HHSEARCH alignment of GI: peg_394 and SCOP domain: d2hmfa1

Alignment

Probab=99.10  E-value=1.5e-10  Score=76.36  Aligned_cols=120  Identities=29%  Similarity=0.361  Sum_probs=90.9

Q ss_pred             EEECH-HHHHHHHHCCCEEEECCC-CCCCCCCEECC---CHHHHHHHHHHHHCHHHHHHHCCCCCEEECCCC------CC
Q ss_conf             35569-999999977984998574-31787320066---147999999986251133432267633534555------55
Q 537021.9.peg.3    8 IKVNR-TILDLLIKSGIIPVIAPI-APGYDGATYNI---NADTFAGAIAEKLNVIRLLFLTDVPGVLDKNRQ------LI   76 (142)
Q Consensus         8 ~~vd~-~~i~~lL~~g~iPVi~pi-g~~~~G~~~ni---n~D~~a~~lA~~l~A~kli~ltdv~Gv~d~~~~------~i   76 (142)
                      ..... +.+..+++.+.+||++-+ |.+.+|++..+   -+|..|+.+|.+|+|+.+.+.|||+|+|..|++      ++
T Consensus       169 ~~~~~~~~l~~~~~~~~v~Vv~GFig~~~~G~~ttLgRgGSD~tA~~la~~l~A~~~~i~tdv~gi~~~dP~~~~~a~~~  248 (302)
T d2hmfa1         169 KRLEVKERLLPLLKEGIIPVVTGFIGTTEEGYITTLGRGGSDYSAALIGYGLDADIIEIWTDVSGVYTTDPRLVPTARRI  248 (302)
T ss_dssp             EEECHHHHHHHHHHTTCEEEEESSEEECTTCCEEECCTTTHHHHHHHHHHHHTCSEEEEEESSSSCBSSCTTTCTTCCBC
T ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHCCCHHCCCHHHCCCCCEEE
T ss_conf             56656888888986498488604555079998788750676408999999845189999841312012611228876572


Q ss_pred             CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCEECC
Q ss_conf             633888999996269767867899999999998499889995257876899999679986634549
Q 537021.9.peg.3   77 SKLSINEARTLIKDGTISGGMIPKIETSIKAIENGVKSVAILDGKKPHSILMEIFTKNGSGTLLIP  142 (142)
Q Consensus        77 ~~i~~~e~~~l~~~~~~~~gm~~Ki~~a~~a~~~Gv~~v~i~~~~~~~~ll~elft~~g~GT~i~p  142 (142)
                      ++++.+|+.+|...+.-  -|-|  ++..-+.++++| ++|.|.          |+.+..||+|.+
T Consensus       249 ~~~~y~ea~eLa~~g~~--v~h~--~~~~~~~~~~i~-i~v~~~----------~~~~~~gT~i~~  299 (302)
T d2hmfa1         249 PKLSYIEAMELAYFGAK--VLHP--RTIEPAMEKGIP-ILVKNT----------FEPESEGTLITN  299 (302)
T ss_dssp             SEEEHHHHHHHHHTTCT--TSCG--GGHHHHHHTTCC-EEEEET----------TSTTSCCEEEES
T ss_pred             CCCCHHHHHHHHHCCCC--CCCH--HHHHHHHHCCCC-EEEEEC----------CCCCCCCCEECC
T ss_conf             63089999999858971--1589--999999986997-899608----------999999987728

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Carbamate kinase-like
superfamily: Carbamate kinase-like
family: PyrH-like
domain: Aspartokinase
species: Methanococcus jannaschii [TaxId: 2190]