HHsearch alignment for GI: peg_409 and conserved domain: PRK01172

Probab=95.62  E-value=0.036  Score=34.98  Aligned_cols=76  Identities=18%  Similarity=0.177  Sum_probs=53.3

Q ss_pred             CCHHHHHHHHHHHHHCCCHHHHHHH---CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             1007888889732350948999982---7688879984888996799999999998247898895667768789999999
Q 537021.9.peg.4    4 HNSFQEHSETIDLISQTKSEQLLAS---DPTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHTKAAAAEMSH   80 (242)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~qq~~a~---~~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT~kAA~El~~   80 (242)
T Consensus         9 ~~~~~~~~~~~g~-~l-~p~Q~ea~~~~~~gkNllvsaPTgsGKTlvAe~ai~~~l~~~---~k~iyi~P~kAL~~EK~~   83 (674)
T PRK01172          9 DDEFLNLFTGNDF-EL-YDHQRMAIEQLRKGENVIVSVPTAAGKTLIAYSAIYETFLAG---LKSIYIVPLRSLAMEKYE   83 (674)
T ss_pred             CHHHHHHHHHCCC-CC-CHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHC---CCEEEECCHHHHHHHHHH
T ss_conf             9799999996799-88-989999999997799599978999869999999999999858---979998778999999999


Q ss_pred             HHHH
Q ss_conf             9999
Q 537021.9.peg.4   81 RVLE   84 (242)
Q Consensus        81 RI~~   84 (242)
T Consensus        84 ~~~~   87 (674)
T PRK01172         84 ELSR   87 (674)
T ss_pred             HHHH
T ss_conf             9998