HHsearch results for GI: peg_394 and protein with PDBid: 2ap9_A

>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis CDC1551} SCOP: c.73.1.2
Probab=100.00  E-value=3e-39  Score=236.18  Aligned_cols=140  Identities=39%  Similarity=0.674  Sum_probs=131.9

Q ss_pred             CCCCCCEEEECHHHHHHHHHCCCEEEECCCCCCCCCCEECCCHHHHHHHHHHHHCHHHHHHHCCCCCEEECC---CCCCC
Q ss_conf             985520135569999999977984998574317873200661479999999862511334322676335345---55556
Q 537021.9.peg.3    1 LGFVGNVIKVNRTILDLLIKSGIIPVIAPIAPGYDGATYNINADTFAGAIAEKLNVIRLLFLTDVPGVLDKN---RQLIS   77 (142)
Q Consensus         1 ~g~~G~v~~vd~~~i~~lL~~g~iPVi~pig~~~~G~~~nin~D~~a~~lA~~l~A~kli~ltdv~Gv~d~~---~~~i~   77 (142)
                      ++|+|++++++.+.|+.+|++|.+||++|++++.+|+.+|+|+|.+|+.+|.+++|+||||+||++|+|+++   ++.++
T Consensus       148 ~~~~g~v~~v~~~~I~~ll~~g~ipvi~~~~~~~~g~~~~id~D~lAa~lA~~l~AdkLI~Ltdv~Gl~~~~~~~~~~i~  227 (299)
T 2ap9_A          148 IGLVGDVDQVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVS  227 (299)
T ss_dssp             CBSEEEEEEECHHHHHHHHHTTCEEEEESEEECTTCCEEEECHHHHHHHHHHHTTCSEEEEEESSSSEETTTTCTTCEES
T ss_pred             CCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC
T ss_conf             54025301148899999982899403467654887865356489999999997389789986157862246543321012


Q ss_pred             CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCEECC
Q ss_conf             33888999996269767867899999999998499889995257876899999679986634549
Q 537021.9.peg.3   78 KLSINEARTLIKDGTISGGMIPKIETSIKAIENGVKSVAILDGKKPHSILMEIFTKNGSGTLLIP  142 (142)
Q Consensus        78 ~i~~~e~~~l~~~~~~~~gm~~Ki~~a~~a~~~Gv~~v~i~~~~~~~~ll~elft~~g~GT~i~p  142 (142)
                      +++..+++++++.  ++|||.+|+++|.+|+++||+||||+||+.|++|+.||||++|+||+|.+
T Consensus       228 ~~~~~~~~~~~~~--~~GGM~~Kl~aA~~A~~~GV~~v~Ii~g~~~~~ll~eLft~~g~GT~I~~  290 (299)
T 2ap9_A          228 EIDTGTLAQLLPT--LELGMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVR  290 (299)
T ss_dssp             EEEHHHHHHHGGG--SCTTTHHHHHHHHHHHHHTCSEEEEEETTSTTHHHHHHHSCCCCSEEEEC
T ss_pred             CCCHHHHHHHHHH--HHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCCCEEEC
T ss_conf             2899999988644--00837999999999998799989996899988799998069997406975