HHsearch alignment for GI: peg_409 and conserved domain: PRK06526
>PRK06526 transposase; Provisional.
Probab=95.04 E-value=0.036 Score=35.05 Aligned_cols=39 Identities=23% Similarity=0.266 Sum_probs=30.4
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 688879984888996799999999998247898895667768
Q 537021.9.peg.4 30 PTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTHT 71 (242)
Q Consensus 30 ~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTFT 71 (242)
T Consensus 97 ~~~Nvil~G~~GtGKThLA~Alg~~A~~~G~---~v~f~~~~ 135 (254)
T PRK06526 97 GKENVVFLGPPGTGKTHLAIGLGIRACQAGH---RVLFATAA 135 (254)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHCCC---CEEEEEHH
T ss_conf 5887899899998689999999999998699---67998779