HHsearch alignment for GI: peg_409 and conserved domain: COG3973

>COG3973 Superfamily I DNA and RNA helicases [General function prediction only].
Probab=98.43  E-value=3.5e-06  Score=63.26  Aligned_cols=70  Identities=26%  Similarity=0.318  Sum_probs=54.5

Q ss_pred             HHHHHHHHCCCHHHHHHH--CCCCCEEEEECCCCCHHHHHHHHHHHHHH--CCC-CHHHHHHHHHHHHHHHHHHH
Q ss_conf             889732350948999982--76888799848889967999999999982--478-98895667768789999999
Q 537021.9.peg.4   11 SETIDLISQTKSEQLLAS--DPTRSAWVSANAGSGKTHILVQRVLRLLL--ANA-HPSTLLCLTHTKAAAAEMSH   80 (242)
Q Consensus        11 ~~~~~~~~~~~~qq~~a~--~~~~~~lV~A~aGSGKT~tL~~rv~~ll~--~g~-~P~~IL~lTFT~kAA~El~~   80 (242)
T Consensus       204 ~~mrdIV~TIQkEQneIIR~ek~~ilVVQGaAGSGKTtiALHRvAyLlY~~R~~l~~k~vlvl~PN~vFleYis~  278 (747)
T COG3973         204 AKMRDIVETIQKEQNEIIRFEKNKILVVQGAAGSGKTTIALHRVAYLLYGYRGPLQAKPVLVLGPNRVFLEYISR  278 (747)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHH
T ss_conf             127789998617677787555787489955888871358899999998535662466865998283899999987