HHSEARCH alignment of GI: peg_394 and SCOP domain: d2akoa1

Alignment

Probab=99.86  E-value=7.3e-22  Score=138.87  Aligned_cols=132  Identities=20%  Similarity=0.270  Sum_probs=108.7

Q ss_pred             EECHHHHHHHHHCCCEEEECCCCCCCCCCEECCCHHHHHHHHHHHHCHHHHHHHCCCCCEEECC------CCCCCCCCH-
Q ss_conf             5569999999977984998574317873200661479999999862511334322676335345------555563388-
Q 537021.9.peg.3    9 KVNRTILDLLIKSGIIPVIAPIAPGYDGATYNINADTFAGAIAEKLNVIRLLFLTDVPGVLDKN------RQLISKLSI-   81 (142)
Q Consensus         9 ~vd~~~i~~lL~~g~iPVi~pig~~~~G~~~nin~D~~a~~lA~~l~A~kli~ltdv~Gv~d~~------~~~i~~i~~-   81 (142)
                      ....+.+..+++++.+|++.+......++.++.++|.+|+.+|..++|++++++||||||||.+      .++|++++. 
T Consensus       107 ~~~~~~~~~~l~~~~ipv~~~~~~~~~~~~~~~~~D~~A~~lA~~~~a~~li~~tdVdGVyd~dP~~~~~Ak~i~~It~~  186 (250)
T d2akoa1         107 KHAKNAIDMMINLGILPIINENDATAIEEIVFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKRLEKITHI  186 (250)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECTTTCCHHHHBTTTHHHHHHHHHHTTCSEEEEEESSCSCBSSCTTTCTTCCBCCEESCC
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCCCCCHHHCCCC
T ss_conf             56667789998708643235676634356435662146899988635430122068784466788656554202220256


Q ss_pred             -HHHHHHHH---CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCC-CCCCEEC
Q ss_conf             -89999962---697678678999999999984998899952578768999996799-8663454
Q 537021.9.peg.3   82 -NEARTLIK---DGTISGGMIPKIETSIKAIENGVKSVAILDGKKPHSILMEIFTKN-GSGTLLI  141 (142)
Q Consensus        82 -~e~~~l~~---~~~~~~gm~~Ki~~a~~a~~~Gv~~v~i~~~~~~~~ll~elft~~-g~GT~i~  141 (142)
                       ++..++..   +...+|||.+|+++|..+.++|++ ++|+||+.|+.|...+..++ ..||+|-
T Consensus       187 ~~~~~~~~~~~~s~~~tGGM~~Kl~aa~~~~~~gi~-v~I~nG~~~~~l~~~l~~~~~~~GTv~~  250 (250)
T d2akoa1         187 KEEWLQATIKTGSEHGTGGIVTKLKAAKFLLEHNKK-MFLASGFDLSVAKTFLLEDKQIGGTLFE  250 (250)
T ss_dssp             CGGGC---------CBSCHHHHHHHHHHHHHHTTCE-EEEEESSSCHHHHHHHHSCCCCSSEEEC
T ss_pred             CHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC-EEEECCCCCCHHHHHHHCCCCCCCEEEC
T ss_conf             667764302567788878517899999999987997-9996499963799998579978805859

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Carbamate kinase-like
superfamily: Carbamate kinase-like
family: PyrH-like
domain: Glutamate 5-kinase
species: Campylobacter jejuni [TaxId: 197]