HHsearch alignment for GI: peg_394 and conserved domain: TIGR02078
>TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative; InterPro: IPR011819 This family consists of proteins restricted to and found as paralogous pairs (typically close together) in species of Pyrococcus, a hyperthermophilic archaeal genus. Members are always found close to other genes of threonine biosynthesis and appear to represent the Pyrococcal form of aspartate kinase. Alignment to aspartokinase III from Escherichia coli shows that 300 N-terminal and 20 C-terminal amino acids are homologous, but the form in Pyrococcus lacks ~100 amino acids in between..
Probab=98.12 E-value=1.2e-05 Score=51.93 Aligned_cols=106 Identities=25% Similarity=0.325 Sum_probs=74.7
Q ss_pred CHHHHHHHHHCCCEEEECCCCCCCCCCEECC---CHHHHHHHHHHHHCHHHHHHHCCCCCEEECCCCC------CCCCCH
Q ss_conf 6999999997798499857431787320066---1479999999862511334322676335345555------563388
Q 537021.9.peg.3 11 NRTILDLLIKSGIIPVIAPIAPGYDGATYNI---NADTFAGAIAEKLNVIRLLFLTDVPGVLDKNRQL------ISKLSI 81 (142)
Q Consensus 11 d~~~i~~lL~~g~iPVi~pig~~~~G~~~ni---n~D~~a~~lA~~l~A~kli~ltdv~Gv~d~~~~~------i~~i~~ 81 (142)
T Consensus 153 ~~k~~~~~l~~G~iPvipGF~gnlnGyrvTlGRGGSDYSAvalg~l~~s~~v~IMSdVEGIfTADPKLvPsArLIpY~SY 232 (341)
T TIGR02078 153 NAKILYEVLESGKIPVIPGFYGNLNGYRVTLGRGGSDYSAVALGVLLNSKLVAIMSDVEGIFTADPKLVPSARLIPYLSY 232 (341)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCEEEECCCCCCCCHHCCCCCCH
T ss_conf 77788988865830221462068884489864786227999999875122689973456004358663750010333347
Q ss_pred HHHHHHHHCCCCCCCHH-HHHHHHHHHHHCCCCEEEEEECCCCC
Q ss_conf 89999962697678678-99999999998499889995257876
Q 537021.9.peg.3 82 NEARTLIKDGTISGGMI-PKIETSIKAIENGVKSVAILDGKKPH 124 (142)
Q Consensus 82 ~e~~~l~~~~~~~~gm~-~Ki~~a~~a~~~Gv~~v~i~~~~~~~ 124 (142)
T Consensus 233 ~Ei~i--A---aK~GMkAl~wk-A~~l~~e--~~ip~lfGrt~d 268 (341)
T TIGR02078 233 EEILI--A---AKLGMKALQWK-AADLAKE--YKIPVLFGRTRD 268 (341)
T ss_pred HHHHH--H---HHHHHHHHHHH-HCCCCCC--CEEEEEECCCCC
T ss_conf 79999--7---45205777665-2000157--543587415466