HHsearch alignment for GI: peg_394 and conserved domain: cd04258
>cd04258 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII. AKIII is a monofunctional class enzyme (LysC) found in some bacteria such as E. coli. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In E. coli, LysC is reported to be a homodimer of 50 kD subunits.
Probab=98.94 E-value=7.4e-09 Score=69.56 Aligned_cols=108 Identities=25% Similarity=0.333 Sum_probs=81.2
Q ss_pred HHHCCCEEEECCC-CCCCCCCEECC---CHHHHHHHHHHHHCHHHHHHHCCCCCEEECCCC------CCCCCCHHHHHHH
Q ss_conf 9977984998574-31787320066---147999999986251133432267633534555------5563388899999
Q 537021.9.peg.3 18 LIKSGIIPVIAPI-APGYDGATYNI---NADTFAGAIAEKLNVIRLLFLTDVPGVLDKNRQ------LISKLSINEARTL 87 (142)
Q Consensus 18 lL~~g~iPVi~pi-g~~~~G~~~ni---n~D~~a~~lA~~l~A~kli~ltdv~Gv~d~~~~------~i~~i~~~e~~~l 87 (142)
T Consensus 174 ~~~~~~i~Vv~GFig~~~~G~~ttLGRGGSDyTA~~la~~l~A~~v~iwtDV~Gi~taDPr~V~~A~~i~~lsy~EA~eL 253 (292)
T cd04258 174 PLLAGTVVVTQGFIGSTEKGRTTTLGRGGSDYSAALLAEALHAEELQIWTDVAGIYTTDPRICPAARAIKEISFAEAAEM 253 (292)
T ss_pred HHCCCCEEEECCCCEECCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCHHHHHHH
T ss_conf 53379899935805437999777537896168999999976998899996788787589987898767483699999999
Q ss_pred HHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCEE
Q ss_conf 62697678678999999999984998899952578768999996799866345
Q 537021.9.peg.3 88 IKDGTISGGMIPKIETSIKAIENGVKSVAILDGKKPHSILMEIFTKNGSGTLL 140 (142)
Q Consensus 88 ~~~~~~~~gm~~Ki~~a~~a~~~Gv~~v~i~~~~~~~~ll~elft~~g~GT~i 140 (142)
T Consensus 254 a~~Gak--VlHp--~ti~p~~~~~Ip-i~I~nt----------~~p~~~GT~I 291 (292)
T cd04258 254 ATFGAK--VLHP--ATLLPAIRKNIP-VFVGSS----------KDPEAGGTLI 291 (292)
T ss_pred HHCCCC--CCCH--HHHHHHHHCCCC-EEEECC----------CCCCCCCEEE
T ss_conf 977973--1699--999999986994-899378----------9989998254