HHsearch alignment for GI: peg_409 and conserved domain: KOG0328
>KOG0328 consensus.
Probab=94.84 E-value=0.0021 Score=43.74 Aligned_cols=67 Identities=22% Similarity=0.268 Sum_probs=50.3
Q ss_pred HHCCCHHHHHHHC--CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3509489999827--688879984888996799999999998247898895667768789999999999
Q 537021.9.peg.4 17 ISQTKSEQLLASD--PTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSHRVL 83 (242)
Q Consensus 17 ~~~~~~qq~~a~~--~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~RI~ 83 (242)
T Consensus 48 ekPS~IQqrAi~~IlkGrdViaQaqSGTGKTa~~si~vlq~~d~~~r~tQ~lilsPTRELa~Qi~~vi~ 116 (400)
T KOG0328 48 EKPSAIQQRAIPQILKGRDVIAQAQSGTGKTATFSISVLQSLDISVRETQALILSPTRELAVQIQKVIL 116 (400)
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHH
T ss_conf 781677761024563366147870478884478986631403434200357895470899999999999