HHsearch alignment for GI: peg_409 and conserved domain: COG3973
>COG3973 Superfamily I DNA and RNA helicases [General function prediction only].
Probab=98.43 E-value=3.5e-06 Score=63.26 Aligned_cols=70 Identities=26% Similarity=0.318 Sum_probs=54.5
Q ss_pred HHHHHHHHCCCHHHHHHH--CCCCCEEEEECCCCCHHHHHHHHHHHHHH--CCC-CHHHHHHHHHHHHHHHHHHH
Q ss_conf 889732350948999982--76888799848889967999999999982--478-98895667768789999999
Q 537021.9.peg.4 11 SETIDLISQTKSEQLLAS--DPTRSAWVSANAGSGKTHILVQRVLRLLL--ANA-HPSTLLCLTHTKAAAAEMSH 80 (242)
Q Consensus 11 ~~~~~~~~~~~~qq~~a~--~~~~~~lV~A~aGSGKT~tL~~rv~~ll~--~g~-~P~~IL~lTFT~kAA~El~~ 80 (242)
T Consensus 204 ~~mrdIV~TIQkEQneIIR~ek~~ilVVQGaAGSGKTtiALHRvAyLlY~~R~~l~~k~vlvl~PN~vFleYis~ 278 (747)
T COG3973 204 AKMRDIVETIQKEQNEIIRFEKNKILVVQGAAGSGKTTIALHRVAYLLYGYRGPLQAKPVLVLGPNRVFLEYISR 278 (747)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHH
T ss_conf 127789998617677787555787489955888871358899999998535662466865998283899999987