HHsearch alignment for GI: peg_409 and conserved domain: COG2804

>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion].

Probab=95.72  E-value=0.014  Score=37.80  Aligned_cols=34  Identities=29%  Similarity=0.312  Sum_probs=27.1

Q ss_pred             HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHC
Q ss_conf             9982768887998488899679999999999824
Q 537021.9.peg.4   25 LLASDPTRSAWVSANAGSGKTHILVQRVLRLLLA   58 (242)
Q Consensus        25 ~~a~~~~~~~lV~A~aGSGKT~tL~~rv~~ll~~   58 (242)
T Consensus       252 ~~~~~p~GliLvTGPTGSGKTTTLY~~L~~ln~~  285 (500)
T COG2804         252 RLLNRPQGLILVTGPTGSGKTTTLYAALSELNTP  285 (500)
T ss_pred             HHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf             9972897089996899998899999999986278