HHsearch alignment for GI: peg_409 and conserved domain: COG1643

>COG1643 HrpA HrpA-like helicases [DNA replication, recombination, and repair].

Probab=95.43  E-value=0.02  Score=36.88  Aligned_cols=54  Identities=26%  Similarity=0.311  Sum_probs=33.5

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHHH--CC----CCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             6888799848889967999999999982--47----898895667768789999999999
Q 537021.9.peg.4   30 PTRSAWVSANAGSGKTHILVQRVLRLLL--AN----AHPSTLLCLTHTKAAAAEMSHRVL   83 (242)
Q Consensus        30 ~~~~~lV~A~aGSGKT~tL~~rv~~ll~--~g----~~P~~IL~lTFT~kAA~El~~RI~   83 (242)
T Consensus        64 ~~~vvii~getGsGKTTqlP~~lle~g~~~~g~I~~tQPRRlAArsvA~RvAeel~~~~G  123 (845)
T COG1643          64 QNQVVIIVGETGSGKTTQLPQFLLEEGLGIAGKIGCTQPRRLAARSVAERVAEELGEKLG  123 (845)
T ss_pred             HCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf             697899867998875878899999600166875996584389999999999998389867