HHsearch alignment for GI: peg_409 and conserved domain: PRK04837

>PRK04837 ATP-dependent RNA helicase RhlB; Provisional.
Probab=95.84  E-value=0.019  Score=36.91  Aligned_cols=71  Identities=18%  Similarity=0.167  Sum_probs=43.2

Q ss_pred             HHHCCCHHHHHHH--CCCCCEEEEECCCCCHHHHHHHHHH-HHHHCCCCH------HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             2350948999982--7688879984888996799999999-998247898------895667768789999999999996
Q 537021.9.peg.4   16 LISQTKSEQLLAS--DPTRSAWVSANAGSGKTHILVQRVL-RLLLANAHP------STLLCLTHTKAAAAEMSHRVLEII   86 (242)
Q Consensus        16 ~~~~~~~qq~~a~--~~~~~~lV~A~aGSGKT~tL~~rv~-~ll~~g~~P------~~IL~lTFT~kAA~El~~RI~~~l   86 (242)
T Consensus        29 ~~~pTpIQ~~aIP~il~G~Dvi~~A~TGSGKTlAfllPil~~ll~~~~~~~~~~~~p~aLIL~PTRE----La~Qi~~~~  104 (423)
T PRK04837         29 FEYCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTATFHHLLSHPAPEGRKVNQPRALIMAPTRE----LAVQIHADA  104 (423)
T ss_pred             CCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHH----HHHHHHHHH
T ss_conf             9999999999999996799889989998749999999999999837453345567861899938899----999999999


Q ss_pred             HHHH
Q ss_conf             7752
Q 537021.9.peg.4   87 TAWS   90 (242)
Q Consensus        87 ~~~~   90 (242)
T Consensus       105 ~~l~  108 (423)
T PRK04837        105 EPLA  108 (423)
T ss_pred             HHHH
T ss_conf             9974