HHsearch alignment for GI: peg_409 and conserved domain: KOG0744

Probab=93.25  E-value=0.071  Score=32.95  Aligned_cols=88  Identities=17%  Similarity=0.250  Sum_probs=44.6

Q ss_pred             CCCCCHHHHHHHHHHHHHCCCHHHHHHHC---CCCCEEEEECCCCCHHHHHHHHHHHHH--HCCCCH---------HHHH
Q ss_conf             97310078888897323509489999827---688879984888996799999999998--247898---------8956
Q 537021.9.peg.4    1 MIYHNSFQEHSETIDLISQTKSEQLLASD---PTRSAWVSANAGSGKTHILVQRVLRLL--LANAHP---------STLL   66 (242)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~qq~~a~~---~~~~~lV~A~aGSGKT~tL~~rv~~ll--~~g~~P---------~~IL   66 (242)
T Consensus       144 Liyds~lK~~ll~Ya~s~l~fsek~vntnlIt~NRliLlhGPPGTGKTSLCKaLaQkLSIR~~~~y~~~~liEinshsLF  223 (423)
T KOG0744         144 LIYDSNLKERLLSYAASALLFSEKKVNTNLITWNRLILLHGPPGTGKTSLCKALAQKLSIRTNDRYYKGQLIEINSHSLF  223 (423)
T ss_pred             HHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHEEEECCCCCCCEEEEEEHHHHH
T ss_conf             76413289999999999988876178874466414899857999882279999987514652376444069997046788


Q ss_pred             H--HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             6--776878999999999999677
Q 537021.9.peg.4   67 C--LTHTKAAAAEMSHRVLEIITA   88 (242)
Q Consensus        67 ~--lTFT~kAA~El~~RI~~~l~~   88 (242)
T Consensus       224 SKWFsESgKlV~kmF~kI~ELv~d  247 (423)
T KOG0744         224 SKWFSESGKLVAKMFQKIQELVED  247 (423)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             988712113899999999999717