HHsearch alignment for GI: peg_409 and conserved domain: KOG0338

>KOG0338 consensus.
Probab=95.56  E-value=0.017  Score=37.29  Aligned_cols=86  Identities=23%  Similarity=0.318  Sum_probs=55.2

Q ss_pred             CCHHHHHH---------HHHHHHHCCCHHHHHHH--CCCCCEEEEECCCCCHHHHHHHHHH-HHHH--CCCCHHHHHHHH
Q ss_conf             10078888---------89732350948999982--7688879984888996799999999-9982--478988956677
Q 537021.9.peg.4    4 HNSFQEHS---------ETIDLISQTKSEQLLAS--DPTRSAWVSANAGSGKTHILVQRVL-RLLL--ANAHPSTLLCLT   69 (242)
Q Consensus         4 ~~~~~~~~---------~~~~~~~~~~~qq~~a~--~~~~~~lV~A~aGSGKT~tL~~rv~-~ll~--~g~~P~~IL~lT   69 (242)
T Consensus       180 ~~sF~~mNLSRPlLka~~~lGy~~PTpIQ~a~IPvallgkDIca~A~TGsGKTAAF~lPiLERLlYrPk~~~~TRVLVL~  259 (691)
T KOG0338         180 NESFQSMNLSRPLLKACSTLGYKKPTPIQVATIPVALLGKDICACAATGSGKTAAFALPILERLLYRPKKVAATRVLVLV  259 (691)
T ss_pred             HHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHCCHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEE
T ss_conf             65488600246999988743878887403310127752222564011468711456788999985273567612699983


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             687899999999999967752167
Q 537021.9.peg.4   70 HTKAAAAEMSHRVLEIITAWSHLS   93 (242)
Q Consensus        70 FT~kAA~El~~RI~~~l~~~~~~~   93 (242)
T Consensus       260 PTR----ELaiQv~sV~~qlaqFt  279 (691)
T KOG0338         260 PTR----ELAIQVHSVTKQLAQFT  279 (691)
T ss_pred             CCH----HHHHHHHHHHHHHHHHC
T ss_conf             508----99999999999987660