HHsearch results for GI: peg_394 and protein with PDBid: 2v5h_A

>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transferase, cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=100.00  E-value=7.5e-43  Score=256.04  Aligned_cols=142  Identities=44%  Similarity=0.854  Sum_probs=137.3

Q ss_pred             CCCCCCEEEECHHHHHHHHHCCCEEEECCCCCCCCCCEECCCHHHHHHHHHHHHCHHHHHHHCCCCCEEECCC---CCCC
Q ss_conf             9855201355699999999779849985743178732006614799999998625113343226763353455---5556
Q 537021.9.peg.3    1 LGFVGNVIKVNRTILDLLIKSGIIPVIAPIAPGYDGATYNINADTFAGAIAEKLNVIRLLFLTDVPGVLDKNR---QLIS   77 (142)
Q Consensus         1 ~g~~G~v~~vd~~~i~~lL~~g~iPVi~pig~~~~G~~~nin~D~~a~~lA~~l~A~kli~ltdv~Gv~d~~~---~~i~   77 (142)
                      +||+|+++++|.+.++.++++|++||++|++++++|+.+|+|+|++|+++|.+|+|+||||+||++|+|+.++   .+++
T Consensus       166 ~~~~g~v~~v~~~~i~~~l~~g~ipvis~i~~~~~G~~~nid~D~lAa~lA~~L~AdkLI~Ltdv~Gv~~~~~~~~~~i~  245 (321)
T 2v5h_A          166 IGFVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGILEDPKRPESLIP  245 (321)
T ss_dssp             SBSBEEEEEECGGGTHHHHHTTCEEEEESEEECTTSCEEECCHHHHHHHHHHHTTCSEEEEEESSSSCBSSTTCTTCBCC
T ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHCCC
T ss_conf             35434421034799999971798312167537888977346799999999997184615774257552235433100145


Q ss_pred             CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCEECC
Q ss_conf             33888999996269767867899999999998499889995257876899999679986634549
Q 537021.9.peg.3   78 KLSINEARTLIKDGTISGGMIPKIETSIKAIENGVKSVAILDGKKPHSILMEIFTKNGSGTLLIP  142 (142)
Q Consensus        78 ~i~~~e~~~l~~~~~~~~gm~~Ki~~a~~a~~~Gv~~v~i~~~~~~~~ll~elft~~g~GT~i~p  142 (142)
                      +++..|++++++++.++|||++|+++|.+|+++|+++|||+||+.|++|+.||||++|+||+|+|
T Consensus       246 ~l~~~e~~~li~~g~itGGM~~Kv~aA~~a~~~GV~~v~Ii~G~~~~~lL~elft~~giGT~I~~  310 (321)
T 2v5h_A          246 RLNIPQSRELIAQGIVGGGMIPKVDCCIRSLAQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVG  310 (321)
T ss_dssp             EEEHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHCCCCSEEEEEC
T ss_pred             CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCEEEC
T ss_conf             48999999999779877748999999999998799989996488988799998069997307989