HHsearch alignment for GI: peg_394 and conserved domain: COG0549

>COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism].
Probab=99.78  E-value=1.6e-18  Score=123.00  Aligned_cols=131  Identities=25%  Similarity=0.428  Sum_probs=107.6

Q ss_pred             EEE-ECHHHHHHHHHCCCEEEEC-----CCCCCCCC---CEECCCHHHHHHHHHHHHCHHHHHHHCCCCCEEECCC----
Q ss_conf             135-5699999999779849985-----74317873---2006614799999998625113343226763353455----
Q 537021.9.peg.3    7 VIK-VNRTILDLLIKSGIIPVIA-----PIAPGYDG---ATYNINADTFAGAIAEKLNVIRLLFLTDVPGVLDKNR----   73 (142)
Q Consensus         7 v~~-vd~~~i~~lL~~g~iPVi~-----pig~~~~G---~~~nin~D~~a~~lA~~l~A~kli~ltdv~Gv~d~~~----   73 (142)
T Consensus       168 P~~IvE~~~Ik~L~~~g~vVI~~GGGGIPVv~~~~~~~GVeAVIDKDlasalLA~~i~AD~liILTdVd~Vy~n~gkp~q  247 (312)
T COG0549         168 PVRIVEAEAIKALLESGHVVIAAGGGGIPVVEEGAGLQGVEAVIDKDLASALLAEQIDADLLIILTDVDAVYVNFGKPNQ  247 (312)
T ss_pred             CCCCHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCEEEEEECCHHHHHHHHHHHCCCEEEEEECCCHHEECCCCCCC
T ss_conf             71203178899998679889995788744486189731036898118778999987158989998546511112799551


Q ss_pred             CCCCCCCHHHHHHHHHCCCCCCC-HHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCEECC
Q ss_conf             55563388899999626976786-7899999999998499889995257876899999679986634549
Q 537021.9.peg.3   74 QLISKLSINEARTLIKDGTISGG-MIPKIETSIKAIENGVKSVAILDGKKPHSILMEIFTKNGSGTLLIP  142 (142)
Q Consensus        74 ~~i~~i~~~e~~~l~~~~~~~~g-m~~Ki~~a~~a~~~Gv~~v~i~~~~~~~~ll~elft~~g~GT~i~p  142 (142)
T Consensus       248 ~~L~~v~~~e~~~yl~eg~Fa~GSM~PKVeAai~FV~~~gk~A~ItsL---e~~-~~~l-~g~~GT~I~~  312 (312)
T COG0549         248 QALDRVTVDEMEKYLAEGQFAAGSMGPKVEAAISFVENTGKPAIITSL---ENA-EAAL-EGKAGTVIVP  312 (312)
T ss_pred             HHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCH---HHH-HHHH-CCCCCCEECC
T ss_conf             122246999999998647988887318899999999847983697759---888-9986-4678858519