HHSEARCH alignment of GI: peg_394 and SCOP domain: d2j0wa1

Alignment
>d2j0wa1 c.73.1.3 (A:3-294) Aspartokinase {Escherichia coli [TaxId: 562]}
Probab=98.96  E-value=1.3e-09  Score=71.24  Aligned_cols=110  Identities=25%  Similarity=0.356  Sum_probs=81.2

Q ss_pred             HHHHHHCCCEEEEC-CCCCCCCCCEECC---CHHHHHHHHHHHHCHHHHHHHCCCCCEEECCCC------CCCCCCHHHH
Q ss_conf             99999779849985-7431787320066---147999999986251133432267633534555------5563388899
Q 537021.9.peg.3   15 LDLLIKSGIIPVIA-PIAPGYDGATYNI---NADTFAGAIAEKLNVIRLLFLTDVPGVLDKNRQ------LISKLSINEA   84 (142)
Q Consensus        15 i~~lL~~g~iPVi~-pig~~~~G~~~ni---n~D~~a~~lA~~l~A~kli~ltdv~Gv~d~~~~------~i~~i~~~e~   84 (142)
                      +...++.+ +||++ =+|.+.+|++..+   -+|..|+.+|..|+|+.+.+.|||+|+|..|++      +|++++.+|+
T Consensus       168 ~~~~~~~~-i~Vv~GFig~~~~G~~ttLGRgGSDytAa~~a~~l~A~~v~iwtDV~Gi~taDP~~v~~A~~i~~lsy~EA  246 (292)
T d2j0wa1         168 LLPRLNEG-LVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAEA  246 (292)
T ss_dssp             THHHHHHS-EEEEESSEEECTTSCEEECCTTHHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEEEHHHH
T ss_pred             HHHHHCCC-CCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHCCCCCEEECHHHCCCCCEECCEECHHHH
T ss_conf             56663234-30004442004689667614676527999999985058999861675234363232778647265289999


Q ss_pred             HHHHHCCC--CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCEECC
Q ss_conf             99962697--67867899999999998499889995257876899999679986634549
Q 537021.9.peg.3   85 RTLIKDGT--ISGGMIPKIETSIKAIENGVKSVAILDGKKPHSILMEIFTKNGSGTLLIP  142 (142)
Q Consensus        85 ~~l~~~~~--~~~gm~~Ki~~a~~a~~~Gv~~v~i~~~~~~~~ll~elft~~g~GT~i~p  142 (142)
                      .+|..-|.  +-.      ++..-+.++++| ++|-|-..          .+..||+|.+
T Consensus       247 ~ela~~GakVlhp------~ti~p~~~~~Ip-i~i~nt~~----------p~~~GT~I~~  289 (292)
T d2j0wa1         247 AEMATFGAKVLHP------ATLLPAVRSDIP-VFVGSSKD----------PRAGGTLVCN  289 (292)
T ss_dssp             HHHHHTTCTTSCT------TTHHHHHHHTCC-EEEEESSC----------TTSCCEEEES
T ss_pred             HHHHHCCCCCCCH------HHHHHHHHCCCC-EEEEECCC----------CCCCCCEEEC
T ss_conf             9999689630599------999999986995-89961799----------8999876831


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Carbamate kinase-like
superfamily: Carbamate kinase-like
family: PyrH-like
domain: Aspartokinase
species: Escherichia coli [TaxId: 562]