G----THHHHTT--TTSCSSEEEEECCCSSHHHHHHHHHHTSCTTCSEEEE
T ss_pred EHHHHHHHHHHHHCCCCCEEECCCHH---H----HHHHHCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEE
T ss_conf 69999999998615443134115244---4----2333202--2222222222332113355556667653025532022
Q ss_pred -CCC-CCCCHHHHHHH
Q ss_conf -783-46612489999
Q 537021.9.peg.3 85 -NGL-RITDQQTAEVV 98 (150)
Q Consensus 85 -~G~-RVTd~~tl~iv 98 (150)
+|- ...++++++-+
T Consensus 104 ~d~~~P~i~~~~i~~l 119 (226)
T d1w77a1 104 HDSARPLVNTEDVEKV 119 (226)
T ss_dssp EETTCTTCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHH
T ss_conf 1332303668775434
No 48
>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.64 E-value=20 Score=14.43 Aligned_cols=94 Identities=16% Similarity=0.247 Sum_probs=50.1
Q ss_pred HHHHHHHHHCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCCCCHHH
Q ss_conf 99999998759889998675672474689999999999851897179984572457889997089811557834661248
Q 537021.9.peg.3 15 QVLPFVQFYENETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFENGLRITDQQT 94 (150)
Q Consensus 15 ea~pYi~~~r~ktiVIK~GG~~l~d~~l~~~~~~dI~ll~~~G~k~ViVHGgg~qI~~~l~~~gi~~~~v~G~RVTd~~t 94 (150)
+....+++++=. +|-++. +.... ...+-+-+.+|+..|.++.++-||++--....+.. +-+.|. |-.+..+++
T Consensus 48 ~~~~~~~~~~~d--~i~lS~--l~~~~-~~~~~~~~~~l~~~g~~~~vivGG~~~~~~~~~~~-~~~~y~-gad~ya~DA 120 (156)
T d3bula2 48 KILRTAKEVNAD--LIGLSG--LITPS-LDEMVNVAKEMERQGFTIPLLIGGATTSKAHTAVK-IEQNYS-GPTVYVQNA 120 (156)
T ss_dssp HHHHHHHHHTCS--EEEEEC--CSTHH-HHHHHHHHHHHHHTTCCSCEEEESTTCCHHHHHHH-TGGGCS-SCEEECCSH
T ss_pred HHHHHHHHHCCC--EEEEEC--CCCCC-HHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHH-HCCCCC-CCEEECCCH
T ss_conf 999999963998--899964--54232-68899999999732566238985044550577765-313556-660123677
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHH
Q ss_conf ---999999974166899999998
Q 537021.9.peg.3 95 ---AEVVEMVLAGSINKKIVSLIN 115 (150)
Q Consensus 95 ---l~iv~~vL~G~vn~~lv~~L~ 115 (150)
++++...+...-..++.+.++
T Consensus 121 ~~av~~a~~Ll~~~~~~~~~~~~~ 144 (156)
T d3bula2 121 SRTVGVVAALLSDTQRDDFVARTR 144 (156)
T ss_dssp HHHHHHHHHHTCTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 899999999958611699999999
No 49
>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}
Probab=24.36 E-value=20 Score=14.39 Aligned_cols=52 Identities=17% Similarity=0.144 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCHH-HHHHHHHCCCCCEEECCCCCCCHHH
Q ss_conf 999999999985189717998457245-7889997089811557834661248
Q 537021.9.peg.3 43 SKDFVNDIALLKKSNITPVIVHGGGPQ-IGAVLEKMGIKSKFENGLRITDQQT 94 (150)
Q Consensus 43 ~~~~~~dI~ll~~~G~k~ViVHGgg~q-I~~~l~~~gi~~~~v~G~RVTd~~t 94 (150)
++.+.+-+..|+..|+++.++-|..+. ....++++|+.+.|-.-.-+|..+.
T Consensus 217 ~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~ 269 (380)
T d1qyia_ 217 VDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDV 269 (380)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCHH
T ss_conf 36399999999987995999889979999999998199534785058744133
No 50
>d1v7za_ c.125.1.1 (A:) Creatininase {Pseudomonas putida [TaxId: 303]}
Probab=23.89 E-value=21 Score=14.34 Aligned_cols=38 Identities=18% Similarity=0.148 Sum_probs=27.9
Q ss_pred ECHHHHCCHHHHHHHHHHHH-HHHHCCCC-EEEE--ECCCHH
Q ss_conf 67567247468999999999-98518971-7998--457245
Q 537021.9.peg.3 32 YGGHVMNCTDLSKDFVNDIA-LLKKSNIT-PVIV--HGGGPQ 69 (150)
Q Consensus 32 ~GG~~l~d~~l~~~~~~dI~-ll~~~G~k-~ViV--HGgg~q 69 (150)
++|.+-.+++.+.+++.||. -|...|.+ +|+| |||..+
T Consensus 82 fPGTisl~~~t~~~~l~di~~sl~~~Gfr~ivivNgHgGN~~ 123 (257)
T d1v7za_ 82 FPGTTSLDGATLTGTVQDIIRELARHGARRLVLMNGHYENSM 123 (257)
T ss_dssp SSSCBCBCHHHHHHHHHHHHHHHHHHTCCEEEEEECSGGGHH
T ss_pred CCCEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCH
T ss_conf 785476077889999999999999708856999940677737
No 51
>d1d4oa_ c.31.1.4 (A:) Transhydrogenase domain III (dIII) {Cow (Bos taurus) [TaxId: 9913]}
Probab=23.65 E-value=21 Score=14.31 Aligned_cols=16 Identities=0% Similarity=0.171 Sum_probs=7.4
Q ss_pred CCEEEEEECCCCCCCCC
Q ss_conf 89899997475211179
Q 537021.9.peg.3 129 GNMVFAEKARHSLRLSP 145 (150)
Q Consensus 129 g~li~a~~~~~~lg~vg 145 (150)
.+.|..|| +..-||-|
T Consensus 130 k~viv~KR-sm~~GyaG 145 (177)
T d1d4oa_ 130 KQVIVMKR-SLGVGYAA 145 (177)
T ss_dssp SCEEEEES-SSCCCTTC
T ss_pred CEEEEEEC-CCCCCCCC
T ss_conf 88999977-78788667
No 52
>d1pnoa_ c.31.1.4 (A:) Transhydrogenase domain III (dIII) {Rhodospirillum rubrum [TaxId: 1085]}
Probab=22.86 E-value=21 Score=14.21 Aligned_cols=36 Identities=31% Similarity=0.523 Sum_probs=22.5
Q ss_pred HHHHHHHHCCCCEEEEECCCH----------HHHHHHHHCCCCCEE
Q ss_conf 999998518971799845724----------578899970898115
Q 537021.9.peg.3 48 NDIALLKKSNITPVIVHGGGP----------QIGAVLEKMGIKSKF 83 (150)
Q Consensus 48 ~dI~ll~~~G~k~ViVHGgg~----------qI~~~l~~~gi~~~~ 83 (150)
+|.+.+-..-.++|||.|-|- ++.+.|++.|++.+|
T Consensus 14 ~d~a~~L~~A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~g~~V~f 59 (180)
T d1pnoa_ 14 EDAAFIMKNASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSY 59 (180)
T ss_dssp HHHHHHHHTCSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 9999999709859997784388888889999999999746764588
No 53
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.38 E-value=23 Score=14.02 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCC--HHHHHHHHHCCCC
Q ss_conf 9999999999851897179984572--4578899970898
Q 537021.9.peg.3 43 SKDFVNDIALLKKSNITPVIVHGGG--PQIGAVLEKMGIK 80 (150)
Q Consensus 43 ~~~~~~dI~ll~~~G~k~ViVHGgg--~qI~~~l~~~gi~ 80 (150)
.+.+.+|+.+++.+|++.|=+|+.. +..=.+++++|+-
T Consensus 35 ~~~~~~d~~~~k~~G~N~iR~~~~~~~~~~~~~cD~~Gil 74 (304)
T d1bhga3 35 WPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIV 74 (304)
T ss_dssp HHHHHHHHHHHHHHTCCEEECTTSCCSSTHHHHHSTTCCE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCE
T ss_conf 9999999999997699899943899869999999860985
No 54
>d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=21.32 E-value=18 Score=14.75 Aligned_cols=67 Identities=7% Similarity=0.021 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHHHCCCEEEEEECHHHHC-----CHHHHHHHHHHHH-HHHHCC--CCEEE-EECCCHHHHHHHHHC
Q ss_conf 2289999999987598899986756724-----7468999999999-985189--71799-845724578899970
Q 537021.9.peg.3 11 EILEQVLPFVQFYENETIVVKYGGHVMN-----CTDLSKDFVNDIA-LLKKSN--ITPVI-VHGGGPQIGAVLEKM 77 (150)
Q Consensus 11 ~~l~ea~pYi~~~r~ktiVIK~GG~~l~-----d~~l~~~~~~dI~-ll~~~G--~k~Vi-VHGgg~qI~~~l~~~ 77 (150)
..++...|++....=..+.+-+.|.=-. +.........|+. ++.... .++++ -|..|-.+...+...
T Consensus 16 ~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvghS~Gg~va~~~a~~ 91 (258)
T d1xkla_ 16 WSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHSLGGMNLGLAMEK 91 (258)
T ss_dssp GGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCSSSCEEEEEETTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 9999999999868998999669999999899877753677788776432102233322211232368999987653
Done!