HHsearch alignment for GI: peg_409 and conserved domain: COG0630
>COG0630 VirB11 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=90.73 E-value=0.29 Score=28.60 Aligned_cols=30 Identities=30% Similarity=0.488 Sum_probs=22.9
Q ss_pred HHHCCCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 9827688879984888996799999999998
Q 537021.9.peg.4 26 LASDPTRSAWVSANAGSGKTHILVQRVLRLL 56 (242)
Q Consensus 26 ~a~~~~~~~lV~A~aGSGKT~tL~~rv~~ll 56 (242)
T Consensus 138 ~~ie~~~siii~G~t~sGKTt~lna-ll~~I 167 (312)
T COG0630 138 LAIEARKSIIICGGTASGKTTLLNA-LLDFI 167 (312)
T ss_pred HHHHCCCCEEEECCCCCCHHHHHHH-HHHHC
T ss_conf 9997699499988888864959999-98637