HHsearch alignment for GI: peg_409 and conserved domain: PRK04837
>PRK04837 ATP-dependent RNA helicase RhlB; Provisional.
Probab=95.84 E-value=0.019 Score=36.91 Aligned_cols=71 Identities=18% Similarity=0.167 Sum_probs=43.2
Q ss_pred HHHCCCHHHHHHH--CCCCCEEEEECCCCCHHHHHHHHHH-HHHHCCCCH------HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2350948999982--7688879984888996799999999-998247898------895667768789999999999996
Q 537021.9.peg.4 16 LISQTKSEQLLAS--DPTRSAWVSANAGSGKTHILVQRVL-RLLLANAHP------STLLCLTHTKAAAAEMSHRVLEII 86 (242)
Q Consensus 16 ~~~~~~~qq~~a~--~~~~~~lV~A~aGSGKT~tL~~rv~-~ll~~g~~P------~~IL~lTFT~kAA~El~~RI~~~l 86 (242)
T Consensus 29 ~~~pTpIQ~~aIP~il~G~Dvi~~A~TGSGKTlAfllPil~~ll~~~~~~~~~~~~p~aLIL~PTRE----La~Qi~~~~ 104 (423)
T PRK04837 29 FEYCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTATFHHLLSHPAPEGRKVNQPRALIMAPTRE----LAVQIHADA 104 (423)
T ss_pred CCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHH----HHHHHHHHH
T ss_conf 9999999999999996799889989998749999999999999837453345567861899938899----999999999
Q ss_pred HHHH
Q ss_conf 7752
Q 537021.9.peg.4 87 TAWS 90 (242)
Q Consensus 87 ~~~~ 90 (242)
T Consensus 105 ~~l~ 108 (423)
T PRK04837 105 EPLA 108 (423)
T ss_pred HHHH
T ss_conf 9974