HHsearch alignment for GI: peg_394 and conserved domain: PRK06291

Probab=99.07  E-value=1.4e-09  Score=73.65  Aligned_cols=112  Identities=30%  Similarity=0.414  Sum_probs=84.2

Q ss_pred             HHHHHHCCCEEEECCC-CCCCCCCEECC---CHHHHHHHHHHHHCHHHHHHHCCCCCEEECCCC------CCCCCCHHHH
Q ss_conf             9999977984998574-31787320066---147999999986251133432267633534555------5563388899
Q 537021.9.peg.3   15 LDLLIKSGIIPVIAPI-APGYDGATYNI---NADTFAGAIAEKLNVIRLLFLTDVPGVLDKNRQ------LISKLSINEA   84 (142)
Q Consensus        15 i~~lL~~g~iPVi~pi-g~~~~G~~~ni---n~D~~a~~lA~~l~A~kli~ltdv~Gv~d~~~~------~i~~i~~~e~   84 (142)
T Consensus       181 ~~~~~~~~~v~vv~GFig~~~~G~~ttLGRGGSD~TAa~lA~~l~A~~~~IwTDV~Gi~taDPriV~~A~~i~~lsy~EA  260 (466)
T PRK06291        181 LGPLLKEGVIPVVTGFIGETEEGIITTLGRGGSDYSAAIIGAALDADEIWIWTDVDGVMTADPRIVPEARTIPKISYIEA  260 (466)
T ss_pred             HHHHHCCCCEEEECCCCEECCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCCCEECCCCCHHHH
T ss_conf             87774048368973610488999778707996189999999957886999940567347169987877754374599999


Q ss_pred             HHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCEEC
Q ss_conf             999626976786789999999999849988999525787689999967998663454
Q 537021.9.peg.3   85 RTLIKDGTISGGMIPKIETSIKAIENGVKSVAILDGKKPHSILMEIFTKNGSGTLLI  141 (142)
Q Consensus        85 ~~l~~~~~~~~gm~~Ki~~a~~a~~~Gv~~v~i~~~~~~~~ll~elft~~g~GT~i~  141 (142)
T Consensus       261 ~ELa~~Gak--VlHp--~ti~p~~~~~IP-i~I~nt~~P----------~~~GT~I~  302 (466)
T PRK06291        261 MELSYFGAK--VLHP--RTIEPAMEKGIP-VRVKNTFNP----------EFPGTLIT  302 (466)
T ss_pred             HHHHHCCCC--CCCH--HHHHHHHHCCCC-EEEEECCCC----------CCCCEEEE
T ss_conf             999975876--4567--789999980993-899826898----------99972896