RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 537021.9.peg.393_1
         (150 letters)



>d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas
           aeruginosa [TaxId: 287]}
          Length = 300

 Score =  131 bits (331), Expect = 2e-32
 Identities = 60/139 (43%), Positives = 93/139 (66%)

Query: 1   MTEKIYQFQAEILEQVLPFVQFYENETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITP 60
           ++       A++L + LP+++ +  +T+V+KYGG+ M   +L   F  D+ L+K   I P
Sbjct: 2   LSRDDAAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINP 61

Query: 61  VIVHGGGPQIGAVLEKMGIKSKFENGLRITDQQTAEVVEMVLAGSINKKIVSLINQTGTQ 120
           V+VHGGGPQIG +L+++ I+S F +G+R+TD  T +VVEMVL G +NK IV+LIN+ G  
Sbjct: 62  VVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGS 121

Query: 121 AIGICGKDGNMVFAEKARH 139
           AIG+ GKD  ++ A+K   
Sbjct: 122 AIGLTGKDAELIRAKKLTV 140


>d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga
           maritima [TaxId: 2336]}
          Length = 282

 Score =  119 bits (298), Expect = 1e-28
 Identities = 56/124 (45%), Positives = 85/124 (68%)

Query: 9   QAEILEQVLPFVQFYENETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGP 68
              +L + LP+++ +  +T V+K+GG  M   +  K F+ DI LLK + I P+IVHGGGP
Sbjct: 5   TVNVLLEALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGP 64

Query: 69  QIGAVLEKMGIKSKFENGLRITDQQTAEVVEMVLAGSINKKIVSLINQTGTQAIGICGKD 128
            I  +++ +GI+  F+NG R+TD++T E+VEMVL G INK+IV  +N  G +A+GICGKD
Sbjct: 65  AISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGKINKEIVMNLNLHGGRAVGICGKD 124

Query: 129 GNMV 132
             ++
Sbjct: 125 SKLI 128


>d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase
           {Mycobacterium tuberculosis [TaxId: 1773]}
          Length = 291

 Score =  104 bits (259), Expect = 5e-24
 Identities = 50/125 (40%), Positives = 80/125 (64%)

Query: 7   QFQAEILEQVLPFVQFYENETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGG 66
             +A++L + LP+++    + +VVKYGG+ M    L + F  D+A L+   I PV+VHGG
Sbjct: 7   HIKAQVLAEALPWLKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGIHPVVVHGG 66

Query: 67  GPQIGAVLEKMGIKSKFENGLRITDQQTAEVVEMVLAGSINKKIVSLINQTGTQAIGICG 126
           GPQI A+L ++GI+  F+ G R+T  +  +V  MVL G + +++V+LIN  G  A+GI G
Sbjct: 67  GPQITAMLRRLGIEGDFKGGFRVTTPEVLDVARMVLFGQVGRELVNLINAHGPYAVGITG 126

Query: 127 KDGNM 131
           +D  +
Sbjct: 127 EDAQL 131


>d1e19a_ c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcus
           furiosus [TaxId: 2261]}
          Length = 313

 Score = 90.7 bits (224), Expect = 5e-20
 Identities = 21/133 (15%), Positives = 39/133 (29%), Gaps = 23/133 (17%)

Query: 27  TIVVKYGGHVMNCTDLS----------KDFVNDIALLKKSNITPVIVHGGGPQIGAVLEK 76
            +V+  GG+ +                +     IA +       VI HG GPQ+G++L  
Sbjct: 3   RVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLH 62

Query: 77  MGIKSKFENGLRITDQQTAEVVEMVLAGS-------------INKKIVSLINQTGTQAIG 123
           M                   + +  +                + KK+V++I QT      
Sbjct: 63  MDAGQATYGIPAQPMDVAGAMSQGWIGYMIQQALKNELRKRGMEKKVVTIITQTIVDKND 122

Query: 124 ICGKDGNMVFAEK 136
              ++        
Sbjct: 123 PAFQNPTKPVGPF 135


>d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli
           [TaxId: 562]}
          Length = 258

 Score = 76.7 bits (187), Expect = 7e-16
 Identities = 28/115 (24%), Positives = 61/115 (53%), Gaps = 1/115 (0%)

Query: 26  ETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITP-VIVHGGGPQIGAVLEKMGIKSKFE 84
             +++K GG +++  +  +   + +   ++S+  P VIVHGGG  +  +++ + +  K +
Sbjct: 3   NPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKK 62

Query: 85  NGLRITDQQTAEVVEMVLAGSINKKIVSLINQTGTQAIGICGKDGNMVFAEKARH 139
           NGLR+T     +++   LAG+ NK +++   +    A+G+   DG+ V   +   
Sbjct: 63  NGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDE 117


>d1b7ba_ c.73.1.1 (A:) Carbamate kinase {Enterococcus faecium
           [TaxId: 1352]}
          Length = 307

 Score = 75.0 bits (183), Expect = 3e-15
 Identities = 23/144 (15%), Positives = 40/144 (27%), Gaps = 31/144 (21%)

Query: 27  TIVVKYGGHVMNCTDLS--------KDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMG 78
            +VV  GG+ +   D S              +  L K     ++ HG GPQ+G +L +  
Sbjct: 3   KMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQ 62

Query: 79  IKSKFENGLRITDQQTA-----------------------EVVEMVLAGSINKKIVSLIN 115
                +N     D   A                       +     +   +         
Sbjct: 63  AADSEKNPAMPLDTCVAMTQGSIGYWLSNALNQELNKAGIKKQVATVLTQVVVDPADEAF 122

Query: 116 QTGTQAIGICGKDGNMVFAEKARH 139
           +  T+ IG    +     A +A  
Sbjct: 123 KNPTKPIGPFLTEAEAKEAMQAGA 146


>d1rypa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
           {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 243

 Score = 31.6 bits (71), Expect = 0.028
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 114 INQTGTQAIGICGKDGNMVFAEKARHSLRLSPNTKK 149
            NQT   ++ + GKD  +V ++K      L P T  
Sbjct: 26  TNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVS 61


>d1irua_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
           {Cow (Bos taurus) [TaxId: 9913]}
          Length = 244

 Score = 30.3 bits (68), Expect = 0.080
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 114 INQTGTQAIGICGKDGNMVFAEK 136
           INQ G  ++ + GKD  ++  +K
Sbjct: 31  INQGGLTSVAVRGKDCAVIVTQK 53


>d1rypf_ d.153.1.4 (F:) Proteasome alpha subunit (non-catalytic)
           {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 233

 Score = 28.9 bits (64), Expect = 0.19
 Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 117 TGTQAIGICGKDGNMVFAEKARHSLRLSPNTKK 149
            G+  +G+      ++ A K R++  LS   KK
Sbjct: 30  QGSVTVGLRSNTHAVLVALK-RNADELSSYQKK 61


>d1iruf_ d.153.1.4 (F:) Proteasome alpha subunit (non-catalytic)
           {Cow (Bos taurus) [TaxId: 9913]}
          Length = 238

 Score = 28.8 bits (64), Expect = 0.21
 Identities = 7/32 (21%), Positives = 13/32 (40%)

Query: 117 TGTQAIGICGKDGNMVFAEKARHSLRLSPNTK 148
            G+  +G+  K   ++ A K   S   +   K
Sbjct: 28  QGSATVGLKSKTHAVLVALKRAQSELAAHQKK 59


>d2ij9a1 c.73.1.3 (A:1-219) Uridylate kinase PyrH {Archaeoglobus
          fulgidus [TaxId: 2234]}
          Length = 219

 Score = 28.3 bits (62), Expect = 0.27
 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 28 IVVKYGGH-VMNCTDLSKDFVNDIALLKKSNITPVIVHGG 66
          +V+  GG  + N ++  ++F   I  + + N   V+V GG
Sbjct: 3  VVLSLGGSVLSNESEKIREFAKTIESVAQQNQVFVVVGGG 42


>d1irug_ d.153.1.4 (G:) Proteasome alpha subunit (non-catalytic)
           {Cow (Bos taurus) [TaxId: 9913]}
          Length = 245

 Score = 28.5 bits (63), Expect = 0.27
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 117 TGTQAIGICGKDGNMVFAEKARHSLRLSPNTKK 149
             + AIGI  KDG +   EK   S      + K
Sbjct: 32  NSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNK 64


>d2akoa1 c.73.1.3 (A:2-251) Glutamate 5-kinase {Campylobacter jejuni
           [TaxId: 197]}
          Length = 250

 Score = 28.1 bits (61), Expect = 0.37
 Identities = 21/118 (17%), Positives = 34/118 (28%), Gaps = 8/118 (6%)

Query: 27  TIVVKYGGHVMN-----CTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKS 81
            IVVK G HV++       +  K+ V  +A L +     ++V      I A   K+ I  
Sbjct: 2   RIVVKVGSHVISEENTLSFERLKNLVAFLAKLME-KYEVILVTSAA--ISAGHTKLDIDR 58

Query: 82  KFENGLRITDQQTAEVVEMVLAGSINKKIVSLINQTGTQAIGICGKDGNMVFAEKARH 139
           K     ++        +  V    + K          T       K            
Sbjct: 59  KNLINKQVLAAIGQPFLISVYNELLAKFNKLGGQILLTGKDFDSRKATKHAKNAIDMM 116


>d2brxa1 c.73.1.3 (A:1-225) Uridylate kinase PyrH {Pyrococcus
           furiosus [TaxId: 2261]}
          Length = 225

 Score = 27.7 bits (60), Expect = 0.46
 Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 5/112 (4%)

Query: 28  IVVKYGGHVMNCTDLSKDFV----NDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKF 83
           IV   GG V+   +   DF+      +  + + +    +V GGG      +E     +  
Sbjct: 3   IVFDIGGSVLVPENPDIDFIKEIAYQLTKVSEDHEV-AVVVGGGKLARKYIEVAEKFNSS 61

Query: 84  ENGLRITDQQTAEVVEMVLAGSINKKIVSLINQTGTQAIGICGKDGNMVFAE 135
           E        Q      M+L  ++ +K   ++ +   +A          V   
Sbjct: 62  ETFKDFIGIQITRANAMLLIAALREKAYPVVVEDFWEAWKAVQLKKIPVMGG 113


>d1j2pa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
           {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
          Length = 243

 Score = 27.7 bits (61), Expect = 0.50
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 117 TGTQAIGICGKDGNMVFAEKARHSLRLSPNTKK 149
            G  AIGI  K+G ++ A+K   S  L  +T +
Sbjct: 30  RGATAIGIKCKEGVILIADKRVGSKLLEKDTIE 62


>d1irub_ d.153.1.4 (B:) Proteasome alpha subunit (non-catalytic)
           {Cow (Bos taurus) [TaxId: 9913]}
          Length = 233

 Score = 27.4 bits (60), Expect = 0.50
 Identities = 7/34 (20%), Positives = 15/34 (44%)

Query: 116 QTGTQAIGICGKDGNMVFAEKARHSLRLSPNTKK 149
             G  ++GI   +G ++  EK + S+     +  
Sbjct: 29  AGGAPSVGIKAANGVVLATEKKQKSILYDERSVH 62


>d1rypb_ d.153.1.4 (B:) Proteasome alpha subunit (non-catalytic)
           {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 250

 Score = 27.4 bits (60), Expect = 0.51
 Identities = 8/33 (24%), Positives = 13/33 (39%)

Query: 117 TGTQAIGICGKDGNMVFAEKARHSLRLSPNTKK 149
            G  ++GI   +G ++  EK   S      T  
Sbjct: 30  QGVTSLGIKATNGVVIATEKKSSSPLAMSETLS 62


>d1yara1 d.153.1.4 (A:13-233) Proteasome alpha subunit
           (non-catalytic) {Archaeon Thermoplasma acidophilum
           [TaxId: 2303]}
          Length = 221

 Score = 27.4 bits (60), Expect = 0.56
 Identities = 7/33 (21%), Positives = 18/33 (54%)

Query: 117 TGTQAIGICGKDGNMVFAEKARHSLRLSPNTKK 149
            G+ A+G+   +G ++ ++K   S  +  N+ +
Sbjct: 21  KGSTALGMKFANGVLLISDKKVRSRLIEQNSIE 53


>d1irud_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic)
           {Cow (Bos taurus) [TaxId: 9913]}
          Length = 243

 Score = 27.3 bits (60), Expect = 0.65
 Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 117 TGTQAIGICGKDGNMVFAEK-ARHSLRLSPNTKK 149
            G+ A+G+ G+D  ++  EK +   L+     +K
Sbjct: 27  KGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRK 60


>d1rypg_ d.153.1.4 (G:) Proteasome alpha subunit (non-catalytic)
           {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 244

 Score = 26.9 bits (59), Expect = 0.71
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 116 QTGTQAIGICGKDGNMVFAEKARHSLRLSPNT 147
           + GT +IGI   DG +   EK   S  L P  
Sbjct: 28  ENGTTSIGIKCNDGVVFAVEKLITSKLLVPQK 59


>d1fcqa_ c.1.8.9 (A:) Bee venom hyaluronidase {Honeybee (Apis
           mellifera) [TaxId: 7460]}
          Length = 321

 Score = 26.7 bits (59), Expect = 0.77
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 9/50 (18%)

Query: 51  ALLKKSNITPVIVHGGGPQIG---AVLEKMG------IKSKFENGLRITD 91
           ALLK  N   V  +GG PQ+G     L+         I  K   G+ + D
Sbjct: 53  ALLKDPNGNVVARNGGVPQLGNLTKHLQVFRDHLINQIPDKSFPGVGVID 102


>d1iru2_ d.153.1.4 (2:) Proteasome beta subunit (catalytic) {Cow
           (Bos taurus) [TaxId: 9913]}
          Length = 217

 Score = 26.6 bits (58), Expect = 0.92
 Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 117 TGTQAIGICGKDGNMVFAEK--ARHSLRLSPNTKK 149
           TGT  +G+  + G ++ A+   +  SL    N  +
Sbjct: 7   TGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISR 41


>d1t94a2 e.8.1.7 (A:75-407) DNA polymerase kappa {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 333

 Score = 26.7 bits (58), Expect = 0.92
 Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 7/51 (13%)

Query: 38  NCTDLSKDFVNDIALLKKSNITPVI-------VHGGGPQIGAVLEKMGIKS 81
            C+D +K       L  +  +   I       V G G     +L+ +GI +
Sbjct: 248 VCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIIT 298


>d1rypc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic)
           {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 244

 Score = 26.6 bits (58), Expect = 0.93
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 117 TGTQAIGICGKDGNMVFAEKARHS--LRLSPNTKK 149
               AIGI   DG ++ AE+   S  L    +T+K
Sbjct: 30  HAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEK 64


>d1iruc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic)
           {Cow (Bos taurus) [TaxId: 9913]}
          Length = 250

 Score = 26.6 bits (58), Expect = 1.0
 Identities = 6/20 (30%), Positives = 10/20 (50%)

Query: 117 TGTQAIGICGKDGNMVFAEK 136
                +GI   DG ++ AE+
Sbjct: 29  HAGTCLGILANDGVLLAAER 48


>d1ls9a_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553)
           {Green alga (Cladophora glomerata) [TaxId: 162068]}
          Length = 91

 Score = 26.4 bits (57), Expect = 1.0
 Identities = 14/78 (17%), Positives = 24/78 (30%)

Query: 32  YGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKMGIKSKFENGLRITD 91
           + G+   C     + V     LKK  I   +  G   +        G  +      R+ +
Sbjct: 13  FAGNCAACHLGGNNSVLADKTLKKDAIEKYLEGGLTLEAIKYQVNNGKGAMPAWADRLDE 72

Query: 92  QQTAEVVEMVLAGSINKK 109
                V   V   ++N K
Sbjct: 73  DDIEAVSNYVYDQAVNSK 90


>d1rype_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic)
           {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 242

 Score = 26.2 bits (57), Expect = 1.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 116 QTGTQAIGICGKDGNMVFAEKARHSLRLSPNTKK 149
           + G+ AIGI  K+G ++  EK   S  L  ++ +
Sbjct: 24  KLGSTAIGIATKEGVVLGVEKRATSPLLESDSIE 57


>d1irue_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic)
           {Cow (Bos taurus) [TaxId: 9913]}
          Length = 234

 Score = 26.1 bits (57), Expect = 1.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 117 TGTQAIGICGKDGNMVFAEKARHSLRLSPNT 147
            G+ AIGI   +G  +  EK   S  + P++
Sbjct: 26  LGSTAIGIQTSEGVCLAVEKRITSPLMEPSS 56


>d1rypd_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic)
           {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 241

 Score = 26.2 bits (57), Expect = 1.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query: 117 TGTQAIGICGKDGNMVFAEK 136
            GT A+G+ GK+  ++  E+
Sbjct: 27  RGTCAVGVKGKNCVVLGCER 46


>d1ryp2_ d.153.1.4 (2:) Proteasome beta subunit (catalytic) {Baker's
           yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 233

 Score = 25.5 bits (55), Expect = 1.9
 Identities = 8/35 (22%), Positives = 16/35 (45%), Gaps = 2/35 (5%)

Query: 117 TGTQAIGICGKDGNMVFAEK--ARHSLRLSPNTKK 149
           TGT  I +   +G ++ A+   +  SL      ++
Sbjct: 7   TGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVER 41


>d1ryph_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Baker's
           yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 205

 Score = 25.1 bits (54), Expect = 2.7
 Identities = 5/20 (25%), Positives = 10/20 (50%)

Query: 117 TGTQAIGICGKDGNMVFAEK 136
            G   + +  KDG ++ A+ 
Sbjct: 8   LGASIMAVTFKDGVILGADS 27


>d1o13a_ c.55.5.1 (A:) Hypothetical protein TM1816 {Thermotoga
           maritima [TaxId: 2336]}
          Length = 107

 Score = 24.9 bits (54), Expect = 2.7
 Identities = 19/87 (21%), Positives = 29/87 (33%), Gaps = 5/87 (5%)

Query: 18  PFVQFYENETIVVKYGGHVMNCTDLSKDFVNDIALLKKSNITPVIVHGGGPQIGAVLEKM 77
           P+  F + +   +       N              +K+     VIV G G +  A  E M
Sbjct: 25  PYFAFVKVKNNAIADISVEENPLAQDHVHGAVPNFVKEKGAELVIVRGIGRRAIAAFEAM 84

Query: 78  GIKSKFENGLRITDQQTAEVVEMVLAG 104
           G+K        +      EVV   L+G
Sbjct: 85  GVKVIKGASGTV-----EEVVNQYLSG 106


>d1im4a_ e.8.1.7 (A:) DinB homolog (DBH) {Archaeon Sulfolobus
           solfataricus [TaxId: 2287]}
          Length = 209

 Score = 24.8 bits (53), Expect = 3.2
 Identities = 5/19 (26%), Positives = 10/19 (52%)

Query: 63  VHGGGPQIGAVLEKMGIKS 81
           + G G  +   L ++GI+ 
Sbjct: 188 IPGIGSVLARRLNELGIQK 206


>d1ryp1_ d.153.1.4 (1:) Proteasome beta subunit (catalytic) {Baker's
           yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 222

 Score = 24.4 bits (52), Expect = 4.6
 Identities = 5/20 (25%), Positives = 10/20 (50%)

Query: 117 TGTQAIGICGKDGNMVFAEK 136
            G   +GI G+D  ++  + 
Sbjct: 8   NGGTILGIAGEDFAVLAGDT 27


>d1iruj_ d.153.1.4 (J:) Proteasome beta subunit (catalytic) {Cow
           (Bos taurus) [TaxId: 9913]}
          Length = 204

 Score = 24.0 bits (51), Expect = 4.9
 Identities = 5/25 (20%), Positives = 14/25 (56%)

Query: 112 SLINQTGTQAIGICGKDGNMVFAEK 136
           S+++  G   + + GK+   + A++
Sbjct: 1   SIMSYNGGAVMAMKGKNCVAIAADR 25


>d1eo1a_ c.55.5.1 (A:) Hypothetical protein MTH1175 {Archaeon
           Methanobacterium thermoautotrophicum [TaxId: 145262]}
          Length = 124

 Score = 24.2 bits (52), Expect = 5.2
 Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 7/93 (7%)

Query: 18  PFVQFYENETIVVKYGGHVMNCTDLSKDFVNDIA--LLKKSNITPVIVHGGGPQIGAVLE 75
           P+    E +   ++    + N +  +          ++  + +  VI    GP    VL 
Sbjct: 24  PYFMIVEMKKGNIESSEVIENPSASASGGAGIRTAQIIANNGVKAVIASSPGPNAFEVLN 83

Query: 76  KMGIKSKFENGLRITDQQTAEVVEMVLAGSINK 108
           ++GIK     G  +      E +++   G++ +
Sbjct: 84  ELGIKIYRATGTSV-----EENLKLFTEGNLEE 111


>d1iru1_ d.153.1.4 (1:) Proteasome beta subunit (catalytic) {Cow
           (Bos taurus) [TaxId: 9913]}
          Length = 213

 Score = 24.1 bits (51), Expect = 5.5
 Identities = 5/20 (25%), Positives = 10/20 (50%)

Query: 117 TGTQAIGICGKDGNMVFAEK 136
            G   + I G+D  +V ++ 
Sbjct: 8   NGGTILAIAGEDFAIVASDT 27


>d1rypj_ d.153.1.4 (J:) Proteasome beta subunit (catalytic) {Baker's
           yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 204

 Score = 23.6 bits (50), Expect = 7.2
 Identities = 4/19 (21%), Positives = 8/19 (42%)

Query: 118 GTQAIGICGKDGNMVFAEK 136
           G   + + GKD   +  + 
Sbjct: 8   GGIVVAMTGKDCVAIACDL 26


>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545,
           C-terminal domain {Sulfolobus solfataricus [TaxId:
           2287]}
          Length = 73

 Score = 23.5 bits (51), Expect = 7.9
 Identities = 3/30 (10%), Positives = 9/30 (30%), Gaps = 4/30 (13%)

Query: 74  LEKMGIKSKFENGLRITDQQTAEVVEMVLA 103
           L K     K       ++     ++ +  +
Sbjct: 48  LTKHSWIIKEGEKYCPSE----PLISLAFS 73


>d1e9yb2 c.1.9.2 (B:132-431,B:481-569) alpha-subunit of urease,
           catalytic domain {Helicobacter pylori [TaxId: 210]}
          Length = 389

 Score = 23.1 bits (50), Expect = 9.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 55  KSNITPVIVHGGGPQIGAV 73
           K  I P I HG    +G+V
Sbjct: 277 KYTINPAIAHGISEYVGSV 295


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.135    0.375 

Gapped
Lambda     K      H
   0.267   0.0689    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 536,518
Number of extensions: 23640
Number of successful extensions: 116
Number of sequences better than 10.0: 1
Number of HSP's gapped: 111
Number of HSP's successfully gapped: 49
Length of query: 150
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 72
Effective length of database: 1,336,656
Effective search space: 96239232
Effective search space used: 96239232
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (22.7 bits)