HHsearch results for GI: peg_394 and protein with PDBid: 2ap9_A
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis CDC1551} SCOP: c.73.1.2
Probab=100.00 E-value=3e-39 Score=236.18 Aligned_cols=140 Identities=39% Similarity=0.674 Sum_probs=131.9
Q ss_pred CCCCCCEEEECHHHHHHHHHCCCEEEECCCCCCCCCCEECCCHHHHHHHHHHHHCHHHHHHHCCCCCEEECC---CCCCC
Q ss_conf 985520135569999999977984998574317873200661479999999862511334322676335345---55556
Q 537021.9.peg.3 1 LGFVGNVIKVNRTILDLLIKSGIIPVIAPIAPGYDGATYNINADTFAGAIAEKLNVIRLLFLTDVPGVLDKN---RQLIS 77 (142)
Q Consensus 1 ~g~~G~v~~vd~~~i~~lL~~g~iPVi~pig~~~~G~~~nin~D~~a~~lA~~l~A~kli~ltdv~Gv~d~~---~~~i~ 77 (142)
++|+|++++++.+.|+.+|++|.+||++|++++.+|+.+|+|+|.+|+.+|.+++|+||||+||++|+|+++ ++.++
T Consensus 148 ~~~~g~v~~v~~~~I~~ll~~g~ipvi~~~~~~~~g~~~~id~D~lAa~lA~~l~AdkLI~Ltdv~Gl~~~~~~~~~~i~ 227 (299)
T 2ap9_A 148 IGLVGDVDQVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVS 227 (299)
T ss_dssp CBSEEEEEEECHHHHHHHHHTTCEEEEESEEECTTCCEEEECHHHHHHHHHHHTTCSEEEEEESSSSEETTTTCTTCEES
T ss_pred CCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 54025301148899999982899403467654887865356489999999997389789986157862246543321012
Q ss_pred CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCEECC
Q ss_conf 33888999996269767867899999999998499889995257876899999679986634549
Q 537021.9.peg.3 78 KLSINEARTLIKDGTISGGMIPKIETSIKAIENGVKSVAILDGKKPHSILMEIFTKNGSGTLLIP 142 (142)
Q Consensus 78 ~i~~~e~~~l~~~~~~~~gm~~Ki~~a~~a~~~Gv~~v~i~~~~~~~~ll~elft~~g~GT~i~p 142 (142)
+++..+++++++. ++|||.+|+++|.+|+++||+||||+||+.|++|+.||||++|+||+|.+
T Consensus 228 ~~~~~~~~~~~~~--~~GGM~~Kl~aA~~A~~~GV~~v~Ii~g~~~~~ll~eLft~~g~GT~I~~ 290 (299)
T 2ap9_A 228 EIDTGTLAQLLPT--LELGMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVR 290 (299)
T ss_dssp EEEHHHHHHHGGG--SCTTTHHHHHHHHHHHHHTCSEEEEEETTSTTHHHHHHHSCCCCSEEEEC
T ss_pred CCCHHHHHHHHHH--HHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCCCEEEC
T ss_conf 2899999988644--00837999999999998799989996899988799998069997406975