HHsearch alignment for GI: peg_409 and conserved domain: COG2256

>COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair].
Probab=93.59  E-value=0.17  Score=30.34  Aligned_cols=55  Identities=18%  Similarity=0.116  Sum_probs=37.3

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             6888799848889967999999999982478988956677687899999999999967
Q 537021.9.peg.4   30 PTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVLEIIT   87 (242)
Q Consensus        30 ~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~~~l~   87 (242)
T Consensus        47 ~l~SmIl~GPPG~GKTTlA-~liA~--~~~~~f~~~sAv~~gvkdlr~i~e~a~~~~~  101 (436)
T COG2256          47 HLHSMILWGPPGTGKTTLA-RLIAG--TTNAAFEALSAVTSGVKDLREIIEEARKNRL  101 (436)
T ss_pred             CCCEEEEECCCCCCHHHHH-HHHHH--HHCCCEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf             9860577789998888999-99987--6177669951523467999999999999872