HHsearch alignment for GI: peg_409 and conserved domain: PRK06995
>PRK06995 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=93.17 E-value=0.097 Score=31.99 Aligned_cols=34 Identities=26% Similarity=0.264 Sum_probs=24.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHH-CCCCHHHHHHHH
Q ss_conf 799848889967999999999982-478988956677
Q 537021.9.peg.4 34 AWVSANAGSGKTHILVQRVLRLLL-ANAHPSTLLCLT 69 (242)
Q Consensus 34 ~lV~A~aGSGKT~tL~~rv~~ll~-~g~~P~~IL~lT 69 (242)
T Consensus 179 ~alVGPTGVGKTTTiAKLAAr~~l~~g~--~kVaLIT 213 (404)
T PRK06995 179 FALVGPTGVGKTTTTAKLAARCVMRHGA--SKVALLT 213 (404)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEE
T ss_conf 8986688876375899999999998389--8379997