HHsearch alignment for GI: peg_409 and conserved domain: KOG0328

>KOG0328 consensus.
Probab=94.84  E-value=0.0021  Score=43.74  Aligned_cols=67  Identities=22%  Similarity=0.268  Sum_probs=50.3

Q ss_pred             HHCCCHHHHHHHC--CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             3509489999827--688879984888996799999999998247898895667768789999999999
Q 537021.9.peg.4   17 ISQTKSEQLLASD--PTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVL   83 (242)
Q Consensus        17 ~~~~~~qq~~a~~--~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~   83 (242)
T Consensus        48 ekPS~IQqrAi~~IlkGrdViaQaqSGTGKTa~~si~vlq~~d~~~r~tQ~lilsPTRELa~Qi~~vi~  116 (400)
T KOG0328          48 EKPSAIQQRAIPQILKGRDVIAQAQSGTGKTATFSISVLQSLDISVRETQALILSPTRELAVQIQKVIL  116 (400)
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHH
T ss_conf             781677761024563366147870478884478986631403434200357895470899999999999