HHsearch alignment for GI: peg_409 and conserved domain: CHL00176

Probab=95.16  E-value=0.036  Score=35.04  Aligned_cols=75  Identities=11%  Similarity=0.115  Sum_probs=45.3

Q ss_pred             HHHHHHCCCHHH---HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             973235094899---99827688879984888996799999999998247898895667768789999999999996775
Q 537021.9.peg.4   13 TIDLISQTKSEQ---LLASDPTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVLEIITAW   89 (242)
Q Consensus        13 ~~~~~~~~~~qq---~~a~~~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~~~l~~~   89 (242)
T Consensus       189 l~EivdfLk~P~k~~~~Gak~PkGvLL~GpPGTGKTlL-AkAvAg--Ea~vpF~~~sgs~F~e~~vGvga~rVR~LF~~A  265 (631)
T CHL00176        189 LEEVVTFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLL-AKAIAG--EAEVPFFSISGSEFVEMFVGVGAARVRDLFKKA  265 (631)
T ss_pred             HHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCCHHHH-HHHHHC--CCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             99999983595887644996896589889899878899-999856--558846998837855642155589999999999


Q ss_pred             H
Q ss_conf             2
Q 537021.9.peg.4   90 S   90 (242)
Q Consensus        90 ~   90 (242)
T Consensus       266 r  266 (631)
T CHL00176        266 K  266 (631)
T ss_pred             H
T ss_conf             8