HHsearch alignment for GI: peg_409 and conserved domain: PRK08084
>PRK08084 DNA replication initiation factor; Provisional.
Probab=93.32 E-value=0.18 Score=30.05 Aligned_cols=39 Identities=13% Similarity=0.246 Sum_probs=25.0
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 768887998488899679999999999824789889566776
Q 537021.9.peg.4 29 DPTRSAWVSANAGSGKTHILVQRVLRLLLANAHPSTLLCLTH 70 (242)
Q Consensus 29 ~~~~~~lV~A~aGSGKT~tL~~rv~~ll~~g~~P~~IL~lTF 70 (242)
T Consensus 43 ~~~~~l~l~G~~G~GKTHLLqA~~~~~~~~~---~~~~yl~~ 81 (235)
T PRK08084 43 EHSGYIYLWGREGAGRSHLLHAACAELSQRG---DAVGYVPL 81 (235)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHCCC---CCEEEEEH
T ss_conf 8987699989999888999999999997079---85799877