HHsearch alignment for GI: peg_409 and conserved domain: KOG0340

>KOG0340 consensus.
Probab=90.15  E-value=0.41  Score=27.57  Aligned_cols=73  Identities=26%  Similarity=0.327  Sum_probs=49.2

Q ss_pred             HHHHHHHHHCCCHHHHHHHC--CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHH--HHHHHHHHHHHHHHHHHHHH
Q ss_conf             88897323509489999827--688879984888996799999999998247898895--66776878999999999999
Q 537021.9.peg.4   10 HSETIDLISQTKSEQLLASD--PTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTL--LCLTHTKAAAAEMSHRVLEI   85 (242)
Q Consensus        10 ~~~~~~~~~~~~~qq~~a~~--~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~I--L~lTFT~kAA~El~~RI~~~   85 (242)
T Consensus        21 ~l~~l~i~~pTpiQ~~cIpkILeGrdcig~AkTGsGKT~AFaLPil~rLse--dP~giFalvlTPTr----ELA~QiaEQ   94 (442)
T KOG0340          21 QLKALGIKKPTPIQQACIPKILEGRDCIGCAKTGSGKTAAFALPILNRLSE--DPYGIFALVLTPTR----ELALQIAEQ   94 (442)
T ss_pred             HHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC--CCCCCEEEEECCHH----HHHHHHHHH
T ss_conf             999835889982676524878546631031346887411222787776133--88760699954528----888888899


Q ss_pred             HHH
Q ss_conf             677
Q 537021.9.peg.4   86 ITA   88 (242)
Q Consensus        86 l~~   88 (242)
T Consensus        95 F~a   97 (442)
T KOG0340          95 FIA   97 (442)
T ss_pred             HHH
T ss_conf             998